HEADER ISOMERASE 01-MAR-23 8GCC TITLE T. CRUZI TOPOISOMERASE II ALPHA BOUND TO DSDNA AND THE COVALENT TITLE 2 INHIBITOR CT1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA TOPOISOMERASE 2; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (28-MER); COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI STRAIN CL BRENER; SOURCE 3 ORGANISM_TAXID: 353153; SOURCE 4 GENE: TC00.1047053508699.10; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 10 ORGANISM_TAXID: 562 KEYWDS TOPOISOMERASE, DNA BINDING PROTEIN, TOPOISOMERASE INHIBITOR, KEYWDS 2 ISOMERASE EXPDTA ELECTRON MICROSCOPY AUTHOR A.SCHENK,C.DENISTON,J.NOESKE REVDAT 2 06-NOV-24 8GCC 1 REMARK REVDAT 1 12-JUL-23 8GCC 0 JRNL AUTH S.P.S.RAO,M.K.GOULD,J.NOESKE,M.SALDIVIA,R.S.JUMANI,P.S.NG, JRNL AUTH 2 O.RENE,Y.L.CHEN,M.KAISER,R.RITCHIE,A.F.FRANCISCO,N.JOHNSON, JRNL AUTH 3 D.PATRA,H.CHEUNG,C.DENISTON,A.D.SCHENK,W.A.CORTOPASSI, JRNL AUTH 4 R.S.SCHMIDT,N.WIEDEMAR,B.THOMAS,R.PALKAR,N.A.GHAFAR, JRNL AUTH 5 V.MANOHARAN,C.LUU,J.E.GABLE,K.F.WAN,E.MYBURGH,J.C.MOTTRAM, JRNL AUTH 6 W.BARNES,J.WALKER,C.WARTCHOW,N.AZIZ,C.OSBORNE,J.WAGNER, JRNL AUTH 7 C.SARKO,J.M.KELLY,U.H.MANJUNATHA,P.MAESER,J.JIRICEK, JRNL AUTH 8 S.B.LAKSHMINARAYANA,M.P.BARRETT,T.T.DIAGANA JRNL TITL CYANOTRIAZOLES ARE SELECTIVE TOPOISOMERASE II POISONS THAT JRNL TITL 2 RAPIDLY CURE TRYPANOSOME INFECTIONS. JRNL REF SCIENCE V. 380 1349 2023 JRNL REFN ESSN 1095-9203 JRNL PMID 37384702 JRNL DOI 10.1126/SCIENCE.ADH0614 REMARK 2 REMARK 2 RESOLUTION. 2.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.940 REMARK 3 NUMBER OF PARTICLES : 179787 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8GCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000272537. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TOPOISOMERASE II ALPHA BOUND TO REMARK 245 DSDNA AND INHIBITOR CT1; REMARK 245 TOPOISOMERASE II ALPHA; DSDNA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.30 REMARK 245 SAMPLE DETAILS : DNA SEQUENCE: GG GAT AAC AAT REMARK 245 GAG CTC ATT GTT ATC CC REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2220 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 0.01 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 75000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 400 REMARK 465 ARG A 401 REMARK 465 ASN A 402 REMARK 465 ALA A 403 REMARK 465 ASP A 404 REMARK 465 ARG A 405 REMARK 465 LYS A 406 REMARK 465 GLN A 407 REMARK 465 ILE A 408 REMARK 465 LYS A 553 REMARK 465 LYS A 554 REMARK 465 GLY A 555 REMARK 465 ARG A 556 REMARK 465 SER A 557 REMARK 465 ASP A 558 REMARK 465 GLY A 559 REMARK 465 ASP A 560 REMARK 465 ASP A 561 REMARK 465 ARG A 562 REMARK 465 ALA A 563 REMARK 465 LEU A 1052 REMARK 465 GLN A 1053 REMARK 465 GLN A 1054 REMARK 465 LYS A 1055 REMARK 465 LYS A 1056 REMARK 465 LYS A 1057 REMARK 465 VAL A 1058 REMARK 465 SER A 1059 REMARK 465 SER A 1060 REMARK 465 THR A 1061 REMARK 465 THR A 1062 REMARK 465 ILE A 1063 REMARK 465 GLN A 1064 REMARK 465 GLN A 1065 REMARK 465 GLY A 1066 REMARK 465 GLU A 1067 REMARK 465 GLU A 1068 REMARK 465 GLU A 1069 REMARK 465 GLY A 1070 REMARK 465 ALA A 1071 REMARK 465 ALA A 1072 REMARK 465 ASP A 1073 REMARK 465 ALA A 1074 REMARK 465 THR A 1075 REMARK 465 HIS A 1076 REMARK 465 ALA A 1077 REMARK 465 THR A 1078 REMARK 465 ALA A 1079 REMARK 465 GLU A 1080 REMARK 465 ASP A 1081 REMARK 465 VAL A 1082 REMARK 465 PHE A 1083 REMARK 465 LEU A 1084 REMARK 465 VAL A 1085 REMARK 465 LEU A 1086 REMARK 465 GLN A 1087 REMARK 465 PRO A 1088 REMARK 465 ALA A 1089 REMARK 465 VAL A 1090 REMARK 465 ASP A 1091 REMARK 465 GLU A 1092 REMARK 465 GLY A 1093 REMARK 465 GLY A 1094 REMARK 465 ASP A 1095 REMARK 465 GLU A 1096 REMARK 465 ASP A 1097 REMARK 465 ASN A 