data_8GI8 # _entry.id 8GI8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8GI8 pdb_00008gi8 10.2210/pdb8gi8/pdb WWPDB D_1000272951 ? ? EMDB EMD-40062 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-26 2 'Structure model' 1 1 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8GI8 _pdbx_database_status.recvd_initial_deposition_date 2023-03-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-40062 'associated EM volume' EMDB . EMD-40063 'other EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 oliver.ernst@utoronto.ca Oliver Ernst P 'principal investigator/group leader' 0000-0002-8863-9444 5 John.L.Spudich@uth.tmc.edu John Spudich L 'principal investigator/group leader' 0000-0003-4167-8590 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Morizumi, T.' 1 0000-0002-2785-209X 'Kim, K.' 2 0000-0002-1870-7296 'Li, H.' 3 0000-0002-3969-6709 'Spudich, J.L.' 4 0000-0003-4167-8590 'Ernst, O.P.' 5 0000-0002-8863-9444 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 4365 _citation.page_last 4365 _citation.title 'Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K + and Na + selectivities.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-40041-2 _citation.pdbx_database_id_PubMed 37474513 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Morizumi, T.' 1 ? primary 'Kim, K.' 2 ? primary 'Li, H.' 3 ? primary 'Govorunova, E.G.' 4 ? primary 'Sineshchekov, O.A.' 5 ? primary 'Wang, Y.' 6 ? primary 'Zheng, L.' 7 ? primary 'Bertalan, E.' 8 ? primary 'Bondar, A.N.' 9 ? primary 'Askari, A.' 10 ? primary 'Brown, L.S.' 11 ? primary 'Spudich, J.L.' 12 ? primary 'Ernst, O.P.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Kalium Channelrhodopsin 1' 30515.744 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn CHOLESTEROL 386.654 3 ? ? ? ? 5 non-polymer syn 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 744.034 5 ? ? ? ? 6 water nat water 18.015 15 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MPFYDSRPPEGWPKGSINDMDYPLLGSICAVCCVFVAGSGIWMLYRLDLGMGYSCKPYKSGRAPEVNSLSGIICLLCGTM YAAKSFDFFDGGGTPFSLNWYWYLDYVFTCPLLILDFAFTLDLPHKIRYFFAVFLTLWCGVAAFVTPSAYRFAYYALGCC WFTPFALSLMRHVKERYLVYPPKCQRWLFWACVIFFGFWPMFPILFIFSWLGTGHISQQAFYIIHAFLDLTCKSIFGILM TVFRLELEEHTEVQGLPLNEPETLS ; _entity_poly.pdbx_seq_one_letter_code_can ;MPFYDSRPPEGWPKGSINDMDYPLLGSICAVCCVFVAGSGIWMLYRLDLGMGYSCKPYKSGRAPEVNSLSGIICLLCGTM YAAKSFDFFDGGGTPFSLNWYWYLDYVFTCPLLILDFAFTLDLPHKIRYFFAVFLTLWCGVAAFVTPSAYRFAYYALGCC WFTPFALSLMRHVKERYLVYPPKCQRWLFWACVIFFGFWPMFPILFIFSWLGTGHISQQAFYIIHAFLDLTCKSIFGILM TVFRLELEEHTEVQGLPLNEPETLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 'SODIUM ION' NA 4 CHOLESTEROL CLR 5 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine PEE 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PRO n 1 3 PHE n 1 4 TYR n 1 5 ASP n 1 6 SER n 1 7 ARG n 1 8 PRO n 1 9 PRO n 1 10 GLU n 1 11 GLY n 1 12 TRP n 1 13 PRO n 1 14 LYS n 1 15 GLY n 1 16 SER n 1 17 ILE n 1 18 ASN n 1 19 ASP n 1 20 MET n 1 21 ASP n 1 22 TYR n 1 23 PRO n 1 24 LEU n 1 25 LEU n 1 26 GLY n 1 27 SER n 1 28 ILE n 1 29 CYS n 1 30 ALA n 1 31 VAL n 1 32 CYS n 1 33 CYS n 1 34 VAL n 1 35 PHE n 1 36 VAL n 1 37 ALA n 1 38 GLY n 1 39 SER n 1 40 GLY n 1 41 ILE n 1 42 TRP n 1 43 MET n 1 44 LEU n 1 45 TYR n 1 46 ARG n 1 47 LEU n 1 48 ASP n 1 49 LEU n 1 50 GLY n 1 51 MET n 1 52 GLY n 1 53 TYR n 1 54 SER n 1 55 CYS n 1 56 LYS n 1 57 PRO n 1 58 TYR n 1 59 LYS n 1 60 SER n 1 61 GLY n 1 62 ARG n 1 63 ALA n 1 64 PRO n 1 65 GLU n 1 66 VAL n 1 67 ASN n 1 68 SER n 1 69 LEU n 1 70 SER n 1 71 GLY n 1 72 ILE n 1 73 ILE n 1 74 CYS n 1 75 LEU n 1 76 LEU n 1 77 CYS n 1 78 GLY n 1 79 THR n 1 80 MET n 1 81 TYR n 1 82 ALA n 1 83 ALA n 1 84 LYS n 1 85 SER n 1 86 PHE n 1 87 ASP n 1 88 PHE n 1 89 PHE n 1 90 ASP n 1 91 GLY n 1 92 GLY n 1 93 GLY n 1 94 THR n 1 95 PRO n 1 96 PHE n 1 97 SER n 1 98 LEU n 1 99 ASN n 1 100 TRP n 1 101 TYR n 1 102 TRP n 1 103 TYR n 1 104 LEU n 1 105 ASP n 1 106 TYR n 1 107 VAL n 1 108 PHE n 1 109 THR n 1 110 CYS n 1 111 PRO n 1 112 LEU n 1 113 LEU n 1 114 ILE n 1 115 LEU n 1 116 ASP n 1 117 PHE n 1 118 ALA n 1 119 PHE n 1 120 THR n 1 121 LEU n 1 122 ASP n 1 123 LEU n 1 124 PRO n 1 125 HIS n 1 126 LYS n 1 127 ILE n 1 128 ARG n 1 129 TYR n 1 130 PHE n 1 131 PHE n 1 132 ALA n 1 133 VAL n 1 134 PHE n 1 135 LEU n 1 136 THR n 1 137 LEU n 1 138 TRP n 1 139 CYS n 1 140 GLY n 1 141 VAL n 1 142 ALA n 1 143 ALA n 1 144 PHE n 1 145 VAL n 1 146 THR n 1 147 PRO n 1 148 SER n 1 149 ALA n 1 150 TYR n 1 151 ARG n 1 152 PHE n 1 153 ALA n 1 154 TYR n 1 155 TYR n 1 156 ALA n 1 157 LEU n 1 158 GLY n 1 159 CYS n 1 160 CYS n 1 161 TRP n 1 162 PHE n 1 163 THR n 1 164 PRO n 1 165 PHE n 1 166 ALA n 1 167 LEU n 1 168 SER n 1 169 LEU n 1 170 MET n 1 171 ARG n 1 172 HIS n 1 173 VAL n 1 174 LYS n 1 175 GLU n 1 176 ARG n 1 177 TYR n 1 178 LEU n 1 179 VAL n 1 180 TYR n 1 181 PRO n 1 182 PRO n 1 183 LYS n 1 184 CYS n 1 185 GLN n 1 186 ARG n 1 187 TRP n 1 188 LEU n 1 189 PHE n 1 190 TRP n 1 191 ALA n 1 192 CYS n 1 193 VAL n 1 194 ILE n 1 195 PHE n 1 196 PHE n 1 197 GLY n 1 198 PHE n 1 199 TRP n 1 200 PRO n 1 201 MET n 1 202 PHE n 1 203 PRO n 1 204 ILE n 1 205 LEU n 1 206 PHE n 1 207 ILE n 1 208 PHE n 1 209 SER n 1 210 TRP n 1 211 LEU n 1 212 GLY n 1 213 THR n 1 214 GLY n 1 215 HIS n 1 216 ILE n 1 217 SER n 1 218 GLN n 1 219 GLN n 1 220 ALA n 1 221 PHE n 1 222 TYR n 1 223 ILE n 1 224 ILE n 1 225 HIS n 1 226 ALA n 1 227 PHE n 1 228 LEU n 1 229 ASP n 1 230 