data_8GAD # _entry.id 8GAD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8GAD pdb_00008gad 10.2210/pdb8gad/pdb WWPDB D_1000272454 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-08-21 2 'Structure model' 1 1 2024-08-28 3 'Structure model' 1 2 2024-10-16 4 'Structure model' 1 3 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' audit_author 4 3 'Structure model' pdbx_entry_details 5 4 'Structure model' audit_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 3 'Structure model' '_pdbx_entry_details.has_protein_modification' 10 4 'Structure model' '_audit_author.identifier_ORCID' 11 4 'Structure model' '_audit_author.name' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8GAD _pdbx_database_status.recvd_initial_deposition_date 2023-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email agnidipta.ghosh@einsteinmed.org _pdbx_contact_author.name_first Agnidipta _pdbx_contact_author.name_last Ghosh _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7753-0240 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yang, W.' 1 0000-0003-0637-6327 'Almo, S.C.' 2 0000-0003-2591-5234 'Baker, D.' 3 0000-0001-7896-6217 'Ghosh, A.' 4 0000-0002-7753-0240 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Design of High Affinity Binders to Convex Protein Target Sites.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2024.05.01.592114 _citation.pdbx_database_id_PubMed 38746206 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, W.' 1 ? primary 'Hicks, D.R.' 2 ? primary 'Ghosh, A.' 3 ? primary 'Schwartze, T.A.' 4 ? primary 'Conventry, B.' 5 ? primary 'Goreshnik, I.' 6 ? primary 'Allen, A.' 7 ? primary 'Halabiya, S.F.' 8 ? primary 'Kim, C.J.' 9 ? primary 'Hinck, C.S.' 10 ? primary 'Lee, D.S.' 11 ? primary 'Bera, A.K.' 12 ? primary 'Li, Z.' 13 ? primary 'Wang, Y.' 14 ? primary 'Schlichthaerle, T.' 15 ? primary 'Cao, L.' 16 ? primary 'Huang, B.' 17 ? primary 'Garrett, S.' 18 ? primary 'Gerben, S.R.' 19 ? primary 'Rettie, S.' 20 ? primary 'Heine, P.' 21 ? primary 'Murray, A.' 22 ? primary 'Edman, N.' 23 ? primary 'Carter, L.' 24 ? primary 'Stewart, L.' 25 ? primary 'Almo, S.' 26 ? primary 'Hinck, A.P.' 27 ? primary 'Baker, D.' 28 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PD-L1 binder' 11706.420 2 ? ? ? ? 2 non-polymer syn INDOLE 117.148 1 ? ? ? ? 3 water nat water 18.015 103 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMEEEIEEAYDLVEEAEKTGDTSLLKKAKELLDKVAEEATKSGNPILLIRVIIILIKIVRNSGDPSVAALARELLEKLEE IAEKEGNRFIEAMGEALRTQIERAL ; _entity_poly.pdbx_seq_one_letter_code_can ;SMEEEIEEAYDLVEEAEKTGDTSLLKKAKELLDKVAEEATKSGNPILLIRVIIILIKIVRNSGDPSVAALARELLEKLEE IAEKEGNRFIEAMGEALRTQIERAL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 INDOLE IND 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLU n 1 4 GLU n 1 5 GLU n 1 6 ILE n 1 7 GLU n 1 8 GLU n 1 9 ALA n 1 10 TYR n 1 11 ASP n 1 12 LEU n 1 13 VAL n 1 14 GLU n 1 15 GLU n 1 16 ALA n 1 17 GLU n 1 18 LYS n 1 19 THR n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 SER n 1 24 LEU n 1 25 LEU n 1 26 LYS n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 GLU n 1 31 LEU n 1 32 LEU n 1 33 ASP n 1 34 LYS n 1 35 VAL n 1 36 ALA n 1 37 GLU n 1 38 GLU n 1 39 ALA n 1 40 THR n 1 41 LYS n 1 42 SER n 1 43 GLY n 1 44 ASN n 1 45 PRO n 1 46 ILE n 1 47 LEU n 1 48 LEU n 1 49 ILE n 1 50 ARG n 1 51 VAL n 1 52 ILE n 1 53 ILE n 1 54 ILE n 1 55 LEU n 1 56 ILE n 1 57 LYS n 1 58 ILE n 1 59 VAL n 1 60 ARG n 1 61 ASN n 1 62 SER n 1 63 GLY n 1 64 ASP n 1 65 PRO n 1 66 SER n 1 67 VAL n 1 68 ALA n 1 69 ALA n 1 70 LEU n 1 71 ALA n 1 72 ARG n 1 73 GLU n 1 74 LEU n 1 75 LEU n 1 76 GLU n 1 77 LYS n 1 78 LEU n 1 79 GLU n 1 80 GLU n 1 81 ILE n 1 82 ALA n 1 83 GLU n 1 84 LYS n 1 85 GLU n 1 86 GLY n 1 87 ASN n 1 88 ARG n 1 89 PHE n 1 90 ILE n 1 91 GLU n 1 92 ALA n 1 93 MET n 1 94 GLY n 1 95 GLU n 1 96 ALA n 1 97 LEU n 1 98 ARG n 1 99 THR n 1 100 GLN n 1 101 ILE n 1 102 GLU n 1 103 ARG n 1 104 ALA n 1 105 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 105 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type bacterial _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET29 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IND non-polymer . INDOLE ? 