1098 REMARK 465 GLN A 1099 REMARK 465 GLU A 1100 REMARK 465 THR A 1101 REMARK 465 PRO A 1102 REMARK 465 ILE A 1178 REMARK 465 GLY B 400 REMARK 465 ARG B 401 REMARK 465 ASN B 402 REMARK 465 ALA B 403 REMARK 465 ASP B 404 REMARK 465 ARG B 405 REMARK 465 LYS B 406 REMARK 465 GLN B 407 REMARK 465 ILE B 408 REMARK 465 LYS B 553 REMARK 465 LYS B 554 REMARK 465 GLY B 555 REMARK 465 ARG B 556 REMARK 465 SER B 557 REMARK 465 ASP B 558 REMARK 465 GLY B 559 REMARK 465 ASP B 560 REMARK 465 ASP B 561 REMARK 465 ARG B 562 REMARK 465 ALA B 563 REMARK 465 LEU B 1052 REMARK 465 GLN B 1053 REMARK 465 GLN B 1054 REMARK 465 LYS B 1055 REMARK 465 LYS B 1056 REMARK 465 LYS B 1057 REMARK 465 VAL B 1058 REMARK 465 SER B 1059 REMARK 465 SER B 1060 REMARK 465 THR B 1061 REMARK 465 THR B 1062 REMARK 465 ILE B 1063 REMARK 465 GLN B 1064 REMARK 465 GLN B 1065 REMARK 465 GLY B 1066 REMARK 465 GLU B 1067 REMARK 465 GLU B 1068 REMARK 465 GLU B 1069 REMARK 465 GLY B 1070 REMARK 465 ALA B 1071 REMARK 465 ALA B 1072 REMARK 465 ASP B 1073 REMARK 465 ALA B 1074 REMARK 465 THR B 1075 REMARK 465 HIS B 1076 REMARK 465 ALA B 1077 REMARK 465 THR B 1078 REMARK 465 ALA B 1079 REMARK 465 GLU B 1080 REMARK 465 ASP B 1081 REMARK 465 VAL B 1082 REMARK 465 PHE B 1083 REMARK 465 LEU B 1084 REMARK 465 VAL B 1085 REMARK 465 LEU B 1086 REMARK 465 GLN B 1087 REMARK 465 PRO B 1088 REMARK 465 ALA B 1089 REMARK 465 VAL B 1090 REMARK 465 ASP B 1091 REMARK 465 GLU B 1092 REMARK 465 GLY B 1093 REMARK 465 GLY B 1094 REMARK 465 ASP B 1095 REMARK 465 GLU B 1096 REMARK 465 ASP B 1097 REMARK 465 ASN B 1098 REMARK 465 GLN B 1099 REMARK 465 GLU B 1100 REMARK 465 THR B 1101 REMARK 465 PRO B 1102 REMARK 465 ILE B 1178 REMARK 465 DG C 0 REMARK 465 DG C 1 REMARK 465 DC C 26 REMARK 465 DC C 27 REMARK 465 DG D 0 REMARK 465 DG D 1 REMARK 465 DC D 26 REMARK 465 DC D 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 419 CG CD OE1 OE2 REMARK 470 LYS A 423 CG CD CE NZ REMARK 470 TYR A 424 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 436 CG OD1 OD2 REMARK 470 SER A 437 OG REMARK 470 LYS A 439 CD CE NZ REMARK 470 THR A 443 OG1 CG2 REMARK 470 LEU A 446 CG CD1 CD2 REMARK 470 VAL A 448 CG1 CG2 REMARK 470 LYS A 449 CG CD CE NZ REMARK 470 ASP A 450 CG OD1 OD2 REMARK 470 ASP A 452 CG OD1 OD2 REMARK 470 LEU A 471 CG CD1 CD2 REMARK 470 MET A 475 SD CE REMARK 470 LYS A 485 CG CD CE NZ REMARK 470 ASP A 490 CG OD1 OD2 REMARK 470 ARG A 492 NE CZ NH1 NH2 REMARK 470 GLN A 493 CG CD OE1 NE2 REMARK 470 LYS A 494 CG CD CE NZ REMARK 470 GLU A 499 CG CD OE1 OE2 REMARK 470 ASP A 511 CG OD1 OD2 REMARK 470 VAL A 549 CG1 CG2 REMARK 470 ARG A 552 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 574 CG CD OE1 OE2 REMARK 470 LYS A 576 CE NZ REMARK 470 ASN A 577 CG OD1 ND2 REMARK 470 ASP A 581 CG OD1 OD2 REMARK 470 ILE A 583 CG1 CG2 CD1 REMARK 470 ARG A 584 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 585 CG OD1 ND2 REMARK 470 GLU A 587 CG CD OE1 OE2 REMARK 470 ARG A 589 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 592 CG CD CE NZ REMARK 470 LYS A 600 CG CD CE NZ REMARK 470 GLU A 604 CG CD OE1 OE2 REMARK 470 GLU A 607 CG CD OE1 OE2 REMARK 470 ASN A 608 CG OD1 ND2 REMARK 470 ASP A 610 CG OD1 OD2 REMARK 470 GLU A 619 CG CD OE1 OE2 REMARK 470 ASP A 620 CG OD1 OD2 REMARK 470 LYS A 633 CD CE NZ REMARK 470 THR A 650 OG1 CG2 REMARK 470 ASN A 651 CG OD1 ND2 REMARK 470 VAL A 652 CG1 CG2 REMARK 470 ASN A 653 CG OD1 ND2 REMARK 470 GLU A 654 CG CD OE1 OE2 REMARK 470 SER A 655 OG REMARK 470 ASN A 659 CG OD1 ND2 REMARK 470 ARG A 661 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 667 CG CD OE1 OE2 REMARK 470 GLU A 682 CD OE1 OE2 REMARK 470 ARG A 707 NE CZ NH1 NH2 REMARK 470 ARG A 710 