HEADER PROTEIN BINDING 10-MAR-23 8GHO TITLE GUCY2C-PEPTIDE BOUND TO ANTI-GUCY2C-SCFV ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-GUCY2C-SCFV ANTIBODY HEAVY CHAIN; COMPND 3 CHAIN: A, H; COMPND 4 FRAGMENT: VH DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ANTI-GUCY2C-SCFV ANTIBODY LIGHT CHAIN; COMPND 8 CHAIN: B, L; COMPND 9 FRAGMENT: VL DOMAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: GUANYLYL CYCLASE C PEPTIDE; COMPND 13 CHAIN: C, G; COMPND 14 SYNONYM: GC-C,HEAT-STABLE ENTEROTOXIN RECEPTOR,STA RECEPTOR,HSTAR, COMPND 15 INTESTINAL GUANYLATE CYCLASE; COMPND 16 EC: 4.6.1.2; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606 KEYWDS BI-SPECIFIC ANTIBODY GUCY2C ANTIGEN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.MOSYAK REVDAT 2 11-OCT-23 8GHO 1 REMARK REVDAT 1 30-AUG-23 8GHO 0 JRNL AUTH P.RAMPURIA,L.MOSYAK,A.R.ROOT,K.SVENSON,M.J.AGOSTINO, JRNL AUTH 2 E.R.LAVALLIE JRNL TITL MOLECULAR INSIGHTS INTO RECOGNITION OF GUCY2C BY T-CELL JRNL TITL 2 ENGAGING BISPECIFIC ANTIBODY ANTI-GUCY2CXCD3. JRNL REF SCI REP V. 13 13408 2023 JRNL REFN ESSN 2045-2322 JRNL PMID 37591971 JRNL DOI 10.1038/S41598-023-40467-0 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 71.4 REMARK 3 NUMBER OF REFLECTIONS : 49431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2528 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.64 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 2.35 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 116 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2358 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 107 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE : 0.2445 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.76 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3923 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 537 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43650 REMARK 3 B22 (A**2) : 1.01330 REMARK 3 B33 (A**2) : -1.44980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.260 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.145 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.122 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.132 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.116 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4013 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5434 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1356 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 669 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4013 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 521 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4907 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -27.9073 72.4596 27.0620 REMARK 3 T TENSOR REMARK 3 T11: -0.0151 T22: -0.0038 REMARK 3 T33: -0.0347 T12: -0.0187 REMARK 3 T13: -0.0021 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 1.0313 L22: 0.4319 REMARK 3 L33: 0.9365 L12: 0.1525 REMARK 3 L13: -0.3251 L23: -0.3184 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: 0.0196 S13: -0.0390 REMARK 3 S21: -0.0152 S22: -0.0398 S23: 0.0066 REMARK 3 S31: -0.0605 S32: -0.0065 S33: 0.0277 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -36.0103 67.7139 48.0485 REMARK 3 T TENSOR REMARK 3 T11: -0.0438 T22: 0.0119 REMARK 3 T33: -0.0218 T12: 0.0219 REMARK 3 T13: 0.0094 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.4099 REMARK 3 L33: 2.0853 L12: 0.1959 REMARK 3 L13: -0.2402 L23: 0.3909 REMARK 3 S TENSOR REMARK 3 S11: -0.0021 S12: 0.0340 S13: -0.0312 REMARK 3 S21: 0.0688 S22: -0.0467 S23: 0.0427 