HEADER ANTIVIRAL PROTEIN 27-AUG-22 8GPX TITLE YFV_E_YD73FAB_POSTFUSION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE PROTEIN; COMPND 3 CHAIN: E; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: YD73FAB_H; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: YD73FAB_K; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YELLOW FEVER VIRUS; SOURCE 3 ORGANISM_TAXID: 11089; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS YELLOW FEVER VIRUS, NEUTRALIZING ANTIBODY, ANTIVIRAL PROTEIN, HUMAN KEYWDS 2 ANTIBODY EXPDTA X-RAY DIFFRACTION AUTHOR Y.LI,L.WU,Y.CHAI,J.QI,J.YAN,G.F.GAO REVDAT 2 29-NOV-23 8GPX 1 REMARK REVDAT 1 02-NOV-22 8GPX 0 JRNL AUTH Y.LI,Z.CHEN,L.WU,L.DAI,J.QI,Y.CHAI,S.LI,Q.WANG,Z.TONG,S.MA, JRNL AUTH 2 X.DUAN,S.REN,R.SONG,M.LIANG,W.LIU,J.YAN,G.F.GAO JRNL TITL A NEUTRALIZING-PROTECTIVE SUPERSITE OF HUMAN MONOCLONAL JRNL TITL 2 ANTIBODIES FOR YELLOW FEVER VIRUS. JRNL REF INNOVATION (N Y) V. 3 00323 2022 JRNL REFN ESSN 2666-6758 JRNL PMID 36199277 JRNL DOI 10.1016/J.XINN.2022.100323 REMARK 2 REMARK 2 RESOLUTION. 3.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.93 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 10988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.264 REMARK 3 R VALUE (WORKING SET) : 0.261 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9300 - 6.0300 0.99 2770 152 0.2572 0.2721 REMARK 3 2 6.0200 - 4.7900 0.99 2654 138 0.2595 0.3290 REMARK 3 3 4.7900 - 4.1800 0.99 2646 123 0.2493 0.2885 REMARK 3 4 4.1800 - 3.8000 0.91 2358 147 0.2859 0.3457 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.272 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.55 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6318 REMARK 3 ANGLE : 0.540 8589 REMARK 3 CHIRALITY : 0.044 968 REMARK 3 PLANARITY : 0.004 1101 REMARK 3 DIHEDRAL : 13.433 2263 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 3 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.9695 -34.0565 72.6317 REMARK 3 T TENSOR REMARK 3 T11: 0.4306 T22: 0.4942 REMARK 3 T33: 0.4250 T12: -0.0002 REMARK 3 T13: 0.1001 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.5861 L22: 0.6321 REMARK 3 L33: 0.4481 L12: 0.1287 REMARK 3 L13: 0.3572 L23: 0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.0208 S12: -0.1772 S13: -0.0629 REMARK 3 S21: 0.2022 S22: -0.1172 S23: 0.0722 REMARK 3 S31: -0.1385 S32: -0.1975 S33: 0.1492 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 244 THROUGH 394 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.9785 -50.5672 92.1576 REMARK 3 T TENSOR REMARK 3 T11: 0.9354 T22: 0.8020 REMARK 3 T33: 0.6121 T12: -0.1598 REMARK 3 T13: 0.1996 T23: 0.1786 REMARK 3 L TENSOR REMARK 3 L11: 0.2014 L22: 0.1697 REMARK 3 L33: 0.7183 L12: -0.1067 REMARK 3 L13: -0.0255 L23: -0.0681 REMARK 3 S TENSOR REMARK 3 S11: 0.1585 S12: -0.2049 S13: -0.2967 REMARK 3 S21: 0.3361 S22: -0.0341 S23: 0.3319 REMARK 3 S31: 0.1512 S32: -0.2960 S33: -0.0851 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7026 -37.4390 23.9744 REMARK 3 T TENSOR REMARK 3 T11: 0.4459 T22: 0.3833 REMARK 3 T33: 0.4424 T12: 0.1774 REMARK 3 T13: -0.1007 T23: -0.2011 REMARK 3 L TENSOR REMARK 3 L11: 0.8990 L22: 1.2176 REMARK 3 L33: 1.8583 L12: -0.0608 REMARK 3 L13: -0.0640 L23: -0.4018 REMARK 3 S TENSOR REMARK 3 S11: 0.0852 S12: 0.0006 S13: 0.0930 REMARK 3 S21: -0.3869 S22: -0.6422 S23: 0.2101 REMARK 3 S31: -0.0244 S32: -0.0386 S33: 0.4311 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 119 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3217 -15.4678 10.8948 REMARK 3 T TENSOR REMARK 3 T11: 0.1925 T22: 0.5544 REMARK 3 T33: 0.1749 T12: 0.0968 REMARK 3 T13: 0.2488 T23: 0.0381 REMARK 3 L TENSOR REMARK 3 L11: 2.3801 L22: 0.8549 REMARK 3 L33: 3.0825 L12: 1.0413 REMARK 3 L13: -0.0423 L23: 0.0410 REMARK 3 S TENSOR REMARK 3 S11: 1.1805 S12: 0.4130 S13: 0.3010 REMARK 3 S21: 0.0739 S22: 0.6491 S23: -0.2323 REMARK 3 S31: 0.1630 S32: 0.7251 S33: -0.5644 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 2 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7643 -23.6188 43.0914 REMARK 3 T TENSOR REMARK 3 T11: 0.5379 T22: 0.1321 REMARK 3 T33: 0.1823 T12: 0.1137 REMARK 3 T13: 0.2552 T23: -0.2786 REMARK 3 L TENSOR REMARK 3 L11: 0.2080 L22: 0.0769 REMARK 3 L33: 0.0389 L12: -0.1420 REMARK 3 L13: -0.0985 L23: 0.0661 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: -0.0394 S13: -0.2308 REMARK 3 S21: 0.1989 S22: -0.0252 S23: 0.0109 REMARK 3 S31: 0.0054 S32: -0.1265 S33: 0.0290 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 19 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4977 -27.9895 38.9627 REMARK 3 T TENSOR REMARK 3 T11: 0.1543 T22: 0.2594 REMARK 3 T33: 0.5225 T12: -0.0063 REMARK 3 T13: -0.0963 T23: -0.1257 REMARK 3 L TENSOR REMARK 3 L11: 1.4480 L22: 1.0091 REMARK 3 L33: 0.4530 L12: -0.6487 REMARK 3 L13: 0.2900 L23: 0.4253 REMARK 3 S TENSOR REMARK 3 S11: -0.1709 S12: -0.1553 S13: -0.1100 REMARK 3 S21: -0.0562 S22: -0.1099 S23: 0.2977 REMARK 3 S31: -0.0834 S32: -0.2425 S33: 0.1092 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 50 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2271 -23.0936 44.0859 REMARK 3 T TENSOR REMARK 3 T11: 0.4505 T22: 0.0746 REMARK 3 T33: 0.2034 T12: -0.0566 REMARK 3 T13: 0.0466 T23: -0.0881 REMARK 3 L TENSOR REMARK 3 L11: 1.0527 L22: 0.8663 REMARK 3 L33: 1.1661 L12: -0.8694 REMARK 3 L13: 0.2834 L23: 0.2215 REMARK 3 S TENSOR REMARK 3 S11: -0.1190 S12: -0.1128 S13: -0.0128 REMARK 3 S21: 0.2675 S22: -0.1343 S23: 0.0964 REMARK 3 S31: 0.0815 S32: 0.0909 S33: 