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 731 CG CD OE1 OE2 REMARK 470 GLN A 732 CG CD OE1 NE2 REMARK 470 ASP A 757 CG OD1 OD2 REMARK 470 GLN A 759 OE1 NE2 REMARK 470 ASN A 782 CG OD1 ND2 REMARK 470 ASP A 800 CG OD1 OD2 REMARK 470 ASP A 801 CG OD1 OD2 REMARK 470 ASP A 802 CG OD1 OD2 REMARK 470 GLU A 854 CG CD OE1 OE2 REMARK 470 ASN A 884 CG OD1 ND2 REMARK 470 PRO A 887 CG CD REMARK 470 ASP A 888 CG OD1 OD2 REMARK 470 VAL A 890 CG1 CG2 REMARK 470 LYS A 907 CD CE NZ REMARK 470 GLU A 910 CG CD OE1 OE2 REMARK 470 GLU A 911 CG CD OE1 OE2 REMARK 470 GLU A 914 CG CD OE1 OE2 REMARK 470 LYS A 915 CG CD CE NZ REMARK 470 GLU A 916 CG CD OE1 OE2 REMARK 470 VAL A 917 CG1 CG2 REMARK 470 VAL A 919 CG1 CG2 REMARK 470 ARG A 922 NE CZ NH1 NH2 REMARK 470 GLU A 923 CD OE1 OE2 REMARK 470 ASP A 927 CG OD1 OD2 REMARK 470 ASP A 931 CG OD1 OD2 REMARK 470 GLU A 933 CG CD OE1 OE2 REMARK 470 LEU A 936 CG CD1 CD2 REMARK 470 HIS A 937 CG ND1 CD2 CE1 NE2 REMARK 470 PRO A 938 CG CD REMARK 470 GLU A 939 CG CD OE1 OE2 REMARK 470 VAL A 940 CG1 CG2 REMARK 470 LEU A 941 CG CD1 CD2 REMARK 470 HIS A 942 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 943 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 945 CG1 CG2 REMARK 470 GLN A 947 CG CD OE1 NE2 REMARK 470 CYS A 949 SG REMARK 470 GLU A 951 CG CD OE1 OE2 REMARK 470 GLU A 952 CG CD OE1 OE2 REMARK 470 ARG A 953 CG CD NE CZ NH1 NH2 REMARK 470 ASP A1005 CG OD1 OD2 REMARK 470 ASP A1025 CG OD1 OD2 REMARK 470 ARG A1027 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1032 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1034 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1036 CG CD CE NZ REMARK 470 GLU A1037 CG CD OE1 OE2 REMARK 470 GLU A1040 CG CD OE1 OE2 REMARK 470 GLU A1103 CG CD OE1 OE2 REMARK 470 MET A1104 CG SD CE REMARK 470 ARG A1105 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1106 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1109 CD NE CZ NH1 NH2 REMARK 470 ASP A1110 CG OD1 OD2 REMARK 470 ARG A1118 CZ NH1 NH2 REMARK 470 GLU A1125 CG CD OE1 OE2 REMARK 470 SER A1132 OG REMARK 470 LYS A1136 CG CD CE NZ REMARK 470 LYS A1146 CE NZ REMARK 470 GLU A1155 CG CD OE1 OE2 REMARK 470 GLU A1165 CD OE1 OE2 REMARK 470 GLU A1169 CG CD OE1 OE2 REMARK 470 GLU A1170 CD OE1 OE2 REMARK 470 LYS A1173 CG CD CE NZ REMARK 470 GLU A1174 CD OE1 OE2 REMARK 470 SER A1177 OG REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 LYS B 423 CG CD CE NZ REMARK 470 TYR B 424 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 436 CG OD1 OD2 REMARK 470 SER B 437 OG REMARK 470 LYS B 439 CD CE NZ REMARK 470 THR B 443 OG1 CG2 REMARK 470 LEU B 446 CG CD1 CD2 REMARK 470 VAL B 448 CG1 CG2 REMARK 470 LYS B 449 CG CD CE NZ REMARK 470 ASP B 450 CG OD1 OD2 REMARK 470 ASP B 452 CG OD1 OD2 REMARK 470 LEU B 471 CG CD1 CD2 REMARK 470 MET B 475 SD CE REMARK 470 LYS B 485 CG CD CE NZ REMARK 470 ASP B 490 CG OD1 OD2 REMARK 470 ARG B 492 NE CZ NH1 NH2 REMARK 470 GLN B 493 CG CD OE1 NE2 REMARK 470 LYS B 494 CG CD CE NZ REMARK 470 GLU B 499 CG CD OE1 OE2 REMARK 470 ASP B 511 CG OD1 OD2 REMARK 470 VAL B 549 CG1 CG2 REMARK 470 ARG B 552 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 574 CG CD OE1 OE2 REMARK 470 LYS B 576 CE NZ REMARK 470 ASN B 577 CG OD1 ND2 REMARK 470 ASP B 581 CG OD1 OD2 REMARK 470 ILE B 583 CG1 CG2 CD1 REMARK 470 ARG B 584 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 585 CG OD1 ND2 REMARK 470 GLU B 587 CG CD OE1 OE2 REMARK 470 ARG B 589 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 592 CG CD CE NZ REMARK 470 LYS B 600 CG CD CE NZ REMARK 470 GLU B 604 CG CD OE1 OE2 REMARK 470 GLU B 607 CG CD OE1 OE2 REMARK 470 ASN B 608 CG OD1 ND2 REMARK 470 ASP B 