LEU n 1 231 THR n 1 232 CYS n 1 233 LYS n 1 234 SER n 1 235 ILE n 1 236 PHE n 1 237 GLY n 1 238 ILE n 1 239 LEU n 1 240 MET n 1 241 THR n 1 242 VAL n 1 243 PHE n 1 244 ARG n 1 245 LEU n 1 246 GLU n 1 247 LEU n 1 248 GLU n 1 249 GLU n 1 250 HIS n 1 251 THR n 1 252 GLU n 1 253 VAL n 1 254 GLN n 1 255 GLY n 1 256 LEU n 1 257 PRO n 1 258 LEU n 1 259 ASN n 1 260 GLU n 1 261 PRO n 1 262 GLU n 1 263 THR n 1 264 LEU n 1 265 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 265 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Hyphochytrium catenoides' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 42384 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Komagataella pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name HcKCR1_pPICZalpha-A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CLR non-polymer . CHOLESTEROL ? 'C27 H46 O' 386.654 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PEE non-polymer n 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine DOPE 'C41 H78 N O8 P' 744.034 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 PHE 3 3 ? ? ? A . n A 1 4 TYR 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 SER 6 6 ? ? ? A . n A 1 7 ARG 7 7 ? ? ? A . n A 1 8 PRO 8 8 ? ? ? A . n A 1 9 PRO 9 9 ? ? ? A . n A 1 10 GLU 10 10 ? ? ? A . n A 1 11 GLY 11 11 ? ? ? A . n A 1 12 TRP 12 12 ? ? ? A . n A 1 13 PRO 13 13 ? ? ? A . n A 1 14 LYS 14 14 ? ? ? A . n A 1 15 GLY 15 15 ? ? ? A . n A 1 16 SER 16 16 ? ? ? A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 MET 43 43 43 MET MET A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 TYR 45 45 45 TYR TYR A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 MET 51 51 51 MET MET A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 CYS 55 55 55 CYS CYS A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 CYS 74 74 74 CYS CYS A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 MET 80 80 80 MET MET A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 TRP 102 102 102 TRP TRP A . n A 1 103 TYR 103 103 103 TYR TYR A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 ASP 105 105 105 ASP ASP A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 VAL 107 107 107 VAL VAL A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 CYS 110 110 110 CYS CYS A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 PHE 119 119 119 PHE PHE A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 HIS 125 125 125 HIS HIS A . n A 1 126 LYS 126 126 126 LYS LYS A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 VAL 133 133 133 VAL VAL A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 CYS 139 139 139 CYS CYS A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 PHE 144 144 144 PHE PHE A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 TYR 155 155 155 TYR TYR A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 CYS 159 159 159 CYS CYS A . n A 1 160 CYS 160 160 160 CYS CYS A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 THR 163 163 163 THR THR A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 PHE 165 165 165 PHE PHE A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 MET 170 170 170 MET MET A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 TYR 177 177 177 TYR TYR A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 VAL 179 179 179 VAL VAL A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 CYS 184 184 184 CYS CYS A . n A 1 185 GLN 185 185 185 GLN GLN A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 TRP 187 187 187 TRP TRP A . n A 1 188 LEU 188 188 188 LEU LEU A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 TRP 190 190 190 TRP TRP A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 CYS 192 192 192 CYS CYS A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 ILE 194 194 194 ILE ILE A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 TRP 199 199 199 TRP TRP A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 PHE 202 202 202 PHE PHE A . n A 1 203 PRO 203 203 203 PRO PRO A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 TRP 210 210 210 TRP TRP A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 THR 213 213 213 THR THR A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 HIS 215 215 215 HIS HIS A . n A 1 216 ILE 216 216 216 ILE ILE A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 ALA 220 220 220 ALA ALA A . n A 1 221 PHE 221 221 221 PHE PHE A . n A 1 222 TYR 222 222 222 TYR TYR A . n A 1 223 ILE 223 223 223 ILE ILE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 HIS 225 225 225 HIS HIS A . n A 1 226 ALA 226 226 226 ALA ALA A . n A 1 227 PHE 227 227 227 PHE PHE A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 THR 231 231 231 THR THR A . n A 1 232 CYS 232 232 232 CYS CYS A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 SER 234 234 234 SER SER A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 PHE 236 236 236 PHE PHE A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 MET 240 240 240 MET MET A . n A 1 241 THR 241 241 241 THR THR A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 ARG 244 244 244 ARG ARG A . n A 1 245 LEU 245 245 245 LEU LEU A . n A 1 246 GLU 246 246 246 GLU GLU A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 GLU 248 248 248 GLU GLU A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 HIS 250 250 250 HIS HIS A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 GLU 252 252 252 GLU GLU