HEADER RNA BINDING PROTEIN 25-FEB-23 8GBD TITLE HOMO SAPIENS ZALPHA MUTANT - P193A COMPND MOL_ID: 1; COMPND 2 MOLECULE: DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DRADA,136 KDA DOUBLE-STRANDED RNA-BINDING PROTEIN,P136, COMPND 5 INTERFERON-INDUCIBLE PROTEIN 4,IFI-4,K88DSRBP; COMPND 6 EC: 3.5.4.37; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ADAR, ADAR1, DSRAD, G1P1, IFI4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.J.LANGEBERG,B.VOGELI,P.J.NICHOLS,M.HENEN,Q.VICENS REVDAT 2 29-MAR-23 8GBD 1 JRNL REVDAT 1 22-MAR-23 8GBD 0 JRNL AUTH C.J.LANGEBERG,P.J.NICHOLS,M.A.HENEN,Q.VICENS,B.VOGELI JRNL TITL DIFFERENTIAL STRUCTURAL FEATURES OF TWO MUTANT ADAR1P150 Z JRNL TITL 2 ALPHA DOMAINS ASSOCIATED WITH AICARDI-GOUTIERES SYNDROME. JRNL REF J.MOL.BIOL. V. 435 68040 2023 JRNL REFN ESSN 1089-8638 JRNL PMID 36889460 JRNL DOI 10.1016/J.JMB.2023.168040 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.98.13 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GBD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1000272408. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 277 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2 MM [U-13C; U-15N] PROTEIN, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCACB; 3D HNHAHB; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 119 REMARK 465 GLY A 120 REMARK 465 SER A 121 REMARK 465 SER A 122 REMARK 465 HIS A 123 REMARK 465 HIS A 124 REMARK 465 HIS A 125 REMARK 465 HIS A 126 REMARK 465 HIS A 127 REMARK 465 HIS A 128 REMARK 465 SER A 129 REMARK 465 SER A 130 REMARK 465 GLY A 131 REMARK 465 LEU A 132 REMARK 465 VAL A 133 REMARK 465 PRO A 134 REMARK 465 ARG A 135 REMARK 465 GLY A 136 REMARK 465 SER A 137 REMARK 465 HIS A 138 REMARK 465 MET A 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 152 147.20 -32.97 REMARK 500 1 LYS A 154 -166.08 -64.37 REMARK 500 1 ALA A 155 139.34 -173.21 REMARK 500 1 THR A 167 131.86 -31.17 REMARK 500 1 LEU A 185 125.58 176.19 REMARK 500 1 ALA A 189 94.74 -55.05 REMARK 500 1 PRO A 192 2.56 -69.77 REMARK 500 1 LEU A 194 -175.65 174.15 REMARK 500 1 ILE A 197 159.34 -45.43 REMARK 500 1 ALA A 198 124.26 -30.60 REMARK 500 1 SER A 200 105.13 -52.19 REMARK 500 2 LEU A 150 -74.60 -43.23 REMARK 500 2 GLU A 152 97.98 -13.23 REMARK 500 2 LEU A 185 127.03 -176.84 REMARK 500 2 GLU A 188 -169.90 -59.37 REMARK 500 2 ALA A 189 80.81 -62.07 REMARK 500 2 PRO A 192 1.99 -69.82 REMARK 500 2 ALA A 193 -74.22 -60.38 REMARK 500 2 ILE A 197 154.21 -41.27 REMARK 500 2 ALA A 198 130.99 -27.96 REMARK 500 2 SER A 200 -50.15 -177.14 REMARK 500 3 LEU A 150 -75.03 -45.80 REMARK 500 3 GLU A 152 87.33 -5.84 REMARK 500 3 THR A 167 133.89 -30.34 REMARK 500 3 LEU A 185 128.53 -177.31 REMARK 500 3 ALA A 189 92.57 -42.24 REMARK 500 3 PRO A 192 2.71 -69.77 REMARK 