610 CG OD1 OD2 REMARK 470 GLU B 619 CG CD OE1 OE2 REMARK 470 ASP B 620 CG OD1 OD2 REMARK 470 LYS B 633 CD CE NZ REMARK 470 THR B 650 OG1 CG2 REMARK 470 ASN B 651 CG OD1 ND2 REMARK 470 VAL B 652 CG1 CG2 REMARK 470 ASN B 653 CG OD1 ND2 REMARK 470 GLU B 654 CG CD OE1 OE2 REMARK 470 SER B 655 OG REMARK 470 ASN B 659 CG OD1 ND2 REMARK 470 ARG B 661 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 667 CG CD OE1 OE2 REMARK 470 GLU B 682 CD OE1 OE2 REMARK 470 ARG B 707 NE CZ NH1 NH2 REMARK 470 ARG B 710 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 731 CG CD OE1 OE2 REMARK 470 GLN B 732 CG CD OE1 NE2 REMARK 470 ASP B 757 CG OD1 OD2 REMARK 470 GLN B 759 OE1 NE2 REMARK 470 ASN B 782 CG OD1 ND2 REMARK 470 ASP B 800 CG OD1 OD2 REMARK 470 ASP B 801 CG OD1 OD2 REMARK 470 ASP B 802 CG OD1 OD2 REMARK 470 GLU B 854 CG CD OE1 OE2 REMARK 470 ASN B 884 CG OD1 ND2 REMARK 470 PRO B 887 CG CD REMARK 470 ASP B 888 CG OD1 OD2 REMARK 470 VAL B 890 CG1 CG2 REMARK 470 LYS B 907 CD CE NZ REMARK 470 GLU B 910 CG CD OE1 OE2 REMARK 470 GLU B 911 CG CD OE1 OE2 REMARK 470 GLU B 914 CG CD OE1 OE2 REMARK 470 LYS B 915 CG CD CE NZ REMARK 470 GLU B 916 CG CD OE1 OE2 REMARK 470 VAL B 917 CG1 CG2 REMARK 470 VAL B 919 CG1 CG2 REMARK 470 ARG B 922 NE CZ NH1 NH2 REMARK 470 GLU B 923 CD OE1 OE2 REMARK 470 ASP B 927 CG OD1 OD2 REMARK 470 ASP B 931 CG OD1 OD2 REMARK 470 GLU B 933 CG CD OE1 OE2 REMARK 470 LEU B 936 CG CD1 CD2 REMARK 470 HIS B 937 CG ND1 CD2 CE1 NE2 REMARK 470 PRO B 938 CG CD REMARK 470 GLU B 939 CG CD OE1 OE2 REMARK 470 VAL B 940 CG1 CG2 REMARK 470 LEU B 941 CG CD1 CD2 REMARK 470 HIS B 942 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 943 CG ND1 CD2 CE1 NE2 REMARK 470 VAL B 945 CG1 CG2 REMARK 470 GLN B 947 CG CD OE1 NE2 REMARK 470 CYS B 949 SG REMARK 470 GLU B 951 CG CD OE1 OE2 REMARK 470 GLU B 952 CG CD OE1 OE2 REMARK 470 ARG B 953 CG CD NE CZ NH1 NH2 REMARK 470 ASP B1005 CG OD1 OD2 REMARK 470 ASP B1025 CG OD1 OD2 REMARK 470 ARG B1027 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1032 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1034 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1036 CG CD CE NZ REMARK 470 GLU B1037 CG CD OE1 OE2 REMARK 470 GLU B1040 CG CD OE1 OE2 REMARK 470 GLU B1103 CG CD OE1 OE2 REMARK 470 MET B1104 CG SD CE REMARK 470 ARG B1105 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1106 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1109 CD NE CZ NH1 NH2 REMARK 470 ASP B1110 CG OD1 OD2 REMARK 470 GLU B1125 CG CD OE1 OE2 REMARK 470 SER B1132 OG REMARK 470 LYS B1136 CG CD CE NZ REMARK 470 LYS B1146 CE NZ REMARK 470 GLU B1155 CG CD OE1 OE2 REMARK 470 GLU B1165 CD OE1 OE2 REMARK 470 GLU B1169 CG CD OE1 OE2 REMARK 470 GLU B1170 CD OE1 OE2 REMARK 470 LYS B1173 CG CD CE NZ REMARK 470 GLU B1174 CD OE1 OE2 REMARK 470 SER B1177 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 995 OD2 ASP A 1156 1.59 REMARK 500 HH TYR B 995 OD2 ASP B 1156 1.59 REMARK 500 O ALA B 632 HH22 ARG B 639 1.60 REMARK 500 N2 DG C 2 O2 DC D 25 1.94 REMARK 500 O2 DC C 25 N2 DG D 2 2.04 REMARK 500 NH2 ARG B 1007 OE2 GLU B 1145 2.05 REMARK 500 NH2 ARG A 1007 OE2 GLU A 1145 2.05 REMARK 500 O TRP B 1120 OG1 THR B 1123 2.09 REMARK 500 O TRP A 1120 OG1 THR A 1123 2.10 REMARK 500 OE2 GLU A 1014 NH2 ARG A 1138 2.16 REMARK 500 OD2 ASP B 416 NH2 ARG B 502 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT C 19 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT D 22 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 419 34.72 -99.05 REMARK 500 GLU A 434 35.87 -98.57 REMARK 500 PRO A 463 170.31 -56.18 REMARK 500 GLN A 512 54.08 -90.33 REMARK 500 TYR A 591 58.21 -96.39 REMARK 500 ASN A 744 12.98 -140.39 