A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 PRO 257 257 ? ? ? A . n A 1 258 LEU 258 258 ? ? ? A . n A 1 259 ASN 259 259 ? ? ? A . n A 1 260 GLU 260 260 ? ? ? A . n A 1 261 PRO 261 261 ? ? ? A . n A 1 262 GLU 262 262 ? ? ? A . n A 1 263 THR 263 263 ? ? ? A . n A 1 264 LEU 264 264 ? ? ? A . n A 1 265 SER 265 265 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 301 301 RET RET A . C 3 NA 1 302 1 NA NA A . D 4 CLR 1 303 307 CLR CLR A . E 4 CLR 1 304 308 CLR CLR A . F 4 CLR 1 305 309 CLR CLR A . G 5 PEE 1 306 310 PEE PEE A . H 5 PEE 1 307 311 PEE PEE A . I 5 PEE 1 308 312 PEE PEE A . J 5 PEE 1 309 313 PEE PEE A . K 5 PEE 1 310 314 PEE PEE A . L 6 HOH 1 401 4 HOH HOH A . L 6 HOH 2 402 9 HOH HOH A . L 6 HOH 3 403 14 HOH HOH A . L 6 HOH 4 404 2 HOH HOH A . L 6 HOH 5 405 1 HOH HOH A . L 6 HOH 6 406 5 HOH HOH A . L 6 HOH 7 407 10 HOH HOH A . L 6 HOH 8 408 6 HOH HOH A . L 6 HOH 9 409 8 HOH HOH A . L 6 HOH 10 410 13 HOH HOH A . L 6 HOH 11 411 15 HOH HOH A . L 6 HOH 12 412 11 HOH HOH A . L 6 HOH 13 413 12 HOH HOH A . L 6 HOH 14 414 3 HOH HOH A . L 6 HOH 15 415 7 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? phenix.real_space_refine ? ? ? 1.20.1_4487 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8GI8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8GI8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8GI8 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 66.71 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8GI8 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0035 ? 2393 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.4496 ? 3211 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0339 ? 320 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0033 ? 351 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 17.8554 ? 889 ? f_dihedral_angle_d ? ? # _struct.entry_id 8GI8 _struct.title 'Kalium channelrhodopsin 1 from Hyphochytrium catenoides (HcKCR1) embedded in peptidisc' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8GI8 _struct_keywords.text 'Retinal Protein, Channelrhodopsin, Cation channel, Peptidisc, Optogenetics, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8GI8 _struct_ref.pdbx_db_accession 8GI8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8GI8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 265 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8GI8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 265 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 265 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete point assembly' ? trimeric 3 2 'point asymmetric unit' ? monomeric 1 3 'point asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-3)' A,B,C,D,E,F,G,H,I,J,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 P A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? 0.91521101 -0.40297495 0.00000000 -67.53320 0.40297495 0.91521101 0.00000000 -173.78964 0.00000000 0.00000000 1.00000000 -122.46279 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? -0.50000000 -0.86602540 0.00000000 311.93679 0.86602540 -0.50000000 0.00000000 83.58322 0.00000000 0.00000000 1.00000000 0.00000 3 'point symmetry operation' ? ? -0.50000000 0.86602540 0.00000000 83.58321 -0.86602540 -0.50000000 0.00000000 311.93679 0.00000000 0.00000000 1.00000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 21 ? ASP A 48 ? ASP A 21 ASP A 48 1 ? 28 HELX_P HELX_P2 AA2 SER A 68 ? GLY A 91 ? SER A 68 GLY A 91 1 ? 24 HELX_P HELX_P3 AA3 LEU A 104 ? PHE A 108 ? LEU A 104 PHE A 108 5 ? 5 HELX_P HELX_P4 AA4 THR A 109 ? LEU A 121 ? THR A 109 LEU A 121 1 ? 13 HELX_P HELX_P5 AA5 HIS A 125 ? VAL A 145 ? HIS A 125 VAL A 145 1 ? 21 HELX_P HELX_P6 AA6 TYR A 150 ? LEU A 178 ? TYR A 150 LEU A 178 1 ? 29 HELX_P HELX_P7 AA7 PRO A 181 ? TRP A 199 ? PRO A 181 TRP A 199 1 ? 19 HELX_P HELX_P8 AA8 PRO A 200 ? SER A 209 ? PRO A 200 SER A 209 1 ? 10 HELX_P HELX_P9 AA9 SER A 217 ? LYS A 233 ? SER A 217 LYS A 233 1 ? 17 HELX_P HELX_P10 AB1 LYS A 233 ? GLU A 252 ? LYS A 233 GLU A 252 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 233 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 233 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.442 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 57 ? ? -81.27 45.21 2 1 TYR A 58 ? ? 60.74 165.97 3 1 PHE A 96 ? ? -100.87 77.64 4 1 TYR A 103 ? ? 69.30 -1.17 5 1 ASP A 122 ? ? 39.08 53.25 6 1 SER A 209 ? ? -69.35 -179.67 # _pdbx_point_symmetry.entry_id 8GI8 _pdbx_point_symmetry.Schoenflies_symbol C _pdbx_point_symmetry.circular_symmetry 3 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _pdbx_entry_details.entry_id 8GI8 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8GI8 _em_3d_fitting.method ? _em_3d_fitting.target_criteria 'Cross correlation coefficent' _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 158.5 _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 8GI8 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.88 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 297015 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Kalium channelrhodopsin 1 trimer reconstituted into nanodiscs' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 8GI8 _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4096 _em_image_scans.dimension_width 4096 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8GI8 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2400 