'C8 H7 N' 117.148 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 ALA 9 8 8 ALA ALA A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 ASP 11 10 10 ASP ASP A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 GLU 14 13 13 GLU GLU A . n A 1 15 GLU 15 14 14 GLU GLU A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 LYS 18 17 17 LYS LYS A . n A 1 19 THR 19 18 18 THR THR A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 ASP 21 20 20 ASP ASP A . n A 1 22 THR 22 21 21 THR THR A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 LYS 26 25 25 LYS LYS A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 LYS 29 28 28 LYS LYS A . n A 1 30 GLU 30 29 29 GLU GLU A . n A 1 31 LEU 31 30 30 LEU LEU A . n A 1 32 LEU 32 31 31 LEU LEU A . n A 1 33 ASP 33 32 32 ASP ASP A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 GLU 37 36 36 GLU GLU A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 THR 40 39 39 THR THR A . n A 1 41 LYS 41 40 40 LYS LYS A . n A 1 42 SER 42 41 41 SER SER A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 PRO 45 44 44 PRO PRO A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 ARG 50 49 49 ARG ARG A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 ILE 53 52 52 ILE ILE A . n A 1 54 ILE 54 53 53 ILE ILE A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 LYS 57 56 56 LYS LYS A . n A 1 58 ILE 58 57 57 ILE ILE A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 ASN 61 60 60 ASN ASN A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 ASP 64 63 63 ASP ASP A . n A 1 65 PRO 65 64 64 PRO PRO A . n A 1 66 SER 66 65 65 SER SER A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 ALA 71 70 70 ALA ALA A . n A 1 72 ARG 72 71 71 ARG ARG A . n A 1 73 GLU 73 72 72 GLU GLU A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 ILE 81 80 80 ILE ILE A . n A 1 82 ALA 82 81 81 ALA ALA A . n A 1 83 GLU 83 82 82 GLU GLU A . n A 1 84 LYS 84 83 83 LYS LYS A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 PHE 89 88 88 PHE PHE A . n A 1 90 ILE 90 89 89 ILE ILE A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 ALA 92 91 91 ALA ALA A . n A 1 93 MET 93 92 92 MET MET A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 GLU 95 94 94 GLU GLU A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 ARG 98 97 97 ARG ARG A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 GLN 100 99 99 GLN GLN A . n A 1 101 ILE 101 100 100 ILE ILE A . n A 1 102 GLU 102 101 101 GLU GLU A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 LEU 105 104 104 LEU LEU A . n B 1 1 SER 1 0 ? ? ? B . n B 1 2 MET 2 1 1 MET MET B . n B 1 3 GLU 3 2 2 GLU GLU B . n B 1 4 GLU 4 3 3 GLU GLU B . n B 1 5 GLU 5 4 4 GLU GLU B . n B 1 6 ILE 6 5 5 ILE ILE B . n B 1 7 GLU 7 6 6 GLU GLU B . n B 1 8 GLU 8 7 7 GLU GLU B . n B 1 9 ALA 9 8 8 ALA ALA B . n B 1 10 TYR 10 9 9 TYR TYR B . n B 1 11 ASP 11 10 10 ASP ASP B . n B 1 12 LEU 12 11 11 LEU LEU B . n B 1 13 VAL 13 12 12 VAL VAL B . n B 1 14 GLU 14 13 13 GLU GLU B . n B 1 15 GLU 15 14 14 GLU GLU B . n B 1 16 ALA 16 15 15 ALA ALA B . n B 1 17 GLU 17 16 16 GLU GLU B . n B 1 18 LYS 18 17 17 LYS LYS B . n B 1 19 THR 19 18 18 THR THR B . n B 1 20 GLY 20 19 19 GLY GLY B . n B 1 21 ASP 21 20 20 ASP ASP B . n B 1 22 THR 22 21 21 THR THR B . n B 1 23 SER 23 22 22 SER SER B . n B 1 24 LEU 24 23 23 LEU LEU B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 