HEADER VIRAL PROTEIN 13-MAR-23 8GIA TITLE CRYSTAL STRUCTURE OF SARS-COV-2 (COVID-19) NSP3 MACRODOMAIN IN COMPLEX TITLE 2 WITH TFMU-ADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-STRUCTURAL PROTEIN 3; COMPND 3 CHAIN: C, A; COMPND 4 SYNONYM: NSP3, PL2-PRO, PAPAIN-LIKE PROTEASE, PAPAIN-LIKE PROTEINASE, COMPND 5 PL-PRO; COMPND 6 EC: 3.4.19.121, 3.4.22.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS MACRODOMAIN, SARS-COV, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.D.WALLACE,S.R.BAGDE,J.C.FROMME REVDAT 3 25-OCT-23 8GIA 1 REMARK REVDAT 2 31-MAY-23 8GIA 1 JRNL REVDAT 1 17-MAY-23 8GIA 0 JRNL AUTH A.ANMANGANDLA,S.JANA,K.PENG,S.D.WALLACE,S.R.BAGDE,B.S.DROWN, JRNL AUTH 2 J.XU,P.J.HERGENROTHER,J.C.FROMME,H.LIN JRNL TITL A FLUORESCENCE POLARIZATION ASSAY FOR MACRODOMAINS JRNL TITL 2 FACILITATES THE IDENTIFICATION OF POTENT INHIBITORS OF THE JRNL TITL 3 SARS-COV-2 MACRODOMAIN. JRNL REF ACS CHEM.BIOL. V. 18 1200 2023 JRNL REFN ESSN 1554-8937 JRNL PMID 37126856 JRNL DOI 10.1021/ACSCHEMBIO.3C00092 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 27629 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 68.9200 - 4.0000 0.99 2735 156 0.1877 0.2148 REMARK 3 2 4.0000 - 3.1800 1.00 2695 125 0.1792 0.2445 REMARK 3 3 3.1800 - 2.7800 0.99 2612 137 0.2078 0.2434 REMARK 3 4 2.7700 - 2.5200 1.00 2646 133 0.2023 0.2696 REMARK 3 5 2.5200 - 2.3400 0.99 2604 139 0.2230 0.2961 REMARK 3 6 2.3400 - 2.2000 1.00 2615 145 0.2202 0.3068 REMARK 3 7 2.2000 - 2.0900 0.98 2561 148 0.2326 0.2703 REMARK 3 8 2.0900 - 2.0000 0.99 2588 131 0.2558 0.2846 REMARK 3 9 2.0000 - 1.9200 0.99 2633 97 0.3101 0.4235 REMARK 3 10 1.9200 - 1.8600 0.99 2585 144 0.3210 0.3609 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.293 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.008 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2691 REMARK 3 ANGLE : 0.728 3678 REMARK 3 CHIRALITY : 0.045 431 REMARK 3 PLANARITY : 0.003 458 REMARK 3 DIHEDRAL : 12.577 934 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 4 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8058 -11.9846 -3.7700 REMARK 3 T TENSOR REMARK 3 T11: 0.1708 T22: 0.3350 REMARK 3 T33: 0.2960 T12: 0.0176 REMARK 3 T13: 0.0662 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 7.7047 L22: 3.3803 REMARK 3 L33: 2.2812 L12: 1.3963 REMARK 3 L13: 0.3663 L23: -0.1385 REMARK 3 S TENSOR REMARK 3 S11: -0.2248 S12: 0.5458 S13: -0.0981 REMARK 3 S21: -0.3408 S22: 0.1851 S23: -0.3503 REMARK 3 S31: 0.0238 S32: 0.2145 S33: 0.0244 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 40 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -31.8309 -13.5577 -0.4001 REMARK 3 T TENSOR REMARK 3 T11: 0.1566 T22: 0.4628 REMARK 3 T33: 0.3507 T12: 0.0028 REMARK 3 T13: -0.0180 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 2.8449 L22: 8.1650 REMARK 3 L33: 5.2861 L12: -4.5564 REMARK 3 L13: 1.6587 L23: -0.7375 REMARK 3 S TENSOR REMARK 3 S11: -0.0183 S12: 0.4883 S13: -0.2007 REMARK 3 S21: -0.1659 S22: 0.3967 S23: 0.7479 REMARK 3 S31: 0.4097 S32: -0.5424 S33: -0.4233 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 48 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.5794 -10.2378 -9.8940 REMARK 3 T TENSOR REMARK 3 T11: 0.1807 T22: 0.5773 REMARK 3 T33: 0.3415 T12: 0.0237 REMARK 3 T13: 0.0454 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 6.6785 L22: 4.8506 REMARK 3 L33: 4.3675 L12: 1.6849 REMARK 3 L13: 4.7051 L23: 1.8579 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: 1.3056 S13: 0.3075 REMARK 3 S21: -0.5765 S22: 0.0137 S23: -0.0260 REMARK 3 S31: -0.3371 S32: -0.2516 S33: -0.0298 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 60 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.4038 -21.1738 -5.7375 REMARK 3 T TENSOR REMARK 3 T11: 0.2333 T22: 0.5097 REMARK 3 T33: 0.2772 T12: -0.0793 REMARK 3 T13: 0.0457 T23: -0.0717 REMARK 3 L TENSOR REMARK 3 L11: 9.6410 L22: 9.6434 REMARK 3 L33: 9.0171 L12: 7.6816 REMARK 3 L13: -8.3926 L23: -7.3191 REMARK 3 S TENSOR REMARK 3 S11: -0.2835 S12: -0.0295 S13: -0.5290 REMARK 3 S21: -0.1273 S22: -0.2982 S23: -0.0540 REMARK 3 S31: 0.3675 S32: 0.2382 S33: 0.6715 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.0990 -17.1912 1.9868 REMARK 3 T TENSOR REMARK 3 T11: 0.1122 T22: 0.2854 REMARK 3 T33: 0.2177 T12: 0.0305 REMARK 3 T13: -0.0297 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 4.8945 L22: 3.2186 REMARK 3 L33: 4.7868 L12: 1.1538 REMARK 3 L13: -1.7742 L23: -0.1390 REMARK 3 S TENSOR REMARK 3 S11: -0.1765 S12: -0.1969 S13: -0.2290 REMARK 3 S21: 0.1495 S22: -0.0105 S23: 0.1221 REMARK 3 S31: 0.3063 S32: -0.5595 S33: 0.1818 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 106 THROUGH 135 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.9461 -15.1267 7.0888 REMARK 3 T TENSOR REMARK 3 T11: 0.1135 T22: 0.2711 REMARK 3 T33: 0.2260 T12: -0.0187 REMARK 3 T13: -0.0164 T23: -0.0283 REMARK 3 L TENSOR REMARK 3 L11: 5.1732 L22: 4.6420 REMARK 3 L33: 4.9898 L12: -0.3136 REMARK 3 L13: 0.1582 L23: -0.9990 REMARK 3 S TENSOR REMARK 3 S11: -0.0971 S12: -0.4806 S13: 0.0963 REMARK 3 S21: 0.2685 S22: 0.0707 S23: -0.2002 REMARK 3 S31: 0.2239 S32: -0.2637 S33: -0.0179 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 136 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4921 -11.5840 7.2010 REMARK 3 T TENSOR REMARK 3 T11: 0.1087 T22: 0.3803 REMARK 3 T33: 0.2763 T12: 0.0230 REMARK 3 T13: -0.0092 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 4.0041 L22: 6.9766 REMARK 3 L33: 7.4955 L12: 0.6216 REMARK 3 L13: -0.7732 L23: -2.8138 REMARK 3 S TENSOR REMARK 3 S11: -0.0230 S12: -0.7610 S13: -0.0475 REMARK 3 S21: 0.3312 S22: -0.2804 S23: -0.2256 REMARK 3 S31: -0.0191 S32: 0.3863 S33: 0.2861 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 158 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1161 -0.4881 7.1959 REMARK 3 T TENSOR REMARK 3 T11: 0.3749 T22: 0.3672 REMARK 3 T33: 0.5006 T12: -0.0935 REMARK 3 T13: -0.0220 T23: -0.1120 REMARK 3 L TENSOR REMARK 3 L11: 3.1538 L22: 8.5045 REMARK 3 L33: 7.0918 L12: -4.5005 REMARK 3 L13: 0.2009 L23: -3.7955 REMARK 3 S TENSOR REMARK 3 S11: -0.2872 S12: -1.0638 S13: 1.1650 REMARK 3 S21: 0.8712 S22: -0.0347 S23: -0.6873 REMARK 3 S31: -0.2775 S32: 0.1116 S33: 0.4140 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.9202 2.1637 35.4626 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.5518 REMARK 3 T33: 0.3957 T12: 0.0516 REMARK 3 T13: -0.0564 T23: -0.0477 REMARK 3 L TENSOR REMARK 3 L11: 9.3517 L22: 3.2247 REMARK 3 L33: 4.7522 L12: -0.2285 REMARK 3 L13: -0.0880 L23: -0.4506 REMARK 3 S TENSOR REMARK 3 S11: -0.2994 S12: -0.9023 S13: 0.1108 REMARK 3 S21: 0.2798 S22: 0.1606 S23: -0.4275 REMARK 3 S31: 0.1089 S32: 0.7612 S33: 0.0862 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.7439 7.9584 34.1438 REMARK 3 T TENSOR REMARK 3 T11: 0.1483 T22: 0.2781 REMARK 3 T33: 0.1919 T12: -0.0061 REMARK 3 T13: 0.0229 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 4.7868 L22: 4.4989 REMARK 3 L33: 2.9311 L12: -0.1394 REMARK 3 L13: -0.9844 L23: 0.2379 REMARK 3 S TENSOR REMARK 3 S11: -0.0948 S12: 0.0810 S13: 0.1960 REMARK 3 S21: 0.2351 S22: 0.0662 S23: 0.1322 REMARK 3 S31: -0.0690 S32: -0.2839 S33: 0.0162 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5682 4.3934 24.8661 REMARK 3 T TENSOR REMARK 3 T11: 0.1700 T22: 0.5047 REMARK 3 T33: 0.2960 T12: -0.0304 REMARK 3 T13: 0.0181 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 4.3314 L22: 3.4337 REMARK 3 L33: 2.4737 L12: 0.4463 REMARK 3 L13: -0.6577 L23: -0.9933 REMARK 3 S TENSOR REMARK 3 S11: -0.0947 S12: 0.7511 S13: -0.0761 REMARK 3 S21: -0.1839 S22: 0.0469 S23: -0.1358 REMARK 3 S31: -0.0257 S32: 0.1160 S33: 0.0108 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2019 -8.5828 26.1784 REMARK 3 T TENSOR REMARK 3 T11: 0.3073 T22: 0.5865 REMARK 3 T33: 0.9846 T12: 0.0722 REMARK 3 T13: 0.0576 T23: -0.1972 REMARK 3 L TENSOR REMARK 3 L11: 8.7699 L22: 0.3637 REMARK 3 L33: 4.0257 L12: 1.0217 REMARK 3 L13: -2.4210 L23: 0.6238 REMARK 3 S TENSOR REMARK 3 S11: 0.2011 S12: 0.9277 S13: -1.2014 REMARK 3 S21: -0.2035 S22: 0.0192 S23: -0.3825 REMARK 3 S31: 0.5996 S32: 0.5907 S33: -0.0239 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GIA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1000272803. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27691 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 68.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.18400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 1.33400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 6YWL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-HCL, PH 8, 200 MM SODIUM REMARK 280 ACETATE, 30% PEG4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 70.25850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 18.33400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 70.25850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 18.33400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 1 REMARK 465 GLU C 2 REMARK 465 GLY A 1 REMARK 465 GLU A 2 REMARK 465 GLU A 170 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN C 59 -9.43 70.90 REMARK 500 HIS C 86 -134.90 57.23 REMARK 500 ASN A 4 54.57 -98.86 REMARK 500 HIS A 86 -134.79 56.52 REMARK 500 SER A 128 -1.59 64.25 REMARK 500 PHE A 168 -72.37 -83.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 8GIA C 2 170 UNP P0DTD1 R1AB_SARS2 1024 1192 DBREF 8GIA A 2 170 UNP P0DTD1 R1AB_SARS2 1024 1192 SEQADV 8GIA GLY C 1 UNP P0DTD1 EXPRESSION TAG SEQADV 8GIA GLY A 1 UNP P0DTD1 EXPRESSION TAG SEQRES 1 C 170 GLY GLU VAL ASN SER PHE SER GLY TYR LEU LYS LEU THR SEQRES 2 C 170 ASP ASN VAL TYR ILE LYS ASN ALA ASP ILE VAL GLU GLU SEQRES 3 C 170 ALA LYS LYS VAL LYS PRO THR VAL VAL VAL ASN ALA ALA SEQRES 4 C 170 ASN VAL TYR LEU LYS HIS GLY GLY GLY VAL ALA GLY ALA SEQRES 5 C 170 LEU ASN LYS ALA THR ASN ASN ALA MET GLN VAL GLU SER SEQRES 6 C 170 ASP ASP TYR ILE ALA THR ASN GLY PRO LEU LYS VAL GLY SEQRES 7 C 170 GLY SER CYS VAL LEU SER GLY HIS ASN LEU ALA LYS HIS SEQRES 8 C 170 CYS LEU HIS VAL VAL GLY PRO ASN VAL ASN LYS GLY GLU SEQRES 9 C 170 ASP ILE GLN LEU LEU LYS SER ALA TYR GLU ASN PHE ASN SEQRES 10 C 170 GLN HIS GLU VAL LEU LEU ALA PRO LEU LEU SER ALA GLY SEQRES 11 C 170 ILE PHE GLY ALA ASP PRO ILE HIS SER LEU ARG VAL CYS SEQRES 12 C 170 VAL ASP THR VAL ARG THR ASN VAL TYR LEU ALA VAL PHE SEQRES 13 C 170 ASP LYS ASN LEU TYR ASP LYS LEU VAL SER SER PHE LEU SEQRES 14 C 170 GLU SEQRES 1 A 170 GLY GLU VAL ASN SER PHE SER GLY TYR LEU LYS LEU THR SEQRES 2 A 170 ASP ASN VAL TYR ILE LYS ASN ALA ASP