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 75000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER/RHODIUM _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type Homemade _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8GI8 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8GI8 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8GI8 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C3 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A PHE 3 ? A PHE 3 4 1 Y 1 A TYR 4 ? A TYR 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A SER 6 ? A SER 6 7 1 Y 1 A ARG 7 ? A ARG 7 8 1 Y 1 A PRO 8 ? A PRO 8 9 1 Y 1 A PRO 9 ? A PRO 9 10 1 Y 1 A GLU 10 ? A GLU 10 11 1 Y 1 A GLY 11 ? A GLY 11 12 1 Y 1 A TRP 12 ? A TRP 12 13 1 Y 1 A PRO 13 ? A PRO 13 14 1 Y 1 A LYS 14 ? A LYS 14 15 1 Y 1 A GLY 15 ? A GLY 15 16 1 Y 1 A SER 16 ? A SER 16 17 1 Y 1 A PRO 257 ? A PRO 257 18 1 Y 1 A LEU 258 ? A LEU 258 19 1 Y 1 A ASN 259 ? A ASN 259 20 1 Y 1 A GLU 260 ? A GLU 260 21 1 Y 1 A PRO 261 ? A PRO 261 22 1 Y 1 A GLU 262 ? A GLU 262 23 1 Y 1 A THR 263 ? A THR 263 24 1 Y 1 A LEU 264 ? A LEU 264 25 1 Y 1 A SER 265 ? A SER 265 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CLR C1 C N N 74 CLR C2 C N N 75 CLR C3 C N S 76 CLR C4 C N N 77 CLR C5 C N N 78 CLR C6 C N N 79 CLR C7 C N N 80 CLR C8 C N S 81 CLR C9 C N S 82 CLR C10 C N R 83 CLR C11 C N N 84 CLR C12 C N N 85 CLR C13 C N R 86 CLR C14 C N S 87 CLR C15 C N N 88 CLR C16 C N N 89 CLR C17 C N R 90 CLR C18 C N N 91 CLR C19 C N N 92 CLR C20 C N R 93 CLR C21 C N N 94 CLR C22 C N N 95 CLR C23 C N N 96 CLR C24 C N N 97 CLR C25 C N N 98 CLR C26 C N N 99 CLR C27 C N N 100 CLR O1 O N N 101 CLR H11 H N N 102 CLR H12 H N N 103 CLR H21 H N N 104 CLR H22 H N N 105 CLR H3 H N N 106 CLR H41 H N N 107 CLR H42 H N N 108 CLR H6 H N N 109 CLR H71 H N N 110 CLR H72 H N N 111 CLR H8 H N N 112 CLR H9 H N N 113 CLR H111 H N N 114 CLR H112 H N N 115 CLR H121 H N N 116 CLR H122 H N N 117 CLR H14 H N N 118 CLR H151 H N N 119 CLR H152 H N N 120 CLR H161 H N N 121 CLR H162 H N N 122 CLR H17 H N N 123 CLR H181 H N N 124 CLR H182 H N N 125 CLR H183 H N N 126 CLR H191 H N N 127 CLR H192 H N N 128 CLR H193 H N N 129 CLR H20 H N N 130 CLR H211 H N N 131 CLR H212 H N N 132 CLR H213 H N N 133 CLR H221 H N N 134 CLR H222 H N N 135 CLR H231 H N N 136 CLR H232 H N N 137 CLR H241 H N N 138 CLR H242 H N N 139 CLR H25 H N N 140 CLR H261 H N N 141 CLR H262 H N N 142 CLR H263 H N N 143 CLR H271 H N N 144 CLR H272 H N N 145 CLR H273 H N N 146 CLR H1 H N N 147 CYS N N N N 148 CYS CA C N R 149 CYS C C N N 150 CYS O O N N 151 CYS CB C N N 152 CYS SG S N N 153 CYS OXT O N N 154 CYS H H N N 155 CYS H2 H N N 156 CYS HA H N N 157 CYS HB2 H N N 158 CYS HB3 H N N 159 CYS HG H N N 160 CYS HXT H N N 161 GLN N N N N 162 GLN CA C N S 163 GLN C C N N 164 GLN O O N N 165 GLN CB C N N 166 GLN CG C N N 167 GLN CD C N N 168 GLN OE1 O N N 169 GLN NE2 N N N 170 GLN OXT O N N 171 GLN H H N N 172 GLN H2 H N N 173 GLN HA H N N 174 GLN HB2 H N N 175 GLN HB3 H N N 176 GLN HG2 H N N 177 GLN HG3 H N N 178 GLN HE21 H N N 179 GLN HE22 H N N 180 GLN HXT H N N 181 GLU N N N N 182 GLU CA C N S 183 GLU C C N N 184 GLU O O N N 185 GLU CB C N N 186 GLU CG C N N 187 GLU CD C N N 188 GLU OE1 O N N 189 GLU OE2 O N N 190 GLU OXT O N N 191 GLU H H N N 192 GLU H2 H N N 193 GLU HA H N N 194 GLU HB2 H N N 195 GLU HB3 H N N 196 GLU HG2 H N N 197 GLU HG3 H N N 198 GLU HE2 H N N 199 GLU HXT H N N 200 GLY N N N N 201 GLY CA C N N 202 GLY C C N N 203 GLY O O N N 204 GLY OXT O N N 205 GLY H H N N 206 GLY H2 H N N 207 GLY HA2 H N N 208 GLY HA3 H N N 209 GLY HXT H N N 210 HIS N N N N 211 HIS CA C N S 212 HIS C C N N 213 HIS O O N N 214 HIS CB C N N 215 HIS CG C Y N 216 HIS ND1 N Y N 217 HIS CD2 C Y N 218 HIS CE1 C Y N 219 HIS NE2 N Y N 220 HIS OXT O N N 221 HIS H H N N 222 HIS H2 H N N 223 HIS HA H N N 224 HIS HB2 H N N 225 HIS HB3 H N N 226 HIS HD1 H N N 227 HIS HD2 H N N 228 HIS HE1 H N N 229 HIS HE2 H N N 230 HIS HXT H N N 231 HOH O O N N 232 HOH H1 H N N 233 HOH H2 H N N 234 ILE N N N N 235 ILE CA C N S 236 ILE C C N N 237 ILE O O N N 238 ILE CB C N S 239 ILE CG1 C N N 240 ILE CG2 C N N 241 ILE CD1 C N N 242 ILE OXT O N N 243 ILE H H N N 244 ILE H2 H N N 245 ILE HA H N N 246 ILE HB H N N 247 ILE HG12 H N N 248 ILE HG13 H N N 249 ILE HG21 H N N 250 ILE HG22 H N N 251 ILE HG23 H N N 252 ILE HD11 H N N 253 ILE HD12 H N N 254 ILE HD13 H N N 255 ILE HXT H N N 256 LEU N N N N 257 LEU CA C N S 258 LEU C C N N 259 LEU O O N N 260 LEU CB C N N 261 LEU CG C N N 262 LEU CD1 C N N 263 LEU CD2 C N N 264 LEU OXT O N N 265 LEU H H N N 266 LEU H2 H N N 267 LEU HA H N N 268 LEU HB2 H N N 269 LEU HB3 H N N 270 LEU HG H N N 271 LEU HD11 H N N 272 LEU HD12 H N N 273 LEU HD13 H N N 274 LEU HD21 H N N 275 LEU HD22 H N N 276 LEU HD23 H N N 277 LEU HXT H N N 278 LYS N N N N 279 LYS CA C N S 280 LYS C C N N 281 LYS O O N N 282 LYS CB C N N 283 LYS CG C N N 284 LYS CD C N N 285 LYS CE C N N 286 LYS NZ N N N 287 LYS OXT O N N 288 LYS H H N N 289 LYS H2 H N N 290 LYS HA H N N 291 LYS HB2 H N N 292 LYS HB3 H N N 293 LYS HG2 H N N 294 LYS HG3 H N N 295 LYS HD2 H N N 296 LYS HD3 H N N 297 LYS HE2 H N N 298 LYS HE3 H N N 299 LYS HZ1 H N N 300 LYS HZ2 H N N 301 LYS HZ3 H N N 302 LYS HXT H N N 303 MET N N N N 304 MET CA C N S 305 MET C C N N 306 MET O O N N 307 MET CB C N N 308 MET CG C N N 309 MET SD S N N 310 MET CE C N N 311 MET OXT O N N 312 MET