LYS 26 25 25 LYS LYS B . n B 1 27 LYS 27 26 26 LYS LYS B . n B 1 28 ALA 28 27 27 ALA ALA B . n B 1 29 LYS 29 28 28 LYS LYS B . n B 1 30 GLU 30 29 29 GLU GLU B . n B 1 31 LEU 31 30 30 LEU LEU B . n B 1 32 LEU 32 31 31 LEU LEU B . n B 1 33 ASP 33 32 32 ASP ASP B . n B 1 34 LYS 34 33 33 LYS LYS B . n B 1 35 VAL 35 34 34 VAL VAL B . n B 1 36 ALA 36 35 35 ALA ALA B . n B 1 37 GLU 37 36 36 GLU GLU B . n B 1 38 GLU 38 37 37 GLU GLU B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 THR 40 39 39 THR THR B . n B 1 41 LYS 41 40 40 LYS LYS B . n B 1 42 SER 42 41 41 SER SER B . n B 1 43 GLY 43 42 42 GLY GLY B . n B 1 44 ASN 44 43 43 ASN ASN B . n B 1 45 PRO 45 44 44 PRO PRO B . n B 1 46 ILE 46 45 45 ILE ILE B . n B 1 47 LEU 47 46 46 LEU LEU B . n B 1 48 LEU 48 47 47 LEU LEU B . n B 1 49 ILE 49 48 48 ILE ILE B . n B 1 50 ARG 50 49 49 ARG ARG B . n B 1 51 VAL 51 50 50 VAL VAL B . n B 1 52 ILE 52 51 51 ILE ILE B . n B 1 53 ILE 53 52 52 ILE ILE B . n B 1 54 ILE 54 53 53 ILE ILE B . n B 1 55 LEU 55 54 54 LEU LEU B . n B 1 56 ILE 56 55 55 ILE ILE B . n B 1 57 LYS 57 56 56 LYS LYS B . n B 1 58 ILE 58 57 57 ILE ILE B . n B 1 59 VAL 59 58 58 VAL VAL B . n B 1 60 ARG 60 59 59 ARG ARG B . n B 1 61 ASN 61 60 60 ASN ASN B . n B 1 62 SER 62 61 61 SER SER B . n B 1 63 GLY 63 62 62 GLY GLY B . n B 1 64 ASP 64 63 63 ASP ASP B . n B 1 65 PRO 65 64 64 PRO PRO B . n B 1 66 SER 66 65 65 SER SER B . n B 1 67 VAL 67 66 66 VAL VAL B . n B 1 68 ALA 68 67 67 ALA ALA B . n B 1 69 ALA 69 68 68 ALA ALA B . n B 1 70 LEU 70 69 69 LEU LEU B . n B 1 71 ALA 71 70 70 ALA ALA B . n B 1 72 ARG 72 71 71 ARG ARG B . n B 1 73 GLU 73 72 72 GLU GLU B . n B 1 74 LEU 74 73 73 LEU LEU B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 GLU 76 75 75 GLU GLU B . n B 1 77 LYS 77 76 76 LYS LYS B . n B 1 78 LEU 78 77 77 LEU LEU B . n B 1 79 GLU 79 78 78 GLU GLU B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 ILE 81 80 80 ILE ILE B . n B 1 82 ALA 82 81 81 ALA ALA B . n B 1 83 GLU 83 82 82 GLU GLU B . n B 1 84 LYS 84 83 83 LYS LYS B . n B 1 85 GLU 85 84 84 GLU GLU B . n B 1 86 GLY 86 85 85 GLY GLY B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 ARG 88 87 87 ARG ARG B . n B 1 89 PHE 89 88 88 PHE PHE B . n B 1 90 ILE 90 89 89 ILE ILE B . n B 1 91 GLU 91 90 90 GLU GLU B . n B 1 92 ALA 92 91 91 ALA ALA B . n B 1 93 MET 93 92 92 MET MET B . n B 1 94 GLY 94 93 93 GLY GLY B . n B 1 95 GLU 95 94 94 GLU GLU B . n B 1 96 ALA 96 95 95 ALA ALA B . n B 1 97 LEU 97 96 96 LEU LEU B . n B 1 98 ARG 98 97 97 ARG ARG B . n B 1 99 THR 99 98 98 THR THR B . n B 1 100 GLN 100 99 99 GLN GLN B . n B 1 101 ILE 101 100 100 ILE ILE B . n B 1 102 GLU 102 101 101 GLU GLU B . n B 1 103 ARG 103 102 102 ARG ARG B . n B 1 104 ALA 104 103 103 ALA ALA B . n B 1 105 LEU 105 104 104 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IND 1 201 201 IND UNK A . D 3 HOH 1 301 82 HOH HOH A . D 3 HOH 2 302 98 HOH HOH A . D 3 HOH 3 303 41 HOH HOH A . D 3 HOH 4 304 6 HOH HOH A . D 3 HOH 5 305 95 HOH HOH A . D 3 HOH 6 306 34 HOH HOH A . D 3 HOH 7 307 9 HOH HOH A . D 3 HOH 8 308 31 HOH HOH A . D 3 HOH 9 309 64 HOH HOH A . D 3 HOH 10 310 16 HOH HOH A . D 3 HOH 11 311 28 HOH HOH A . D 3 HOH 12 312 60 HOH HOH A . D 3 HOH 13 313 29 HOH HOH A . D 3 HOH 14 314 14 HOH HOH A . D 3 HOH 15 315 83 HOH HOH A . D 3 HOH 16 316 44 HOH HOH A . D 3 HOH 17 317 2 HOH HOH A . D 3 HOH 18 318 48 HOH HOH A . D 3 HOH 19 319 35 HOH HOH A . D 3 HOH 20 320 4 HOH HOH A . D 3 HOH 21 321 5 HOH HOH A . D 3 HOH 22 322 102 HOH HOH A . D 3 HOH 23 323 25 HOH HOH A . D 3 HOH 24 324 84 HOH HOH A . D 3 HOH 25 325 18 HOH HOH A . D 3 HOH 26 326 58 HOH HOH A . D 3 HOH 27 327 15 HOH HOH A . D 3 HOH 28 328 19 HOH HOH A . D 3 HOH 29 329 61 HOH HOH A . D 3 HOH 30 330 3 HOH HOH A . D 3 HOH 31 