REMARK 3 S31: 0.0338 S32: -0.0053 S33: 0.0489 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -47.4928 64.2695 23.9868 REMARK 3 T TENSOR REMARK 3 T11: -0.0120 T22: 0.0134 REMARK 3 T33: -0.0051 T12: -0.0046 REMARK 3 T13: -0.0254 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.0000 L22: 0.0000 REMARK 3 L33: 0.0000 L12: 0.0952 REMARK 3 L13: 0.0186 L23: 0.0532 REMARK 3 S TENSOR REMARK 3 S11: -0.0005 S12: -0.0008 S13: 0.0008 REMARK 3 S21: 0.0006 S22: 0.0005 S23: 0.0024 REMARK 3 S31: 0.0033 S32: -0.0004 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { G|* } REMARK 3 ORIGIN FOR THE GROUP (A): 19.0742 95.9019 42.3393 REMARK 3 T TENSOR REMARK 3 T11: 0.0031 T22: -0.0014 REMARK 3 T33: -0.0015 T12: -0.0321 REMARK 3 T13: -0.0156 T23: -0.0148 REMARK 3 L TENSOR REMARK 3 L11: 0.0775 L22: 0.0563 REMARK 3 L33: 0.0388 L12: 0.2006 REMARK 3 L13: 0.0946 L23: 0.1468 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: -0.0026 S13: 0.0009 REMARK 3 S21: 0.0037 S22: -0.0012 S23: -0.0025 REMARK 3 S31: 0.0036 S32: 0.0012 S33: 0.0002 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { H|* } REMARK 3 ORIGIN FOR THE GROUP (A): 0.0090 86.5966 44.8020 REMARK 3 T TENSOR REMARK 3 T11: 0.0615 T22: -0.0030 REMARK 3 T33: -0.0663 T12: -0.1064 REMARK 3 T13: 0.0135 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.5696 L22: 0.3299 REMARK 3 L33: 0.9250 L12: 0.2302 REMARK 3 L13: -0.0479 L23: 0.1850 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: -0.0408 S13: -0.0065 REMARK 3 S21: 0.0412 S22: -0.0372 S23: -0.0274 REMARK 3 S31: 0.0565 S32: -0.0377 S33: 0.0228 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { L|* } REMARK 3 ORIGIN FOR THE GROUP (A): 7.0883 87.2592 24.2285 REMARK 3 T TENSOR REMARK 3 T11: -0.0087 T22: -0.0117 REMARK 3 T33: -0.0148 T12: -0.0147 REMARK 3 T13: -0.0031 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.5791 L22: 0.7462 REMARK 3 L33: 0.7630 L12: 0.3624 REMARK 3 L13: 0.1348 L23: 0.1407 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: 0.0462 S13: -0.0303 REMARK 3 S21: 0.0034 S22: -0.0016 S23: -0.0204 REMARK 3 S31: 0.0158 S32: -0.0059 S33: -0.0074 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000272927. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 300K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49431 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.77 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200 MM LITHIUM SULFATE, REMARK 280 BIS-TRIS PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.34000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.35000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.35000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.34000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER C 87 REMARK 465 GLY G 70 REMARK 465 ASP G 71 REMARK 465 SER H 122 REMARK 465 SER L -1 REMARK 465 LYS L 110 REMARK 465 THR L 111 REMARK 465 GLY L 112 REMARK 465 SER L 113 REMARK 465 GLU L 114 REMARK 465 ASN L 115 REMARK 465 LEU L 116 REMARK 465 TYR L 117 REMARK 465 PHE L 118 REMARK 465 GLN L 119 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 29 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 PHE A 29 N - CA - CB ANGL. DEV. = -10.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 29 -57.83 -27.63 REMARK 500 ALA B 55 -36.64 65.01 REMARK 500 SER B 81 77.74 42.82 REMARK 500 ALA B 88 -173.22 -170.23 REMARK 500 ALA B 98 -131.90 49.26 REMARK 500 ARG C 73 -0.21 70.49 REMARK 500 ALA L 55 -36.60 65.29 REMARK 500 SER L 81 79.32 46.89 REMARK 500 ALA L 98 -132.17 49.