H H N N 313 MET H2 H N N 314 MET HA H N N 315 MET HB2 H N N 316 MET HB3 H N N 317 MET HG2 H N N 318 MET HG3 H N N 319 MET HE1 H N N 320 MET HE2 H N N 321 MET HE3 H N N 322 MET HXT H N N 323 NA NA NA N N 324 PEE C27 C N N 325 PEE C26 C N N 326 PEE C25 C N N 327 PEE C24 C N N 328 PEE C23 C N N 329 PEE C22 C N N 330 PEE C21 C N N 331 PEE C20 C N N 332 PEE C19 C N N 333 PEE C18 C N N 334 PEE C17 C N N 335 PEE C16 C N N 336 PEE C15 C N N 337 PEE C14 C N N 338 PEE C13 C N N 339 PEE C12 C N N 340 PEE C11 C N N 341 PEE C10 C N N 342 PEE O4 O N N 343 PEE O2 O N N 344 PEE C2 C N R 345 PEE C1 C N N 346 PEE O3P O N N 347 PEE P P N N 348 PEE O2P O N N 349 PEE O1P O N N 350 PEE O4P O N N 351 PEE C4 C N N 352 PEE C5 C N N 353 PEE N N N N 354 PEE C3 C N N 355 PEE O3 O N N 356 PEE C30 C N N 357 PEE O5 O N N 358 PEE C31 C N N 359 PEE C32 C N N 360 PEE C33 C N N 361 PEE C34 C N N 362 PEE C35 C N N 363 PEE C36 C N N 364 PEE C37 C N N 365 PEE C38 C N N 366 PEE C39 C N N 367 PEE C40 C N N 368 PEE C41 C N N 369 PEE C42 C N N 370 PEE C43 C N N 371 PEE C44 C N N 372 PEE C45 C N N 373 PEE C46 C N N 374 PEE C47 C N N 375 PEE H7 H N N 376 PEE H8 H N N 377 PEE H82 H N N 378 PEE H5 H N N 379 PEE H6 H N N 380 PEE H12 H N N 381 PEE H4 H N N 382 PEE H10 H N N 383 PEE H11 H N N 384 PEE H83 H N N 385 PEE H9 H N N 386 PEE H2 H N N 387 PEE H3 H N N 388 PEE H14 H N N 389 PEE H1 H N N 390 PEE H16 H N N 391 PEE H13 H N N 392 PEE H18 H N N 393 PEE H20 H N N 394 PEE H22 H N N 395 PEE H19 H N N 396 PEE H21 H N N 397 PEE H28 H N N 398 PEE H23 H N N 399 PEE H24 H N N 400 PEE H25 H N N 401 PEE H26 H N N 402 PEE H17 H N N 403 PEE H27 H N N 404 PEE H15 H N N 405 PEE H29 H N N 406 PEE H30 H N N 407 PEE H31 H N N 408 PEE H32 H N N 409 PEE H33 H N N 410 PEE H34 H N N 411 PEE H35 H N N 412 PEE H36 H N N 413 PEE H37 H N N 414 PEE H38 H N N 415 PEE H39 H N N 416 PEE H40 H N N 417 PEE H41 H N N 418 PEE H43 H N N 419 PEE H44 H N N 420 PEE H45 H N N 421 PEE H46 H N N 422 PEE H47 H N N 423 PEE H48 H N N 424 PEE H49 H N N 425 PEE H50 H N N 426 PEE H51 H N N 427 PEE H52 H N N 428 PEE H53 H N N 429 PEE H54 H N N 430 PEE H55 H N N 431 PEE H56 H N N 432 PEE H57 H N N 433 PEE H58 H N N 434 PEE H59 H N N 435 PEE H60 H N N 436 PEE H81 H N N 437 PEE H61 H N N 438 PEE H80 H N N 439 PEE H62 H N N 440 PEE H63 H N N 441 PEE H64 H N N 442 PEE H65 H N N 443 PEE H66 H N N 444 PEE H67 H N N 445 PEE H68 H N N 446 PEE H69 H N N 447 PEE H70 H N N 448 PEE H71 H N N 449 PEE H72 H N N 450 PEE H73 H N N 451 PEE H74 H N N 452 PEE H75 H N N 453 PHE N N N N 454 PHE CA C N S 455 PHE C C N N 456 PHE O O N N 457 PHE CB C N N 458 PHE CG C Y N 459 PHE CD1 C Y N 460 PHE CD2 C Y N 461 PHE CE1 C Y N 462 PHE CE2 C Y N 463 PHE CZ C Y N 464 PHE OXT O N N 465 PHE H H N N 466 PHE H2 H N N 467 PHE HA H N N 468 PHE HB2 H N N 469 PHE HB3 H N N 470 PHE HD1 H N N 471 PHE HD2 H N N 472 PHE HE1 H N N 473 PHE HE2 H N N 474 PHE HZ H N N 475 PHE HXT H N N 476 PRO N N N N 477 PRO CA C N S 478 PRO C C N N 479 PRO O O N N 480 PRO CB C N N 481 PRO CG C N N 482 PRO CD C N N 483 PRO OXT O N N 484 PRO H H N N 485 PRO HA H N N 486 PRO HB2 H N N 487 PRO HB3 H N N 488 PRO HG2 H N N 489 PRO HG3 H N N 490 PRO HD2 H N N 491 PRO HD3 H N N 492 PRO HXT H N N 493 RET C1 C N N 494 RET C2 C N N 495 RET C3 C N N 496 RET C4 C N N 497 RET C5 C N N 498 RET C6 C N N 499 RET C7 C N N 500 RET C8 C N N 501 RET C9 C N N 502 RET C10 C N N 503 RET C11 C N N 504 RET C12 C N N 505 RET C13 C N N 506 RET C14 C N N 507 RET C15 C N N 508 RET O1 O N N 509 RET C16 C N N 510 RET C17 C N N 511 RET C18 C N N 512 RET C19 C N N 513 RET C20 C N N 514 RET H21 H N N 515 RET H22 H N N 516 RET H31 H N N 517 RET H32 H N N 518 RET H41 H N N 519 RET H42 H N N 520 RET H7 H N N 521 RET H8 H N N 522 RET H10 H N N 523 RET H11 H N N 524 RET H12 H N N 525 RET H14 H N N 526 RET H15 H N N 527 RET H161 H N N 528 RET H162 H N N 529 RET H163 H N N 530 RET H171 H N N 531 RET H172 H N N 532 RET H173 H N N 533 RET H181 H N N 534 RET H182 H N N 535 RET H183 H N N 536 RET H191 H N N 537 RET H192 H N N 538 RET H193 H N N 539 RET H201 H N N 540 RET H202 H N N 541 RET H203 H N N 542 SER N N N N 543 SER CA C N S 544 SER C C N N 545 SER O O N N 546 SER CB C N N 547 SER OG O N N 548 SER OXT O N N 549 SER H H N N 550 SER H2 H N N 551 SER HA H N N 552 SER HB2 H N N 553 SER HB3 H N N 554 SER HG H N N 555 SER HXT H N N 556 THR N N N N 557 THR CA C N S 558 THR C C N N 559 THR O O N N 560 THR CB C N R 561 THR OG1 O N N 562 THR CG2 C N N 563 THR OXT O N N 564 THR H H N N 565 THR H2 H N N 566 THR HA H N N 567 THR HB H N N 568 THR HG1 H N N 569 THR HG21 H N N 570 THR HG22 H N N 571 THR HG23 H N N 572 THR HXT H N N 573 TRP N N N N 574 TRP CA C N S 575 TRP C C N N 576 TRP O O N N 577 TRP CB C N N 578 TRP CG C Y N 579 TRP CD1 C Y N 580 TRP CD2 C Y N 581 TRP NE1 N Y N 582 TRP CE2 C Y N 583 TRP CE3 C Y N 584 TRP CZ2 C Y N 585 TRP CZ3 C Y N 586 TRP CH2 C Y N 587 TRP OXT O N N 588 TRP H H N N 589 TRP H2 H N N 590 TRP HA H N N 591 TRP HB2 H N N 592 TRP HB3 H N N 593 TRP HD1 H N N 594 TRP HE1 H N N 595 TRP HE3 H N N 596 TRP HZ2 H N N 597 TRP HZ3 H N N 598 TRP HH2 H N N 599 TRP HXT H N N 600 TYR N N N N 601 TYR CA C N S 602 TYR C C N N 603 TYR O O N N 604 TYR CB C N N 605 TYR CG C Y N 606 TYR CD1 C Y N 607 TYR CD2 C Y N 608 TYR CE1 C Y N 609 TYR CE2 C Y N 610 TYR CZ C Y N 611 TYR OH O N N 612 TYR OXT O N N 613 TYR H H N N 614 TYR H2 H N N 615 TYR HA H N N 616 TYR HB2 