331 43 HOH HOH A . D 3 HOH 32 332 46 HOH HOH A . D 3 HOH 33 333 76 HOH HOH A . D 3 HOH 34 334 38 HOH HOH A . D 3 HOH 35 335 99 HOH HOH A . D 3 HOH 36 336 68 HOH HOH A . D 3 HOH 37 337 42 HOH HOH A . D 3 HOH 38 338 55 HOH HOH A . D 3 HOH 39 339 47 HOH HOH A . D 3 HOH 40 340 100 HOH HOH A . D 3 HOH 41 341 69 HOH HOH A . D 3 HOH 42 342 36 HOH HOH A . D 3 HOH 43 343 50 HOH HOH A . D 3 HOH 44 344 52 HOH HOH A . D 3 HOH 45 345 71 HOH HOH A . D 3 HOH 46 346 21 HOH HOH A . D 3 HOH 47 347 87 HOH HOH A . D 3 HOH 48 348 78 HOH HOH A . D 3 HOH 49 349 79 HOH HOH A . D 3 HOH 50 350 81 HOH HOH A . D 3 HOH 51 351 101 HOH HOH A . D 3 HOH 52 352 75 HOH HOH A . D 3 HOH 53 353 40 HOH HOH A . D 3 HOH 54 354 45 HOH HOH A . D 3 HOH 55 355 70 HOH HOH A . E 3 HOH 1 201 85 HOH HOH B . E 3 HOH 2 202 89 HOH HOH B . E 3 HOH 3 203 88 HOH HOH B . E 3 HOH 4 204 62 HOH HOH B . E 3 HOH 5 205 59 HOH HOH B . E 3 HOH 6 206 12 HOH HOH B . E 3 HOH 7 207 49 HOH HOH B . E 3 HOH 8 208 63 HOH HOH B . E 3 HOH 9 209 30 HOH HOH B . E 3 HOH 10 210 53 HOH HOH B . E 3 HOH 11 211 56 HOH HOH B . E 3 HOH 12 212 86 HOH HOH B . E 3 HOH 13 213 20 HOH HOH B . E 3 HOH 14 214 10 HOH HOH B . E 3 HOH 15 215 65 HOH HOH B . E 3 HOH 16 216 72 HOH HOH B . E 3 HOH 17 217 103 HOH HOH B . E 3 HOH 18 218 1 HOH HOH B . E 3 HOH 19 219 22 HOH HOH B . E 3 HOH 20 220 32 HOH HOH B . E 3 HOH 21 221 8 HOH HOH B . E 3 HOH 22 222 23 HOH HOH B . E 3 HOH 23 223 26 HOH HOH B . E 3 HOH 24 224 17 HOH HOH B . E 3 HOH 25 225 33 HOH HOH B . E 3 HOH 26 226 37 HOH HOH B . E 3 HOH 27 227 54 HOH HOH B . E 3 HOH 28 228 91 HOH HOH B . E 3 HOH 29 229 77 HOH HOH B . E 3 HOH 30 230 57 HOH HOH B . E 3 HOH 31 231 90 HOH HOH B . E 3 HOH 32 232 11 HOH HOH B . E 3 HOH 33 233 66 HOH HOH B . E 3 HOH 34 234 24 HOH HOH B . E 3 HOH 35 235 93 HOH HOH B . E 3 HOH 36 236 7 HOH HOH B . E 3 HOH 37 237 13 HOH HOH B . E 3 HOH 38 238 39 HOH HOH B . E 3 HOH 39 239 97 HOH HOH B . E 3 HOH 40 240 73 HOH HOH B . E 3 HOH 41 241 92 HOH HOH B . E 3 HOH 42 242 27 HOH HOH B . E 3 HOH 43 243 80 HOH HOH B . E 3 HOH 44 244 51 HOH HOH B . E 3 HOH 45 245 96 HOH HOH B . E 3 HOH 46 246 67 HOH HOH B . E 3 HOH 47 247 74 HOH HOH B . E 3 HOH 48 248 94 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8GAD _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.242 _cell.length_a_esd ? _cell.length_b 67.242 _cell.length_b_esd ? _cell.length_c 101.902 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8GAD _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8GAD _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.47 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.18 _exptl_crystal.description 'Hexagonal rods' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '22.5% (w/v) PEG 3350, 0.08 M Bis-Tris and 2% (v/v) Ethylene glycol' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 292 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-12-16 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.92 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-1 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8GAD _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.88 _reflns.d_resolution_low 19.62 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19563 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 27.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.01 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.052 _reflns.pdbx_Rpim_I_all 0.014 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 282139 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.050 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.88 _reflns_shell.d_res_low 1.93 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all 17768 _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1218 _reflns_shell.percent_possible_obs 98.8 _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 14.6 _reflns_shell.pdbx_chi_squared 1.06 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs 3.9 _reflns_shell.pdbx_Rrim_I_all 0.823 _reflns_shell.pdbx_Rpim_I_all 0.212 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.871 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.794 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8GAD _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.88 _refine.ls_d_res_low 19.