REMARK 500 GLU A 807 158.40 -47.58 REMARK 500 PRO A 887 48.64 -83.74 REMARK 500 ASP A 888 21.50 -142.43 REMARK 500 GLU A 916 60.88 61.49 REMARK 500 ASP A 979 -169.48 -162.50 REMARK 500 LEU A1122 51.22 -91.61 REMARK 500 GLU B 419 34.63 -99.40 REMARK 500 PRO B 463 170.31 -56.05 REMARK 500 GLN B 512 53.98 -90.35 REMARK 500 TYR B 591 57.81 -95.89 REMARK 500 ASN B 744 12.99 -140.33 REMARK 500 GLU B 807 154.57 -46.19 REMARK 500 PRO B 887 48.44 -81.06 REMARK 500 ASP B 888 19.41 -142.20 REMARK 500 GLU B 916 61.04 61.38 REMARK 500 ASP B 979 -169.99 -162.14 REMARK 500 LEU B1122 51.39 -91.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-29930 RELATED DB: EMDB REMARK 900 T. CRUZI TOPOISOMERASE II ALPHA BOUND TO DSDNA AND THE COVALENT REMARK 900 INHIBITOR CT1 DBREF 8GCC A 401 1178 UNP Q4DE53 Q4DE53_TRYCC 401 1178 DBREF 8GCC B 401 1178 UNP Q4DE53 Q4DE53_TRYCC 401 1178 DBREF 8GCC C 0 27 PDB 8GCC 8GCC 0 27 DBREF 8GCC D 0 27 PDB 8GCC 8GCC 0 27 SEQADV 8GCC GLY A 400 UNP Q4DE53 EXPRESSION TAG SEQADV 8GCC GLY B 400 UNP Q4DE53 EXPRESSION TAG SEQRES 1 A 779 GLY ARG ASN ALA ASP ARG LYS GLN ILE LEU GLY ILE PRO SEQRES 2 A 779 LYS LEU ASP ASP ALA ASN GLU ALA GLY GLY LYS TYR SER SEQRES 3 A 779 HIS ARG CYS THR LEU ILE LEU THR GLU GLY ASP SER ALA SEQRES 4 A 779 LYS ALA LEU CYS THR ALA GLY LEU ALA VAL LYS ASP ARG SEQRES 5 A 779 ASP TYR PHE GLY VAL PHE PRO LEU ARG GLY LYS PRO LEU SEQRES 6 A 779 ASN VAL ARG ASP ALA THR LEU LYS LYS VAL MET ALA CYS SEQRES 7 A 779 ALA GLU PHE GLN ALA VAL SER LYS ILE MET GLY LEU ASP SEQRES 8 A 779 ILE ARG GLN LYS TYR SER GLY VAL GLU ARG LEU ARG TYR SEQRES 9 A 779 GLY HIS LEU MET ILE MET SER ASP GLN ASP HIS ASP GLY SEQRES 10 A 779 SER HIS ILE LYS GLY LEU ILE ILE ASN MET ILE HIS HIS SEQRES 11 A 779 TYR TRP PRO ASP LEU ILE LYS THR PRO GLY PHE LEU GLN SEQRES 12 A 779 GLN PHE ILE THR PRO ILE VAL LYS ALA ARG LYS LYS GLY SEQRES 13 A 779 ARG SER ASP GLY ASP ASP ARG ALA ILE SER PHE PHE SER SEQRES 14 A 779 MET PRO ASP TYR PHE GLU TRP LYS ASN ALA ILE GLY ASP SEQRES 15 A 779 GLY ILE ARG ASN TYR GLU ILE ARG TYR TYR LYS GLY LEU SEQRES 16 A 779 GLY THR SER GLY ALA LYS GLU GLY ARG GLU TYR PHE GLU SEQRES 17 A 779 ASN ILE ASP ARG HIS ARG LEU ASP PHE VAL HIS GLU ASP SEQRES 18 A 779 ALA THR ASP ASP ALA ARG ILE VAL MET ALA PHE ALA LYS SEQRES 19 A 779 ASP LYS VAL GLU GLU ARG LYS HIS TRP ILE THR GLN PHE SEQRES 20 A 779 LYS ALA ASN THR ASN VAL ASN GLU SER MET ASN TYR ASN SEQRES 21 A 779 VAL ARG THR VAL ARG TYR SER GLU PHE VAL ASP LYS GLU SEQRES 22 A 779 LEU ILE LEU PHE SER VAL ALA ASP CYS GLU ARG SER ILE SEQRES 23 A 779 PRO SER VAL ILE ASP GLY LEU LYS PRO GLY GLN ARG LYS SEQRES 24 A 779 ILE ILE PHE SER SER PHE LYS ARG ARG LEU THR ARG SER SEQRES 25 A 779 ILE LYS VAL VAL GLN LEU ALA GLY TYR VAL SER GLU HIS SEQRES 26 A 779 ALA ALA TYR HIS HIS GLY GLU GLN SER LEU VAL GLN THR SEQRES 27 A 779 ILE VAL GLY LEU ALA GLN ASN PHE VAL GLY SER ASN ASN SEQRES 28 A 779 VAL PRO LEU LEU GLN GLN ASP GLY GLN PHE GLY THR ARG SEQRES 29 A 779 LEU GLN GLY GLY LYS ASP HIS ALA ALA GLY ARG TYR ILE SEQRES 30 A 779 PHE THR ARG LEU THR ASN ILE ALA ARG TYR ILE TYR HIS SEQRES 31 A 779 PRO SER ASP ASP PHE VAL VAL ASP TYR LYS ASP ASP ASP SEQRES 32 A 779 GLY LEU SER VAL GLU PRO PHE TYR TYR VAL PRO VAL ILE SEQRES 33 A 779 PRO MET VAL LEU VAL ASN GLY THR SER GLY ILE GLY THR SEQRES 34 A 779 GLY PHE ALA THR ASN ILE PRO ASN TYR SER PRO LEU GLU SEQRES 35 A 779 VAL ILE ASP ASN LEU MET ARG LEU LEU ARG GLY GLU GLU SEQRES 36 A 779 VAL GLN PRO MET LYS PRO TRP TYR PHE GLY PHE ALA GLY SEQRES 37 A 779 THR ILE GLU GLU LYS GLU LYS GLY LYS PHE VAL SER THR SEQRES 38 A 779 GLY CYS ALA ASN VAL ARG PRO ASP GLY VAL VAL GLN ILE SEQRES 39 A 779 THR GLU LEU PRO ILE GLY THR TRP THR GLN