H N N 617 TYR HB3 H N N 618 TYR HD1 H N N 619 TYR HD2 H N N 620 TYR HE1 H N N 621 TYR HE2 H N N 622 TYR HH H N N 623 TYR HXT H N N 624 VAL N N N N 625 VAL CA C N S 626 VAL C C N N 627 VAL O O N N 628 VAL CB C N N 629 VAL CG1 C N N 630 VAL CG2 C N N 631 VAL OXT O N N 632 VAL H H N N 633 VAL H2 H N N 634 VAL HA H N N 635 VAL HB H N N 636 VAL HG11 H N N 637 VAL HG12 H N N 638 VAL HG13 H N N 639 VAL HG21 H N N 640 VAL HG22 H N N 641 VAL HG23 H N N 642 VAL HXT H N N 643 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CLR C1 C2 sing N N 70 CLR C1 C10 sing N N 71 CLR C1 H11 sing N N 72 CLR C1 H12 sing N N 73 CLR C2 C3 sing N N 74 CLR C2 H21 sing N N 75 CLR C2 H22 sing N N 76 CLR C3 C4 sing N N 77 CLR C3 O1 sing N N 78 CLR C3 H3 sing N N 79 CLR C4 C5 sing N N 80 CLR C4 H41 sing N N 81 CLR C4 H42 sing N N 82 CLR C5 C6 doub N N 83 CLR C5 C10 sing N N 84 CLR C6 C7 sing N N 85 CLR C6 H6 sing N N 86 CLR C7 C8 sing N N 87 CLR C7 H71 sing N N 88 CLR C7 H72 sing N N 89 CLR C8 C9 sing N N 90 CLR C8 C14 sing N N 91 CLR C8 H8 sing N N 92 CLR C9 C10 sing N N 93 CLR C9 C11 sing N N 94 CLR C9 H9 sing N N 95 CLR C10 C19 sing N N 96 CLR C11 C12 sing N N 97 CLR C11 H111 sing N N 98 CLR C11 H112 sing N N 99 CLR C12 C13 sing N N 100 CLR C12 H121 sing N N 101 CLR C12 H122 sing N N 102 CLR C13 C14 sing N N 103 CLR C13 C17 sing N N 104 CLR C13 C18 sing N N 105 CLR C14 C15 sing N N 106 CLR C14 H14 sing N N 107 CLR C15 C16 sing N N 108 CLR C15 H151 sing N N 109 CLR C15 H152 sing N N 110 CLR C16 C17 sing N N 111 CLR C16 H161 sing N N 112 CLR C16 H162 sing N N 113 CLR C17 C20 sing N N 114 CLR C17 H17 sing N N 115 CLR C18 H181 sing N N 116 CLR C18 H182 sing N N 117 CLR C18 H183 sing N N 118 CLR C19 H191 sing N N 119 CLR C19 H192 sing N N 120 CLR C19 H193 sing N N 121 CLR C20 C21 sing N N 122 CLR C20 C22 sing N N 123 CLR C20 H20 sing N N 124 CLR C21 H211 sing N N 125 CLR C21 H212 sing N N 126 CLR C21 H213 sing N N 127 CLR C22 C23 sing N N 128 CLR C22 H221 sing N N 129 CLR C22 H222 sing N N 130 CLR C23 C24 sing N N 131 CLR C23 H231 sing N N 132 CLR C23 H232 sing N N 133 CLR C24 C25 sing N N 134 CLR C24 H241 sing N N 135 CLR C24 H242 sing N N 136 CLR C25 C26 sing N N 137 CLR C25 C27 sing N N 138 CLR C25 H25 sing N N 139 CLR C26 H261 sing N N 140 CLR C26 H262 sing N N 141 CLR C26 H263 sing N N 142 CLR C27 H271 sing N N 143 CLR C27 H272 sing N N 144 CLR C27 H273 sing N N 145 CLR O1 H1 sing N N 146 CYS N CA sing N N 147 CYS N H sing N N 148 CYS N H2 sing N N 149 CYS CA C sing N N 150 CYS CA CB sing N N 151 CYS CA HA sing N N 152 CYS C O doub N N 153 CYS C OXT sing N N 154 CYS CB SG sing N N 155 CYS CB HB2 sing N N 156 CYS CB HB3 sing N N 157 CYS SG HG sing N N 158 CYS OXT HXT sing N N 159 GLN N CA sing N N 160 GLN N H sing N N 161 GLN N H2 sing N N 162 GLN CA C sing N N 163 GLN CA CB sing N N 164 GLN CA HA sing N N 165 GLN C O doub N N 166 GLN C OXT sing N N 167 GLN CB CG sing N N 168 GLN CB HB2 sing N N 169 GLN CB HB3 sing N N 170 GLN CG CD sing N N 171 GLN CG HG2 sing N N 172 GLN CG HG3 sing N N 173 GLN CD OE1 doub N N 174 GLN CD NE2 sing N N 175 GLN NE2 HE21 sing N N 176 GLN NE2 HE22 sing N N 177 GLN OXT HXT sing N N 178 GLU N CA sing N N 179 GLU N H sing N N 180 GLU N H2 sing N N 181 GLU CA C sing N N 182 GLU CA CB sing N N 183 GLU CA HA sing N N 184 GLU C O doub N N 185 GLU C OXT sing N N 186 GLU CB CG sing N N 187 GLU CB HB2 sing N N 188 GLU CB HB3 sing N N 189 GLU CG CD sing N N 190 GLU CG HG2 sing N N 191 GLU CG HG3 sing N N 192 GLU CD OE1 doub N N 193 GLU CD OE2 sing N N 194 GLU OE2 HE2 sing N N 195 GLU OXT HXT sing N N 196 GLY N CA sing N N 197 GLY N H sing N N 198 GLY N H2 sing N N 199 GLY CA C sing N N 200 GLY CA HA2 sing N N 201 GLY CA HA3 sing N N 202 GLY C O doub N N 203 GLY C OXT sing N N 204 GLY OXT HXT sing N N 205 HIS N CA sing N N 206 HIS N H sing N N 207 HIS N H2 sing N N 208 HIS CA C sing N N 209 HIS CA CB sing N N 210 HIS CA HA sing N N 211 HIS C O doub N N 212 HIS C OXT sing N N 213 HIS CB CG sing N N 214 HIS CB HB2 sing N N 215 HIS CB HB3 sing N N 216 HIS CG ND1 sing Y N 217 HIS CG CD2 doub Y N 218 HIS ND1 CE1 doub Y N 219 HIS ND1 HD1 sing N N 220 HIS CD2 NE2 sing Y N 221 HIS CD2 HD2 sing N N 222 HIS CE1 NE2 sing Y N 223 HIS CE1 HE1 sing N N 224 HIS NE2 HE2 sing N N 225 HIS OXT HXT sing N N 226 HOH O H1 sing N N 227 HOH O H2 sing N N 228 ILE N CA sing N N 229 ILE N H sing N N 230 ILE N H2 sing N N 231 ILE CA C sing N N 232 ILE CA CB sing N N 233 ILE CA HA sing N N 234 ILE C O doub N N 235 ILE C OXT sing N N 236 ILE CB CG1 sing N N 237 ILE CB CG2 sing N N 238 ILE CB HB sing N N 239 ILE CG1 CD1 sing N N 240 ILE CG1 HG12 sing N N 241 ILE CG1 HG13 sing N N 242 ILE CG2 HG21 sing N N 243 ILE CG2 HG22 sing N N 244 ILE CG2 HG23 sing N N 245 ILE CD1 HD11 sing N N 246 ILE CD1 HD12 sing N N 247 ILE CD1 HD13 sing N N 248 ILE OXT HXT sing N N 249 LEU N CA sing N N 250 LEU N H sing N N 251 LEU N H2 sing N N 252 LEU CA C sing N N 253 LEU CA CB sing N N 254 LEU CA HA sing N N 255 LEU C O doub N N 256 LEU C OXT sing N N 257 LEU CB CG sing N N 258 LEU CB HB2 sing N N 259 LEU CB HB3 sing N N 260 LEU CG CD1 sing N N 261 LEU CG CD2 sing N N 262 LEU CG HG sing N N 263 LEU CD1 HD11 sing N N 264 LEU CD1 HD12 sing N N 265 LEU CD1 HD13 sing N N 266 LEU CD2 HD21 sing N N 267 LEU CD2 HD22 sing N N 268 LEU CD2 HD23 sing N N 269 LEU OXT HXT sing N N 270 LYS N CA sing N N 271 LYS N H sing N N 272 LYS N H2 sing N