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19507 _refine.ls_number_reflns_R_free 984 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.92 _refine.ls_percent_reflns_R_free 5.04 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1896 _refine.ls_R_factor_R_free 0.2116 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1884 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.38 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.18 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.88 _refine_hist.d_res_low 19.62 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 1744 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1632 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.881 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 4.185 ? 235 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.047 ? 267 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 287 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.88 1.98 . . 146 2573 99.00 . . . . 0.2442 . . . . . . . . . . . 0.2886 'X-RAY DIFFRACTION' 1.98 2.11 . . 139 2593 100.00 . . . . 0.2148 . . . . . . . . . . . 0.2563 'X-RAY DIFFRACTION' 2.11 2.27 . . 140 2592 100.00 . . . . 0.1977 . . . . . . . . . . . 0.2819 'X-RAY DIFFRACTION' 2.27 2.50 . . 142 2624 100.00 . . . . 0.1987 . . . . . . . . . . . 0.2308 'X-RAY DIFFRACTION' 2.50 2.86 . . 119 2646 100.00 . . . . 0.2084 . . . . . . . . . . . 0.2268 'X-RAY DIFFRACTION' 2.86 3.60 . . 146 2671 100.00 . . . . 0.1949 . . . . . . . . . . . 0.2355 'X-RAY DIFFRACTION' 3.60 19.62 . . 152 2824 100.00 . . . . 0.1681 . . . . . . . . . . . 0.1702 # _struct.entry_id 8GAD _struct.title 'Crystal structure of a high affinity PD-L1 binder' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8GAD _struct_keywords.text 'De novo protein design, high affinity binder, PD-L1, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8GAD _struct_ref.pdbx_db_accession 8GAD _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8GAD A 1 ? 105 ? 8GAD 0 ? 104 ? 0 104 2 1 8GAD B 1 ? 105 ? 8GAD 0 ? 104 ? 0 104 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1750 ? 1 MORE -9 ? 1 'SSA (A^2)' 10680 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Superdex S200' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 1 ? GLY A 20 ? SER A 0 GLY A 19 1 ? 20 HELX_P HELX_P2 AA2 THR A 22 ? GLY A 43 ? THR A 21 GLY A 42 1 ? 22 HELX_P HELX_P3 AA3 ASN A 44 ? GLY A 63 ? ASN A 43 GLY A 62 1 ? 20 HELX_P HELX_P4 AA4 ASP A 64 ? GLY A 86 ? ASP A 63 GLY A 85 1 ? 23 HELX_P HELX_P5 AA5 ASN A 87 ? ARG A 103 ? ASN A 86 ARG A 102 1 ? 17 HELX_P HELX_P6 AA6 GLU B 3 ? GLY B 20 ? GLU B 2 GLY B 19 1 ? 18 HELX_P HELX_P7 AA7 ASP B 21 ? GLY B 43 ? ASP B 20 GLY B 42 1 ? 23 HELX_P HELX_P8 AA8 ASN B 44 ? GLY B 63 ? ASN B 43 GLY B 62 1 ? 20 HELX_P HELX_P9 AA9 ASP B 64 ? GLY B 86 ? ASP B 63 GLY B 85 1 ? 23 HELX_P HELX_P10 AB1 ASN B 87 ? LEU B 105 ? ASN B 86 LEU B 104 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _pdbx_entry_details.entry_id 8GAD _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 340 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -21.3672 -4.8392 2.2876 0.2838 ? -0.0227 ? -0.0245 ? 0.2830 ? -0.0520 ? 0.2040 ? 6.4927 ? 2.6943 ? 0.0567 ? 5.2652 ? -0.0010 ? 3.1563 ? -0.0399 ? -0.3058 ? -0.1032 ? -0.1022 ? 