500 3 LYS A 196 131.50 -175.92 REMARK 500 3 ILE A 197 155.47 -39.25 REMARK 500 3 ALA A 198 134.06 -35.40 REMARK 500 3 SER A 200 105.12 -51.70 REMARK 500 4 GLU A 152 123.76 -22.06 REMARK 500 4 LYS A 154 -162.61 -77.56 REMARK 500 4 ALA A 155 131.16 -174.13 REMARK 500 4 THR A 167 133.06 -37.53 REMARK 500 4 LEU A 185 105.80 -170.38 REMARK 500 4 GLN A 186 165.39 -48.59 REMARK 500 4 GLU A 188 171.61 -44.12 REMARK 500 4 ALA A 189 88.03 -62.54 REMARK 500 4 PRO A 192 0.72 -69.84 REMARK 500 4 LEU A 194 -160.62 178.41 REMARK 500 4 ILE A 197 161.29 -45.30 REMARK 500 4 ALA A 198 119.71 -28.72 REMARK 500 4 SER A 200 -75.20 178.57 REMARK 500 4 THR A 201 42.96 -159.07 REMARK 500 5 LEU A 150 -73.16 -40.25 REMARK 500 5 GLU A 152 83.54 -5.31 REMARK 500 5 ALA A 155 158.73 -49.80 REMARK 500 5 THR A 167 128.85 -27.14 REMARK 500 5 LEU A 185 124.21 174.00 REMARK 500 REMARK 500 THIS ENTRY HAS 220 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 51834 RELATED DB: BMRB DBREF 8GBD A 140 202 UNP P55265 DSRAD_HUMAN 140 202 SEQADV 8GBD MET A 119 UNP P55265 INITIATING METHIONINE SEQADV 8GBD GLY A 120 UNP P55265 EXPRESSION TAG SEQADV 8GBD SER A 121 UNP P55265 EXPRESSION TAG SEQADV 8GBD SER A 122 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 123 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 124 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 125 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 126 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 127 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 128 UNP P55265 EXPRESSION TAG SEQADV 8GBD SER A 129 UNP P55265 EXPRESSION TAG SEQADV 8GBD SER A 130 UNP P55265 EXPRESSION TAG SEQADV 8GBD GLY A 131 UNP P55265 EXPRESSION TAG SEQADV 8GBD LEU A 132 UNP P55265 EXPRESSION TAG SEQADV 8GBD VAL A 133 UNP P55265 EXPRESSION TAG SEQADV 8GBD PRO A 134 UNP P55265 EXPRESSION TAG SEQADV 8GBD ARG A 135 UNP P55265 EXPRESSION TAG SEQADV 8GBD GLY A 136 UNP P55265 EXPRESSION TAG SEQADV 8GBD SER A 137 UNP P55265 EXPRESSION TAG SEQADV 8GBD HIS A 138 UNP P55265 EXPRESSION TAG SEQADV 8GBD MET A 139 UNP P55265 EXPRESSION TAG SEQADV 8GBD ALA A 193 UNP P55265 PRO 193 ENGINEERED MUTATION SEQRES 1 A 84 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 84 LEU VAL PRO ARG GLY SER HIS MET GLU GLN ARG ILE LEU SEQRES 3 A 84 LYS PHE LEU GLU GLU LEU GLY GLU GLY LYS ALA THR THR SEQRES 4 A 84 ALA HIS ASP LEU SER GLY LYS LEU GLY THR PRO LYS LYS SEQRES 5 A 84 GLU ILE ASN ARG VAL LEU TYR SER LEU ALA LYS LYS GLY SEQRES 6 A 84 LYS LEU GLN LYS GLU ALA GLY THR PRO ALA LEU TRP LYS SEQRES 7 A 84 ILE ALA VAL SER THR GLN HELIX 1 AA1 GLU A 140 LYS A 145 1 6 HELIX 2 AA2 PHE A 146 GLY A 151 1 6 HELIX 3 AA3 THR A 157 SER A 162 1 6 HELIX 4 AA4 PRO A 168 ALA A 180 1 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1