0.0418 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 77 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5099 -27.0809 37.4023 REMARK 3 T TENSOR REMARK 3 T11: 0.2948 T22: 0.2650 REMARK 3 T33: 0.5044 T12: -0.0384 REMARK 3 T13: -0.0438 T23: -0.1196 REMARK 3 L TENSOR REMARK 3 L11: 0.7108 L22: 1.9182 REMARK 3 L33: 0.3516 L12: -0.7868 REMARK 3 L13: -0.1031 L23: 0.2944 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.0680 S13: 0.1074 REMARK 3 S21: 0.1333 S22: -0.0480 S23: 0.1305 REMARK 3 S31: 0.0513 S32: -0.2405 S33: 0.0086 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 105 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.5757 -13.6704 35.8817 REMARK 3 T TENSOR REMARK 3 T11: 0.3079 T22: 0.3651 REMARK 3 T33: 0.3753 T12: -0.1269 REMARK 3 T13: 0.2143 T23: 0.2136 REMARK 3 L TENSOR REMARK 3 L11: 0.0644 L22: 0.1768 REMARK 3 L33: -0.0004 L12: -0.0890 REMARK 3 L13: -0.0242 L23: 0.0243 REMARK 3 S TENSOR REMARK 3 S11: -0.0869 S12: 0.1330 S13: 0.0633 REMARK 3 S21: 0.0081 S22: 0.2643 S23: -0.2703 REMARK 3 S31: -0.0633 S32: -0.1349 S33: -0.0093 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 118 THROUGH 141 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4926 -19.0305 14.0691 REMARK 3 T TENSOR REMARK 3 T11: 0.3352 T22: 0.4841 REMARK 3 T33: 0.5357 T12: -0.0133 REMARK 3 T13: -0.1317 T23: 0.1475 REMARK 3 L TENSOR REMARK 3 L11: 1.0446 L22: 0.8104 REMARK 3 L33: 2.2639 L12: -0.1962 REMARK 3 L13: 0.3325 L23: 0.0134 REMARK 3 S TENSOR REMARK 3 S11: 0.2666 S12: 0.3171 S13: 0.2242 REMARK 3 S21: -0.3581 S22: 0.2149 S23: 0.1751 REMARK 3 S31: -0.0496 S32: -0.1332 S33: -0.0935 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 142 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.8967 -26.6721 25.8771 REMARK 3 T TENSOR REMARK 3 T11: 0.2888 T22: 0.3189 REMARK 3 T33: 0.6767 T12: 0.0807 REMARK 3 T13: -0.6676 T23: 0.2614 REMARK 3 L TENSOR REMARK 3 L11: 0.0131 L22: 0.4404 REMARK 3 L33: 0.1936 L12: -0.0897 REMARK 3 L13: -0.0723 L23: 0.2981 REMARK 3 S TENSOR REMARK 3 S11: 0.1891 S12: -0.0599 S13: -0.3135 REMARK 3 S21: -0.1032 S22: -0.1563 S23: 0.2362 REMARK 3 S31: 0.3090 S32: -0.0415 S33: -0.0351 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 163 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7096 -21.7263 20.8222 REMARK 3 T TENSOR REMARK 3 T11: 0.4559 T22: 0.3777 REMARK 3 T33: 0.3962 T12: -0.0525 REMARK 3 T13: -0.0507 T23: 0.1697 REMARK 3 L TENSOR REMARK 3 L11: 1.3403 L22: 0.5715 REMARK 3 L33: 1.1378 L12: 0.0942 REMARK 3 L13: 0.2806 L23: 0.3381 REMARK 3 S TENSOR REMARK 3 S11: -0.0477 S12: 0.1368 S13: 0.3097 REMARK 3 S21: -0.3112 S22: 0.0594 S23: 0.1924 REMARK 3 S31: 0.1743 S32: -0.2429 S33: -0.0521 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 200 