0.1647 ? -0.1416 ? -0.0306 ? 0.0703 ? -0.1762 ? 2 'X-RAY DIFFRACTION' ? refined -28.6395 -7.9859 -2.6006 0.2625 ? -0.0178 ? -0.0391 ? 0.2127 ? 0.0097 ? 0.3018 ? 6.8199 ? 0.8377 ? -1.1084 ? 2.8563 ? 0.3198 ? 4.1657 ? 0.0641 ? -0.1180 ? -0.0107 ? -0.1447 ? -0.0330 ? -0.3435 ? 0.1995 ? 0.2761 ? -0.0661 ? 3 'X-RAY DIFFRACTION' ? refined -32.9071 -17.9943 -0.7210 0.3876 ? 0.0387 ? -0.0278 ? 0.3028 ? 0.0829 ? 0.4331 ? 5.4538 ? 3.7603 ? -5.6126 ? 6.1908 ? -3.7008 ? 7.8275 ? -0.4313 ? -0.4664 ? -1.8239 ? -0.2513 ? -0.1836 ? -0.2900 ? 0.8204 ? 0.1827 ? 0.5000 ? 4 'X-RAY DIFFRACTION' ? refined -38.6607 -12.5223 -6.7918 0.3202 ? -0.0090 ? -0.0213 ? 0.2744 ? -0.0031 ? 0.3497 ? 7.7882 ? 0.8731 ? -5.8035 ? 2.6529 ? -1.4382 ? 9.3166 ? -0.4464 ? 0.2970 ? -0.5238 ? -0.2437 ? 0.0620 ? -0.0568 ? 0.7067 ? -0.1046 ? 0.3181 ? 5 'X-RAY DIFFRACTION' ? refined -58.5249 -12.7585 -1.6133 0.2314 ? -0.0285 ? 0.0625 ? 0.3424 ? 0.0133 ? 0.2904 ? 7.9948 ? 1.8282 ? 0.7840 ? 7.8890 ? 0.9432 ? 8.9467 ? -0.0148 ? -0.2852 ? -0.0090 ? 0.5531 ? -0.1926 ? -0.1353 ? 0.9944 ? -0.0856 ? 0.1894 ? 6 'X-RAY DIFFRACTION' ? refined -55.0288 -3.7991 -3.3891 0.2705 ? 0.0148 ? 0.0100 ? 0.2568 ? 0.0459 ? 0.2956 ? 7.5137 ? 4.2088 ? 1.5255 ? 4.0033 ? -0.1508 ? 2.3004 ? -0.0866 ? 0.0470 ? 0.6511 ? -0.0801 ? 0.0837 ? 0.5148 ? -0.1044 ? -0.3157 ? 0.0143 ? 7 'X-RAY DIFFRACTION' ? refined -46.4209 4.6080 -6.3455 0.3940 ? 0.0552 ? 0.0073 ? 0.3621 ? 0.0928 ? 0.3904 ? 5.5294 ? 5.1020 ? 4.2815 ? 6.4993 ? 4.3432 ? 3.5232 ? -0.6162 ? 0.7354 ? 1.4448 ? -0.7490 ? 0.3959 ? 0.7792 ? -0.9273 ? 0.2511 ? 0.2179 ? 8 'X-RAY DIFFRACTION' ? refined -39.8702 -2.5119 -8.3333 0.2970 ? -0.0156 ? 0.0511 ? 0.2929 ? 0.0284 ? 0.3021 ? 7.2409 ? 3.1925 ? 1.3919 ? 7.2966 ? 1.8878 ? 9.0819 ? -0.4792 ? 0.7771 ? 0.2688 ? -0.8612 ? 0.3928 ? 0.1011 ? -0.4815 ? 0.0937 ? -0.0950 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 0 through 41 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 42 through 63 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 64 through 84 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 85 through 104 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 20 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 21 through 63 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 64 through 84 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 85 through 104 ) ; # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 0 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HOH O O N N 123 HOH H1 H N N 124 HOH H2 H N N 125 ILE N N N N 126 ILE CA C N S 127 ILE C C N N 128 ILE O O N N 129 ILE CB C N S 130 ILE CG1 C N N 131 ILE CG2 C N N 132 ILE CD1 C N N 133 ILE OXT O N N 134 ILE H H N N 135 ILE H2 H N N 136 ILE HA H N N 137 ILE HB H N N 138 ILE HG12 H N N 139 ILE HG13 H N N 140 ILE HG21 H N N 141 ILE HG22 H N N 142 ILE HG23 H N N 143 ILE HD11 H N N 144 ILE HD12 H N N 145 ILE HD13 H N N 146 ILE HXT H N N 147 IND N1 N Y N 148 IND C2 C Y N 149 IND C3 C Y N 150 IND C4 C Y N 151 IND C5 C Y N 152 IND C6 C Y N 153 IND C7 C Y N 154 IND C8 C Y N 155 IND C9 C Y N 156 IND HN1 H N N 157 IND H2 H N N 158 IND H3 H N N 159 IND H4 H N N 160 IND H5 H N N 161 IND H6 H N N 162 IND H7 H N N 163 LEU N N N N 164 LEU CA C N S 165 LEU C C N N 166 LEU O O N N 167 LEU CB C N N 168 LEU CG C N N 169 LEU CD1 C N N 170 LEU CD2 C N N 171 LEU OXT O N N 172 LEU H H N N 173 LEU H2 H N N 174 LEU HA H N N 175 LEU HB2 H N N 176 LEU HB3 H N N 177 LEU HG H N N 178 LEU HD11 H N N 179 LEU HD12 H N N 180 LEU HD13 H N N 181 LEU HD21 H N N 182 LEU HD22 H N N 183 LEU HD23 H N N 184 LEU HXT H N N 185 LYS N N N N 186 LYS CA C N S 187 LYS C C N N 188 LYS O O N N 189 LYS CB C N N 190 LYS CG C N N 191 LYS CD C N N 192 LYS CE C N N 193 LYS NZ N N N 194 LYS OXT O N N 195 LYS H H N N 196 LYS H2 