GLY TYR LYS SEQRES 40 A 779 LYS PHE LEU GLU GLU LEU ARG GLU LYS GLU VAL VAL VAL SEQRES 41 A 779 GLN TYR ARG GLU HIS ASN THR ASP VAL THR VAL ASP PHE SEQRES 42 A 779 GLU VAL PHE LEU HIS PRO GLU VAL LEU HIS HIS TRP VAL SEQRES 43 A 779 ALA GLN GLY CYS VAL GLU GLU ARG LEU GLN LEU ARG GLU SEQRES 44 A 779 TYR ILE HIS ALA THR ASN ILE ILE ALA PHE ASP ARG GLU SEQRES 45 A 779 GLY GLN ILE THR LYS TYR ARG ASP ALA GLU ALA VAL LEU SEQRES 46 A 779 LYS GLU PHE TYR LEU VAL ARG LEU GLU TYR TYR ALA LYS SEQRES 47 A 779 ARG ARG ASP PHE LEU ILE GLY ASP LEU ARG SER VAL ALA SEQRES 48 A 779 SER LYS LEU GLU ASN MET VAL ARG PHE VAL THR GLU VAL SEQRES 49 A 779 VAL ASP GLY ARG LEU ILE VAL THR ARG ARG ARG LYS LYS SEQRES 50 A 779 GLU LEU LEU GLU GLU LEU ARG GLN ARG GLY TYR ALA PRO SEQRES 51 A 779 PHE PRO LEU GLN GLN LYS LYS LYS VAL SER SER THR THR SEQRES 52 A 779 ILE GLN GLN GLY GLU GLU GLU GLY ALA ALA ASP ALA THR SEQRES 53 A 779 HIS ALA THR ALA GLU ASP VAL PHE LEU VAL LEU GLN PRO SEQRES 54 A 779 ALA VAL ASP GLU GLY GLY ASP GLU ASP ASN GLN GLU THR SEQRES 55 A 779 PRO GLU MET ARG ARG ALA ALA ARG ASP TYR ASP TYR LEU SEQRES 56 A 779 LEU GLY MET ARG LEU TRP ASN LEU THR ALA GLU MET ILE SEQRES 57 A 779 ALA ARG LEU GLN SER GLN LEU GLN LYS ALA ARG ASP GLU SEQRES 58 A 779 LEU ALA ALA LEU GLU LYS ARG THR PRO LYS ASP LEU TRP SEQRES 59 A 779 ALA GLU ASP LEU ASN GLN LEU ARG PRO ARG ILE GLU ASN SEQRES 60 A 779 LEU PHE GLU GLU ARG ALA LYS GLU ILE ALA SER ILE SEQRES 1 B 779 GLY ARG ASN ALA ASP ARG LYS GLN ILE LEU GLY ILE PRO SEQRES 2 B 779 LYS LEU ASP ASP ALA ASN GLU ALA GLY GLY LYS TYR SER SEQRES 3 B 779 HIS ARG CYS THR LEU ILE LEU THR GLU GLY ASP SER ALA SEQRES 4 B 779 LYS ALA LEU CYS THR ALA GLY LEU ALA VAL LYS ASP ARG SEQRES 5 B 779 ASP TYR PHE GLY VAL PHE PRO LEU ARG GLY LYS PRO LEU SEQRES 6 B 779 ASN VAL ARG ASP ALA THR LEU LYS LYS VAL MET ALA CYS SEQRES 7 B 779 ALA GLU PHE GLN ALA VAL SER LYS ILE MET GLY LEU ASP SEQRES 8 B 779 ILE ARG GLN LYS TYR SER GLY VAL GLU ARG LEU ARG TYR SEQRES 9 B 779 GLY HIS LEU MET ILE MET SER ASP GLN ASP HIS ASP GLY SEQRES 10 B 779 SER HIS ILE LYS GLY LEU ILE ILE ASN MET ILE HIS HIS SEQRES 11 B 779 TYR TRP PRO ASP LEU ILE LYS THR PRO GLY PHE LEU GLN SEQRES 12 B 779 GLN PHE ILE THR PRO ILE VAL LYS ALA ARG LYS LYS GLY SEQRES 13 B 779 ARG SER ASP GLY ASP ASP ARG ALA ILE SER PHE PHE SER SEQRES 14 B 779 MET PRO ASP TYR PHE GLU TRP LYS ASN ALA ILE GLY ASP SEQRES 15 B 779 GLY ILE ARG ASN TYR GLU ILE ARG TYR TYR LYS GLY LEU SEQRES 16 B 779 GLY THR SER GLY ALA LYS GLU GLY ARG GLU TYR PHE GLU SEQRES 17 B 779 ASN ILE ASP ARG HIS ARG LEU ASP PHE VAL HIS GLU ASP SEQRES 18 B 779 ALA THR ASP ASP ALA ARG ILE VAL MET ALA PHE ALA LYS SEQRES 19 B 779 ASP LYS VAL GLU GLU ARG LYS HIS TRP ILE THR GLN PHE SEQRES 20 B 779 LYS ALA ASN THR ASN VAL ASN GLU SER MET ASN TYR ASN SEQRES 21 B 779 VAL ARG THR VAL ARG TYR SER GLU PHE VAL ASP LYS GLU SEQRES 22 B 779 LEU ILE LEU PHE SER VAL ALA ASP CYS GLU ARG SER ILE SEQRES 23 B 779 PRO SER VAL ILE ASP GLY LEU LYS PRO GLY GLN ARG LYS SEQRES 24 B 779 ILE ILE PHE SER SER PHE LYS ARG ARG LEU THR ARG SER SEQRES 25 B 779 ILE LYS VAL VAL GLN LEU ALA GLY TYR VAL SER GLU HIS SEQRES 26 B 779 ALA ALA TYR HIS HIS GLY GLU GLN SER LEU VAL GLN THR SEQRES 27 B 779 ILE VAL GLY LEU ALA GLN ASN PHE VAL GLY SER ASN ASN SEQRES 28 B 779 VAL PRO LEU LEU GLN GLN ASP GLY GLN PHE GLY THR ARG SEQRES 29 B 779 LEU GLN GLY GLY LYS ASP HIS ALA ALA GLY ARG TYR ILE SEQRES 30 B 779 PHE THR ARG LEU THR ASN ILE ALA ARG TYR ILE TYR HIS SEQRES 31 B 779 PRO SER ASP ASP PHE VAL VAL ASP TYR LYS ASP ASP ASP SEQRES 32 B 779 GLY LEU SER VAL GLU PRO PHE TYR TYR VAL PRO VAL ILE SEQRES 33 B 779 PRO MET VAL LEU VAL ASN GLY THR SER GLY ILE GLY THR