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 332 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A 333 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B 329 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH H 319 DISTANCE = 6.62 ANGSTROMS DBREF 8GHO A 1 122 PDB 8GHO 8GHO 1 122 DBREF 8GHO B -1 119 PDB 8GHO 8GHO -1 119 DBREF 8GHO C 70 87 UNP P25092 GUC2C_HUMAN 93 110 DBREF 8GHO G 70 87 UNP P25092 GUC2C_HUMAN 93 110 DBREF 8GHO H 1 122 PDB 8GHO 8GHO 1 122 DBREF 8GHO L -1 119 PDB 8GHO 8GHO -1 119 SEQRES 1 A 122 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 A 122 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 A 122 PHE THR PHE SER SER TYR TRP MET HIS TRP VAL ARG GLN SEQRES 4 A 122 ALA PRO GLY LYS GLY LEU GLU TRP ILE GLY GLU ILE LYS SEQRES 5 A 122 PRO SER ASN GLU LEU THR ASN VAL HIS GLU LYS PHE LYS SEQRES 6 A 122 ASP ARG PHE THR ILE SER VAL ASP LYS ALA LYS ASN SER SEQRES 7 A 122 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 A 122 ALA VAL TYR TYR CYS THR ARG THR ILE THR THR THR GLU SEQRES 9 A 122 GLY TYR TRP PHE PHE ASP VAL TRP GLY GLN GLY THR LEU SEQRES 10 A 122 VAL THR VAL SER SER SEQRES 1 B 121 SER GLY ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SEQRES 2 B 121 SER ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG SEQRES 3 B 121 ALA SER GLU SER VAL ASP TYR TYR GLY SER SER LEU LEU SEQRES 4 B 121 GLN TRP TYR GLN GLN LYS PRO GLY LYS ALA PRO LYS LEU SEQRES 5 B 121 LEU ILE TYR ALA ALA SER LYS LEU ALA SER GLY VAL PRO SEQRES 6 B 121 SER ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 B 121 LEU THR ILE SER SER LEU GLN PRO GLU ASP PHE ALA THR SEQRES 8 B 121 TYR TYR CYS GLN GLN THR ARG LYS ALA TYR THR PHE GLY SEQRES 9 B 121 GLN GLY THR LYS LEU GLU ILE LYS THR GLY SER GLU ASN SEQRES 10 B 121 LEU TYR PHE GLN SEQRES 1 C 18 GLY ASP CYS ARG SER SER THR CYS GLU GLY LEU ASP LEU SEQRES 2 C 18 LEU ARG LYS ILE SER SEQRES 1 G 18 GLY ASP CYS ARG SER SER THR CYS GLU GLY LEU ASP LEU SEQRES 2 G 18 LEU ARG LYS ILE SER SEQRES 1 H 122 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 122 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 122 PHE THR PHE SER SER TYR TRP MET HIS TRP VAL ARG GLN SEQRES 4 H 122 ALA PRO GLY LYS GLY LEU GLU TRP ILE GLY GLU ILE LYS SEQRES 5 H 122 PRO SER ASN GLU LEU THR ASN VAL HIS GLU LYS PHE LYS SEQRES 6 H 122 ASP ARG PHE THR ILE SER VAL ASP LYS ALA LYS ASN SER SEQRES 7 H 122 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 122 ALA VAL TYR TYR CYS THR ARG THR ILE THR THR THR GLU SEQRES 9 H 122 GLY TYR TRP PHE PHE ASP VAL TRP GLY GLN GLY THR LEU SEQRES 10 H 122 VAL THR VAL SER SER SEQRES 1 L 121 SER GLY ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SEQRES 2 L 121 SER ALA SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG SEQRES 3 L 121 ALA SER GLU SER VAL ASP TYR TYR GLY SER SER LEU LEU SEQRES 4 L 121 GLN TRP TYR GLN GLN LYS PRO GLY LYS ALA PRO LYS LEU SEQRES 5 L 121 LEU ILE TYR ALA ALA SER LYS LEU ALA SER GLY VAL PRO SEQRES 6 L 121 SER ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 L 121 LEU THR ILE SER SER LEU GLN PRO GLU ASP PHE ALA THR SEQRES 8 L 121 TYR TYR CYS GLN GLN THR ARG LYS ALA TYR THR PHE GLY SEQRES 9 L 121 GLN GLY THR LYS LEU GLU ILE LYS THR GLY SER GLU ASN SEQRES 10 L 121 LEU TYR PHE GLN FORMUL 7 HOH *537(H2 O) HELIX 1 AA1 THR A 28 TYR A 32 5 5 HELIX 2 AA2 ARG A 87 THR A 91 5 5 HELIX 3 AA3 GLN B 83 PHE B 87 5 5 HELIX 4 AA4 SER C 74 ILE C 86 1 13 HELIX 5 AA5 SER G 74 SER G 87 1 14 HELIX 6 AA6 THR H 28 TYR H 32 5 5 HELIX 7 AA7 ARG H 87 THR H 91 5 5 HELIX 8 AA8 GLN L 83 PHE L 87 5 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N VAL A 5 SHEET 