H N N 197 LYS HA H N N 198 LYS HB2 H N N 199 LYS HB3 H N N 200 LYS HG2 H N N 201 LYS HG3 H N N 202 LYS HD2 H N N 203 LYS HD3 H N N 204 LYS HE2 H N N 205 LYS HE3 H N N 206 LYS HZ1 H N N 207 LYS HZ2 H N N 208 LYS HZ3 H N N 209 LYS HXT H N N 210 MET N N N N 211 MET CA C N S 212 MET C C N N 213 MET O O N N 214 MET CB C N N 215 MET CG C N N 216 MET SD S N N 217 MET CE C N N 218 MET OXT O N N 219 MET H H N N 220 MET H2 H N N 221 MET HA H N N 222 MET HB2 H N N 223 MET HB3 H N N 224 MET HG2 H N N 225 MET HG3 H N N 226 MET HE1 H N N 227 MET HE2 H N N 228 MET HE3 H N N 229 MET HXT H N N 230 PHE N N N N 231 PHE CA C N S 232 PHE C C N N 233 PHE O O N N 234 PHE CB C N N 235 PHE CG C Y N 236 PHE CD1 C Y N 237 PHE CD2 C Y N 238 PHE CE1 C Y N 239 PHE CE2 C Y N 240 PHE CZ C Y N 241 PHE OXT O N N 242 PHE H H N N 243 PHE H2 H N N 244 PHE HA H N N 245 PHE HB2 H N N 246 PHE HB3 H N N 247 PHE HD1 H N N 248 PHE HD2 H N N 249 PHE HE1 H N N 250 PHE HE2 H N N 251 PHE HZ H N N 252 PHE HXT H N N 253 PRO N N N N 254 PRO CA C N S 255 PRO C C N N 256 PRO O O N N 257 PRO CB C N N 258 PRO CG C N N 259 PRO CD C N N 260 PRO OXT O N N 261 PRO H H N N 262 PRO HA H N N 263 PRO HB2 H N N 264 PRO HB3 H N N 265 PRO HG2 H N N 266 PRO HG3 H N N 267 PRO HD2 H N N 268 PRO HD3 H N N 269 PRO HXT H N N 270 SER N N N N 271 SER CA C N S 272 SER C C N N 273 SER O O N N 274 SER CB C N N 275 SER OG O N N 276 SER OXT O N N 277 SER H H N N 278 SER H2 H N N 279 SER HA H N N 280 SER HB2 H N N 281 SER HB3 H N N 282 SER HG H N N 283 SER HXT H N N 284 THR N N N N 285 THR CA C N S 286 THR C C N N 287 THR O O N N 288 THR CB C N R 289 THR OG1 O N N 290 THR CG2 C N N 291 THR OXT O N N 292 THR H H N N 293 THR H2 H N N 294 THR HA H N N 295 THR HB H N N 296 THR HG1 H N N 297 THR HG21 H N N 298 THR HG22 H N N 299 THR HG23 H N N 300 THR HXT H N N 301 TYR N N N N 302 TYR CA C N S 303 TYR C C N N 304 TYR O O N N 305 TYR CB C N N 306 TYR CG C Y N 307 TYR CD1 C Y N 308 TYR CD2 C Y N 309 TYR CE1 C Y N 310 TYR CE2 C Y N 311 TYR CZ C Y N 312 TYR OH O N N 313 TYR OXT O N N 314 TYR H H N N 315 TYR H2 H N N 316 TYR HA H N N 317 TYR HB2 H N N 318 TYR HB3 H N N 319 TYR HD1 H N N 320 TYR HD2 H N N 321 TYR HE1 H N N 322 TYR HE2 H N N 323 TYR HH H N N 324 TYR HXT H N N 325 VAL N N N N 326 VAL CA C N S 327 VAL C C N N 328 VAL O O N N 329 VAL CB C N N 330 VAL CG1 C N N 331 VAL CG2 C N N 332 VAL OXT O N N 333 VAL H H N N 334 VAL H2 H N N 335 VAL HA H N N 336 VAL HB H N N 337 VAL HG11 H N N 338 VAL HG12 H N N 339 VAL HG13 H N N 340 VAL HG21 H N N 341 VAL HG22 H N N 342 VAL HG23 H N N 343 VAL HXT H N N 344 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 IND N1 C2 sing Y N 139 IND N1 C8 sing Y N 140 IND N1 HN1 sing N N 141 IND C2 C3 doub Y N 142 IND C2 H2 sing N N 143 IND C3 C9 sing Y N 144 IND C3 H3 sing N N 145 IND C4 C5 doub Y N 146 IND C4 C9 sing Y N 147 IND C4 H4 sing N N 148 IND C5 C6 sing Y N 149 IND C5 H5 sing N N 150 IND C6 C7 doub Y N 151 IND C6 H6 sing N N 152 IND C7 C8 sing Y N 153 IND C7 H7 sing N N 154 IND C8 C9 doub Y N 155 LEU N CA sing N N 156 LEU N H sing N N 157 LEU N H2 sing N N 158 LEU CA C sing N N 159 LEU CA CB sing N N 160 LEU CA HA sing N N 161 LEU C O doub N N 162 LEU C OXT sing N N 163 LEU CB CG sing N N 164 LEU CB HB2 sing N N 165 LEU CB HB3 sing N N 166 LEU CG CD1 sing N N 167 LEU CG CD2 sing N N 168 LEU CG HG sing N N 169 LEU CD1 HD11 sing N N 170 LEU CD1 HD12 sing N N 171 LEU CD1 HD13 sing N N 172 LEU CD2 HD21 sing N N 173 LEU CD2 HD22 sing N N 174 LEU CD2 HD23 sing N N 175 LEU OXT HXT sing N N 176 LYS N CA sing N N 177 LYS N H sing N N 178 LYS N H2 sing N N 179 LYS CA C sing N N 180 LYS CA CB sing N N 181 LYS CA HA sing N N 182 LYS C O doub N N 183 LYS C OXT sing N N 184 LYS CB CG sing N N 185 LYS CB HB2 sing N N 186 LYS CB HB3 sing N