SEQRES 34 B 779 GLY PHE ALA THR ASN ILE PRO ASN TYR SER PRO LEU GLU SEQRES 35 B 779 VAL ILE ASP ASN LEU MET ARG LEU LEU ARG GLY GLU GLU SEQRES 36 B 779 VAL GLN PRO MET LYS PRO TRP TYR PHE GLY PHE ALA GLY SEQRES 37 B 779 THR ILE GLU GLU LYS GLU LYS GLY LYS PHE VAL SER THR SEQRES 38 B 779 GLY CYS ALA ASN VAL ARG PRO ASP GLY VAL VAL GLN ILE SEQRES 39 B 779 THR GLU LEU PRO ILE GLY THR TRP THR GLN GLY TYR LYS SEQRES 40 B 779 LYS PHE LEU GLU GLU LEU ARG GLU LYS GLU VAL VAL VAL SEQRES 41 B 779 GLN TYR ARG GLU HIS ASN THR ASP VAL THR VAL ASP PHE SEQRES 42 B 779 GLU VAL PHE LEU HIS PRO GLU VAL LEU HIS HIS TRP VAL SEQRES 43 B 779 ALA GLN GLY CYS VAL GLU GLU ARG LEU GLN LEU ARG GLU SEQRES 44 B 779 TYR ILE HIS ALA THR ASN ILE ILE ALA PHE ASP ARG GLU SEQRES 45 B 779 GLY GLN ILE THR LYS TYR ARG ASP ALA GLU ALA VAL LEU SEQRES 46 B 779 LYS GLU PHE TYR LEU VAL ARG LEU GLU TYR TYR ALA LYS SEQRES 47 B 779 ARG ARG ASP PHE LEU ILE GLY ASP LEU ARG SER VAL ALA SEQRES 48 B 779 SER LYS LEU GLU ASN MET VAL ARG PHE VAL THR GLU VAL SEQRES 49 B 779 VAL ASP GLY ARG LEU ILE VAL THR ARG ARG ARG LYS LYS SEQRES 50 B 779 GLU LEU LEU GLU GLU LEU ARG GLN ARG GLY TYR ALA PRO SEQRES 51 B 779 PHE PRO LEU GLN GLN LYS LYS LYS VAL SER SER THR THR SEQRES 52 B 779 ILE GLN GLN GLY GLU GLU GLU GLY ALA ALA ASP ALA THR SEQRES 53 B 779 HIS ALA THR ALA GLU ASP VAL PHE LEU VAL LEU GLN PRO SEQRES 54 B 779 ALA VAL ASP GLU GLY GLY ASP GLU ASP ASN GLN GLU THR SEQRES 55 B 779 PRO GLU MET ARG ARG ALA ALA ARG ASP TYR ASP TYR LEU SEQRES 56 B 779 LEU GLY MET ARG LEU TRP ASN LEU THR ALA GLU MET ILE SEQRES 57 B 779 ALA ARG LEU GLN SER GLN LEU GLN LYS ALA ARG ASP GLU SEQRES 58 B 779 LEU ALA ALA LEU GLU LYS ARG THR PRO LYS ASP LEU TRP SEQRES 59 B 779 ALA GLU ASP LEU ASN GLN LEU ARG PRO ARG ILE GLU ASN SEQRES 60 B 779 LEU PHE GLU GLU ARG ALA LYS GLU ILE ALA SER ILE SEQRES 1 C 28 DG DG DG DA DT DA DA DC DA DA DT DG DA SEQRES 2 C 28 DG DC DT DC DA DT DT DG DT DT DA DT DC SEQRES 3 C 28 DC DC SEQRES 1 D 28 DG DG DG DA DT DA DA DC DA DA DT DG DA SEQRES 2 D 28 DG DC DT DC DA DT DT DG DT DT DA DT DC SEQRES 3 D 28 DC DC HET YWX C 101 29 HET YWX D 101 29 HETNAM YWX 2-{3-[(Z)-IMINOMETHYL]-1H-1,2,4-TRIAZOL-1-YL}-1-{(3M)- HETNAM 2 YWX 3-[2-(TRIFLUOROMETHYL)PHENYL]-6H-PYRROLO[3,4- HETNAM 3 YWX B]PYRIDIN-6-YL}ETHAN-1-ONE HETSYN YWX INHIBITOR CT1, BOUND FORM FORMUL 5 YWX 2(C19 H13 F3 N6 O) HELIX 1 AA1 TYR A 424 ARG A 427 5 4 HELIX 2 AA2 ASP A 436 LEU A 446 1 11 HELIX 3 AA3 ALA A 447 LYS A 449 5 3 HELIX 4 AA4 ASP A 450 ASP A 452 5 3 HELIX 5 AA5 THR A 470 ALA A 476 1 7 HELIX 6 AA6 CYS A 477 GLY A 488 1 12 HELIX 7 AA7 ASP A 513 TRP A 531 1 19 HELIX 8 AA8 TRP A 531 LYS A 536 1 6 HELIX 9 AA9 SER A 568 GLY A 580 1 13 HELIX 10 AB1 ASP A 581 TYR A 586 5 6 HELIX 11 AB2 GLY A 598 ASN A 608 1 11 HELIX 12 AB3 ILE A 609 ARG A 613 5 5 HELIX 13 AB4 ALA A 621 PHE A 631 1 11 HELIX 14 AB5 LYS A 635 ALA A 648 1 14 HELIX 15 AB6 ARG A 664 ILE A 685 1 22 HELIX 16 AB7 LYS A 693 ARG A 707 1 15 HELIX 17 AB8 VAL A 714 ALA A 725 1 12 HELIX 18 AB9 GLY A 730 GLN A 743 1 14 HELIX 19 AC1 ILE A 783 TYR A 788 1 6 HELIX 20 AC2 PRO A 790 VAL A 795 5 6 HELIX 21 AC3 PRO A 816 GLY A 822 1 7 HELIX 22 AC4 SER A 838 GLY A 852 1 15 HELIX 23 AC5 TRP A 901 LYS A 915 1 15 HELIX 24 AC6 HIS A 937 GLY A 948 1 12 HELIX 25 AC7 CYS A 949 LEU A 954 1 6 HELIX 26 AC8 ASP A 979 ASP A 1025 1 47 HELIX 27 AC9 ARG A 1034 ARG A 1045 1 12 HELIX 28 AD1 MET A 1104 TYR A 1111 1 8 HELIX 29 AD2 ARG A 1118 LEU A 1122 5 5 HELIX 30 AD3 THR A 1123 LYS A 1146 1 24 HELIX 31 AD4 THR A 1148 SER A 1177 1 30 HELIX 32 AD5 TYR B 424 ARG B 427 5 4 HELIX 33 AD6 ASP B 436 LEU B 446 1 11 HELIX 34 AD7 ALA B 447 LYS B 449 5 3 HELIX 35 AD8 ASP B 450 ASP B 452 5 3 HELIX 