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9050 -18.4303 25.8040 REMARK 3 T TENSOR REMARK 3 T11: 0.3330 T22: 0.9310 REMARK 3 T33: 0.4650 T12: -0.0557 REMARK 3 T13: -0.0603 T23: 0.2038 REMARK 3 L TENSOR REMARK 3 L11: 0.4537 L22: 0.5844 REMARK 3 L33: 0.1442 L12: -0.0664 REMARK 3 L13: -0.2525 L23: -0.0454 REMARK 3 S TENSOR REMARK 3 S11: 0.0910 S12: -0.0470 S13: -0.1066 REMARK 3 S21: -0.1256 S22: 0.0794 S23: 0.2879 REMARK 3 S31: 0.1462 S32: 0.0133 S33: -0.0577 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GPX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 29-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1300031882. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11224 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.18800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0820 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.86600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5JHL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M IMIDAZOLE MALATE, PH 5.5, AND REMARK 280 33% (V/V) PEG 600, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA E 1 REMARK 465 HIS E 2 REMARK 465 GLN E 142 REMARK 465 LEU E 143 REMARK 465 HIS E 144 REMARK 465 VAL E 145 REMARK 465 GLY E 146 REMARK 465 ALA E 147 REMARK 465 LYS E 148 REMARK 465 GLN E 149 REMARK 465 GLU E 150 REMARK 465 ASN E 151 REMARK 465 TRP E 152 REMARK 465 ASN E 153 REMARK 465 THR E 154 REMARK 465 ASP E 155 REMARK 465 ASP E 339 REMARK 465 LEU E 340 REMARK 465 SER E 395 REMARK 465 ILE E 396 REMARK 465 GLY E 397 REMARK 465 LYS E 398 REMARK 465 SER H 141 REMARK 465 LYS H 142 REMARK 465 SER H 143 REMARK 465 THR H 144 REMARK 465 SER H 145 REMARK 465 GLY H 146 REMARK 465 GLU L 1 REMARK 465 CYS L 216 REMARK 465 SER L 217 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU E 268 CD OE1 OE2 REMARK 470 VAL E 344 CG2 REMARK 470 THR E 380 CG2 REMARK 470 VAL H 70 CG1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG E 9 0.89 -68.37 REMARK 500 ASP E 189 70.35 58.86 REMARK 500 PHE E 190 -7.98 -55.34 REMARK 500 THR E 214 52.60 -91.29 REMARK 500 ALA E 240 25.91 -142.74 REMARK 500 ASN E 271 -174.88 -172.30 REMARK 500 SER E 288 -178.84 -69.16 REMARK 500 HIS E 315 32.47 -98.79 REMARK 500 PRO E 329 76.45 -68.81 REMARK 500 ILE E 348 125.85 -37.57 REMARK 500 ASN E 353 68.15 38.56 REMARK 500 PRO E 354 46.32 -82.59 REMARK 500 TYR H 32 67.05 60.92 REMARK 500 MET H 48 -60.15 -93.44 REMARK 500 ARG H 84 -162.60 -79.22 REMARK 500 ASN H 85 127.43 -39.39 REMARK 500 TYR H 105 -16.32 71.86 REMARK 500 ARG H 106 96.62 -162.10 REMARK 500 SER H 107 -66.76 -124.69 REMARK 500 SER H 108 107.92 -163.60 REMARK 500 ASP L 51 -106.20 50.53 REMARK 500 ALA L 85 -169.26 -162.28 REMARK 500 SER L 94 16.84 55.