N 273 LYS CA C sing N N 274 LYS CA CB sing N N 275 LYS CA HA sing N N 276 LYS C O doub N N 277 LYS C OXT sing N N 278 LYS CB CG sing N N 279 LYS CB HB2 sing N N 280 LYS CB HB3 sing N N 281 LYS CG CD sing N N 282 LYS CG HG2 sing N N 283 LYS CG HG3 sing N N 284 LYS CD CE sing N N 285 LYS CD HD2 sing N N 286 LYS CD HD3 sing N N 287 LYS CE NZ sing N N 288 LYS CE HE2 sing N N 289 LYS CE HE3 sing N N 290 LYS NZ HZ1 sing N N 291 LYS NZ HZ2 sing N N 292 LYS NZ HZ3 sing N N 293 LYS OXT HXT sing N N 294 MET N CA sing N N 295 MET N H sing N N 296 MET N H2 sing N N 297 MET CA C sing N N 298 MET CA CB sing N N 299 MET CA HA sing N N 300 MET C O doub N N 301 MET C OXT sing N N 302 MET CB CG sing N N 303 MET CB HB2 sing N N 304 MET CB HB3 sing N N 305 MET CG SD sing N N 306 MET CG HG2 sing N N 307 MET CG HG3 sing N N 308 MET SD CE sing N N 309 MET CE HE1 sing N N 310 MET CE HE2 sing N N 311 MET CE HE3 sing N N 312 MET OXT HXT sing N N 313 PEE N C5 sing N N 314 PEE C5 C4 sing N N 315 PEE C4 O4P sing N N 316 PEE O4P P sing N N 317 PEE O1P P doub N N 318 PEE C1 O3P sing N N 319 PEE C1 C2 sing N N 320 PEE O3P P sing N N 321 PEE P O2P sing N N 322 PEE C2 C3 sing N N 323 PEE C2 O2 sing N N 324 PEE C3 O3 sing N N 325 PEE O2 C10 sing N N 326 PEE C31 C30 sing N N 327 PEE C31 C32 sing N N 328 PEE C33 C32 sing N N 329 PEE C33 C34 sing N N 330 PEE C30 O3 sing N N 331 PEE C30 O5 doub N N 332 PEE C10 O4 doub N N 333 PEE C10 C11 sing N N 334 PEE C34 C35 sing N N 335 PEE C11 C12 sing N N 336 PEE C35 C36 sing N N 337 PEE C36 C37 sing N N 338 PEE C37 C38 sing N N 339 PEE C38 C39 doub N Z 340 PEE C12 C13 sing N N 341 PEE C39 C40 sing N N 342 PEE C13 C14 sing N N 343 PEE C14 C15 sing N N 344 PEE C40 C41 sing N N 345 PEE C15 C16 sing N N 346 PEE C41 C42 sing N N 347 PEE C16 C17 sing N N 348 PEE C42 C43 sing N N 349 PEE C17 C18 sing N N 350 PEE C43 C44 sing N N 351 PEE C18 C19 doub N Z 352 PEE C46 C47 sing N N 353 PEE C46 C45 sing N N 354 PEE C44 C45 sing N N 355 PEE C19 C20 sing N N 356 PEE C20 C21 sing N N 357 PEE C21 C22 sing N N 358 PEE C22 C23 sing N N 359 PEE C23 C24 sing N N 360 PEE C24 C25 sing N N 361 PEE C26 C25 sing N N 362 PEE C26 C27 sing N N 363 PEE C27 H7 sing N N 364 PEE C27 H8 sing N N 365 PEE C27 H82 sing N N 366 PEE C26 H5 sing N N 367 PEE C26 H6 sing N N 368 PEE C25 H12 sing N N 369 PEE C25 H4 sing N N 370 PEE C24 H10 sing N N 371 PEE C24 H11 sing N N 372 PEE C23 H83 sing N N 373 PEE C23 H9 sing N N 374 PEE C22 H2 sing N N 375 PEE C22 H3 sing N N 376 PEE C21 H14 sing N N 377 PEE C21 H1 sing N N 378 PEE C20 H16 sing N N 379 PEE C20 H13 sing N N 380 PEE C19 H18 sing N N 381 PEE C18 H20 sing N N 382 PEE C17 H22 sing N N 383 PEE C17 H19 sing N N 384 PEE C16 H21 sing N N 385 PEE C16 H28 sing N N 386 PEE C15 H23 sing N N 387 PEE C15 H24 sing N N 388 PEE C14 H25 sing N N 389 PEE C14 H26 sing N N 390 PEE C13 H17 sing N N 391 PEE C13 H27 sing N N 392 PEE C12 H15 sing N N 393 PEE C12 H29 sing N N 394 PEE C11 H30 sing N N 395 PEE C11 H31 sing N N 396 PEE C2 H32 sing N N 397 PEE C1 H33 sing N N 398 PEE C1 H34 sing N N 399 PEE O2P H35 sing N N 400 PEE C4 H36 sing N N 401 PEE C4 H37 sing N N 402 PEE C5 H38 sing N N 403 PEE C5 H39 sing N N 404 PEE N H40 sing N N 405 PEE N H41 sing N N 406 PEE C3 H43 sing N N 407 PEE C3 H44 sing N N 408 PEE C31 H45 sing N N 409 PEE C31 H46 sing N N 410 PEE C32 H47 sing N N 411 PEE C32 H48 sing N N 412 PEE C33 H49 sing N N 413 PEE C33 H50 sing N N 414 PEE C34 H51 sing N N 415 PEE C34 H52 sing N N 416 PEE C35 H53 sing N N 417 PEE C35 H54 sing N N 418 PEE C36 H55 sing N N 419 PEE C36 H56 sing N N 420 PEE C37 H57 sing N N 421 PEE C37 H58 sing N N 422 PEE C38 H59 sing N N 423 PEE C39 H60 sing N N 424 PEE C40 H81 sing N N 425 PEE C40 H61 sing N N 426 PEE C41 H80 sing N N 427 PEE C41 H62 sing N N 428 PEE C42 H63 sing N N 429 PEE C42 H64 sing N N 430 PEE C43 H65 sing N N 431 PEE C43 H66 sing N N 432 PEE C44 H67 sing N N 433 PEE C44 H68 sing N N 434 PEE C45 H69 sing N N 435 PEE C45 H70 sing N N 436 PEE C46 H71 sing N N 437 PEE C46 H72 sing N N 438 PEE C47 H73 sing N N 439 PEE C47 H74 sing N N 440 PEE C47 H75 sing N N 441 PHE N CA sing N N 442 PHE N H sing N N 443 PHE N H2 sing N N 444 PHE CA C sing N N 445 PHE CA CB sing N N 446 PHE CA HA sing N N 447 PHE C O doub N N 448 PHE C OXT sing N N 449 PHE CB CG sing N N 450 PHE CB HB2 sing N N 451 PHE CB HB3 sing N N 452 PHE CG CD1 doub Y N 453 PHE CG CD2 sing Y N 454 PHE CD1 CE1 sing Y N 455 PHE CD1 HD1 sing N N 456 PHE CD2 CE2 doub Y N 457 PHE CD2 HD2 sing N N 458 PHE CE1 CZ doub Y N 459 PHE CE1 HE1 sing N N 460 PHE CE2 CZ sing Y N 461 PHE CE2 HE2 sing N N 462 PHE CZ HZ sing N N 463 PHE OXT HXT sing N N 464 PRO N CA sing N N 465 PRO N CD sing N N 466 PRO N H sing N N 467 PRO CA C sing N N 468 PRO CA CB sing N N 469 PRO CA HA sing N N 470 PRO C O doub N N 471 PRO C OXT sing N N 472 PRO CB CG sing N N 473 PRO CB HB2 sing N N 474 PRO CB HB3 sing N N 475 PRO CG CD sing N N 476 PRO CG HG2 sing N N 477 PRO CG HG3 sing N N 478 PRO CD HD2 sing N N 479 PRO CD HD3 sing N N 480 PRO OXT HXT sing N N 481 RET C1 C2 sing N N 482 RET C1 C6 sing N N 483 RET C1 C16 sing N N 484 RET C1 C17 sing N N 485 RET C2 C3 sing N N 486 RET C2 H21 sing N N 487 RET C2 H22 sing N N 488 RET C3 C4 sing N N 489 RET C3 H31 sing N N 490 RET C3 H32 sing N N 491 RET C4 C5 sing N N 492 RET C4 H41 sing N N 493 RET C4 H42 sing N N 494 RET C5 C6 doub N N 495 RET C5 C18 sing N N 