3 AA1 4 SER A 78 MET A 83 -1 O MET A 83 N LEU A 18 SHEET 4 AA1 4 PHE A 68 ASP A 73 -1 N THR A 69 O GLN A 82 SHEET 1 AA2 6 GLY A 10 VAL A 12 0 SHEET 2 AA2 6 THR A 116 VAL A 120 1 O THR A 119 N VAL A 12 SHEET 3 AA2 6 ALA A 92 THR A 101 -1 N TYR A 94 O THR A 116 SHEET 4 AA2 6 TRP A 33 GLN A 39 -1 N HIS A 35 O THR A 97 SHEET 5 AA2 6 LEU A 45 LYS A 52 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 LEU A 57 VAL A 60 -1 O ASN A 59 N GLU A 50 SHEET 1 AA3 4 GLY A 10 VAL A 12 0 SHEET 2 AA3 4 THR A 116 VAL A 120 1 O THR A 119 N VAL A 12 SHEET 3 AA3 4 ALA A 92 THR A 101 -1 N TYR A 94 O THR A 116 SHEET 4 AA3 4 TRP A 107 TRP A 112 -1 O PHE A 108 N ILE A 100 SHEET 1 AA4 4 LEU B 4 SER B 7 0 SHEET 2 AA4 4 VAL B 19 ALA B 25 -1 O THR B 22 N SER B 7 SHEET 3 AA4 4 ASP B 74 ILE B 79 -1 O LEU B 77 N ILE B 21 SHEET 4 AA4 4 PHE B 66 SER B 71 -1 N SER B 67 O THR B 78 SHEET 1 AA5 6 SER B 10 ALA B 13 0 SHEET 2 AA5 6 THR B 105 ILE B 109 1 O GLU B 108 N LEU B 11 SHEET 3 AA5 6 ALA B 88 GLN B 94 -1 N ALA B 88 O LEU B 107 SHEET 4 AA5 6 LEU B 37 GLN B 42 -1 N GLN B 38 O GLN B 93 SHEET 5 AA5 6 LYS B 49 TYR B 53 -1 O LEU B 51 N TRP B 39 SHEET 6 AA5 6 LYS B 57 LEU B 58 -1 O LYS B 57 N TYR B 53 SHEET 1 AA6 4 SER B 10 ALA B 13 0 SHEET 2 AA6 4 THR B 105 ILE B 109 1 O GLU B 108 N LEU B 11 SHEET 3 AA6 4 ALA B 88 GLN B 94 -1 N ALA B 88 O LEU B 107 SHEET 4 AA6 4 THR B 100 PHE B 101 -1 O THR B 100 N GLN B 94 SHEET 1 AA7 2 ASP B 30 TYR B 31 0 SHEET 2 AA7 2 SER B 34 SER B 35 -1 O SER B 34 N TYR B 31 SHEET 1 AA8 4 GLN H 3 SER H 7 0 SHEET 2 AA8 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA8 4 SER H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA8 4 PHE H 68 ASP H 73 -1 N THR H 69 O GLN H 82 SHEET 1 AA9 6 LEU H 11 VAL H 12 0 SHEET 2 AA9 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA9 6 ALA H 92 THR H 101 -1 N TYR H 94 O THR H 116 SHEET 4 AA9 6 MET H 34 GLN H 39 -1 N HIS H 35 O THR H 97 SHEET 5 AA9 6 LEU H 45 LYS H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA9 6 LEU H 57 VAL H 60 -1 O LEU H 57 N LYS H 52 SHEET 1 AB1 4 LEU H 11 VAL H 12 0 SHEET 2 AB1 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AB1 4 ALA H 92 THR H 101 -1 N TYR H 94 O THR H 116 SHEET 4 AB1 4 TRP H 107 TRP H 112 -1 O PHE H 108 N ILE H 100 SHEET 1 AB2 4 LEU L 4 SER L 7 0 SHEET 2 AB2 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AB2 4 ASP L 74 ILE L 79 -1 O LEU L 77 N ILE L 21 SHEET 4 AB2 4 PHE L 66 SER L 71 -1 N SER L 67 O THR L 78 SHEET 1 AB3 6 SER L 10 SER L 12 0 SHEET 2 AB3 6 THR L 105 GLU L 108 1 O GLU L 108 N LEU L 11 SHEET 3 AB3 6 ALA L 88 GLN L 94 -1 N ALA L 88 O LEU L 107 SHEET 4 AB3 6 LEU L 37 GLN L 42 -1 N GLN L 38 O GLN L 93 SHEET 5 AB3 6 LYS L 49 TYR L 53 -1 O LEU L 51 N TRP L 39 SHEET 6 AB3 6 LYS L 57 LEU L 58 -1 O LYS L 57 N TYR L 53 SHEET 1 AB4 4 SER L 10 SER L 12 0 SHEET 2 AB4 4 THR L 105 GLU L 108 1 O GLU L 108 N LEU L 11 SHEET 3 AB4 4 ALA L 88 GLN L 94 -1 N ALA L 88 O LEU L 107 SHEET 4 AB4 4 THR L 100 PHE L 101 -1 O THR L 100 N GLN L 94 SHEET 1 AB5 2 ASP L 30 TYR L 31 0 SHEET 2 AB5 2 SER L 34 SER L 35 -1 O SER L 34 N TYR L 31 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.04 SSBOND 2 CYS B 23 CYS B 92 1555 1555 2.06 SSBOND 3 CYS C 72 CYS C 77 1555 1555 2.04 SSBOND 4 CYS G 72 CYS G 77 1555 1555 2.04 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.04 SSBOND 6 CYS L 23 CYS L 92 1555 1555 2.05 CISPEP 1 SER B 7 PRO B 8 0 -2.76 CISPEP 2 SER L 7 PRO L 8 0 -2.67 CRYST1 70.680 80.570 90.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014148 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011025 0.00000