N 187 LYS CG CD sing N N 188 LYS CG HG2 sing N N 189 LYS CG HG3 sing N N 190 LYS CD CE sing N N 191 LYS CD HD2 sing N N 192 LYS CD HD3 sing N N 193 LYS CE NZ sing N N 194 LYS CE HE2 sing N N 195 LYS CE HE3 sing N N 196 LYS NZ HZ1 sing N N 197 LYS NZ HZ2 sing N N 198 LYS NZ HZ3 sing N N 199 LYS OXT HXT sing N N 200 MET N CA sing N N 201 MET N H sing N N 202 MET N H2 sing N N 203 MET CA C sing N N 204 MET CA CB sing N N 205 MET CA HA sing N N 206 MET C O doub N N 207 MET C OXT sing N N 208 MET CB CG sing N N 209 MET CB HB2 sing N N 210 MET CB HB3 sing N N 211 MET CG SD sing N N 212 MET CG HG2 sing N N 213 MET CG HG3 sing N N 214 MET SD CE sing N N 215 MET CE HE1 sing N N 216 MET CE HE2 sing N N 217 MET CE HE3 sing N N 218 MET OXT HXT sing N N 219 PHE N CA sing N N 220 PHE N H sing N N 221 PHE N H2 sing N N 222 PHE CA C sing N N 223 PHE CA CB sing N N 224 PHE CA HA sing N N 225 PHE C O doub N N 226 PHE C OXT sing N N 227 PHE CB CG sing N N 228 PHE CB HB2 sing N N 229 PHE CB HB3 sing N N 230 PHE CG CD1 doub Y N 231 PHE CG CD2 sing Y N 232 PHE CD1 CE1 sing Y N 233 PHE CD1 HD1 sing N N 234 PHE CD2 CE2 doub Y N 235 PHE CD2 HD2 sing N N 236 PHE CE1 CZ doub Y N 237 PHE CE1 HE1 sing N N 238 PHE CE2 CZ sing Y N 239 PHE CE2 HE2 sing N N 240 PHE CZ HZ sing N N 241 PHE OXT HXT sing N N 242 PRO N CA sing N N 243 PRO N CD sing N N 244 PRO N H sing N N 245 PRO CA C sing N N 246 PRO CA CB sing N N 247 PRO CA HA sing N N 248 PRO C O doub N N 249 PRO C OXT sing N N 250 PRO CB CG sing N N 251 PRO CB HB2 sing N N 252 PRO CB HB3 sing N N 253 PRO CG CD sing N N 254 PRO CG HG2 sing N N 255 PRO CG HG3 sing N N 256 PRO CD HD2 sing N N 257 PRO CD HD3 sing N N 258 PRO OXT HXT sing N N 259 SER N CA sing N N 260 SER N H sing N N 261 SER N H2 sing N N 262 SER CA C sing N N 263 SER CA CB sing N N 264 SER CA HA sing N N 265 SER C O doub N N 266 SER C OXT sing N N 267 SER CB OG sing N N 268 SER CB HB2 sing N N 269 SER CB HB3 sing N N 270 SER OG HG sing N N 271 SER OXT HXT sing N N 272 THR N CA sing N N 273 THR N H sing N N 274 THR N H2 sing N N 275 THR CA C sing N N 276 THR CA CB sing N N 277 THR CA HA sing N N 278 THR C O doub N N 279 THR C OXT sing N N 280 THR CB OG1 sing N N 281 THR CB CG2 sing N N 282 THR CB HB sing N N 283 THR OG1 HG1 sing N N 284 THR CG2 HG21 sing N N 285 THR CG2 HG22 sing N N 286 THR CG2 HG23 sing N N 287 THR OXT HXT sing N N 288 TYR N CA sing N N 289 TYR N H sing N N 290 TYR N H2 sing N N 291 TYR CA C sing N N 292 TYR CA CB sing N N 293 TYR CA HA sing N N 294 TYR C O doub N N 295 TYR C OXT sing N N 296 TYR CB CG sing N N 297 TYR CB HB2 sing N N 298 TYR CB HB3 sing N N 299 TYR CG CD1 doub Y N 300 TYR CG CD2 sing Y N 301 TYR CD1 CE1 sing Y N 302 TYR CD1 HD1 sing N N 303 TYR CD2 CE2 doub Y N 304 TYR CD2 HD2 sing N N 305 TYR CE1 CZ doub Y N 306 TYR CE1 HE1 sing N N 307 TYR CE2 CZ sing Y N 308 TYR CE2 HE2 sing N N 309 TYR CZ OH sing N N 310 TYR OH HH sing N N 311 TYR OXT HXT sing N N 312 VAL N CA sing N N 313 VAL N H sing N N 314 VAL N H2 sing N N 315 VAL CA C sing N N 316 VAL CA CB sing N N 317 VAL CA HA sing N N 318 VAL C O doub N N 319 VAL C OXT sing N N 320 VAL CB CG1 sing N N 321 VAL CB CG2 sing N N 322 VAL CB HB sing N N 323 VAL CG1 HG11 sing N N 324 VAL CG1 HG12 sing N N 325 VAL CG1 HG13 sing N N 326 VAL CG2 HG21 sing N N 327 VAL CG2 HG22 sing N N 328 VAL CG2 HG23 sing N N 329 VAL OXT HXT sing N N 330 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'S10 OD020068' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'de novo design' # _atom_sites.entry_id 8GAD _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014872 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014872 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009813 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_