ILE VAL GLU GLU SEQRES 3 A 170 ALA LYS LYS VAL LYS PRO THR VAL VAL VAL ASN ALA ALA SEQRES 4 A 170 ASN VAL TYR LEU LYS HIS GLY GLY GLY VAL ALA GLY ALA SEQRES 5 A 170 LEU ASN LYS ALA THR ASN ASN ALA MET GLN VAL GLU SER SEQRES 6 A 170 ASP ASP TYR ILE ALA THR ASN GLY PRO LEU LYS VAL GLY SEQRES 7 A 170 GLY SER CYS VAL LEU SER GLY HIS ASN LEU ALA LYS HIS SEQRES 8 A 170 CYS LEU HIS VAL VAL GLY PRO ASN VAL ASN LYS GLY GLU SEQRES 9 A 170 ASP ILE GLN LEU LEU LYS SER ALA TYR GLU ASN PHE ASN SEQRES 10 A 170 GLN HIS GLU VAL LEU LEU ALA PRO LEU LEU SER ALA GLY SEQRES 11 A 170 ILE PHE GLY ALA ASP PRO ILE HIS SER LEU ARG VAL CYS SEQRES 12 A 170 VAL ASP THR VAL ARG THR ASN VAL TYR LEU ALA VAL PHE SEQRES 13 A 170 ASP LYS ASN LEU TYR ASP LYS LEU VAL SER SER PHE LEU SEQRES 14 A 170 GLU HET ZJ3 C 201 75 HET ZJ3 A 201 75 HETNAM ZJ3 [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4- HETNAM 2 ZJ3 DIHYDROXYOXOLAN-2-YL]METHYL [(2R,3S,4R,5R)-3,4- HETNAM 3 ZJ3 DIHYDROXY-5-{[2-OXO-4-(TRIFLUOROMETHYL)-2H-1- HETNAM 4 ZJ3 BENZOPYRAN-7-YL]OXY}OXOLAN-2-YL]METHYL DIHYDROGEN HETNAM 5 ZJ3 DIPHOSPHATE FORMUL 3 ZJ3 2(C25 H26 F3 N5 O16 P2) FORMUL 5 HOH *176(H2 O) HELIX 1 AA1 ASP C 22 LYS C 31 1 10 HELIX 2 AA2 GLY C 47 THR C 57 1 11 HELIX 3 AA3 ASN C 59 GLY C 73 1 15 HELIX 4 AA4 ASN C 99 GLY C 103 5 5 HELIX 5 AA5 GLN C 107 ASN C 115 1 9 HELIX 6 AA6 PHE C 116 HIS C 119 5 4 HELIX 7 AA7 ASP C 135 VAL C 147 1 13 HELIX 8 AA8 ASP C 157 LEU C 169 1 13 HELIX 9 AA9 ASP A 22 LYS A 31 1 10 HELIX 10 AB1 GLY A 47 THR A 57 1 11 HELIX 11 AB2 ASN A 59 GLY A 73 1 15 HELIX 12 AB3 GLN A 107 ASN A 115 1 9 HELIX 13 AB4 PHE A 116 HIS A 119 5 4 HELIX 14 AB5 ASP A 135 VAL A 147 1 13 HELIX 15 AB6 ASP A 157 LEU A 169 1 13 SHEET 1 AA1 4 LEU C 10 LYS C 11 0 SHEET 2 AA1 4 VAL C 16 LYS C 19 -1 O ILE C 18 N LEU C 10 SHEET 3 AA1 4 ASN C 150 ALA C 154 1 O LEU C 153 N TYR C 17 SHEET 4 AA1 4 VAL C 121 ALA C 124 1 N LEU C 122 O TYR C 152 SHEET 1 AA2 3 VAL C 34 ALA C 39 0 SHEET 2 AA2 3 HIS C 91 VAL C 96 1 O VAL C 95 N ALA C 39 SHEET 3 AA2 3 SER C 80 SER C 84 -1 N LEU C 83 O CYS C 92 SHEET 1 AA3 4 LEU A 10 LYS A 11 0 SHEET 2 AA3 4 VAL A 16 LYS A 19 -1 O ILE A 18 N LEU A 10 SHEET 3 AA3 4 ASN A 150 ALA A 154 1 O LEU A 153 N TYR A 17 SHEET 4 AA3 4 VAL A 121 ALA A 124 1 N LEU A 122 O TYR A 152 SHEET 1 AA4 3 VAL A 34 ALA A 39 0 SHEET 2 AA4 3 HIS A 91 VAL A 96 1 O VAL A 95 N ALA A 39 SHEET 3 AA4 3 SER A 80 SER A 84 -1 N LEU A 83 O CYS A 92 CRYST1 140.517 36.668 65.056 90.00 101.21 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007117 0.000000 0.001410 0.00000 SCALE2 0.000000 0.027272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015670 0.00000