HEADER RNA BINDING PROTEIN/RNA 20-FEB-23 8G91 TITLE LAM DOMAIN OF HUMAN LARP1 IN COMPLEX WITH RP PHOSPHOROTHIOATE ISOMER TITLE 2 OF AAAAA(SRA) RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF LA-RELATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 323-410; COMPND 5 SYNONYM: LA RIBONUCLEOPROTEIN DOMAIN FAMILY MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*AP*AP*AP*AP*(SRA))-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LARP1, KIAA0731, LARP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS WINGED HELIX FOLD, RNA BINDING DOMAIN, RNA BINDING PROTEIN, RNA KEYWDS 2 BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KOZLOV,J.JIANG,K.GEHRING REVDAT 2 30-OCT-24 8G91 1 JRNL REVDAT 1 17-APR-24 8G91 0 JRNL AUTH G.KOZLOV,J.JIANG,T.RUTHERFORD,A.M.NORONHA,C.J.WILDS, JRNL AUTH 2 K.GEHRING JRNL TITL ENHANCED BINDING OF GUANYLATED POLY(A) RNA BY THE LAM DOMAIN JRNL TITL 2 OF LARP1. JRNL REF RNA BIOL. V. 21 7 2024 JRNL REFN ESSN 1555-8584 JRNL PMID 39016322 JRNL DOI 10.1080/15476286.2024.2379121 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 41809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2085 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.0600 - 2.9600 0.99 2899 147 0.1655 0.1831 REMARK 3 2 2.9600 - 2.3500 1.00 2772 116 0.1754 0.1905 REMARK 3 3 2.3500 - 2.0500 1.00 2705 148 0.1581 0.1529 REMARK 3 4 2.0500 - 1.8700 1.00 2700 132 0.1669 0.1586 REMARK 3 5 1.8700 - 1.7300 1.00 2644 149 0.1767 0.1954 REMARK 3 6 1.7300 - 1.6300 1.00 2667 151 0.1722 0.1801 REMARK 3 7 1.6300 - 1.5500 1.00 2655 134 0.1675 0.2098 REMARK 3 8 1.5500 - 1.4800 1.00 2626 153 0.1869 0.1835 REMARK 3 9 1.4800 - 1.4200 1.00 2616 147 0.1970 0.2136 REMARK 3 10 1.4200 - 1.3700 1.00 2621 149 0.1920 0.1873 REMARK 3 11 1.3700 - 1.3300 1.00 2611 143 0.1960 0.1896 REMARK 3 12 1.3300 - 1.2900 0.99 2615 146 0.2001 0.2179 REMARK 3 13 1.2900 - 1.2600 0.99 2613 123 0.2256 0.2513 REMARK 3 14 1.2600 - 1.2300 0.99 2573 138 0.3066 0.3553 REMARK 3 15 1.2300 - 1.2000 0.91 2407 109 0.4010 0.4483 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.151 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.964 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 854 REMARK 3 ANGLE : 1.171 1168 REMARK 3 CHIRALITY : 0.081 132 REMARK 3 PLANARITY : 0.008 138 REMARK 3 DIHEDRAL : 10.540 136 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 322 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.3884 -11.9419 -12.6842 REMARK 3 T TENSOR REMARK 3 T11: 0.1610 T22: 0.1098 REMARK 3 T33: 0.1520 T12: -0.0538 REMARK 3 T13: -0.0107 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.2470 L22: 0.1964 REMARK 3 L33: 0.2670 L12: -0.1984 REMARK 3 L13: -0.1740 L23: 0.0383 REMARK 3 S TENSOR REMARK 3 S11: -0.0642 S12: -0.0086 S13: -0.0711 REMARK 3 S21: -0.0384 S22: 0.0722 S23: 0.1743 REMARK 3 S31: 0.2540 S32: -0.1847 S33: -0.0034 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 345 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2095 1.6550 -6.6895 REMARK 3 T TENSOR REMARK 3 T11: 0.1160 T22: 0.1253 REMARK 3 T33: 0.1045 T12: -0.0243 REMARK 3 T13: -0.0073 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.1476 L22: 0.0457 REMARK 3 L33: 0.0789 L12: 0.0234 REMARK 3 L13: -0.0631 L23: -0.0238 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: -0.0806 S13: -0.0309 REMARK 3 S21: 0.1109 S22: -0.0207 S23: -0.0835 REMARK 3 S31: -0.0749 S32: 0.2216 S33: 0.0035 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 346 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1308 -4.1119 -19.3262 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.0990 REMARK 3 T33: 0.1158 T12: -0.0047 REMARK 3 T13: -0.0203 T23: 0.0000 REMARK 3 L TENSOR REMARK 3 L11: 0.0440 L22: 0.7105 REMARK 3 L33: 1.2047 L12: -0.0317 REMARK 3 L13: -0.1360 L23: -0.6778 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: 0.0092 S13: 0.0196 REMARK 3 S21: -0.2031 S22: -0.0053 S23: 0.0582 REMARK 3 S31: 0.1049 S32: 0.0652 S33: 0.0038 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 385 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.8582 4.4516 -15.8185 REMARK 3 T TENSOR REMARK 3 T11: 0.1297 T22: 0.1078 REMARK 3 T33: 0.1156 T12: -0.0092 REMARK 3 T13: -0.0015 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.1556 L22: 0.4793 REMARK 3 L33: 0.9263 L12: -0.1739 REMARK 3 L13: 0.3996 L23: -0.1440 REMARK 3 S TENSOR REMARK 3 S11: 0.0477 S12: 0.0496 S13: 0.0783 REMARK 3 S21: -0.0878 S22: -0.0002 S23: 0.1313 REMARK 3 S31: -0.2590 S32: -0.0979 S33: 0.0035 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -4 THROUGH -2 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8613 -8.5718 -10.4045 REMARK 3 T TENSOR REMARK 3 T11: 0.2650 T22: 0.2387 REMARK 3 T33: 0.2384 T12: 0.0509 REMARK 3 T13: -0.0393 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.0364 L22: 0.0620 REMARK 3 L33: 0.0142 L12: -0.0280 REMARK 3 L13: 0.0191 L23: -0.0383 REMARK 3 S TENSOR REMARK 3 S11: 0.0319 S12: 0.0898 S13: 0.1091 REMARK 3 S21: 0.0893 S22: -0.0212 S23: -0.4146 REMARK 3 S31: 0.0715 S32: 0.5675 S33: -0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8G91 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000272383. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95371 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41809 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M AMMONIUM ACETATE, 0.1 M BIS-TRIS REMARK 280 PH 5.5, 17% PEG 10000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.22600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.89050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.89050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.83900 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.89050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.89050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 22.61300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.89050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.89050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 67.83900 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.89050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.89050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 22.61300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 45.22600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 687 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 312 REMARK 465 GLY A 313 REMARK 465 SER A 314 REMARK 465 SER A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 A B -6 REMARK 465 A B -5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 322 OG REMARK 470 LYS A 385 CD CE NZ REMARK 470 LYS A 388 CD CE NZ REMARK 470 A B -4 P OP1 OP2 REMARK 470 A B -3 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A B -3 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 344 O HOH A 601 2.01 REMARK 500 NH2 ARG A 345 O HOH A 601 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 394 -119.80 52.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8EY6 RELATED DB: PDB REMARK 900 RELATED ID: 8EY7 RELATED DB: PDB REMARK 900 RELATED ID: 8EY8 RELATED DB: PDB REMARK 900 RELATED ID: 7SOW RELATED DB: PDB DBREF1 8G91 A 323 410 UNP LARP1-3_HUMAN DBREF2 8G91 A Q6PKG0-3 323 410 DBREF 8G91 B -6 -1 PDB 8G91 8G91 -6 -1 SEQADV 8G91 MET A 312 UNP Q6PKG0-3 INITIATING METHIONINE SEQADV 8G91 GLY A 313 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 SER A 314 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 SER A 315 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 316 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 317 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 318 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 319 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 320 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 HIS A 321 UNP Q6PKG0-3 EXPRESSION TAG SEQADV 8G91 SER A 322 UNP Q6PKG0-3 EXPRESSION TAG SEQRES 1 A 99 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN GLU SEQRES 2 A 99 LEU LEU LYS ASP TYR ILE LYS ARG GLN ILE GLU TYR TYR SEQRES 3 A 99 PHE SER VAL ASP ASN LEU GLU ARG ASP PHE PHE LEU ARG SEQRES 4 A 99 ARG LYS MET ASP ALA ASP GLY PHE LEU PRO ILE THR LEU SEQRES 5 A 99 ILE ALA SER PHE HIS ARG VAL GLN ALA LEU THR THR ASP SEQRES 6 A 99 ILE SER LEU ILE PHE ALA ALA LEU LYS ASP SER LYS VAL SEQRES 7 A 99 VAL GLU ILE VAL ASP GLU LYS VAL ARG ARG ARG GLU GLU SEQRES 8 A 99 PRO GLU LYS TRP PRO LEU PRO PRO SEQRES 1 B 6 A A A A A SRA HET SRA B -1 22 HET GOL A 501 6 HETNAM SRA ADENOSINE -5'-THIO-MONOPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SRA C10 H14 N5 O6 P S FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *106(H2 O) HELIX 1 AA1 GLN A 323 PHE A 338 1 16 HELIX 2 AA2 SER A 339 ASP A 346 1 8 HELIX 3 AA3 ASP A 346 LYS A 352 1 7 HELIX 4 AA4 ILE A 361 SER A 366 1 6 HELIX 5 AA5 PHE A 367 ALA A 372 1 6 HELIX 6 AA6 ASP A 376 LYS A 385 1 10 HELIX 7 AA7 GLU A 402 TRP A 406 5 5 SHEET 1 AA1 3 LEU A 359 PRO A 360 0 SHEET 2 AA1 3 LYS A 396 ARG A 399 -1 O VAL A 397 N LEU A 359 SHEET 3 AA1 3 VAL A 390 VAL A 393 -1 N GLU A 391 O ARG A 398 LINK O3' A B -2 P SRA B -1 1555 1555 1.56 CRYST1 53.781 53.781 90.452 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018594 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018594 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011056 0.00000