36 AD9 THR B 470 ALA B 476 1 7 HELIX 37 AE1 CYS B 477 GLY B 488 1 12 HELIX 38 AE2 ASP B 513 TRP B 531 1 19 HELIX 39 AE3 TRP B 531 LYS B 536 1 6 HELIX 40 AE4 SER B 568 GLY B 580 1 13 HELIX 41 AE5 ASP B 581 TYR B 586 5 6 HELIX 42 AE6 GLY B 593 SER B 597 5 5 HELIX 43 AE7 GLY B 598 ASN B 608 1 11 HELIX 44 AE8 ILE B 609 ARG B 613 5 5 HELIX 45 AE9 ALA B 621 PHE B 631 1 11 HELIX 46 AF1 LYS B 635 ALA B 648 1 14 HELIX 47 AF2 ARG B 664 ILE B 685 1 22 HELIX 48 AF3 LYS B 693 ARG B 707 1 15 HELIX 49 AF4 VAL B 714 ALA B 725 1 12 HELIX 50 AF5 GLY B 730 GLN B 743 1 14 HELIX 51 AF6 ILE B 783 TYR B 788 1 6 HELIX 52 AF7 PRO B 790 VAL B 795 5 6 HELIX 53 AF8 PRO B 816 GLY B 822 1 7 HELIX 54 AF9 SER B 838 GLY B 852 1 15 HELIX 55 AG1 TRP B 901 LYS B 915 1 15 HELIX 56 AG2 HIS B 937 GLY B 948 1 12 HELIX 57 AG3 CYS B 949 LEU B 954 1 6 HELIX 58 AG4 ASP B 979 ASP B 1025 1 47 HELIX 59 AG5 ARG B 1034 ARG B 1045 1 12 HELIX 60 AG6 MET B 1104 TYR B 1111 1 8 HELIX 61 AG7 TYR B 1111 GLY B 1116 1 6 HELIX 62 AG8 ARG B 1118 LEU B 1122 5 5 HELIX 63 AG9 THR B 1123 LYS B 1146 1 24 HELIX 64 AH1 THR B 1148 SER B 1177 1 30 SHEET 1 AA1 5 PHE A 454 PRO A 458 0 SHEET 2 AA1 5 THR A 429 THR A 433 1 N THR A 429 O GLY A 455 SHEET 3 AA1 5 HIS A 505 ILE A 508 1 O MET A 507 N LEU A 430 SHEET 4 AA1 5 LEU A 541 GLN A 543 1 O GLN A 542 N LEU A 506 SHEET 5 AA1 5 LEU A 614 ASP A 615 -1 O LEU A 614 N GLN A 543 SHEET 1 AA2 3 SER A 565 PHE A 566 0 SHEET 2 AA2 3 VAL A 549 LYS A 550 -1 N VAL A 549 O PHE A 566 SHEET 3 AA2 3 ARG A 589 TYR A 590 -1 O ARG A 589 N LYS A 550 SHEET 1 AA3 3 ILE A 712 LYS A 713 0 SHEET 2 AA3 3 PHE A 777 LEU A 780 -1 O THR A 778 N ILE A 712 SHEET 3 AA3 3 LEU A 754 ASP A 757 -1 N ASP A 757 O PHE A 777 SHEET 1 AA4 2 TYR A 798 ASP A 801 0 SHEET 2 AA4 2 LEU A 804 PRO A 808 -1 O VAL A 806 N LYS A 799 SHEET 1 AA5 3 THR A 868 GLU A 873 0 SHEET 2 AA5 3 LYS A 876 THR A 880 -1 O VAL A 878 N GLU A 870 SHEET 3 AA5 3 ARG A 957 HIS A 961 -1 O ILE A 960 N PHE A 877 SHEET 1 AA6 4 ALA A 883 VAL A 885 0 SHEET 2 AA6 4 VAL A 890 ILE A 893 -1 O GLN A 892 N ASN A 884 SHEET 3 AA6 4 PHE A 932 PHE A 935 -1 O VAL A 934 N VAL A 891 SHEET 4 AA6 4 GLN A 920 GLU A 923 -1 N GLN A 920 O PHE A 935 SHEET 1 AA7 2 ILE A 965 PHE A 968 0 SHEET 2 AA7 2 ILE A 974 TYR A 977 -1 O THR A 975 N ALA A 967 SHEET 1 AA8 5 PHE B 454 VAL B 456 0 SHEET 2 AA8 5 THR B 429 ILE B 431 1 N THR B 429 O GLY B 455 SHEET 3 AA8 5 HIS B 505 ILE B 508 1 O MET B 507 N LEU B 430 SHEET 4 AA8 5 LEU B 541 GLN B 543 1 O GLN B 542 N LEU B 506 SHEET 5 AA8 5 LEU B 614 ASP B 615 -1 O LEU B 614 N GLN B 543 SHEET 1 AA9 3 SER B 565 PHE B 566 0 SHEET 2 AA9 3 VAL B 549 LYS B 550 -1 N VAL B 549 O PHE B 566 SHEET 3 AA9 3 ARG B 589 TYR B 590 -1 O ARG B 589 N LYS B 550 SHEET 1 AB1 3 ILE B 712 LYS B 713 0 SHEET 2 AB1 3 PHE B 777 LEU B 780 -1 O THR B 778 N ILE B 712 SHEET 3 AB1 3 LEU B 754 ASP B 757 -1 N ASP B 757 O PHE B 777 SHEET 1 AB2 2 TYR B 798 ASP B 801 0 SHEET 2 AB2 2 LEU B 804 PRO B 808 -1 O VAL B 806 N LYS B 799 SHEET 1 AB3 2 THR B 823 ILE B 826 0 SHEET 2 AB3 2 ALA B 831 ILE B 834 -1 O ILE B 834 N THR B 823 SHEET 1 AB4 3 THR B 868 GLU B 873 0 SHEET 2 AB4 3 LYS B 876 THR B 880 -1 O VAL B 878 N GLU B 870 SHEET 3 AB4 3 ARG B 957 HIS B 961 -1 O ILE B 960 N PHE B 877 SHEET 1 AB5 4 ALA B 883 VAL B 885 0 SHEET 2 AB5 4 VAL B 890 ILE B 893 -1 O GLN B 892 N ASN B 884 SHEET 3 AB5 4 PHE B 932 LEU B 936 -1 O VAL B 934 N VAL B 891 SHEET 4 AB5 4 VAL B 918 GLU B 923 -1 N GLN B 920 O PHE B 935 SHEET 1 AB6 2 ILE B 965 PHE B 968 0 SHEET 2 AB6 2 ILE B 974 TYR B 977 -1 O THR B 975 N ALA B 967 LINK SG CYS A 477 C4 YWX D 101 1555 1555 1.77 LINK SG CYS B 477 C4 YWX C 101 1555 1555 1.77 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000