496 RET C6 C7 sing N N 497 RET C7 C8 doub N E 498 RET C7 H7 sing N N 499 RET C8 C9 sing N N 500 RET C8 H8 sing N N 501 RET C9 C10 doub N E 502 RET C9 C19 sing N N 503 RET C10 C11 sing N N 504 RET C10 H10 sing N N 505 RET C11 C12 doub N E 506 RET C11 H11 sing N N 507 RET C12 C13 sing N N 508 RET C12 H12 sing N N 509 RET C13 C14 doub N E 510 RET C13 C20 sing N N 511 RET C14 C15 sing N N 512 RET C14 H14 sing N N 513 RET C15 O1 doub N N 514 RET C15 H15 sing N N 515 RET C16 H161 sing N N 516 RET C16 H162 sing N N 517 RET C16 H163 sing N N 518 RET C17 H171 sing N N 519 RET C17 H172 sing N N 520 RET C17 H173 sing N N 521 RET C18 H181 sing N N 522 RET C18 H182 sing N N 523 RET C18 H183 sing N N 524 RET C19 H191 sing N N 525 RET C19 H192 sing N N 526 RET C19 H193 sing N N 527 RET C20 H201 sing N N 528 RET C20 H202 sing N N 529 RET C20 H203 sing N N 530 SER N CA sing N N 531 SER N H sing N N 532 SER N H2 sing N N 533 SER CA C sing N N 534 SER CA CB sing N N 535 SER CA HA sing N N 536 SER C O doub N N 537 SER C OXT sing N N 538 SER CB OG sing N N 539 SER CB HB2 sing N N 540 SER CB HB3 sing N N 541 SER OG HG sing N N 542 SER OXT HXT sing N N 543 THR N CA sing N N 544 THR N H sing N N 545 THR N H2 sing N N 546 THR CA C sing N N 547 THR CA CB sing N N 548 THR CA HA sing N N 549 THR C O doub N N 550 THR C OXT sing N N 551 THR CB OG1 sing N N 552 THR CB CG2 sing N N 553 THR CB HB sing N N 554 THR OG1 HG1 sing N N 555 THR CG2 HG21 sing N N 556 THR CG2 HG22 sing N N 557 THR CG2 HG23 sing N N 558 THR OXT HXT sing N N 559 TRP N CA sing N N 560 TRP N H sing N N 561 TRP N H2 sing N N 562 TRP CA C sing N N 563 TRP CA CB sing N N 564 TRP CA HA sing N N 565 TRP C O doub N N 566 TRP C OXT sing N N 567 TRP CB CG sing N N 568 TRP CB HB2 sing N N 569 TRP CB HB3 sing N N 570 TRP CG CD1 doub Y N 571 TRP CG CD2 sing Y N 572 TRP CD1 NE1 sing Y N 573 TRP CD1 HD1 sing N N 574 TRP CD2 CE2 doub Y N 575 TRP CD2 CE3 sing Y N 576 TRP NE1 CE2 sing Y N 577 TRP NE1 HE1 sing N N 578 TRP CE2 CZ2 sing Y N 579 TRP CE3 CZ3 doub Y N 580 TRP CE3 HE3 sing N N 581 TRP CZ2 CH2 doub Y N 582 TRP CZ2 HZ2 sing N N 583 TRP CZ3 CH2 sing Y N 584 TRP CZ3 HZ3 sing N N 585 TRP CH2 HH2 sing N N 586 TRP OXT HXT sing N N 587 TYR N CA sing N N 588 TYR N H sing N N 589 TYR N H2 sing N N 590 TYR CA C sing N N 591 TYR CA CB sing N N 592 TYR CA HA sing N N 593 TYR C O doub N N 594 TYR C OXT sing N N 595 TYR CB CG sing N N 596 TYR CB HB2 sing N N 597 TYR CB HB3 sing N N 598 TYR CG CD1 doub Y N 599 TYR CG CD2 sing Y N 600 TYR CD1 CE1 sing Y N 601 TYR CD1 HD1 sing N N 602 TYR CD2 CE2 doub Y N 603 TYR CD2 HD2 sing N N 604 TYR CE1 CZ doub Y N 605 TYR CE1 HE1 sing N N 606 TYR CE2 CZ sing Y N 607 TYR CE2 HE2 sing N N 608 TYR CZ OH sing N N 609 TYR OH HH sing N N 610 TYR OXT HXT sing N N 611 VAL N CA sing N N 612 VAL N H sing N N 613 VAL N H2 sing N N 614 VAL CA C sing N N 615 VAL CA CB sing N N 616 VAL CA HA sing N N 617 VAL C O doub N N 618 VAL C OXT sing N N 619 VAL CB CG1 sing N N 620 VAL CB CG2 sing N N 621 VAL CB HB sing N N 622 VAL CG1 HG11 sing N N 623 VAL CG1 HG12 sing N N 624 VAL CG1 HG13 sing N N 625 VAL CG2 HG21 sing N N 626 VAL CG2 HG22 sing N N 627 VAL CG2 HG23 sing N N 628 VAL OXT HXT sing N N 629 # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 150 mM NaCl 1 'Sodium Chloride' 1 20 mM C8H18N2O4S 2 HEPES # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.03049385 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 42384 _em_entity_assembly_naturalsource.organism 'Hyphochytrium catenoides' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 4922 _em_entity_assembly_recombinant.organism 'Komagataella pastoris' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details 'Falcon 4i detector. Images were reference corrected.' _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details 'Images collected in movie mode, 30 fractions per movie, Falcon 4i detector' _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model OTHER _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 12104 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 5692131 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.1 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.1 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? PHENIX 1.20 OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 9 1 ? ? cryoSPARC 4.1 'FINAL EULER ASSIGNMENT' ? 10 1 ? ? cryoSPARC 4.1 CLASSIFICATION ? 11 1 ? ? cryoSPARC 4.1 RECONSTRUCTION ? 12 1 ? ? cryoSPARC 4.1 'MODEL REFINEMENT' ? 13 ? 1 ? PHENIX 1.20 'MODEL REFINEMENT' ? 14 ? 1 ? Coot 0.8.9.1 'VOLUME SELECTION' ? 15 1 1 1 ? ? 'SERIES ALIGNMENT' ? 16 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 17 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 18 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 19 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 20 1 1 1 ? ? # _em_specimen.concentration 0.35 _em_specimen.details 'Sample was kept in the dark prior to freezing.' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Natural Sciences and Engineering Research Council (NSERC, Canada)' Canada RGPIN-2018-04397 1 'Natural Sciences and Engineering Research Council (NSERC, Canada)' Canada RGPIN-2017-06862 2 'Canadian Institutes of Health Research (CIHR)' Canada PJT-159464 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 8GI8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N NA O P S # loop_