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 8GPX E 1 398 UNP Q89292 Q89292_9FLAV 1 398 DBREF 8GPX H 1 226 PDB 8GPX 8GPX 1 226 DBREF 8GPX L 1 217 PDB 8GPX 8GPX 1 217 SEQRES 1 E 398 ALA HIS CYS ILE GLY ILE THR ASP ARG ASP PHE ILE GLU SEQRES 2 E 398 GLY VAL HIS GLY GLY THR TRP VAL SER ALA THR LEU GLU SEQRES 3 E 398 GLN ASP LYS CYS VAL THR VAL MET ALA PRO ASP LYS PRO SEQRES 4 E 398 SER LEU ASP ILE SER LEU GLN THR VAL ALA ILE ASP GLY SEQRES 5 E 398 PRO ALA GLU ALA ARG LYS VAL CYS TYR SER ALA VAL LEU SEQRES 6 E 398 THR HIS VAL LYS ILE ASN ASP LYS CYS PRO SER THR GLY SEQRES 7 E 398 GLU ALA HIS LEU ALA GLU GLU ASN ASP GLY ASP ASN ALA SEQRES 8 E 398 CYS LYS ARG THR TYR SER ASP ARG GLY TRP GLY ASN GLY SEQRES 9 E 398 CYS GLY LEU PHE GLY LYS GLY SER ILE VAL ALA CYS ALA SEQRES 10 E 398 LYS PHE THR CYS ALA LYS SER MET SER LEU PHE GLU VAL SEQRES 11 E 398 ASP GLN THR LYS ILE GLN TYR VAL ILE ARG ALA GLN LEU SEQRES 12 E 398 HIS VAL GLY ALA LYS GLN GLU ASN TRP ASN THR ASP ILE SEQRES 13 E 398 LYS THR LEU LYS PHE ASP ALA LEU SER GLY SER GLN GLU SEQRES 14 E 398 ALA GLU PHE THR GLY TYR GLY LYS ALA THR LEU GLU CYS SEQRES 15 E 398 GLN VAL GLN THR ALA VAL ASP PHE GLY ASN SER TYR ILE SEQRES 16 E 398 ALA GLU MET GLU LYS ASP SER TRP ILE VAL ASP ARG GLN SEQRES 17 E 398 TRP ALA GLN ASP LEU THR LEU PRO TRP GLN SER GLY SER SEQRES 18 E 398 GLY GLY ILE TRP ARG GLU MET HIS HIS LEU VAL GLU PHE SEQRES 19 E 398 GLU PRO PRO HIS ALA ALA THR ILE ARG VAL LEU ALA LEU SEQRES 20 E 398 GLY ASN GLN GLU GLY SER LEU LYS THR ALA LEU THR GLY SEQRES 21 E 398 ALA MET ARG VAL THR LYS ASP GLU ASN ASP ASN ASN LEU SEQRES 22 E 398 TYR LYS LEU HIS GLY GLY HIS VAL SER CYS ARG VAL LYS SEQRES 23 E 398 LEU SER ALA LEU THR LEU LYS GLY THR SER TYR LYS MET SEQRES 24 E 398 CYS THR ASP LYS MET SER PHE VAL LYS ASN PRO THR ASP SEQRES 25 E 398 THR GLY HIS GLY THR VAL VAL MET GLN VAL LYS VAL PRO SEQRES 26 E 398 LYS GLY ALA PRO CYS LYS ILE PRO VAL ILE VAL ALA ASP SEQRES 27 E 398 ASP LEU THR ALA ALA VAL ASN LYS GLY ILE LEU VAL THR SEQRES 28 E 398 VAL ASN PRO ILE ALA SER THR ASN ASP ASP GLU VAL LEU SEQRES 29 E 398 ILE GLU VAL ASN PRO PRO PHE GLY ASP SER TYR ILE ILE SEQRES 30 E 398 VAL GLY THR GLY ASP SER ARG LEU THR TYR GLN TRP HIS SEQRES 31 E 398 LYS GLU GLY SER SER ILE GLY LYS SEQRES 1 H 226 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 226 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 226 TYR THR PHE ILE ALA TYR GLY ILE SER TRP VAL ARG GLN SEQRES 4 H 226 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE SER SEQRES 5 H 226 ALA HIS ASN GLY ASN THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 226 GLY ARG VAL THR VAL THR THR ASP THR THR THR ARG THR SEQRES 7 H 226 ALA PHE MET GLU LEU ARG ASN LEU ARG SER ASP ASP THR SEQRES 8 H 226 ALA VAL TYR TYR CYS ALA ARG ALA PRO TRP GLU TYR ASN SEQRES 9 H 226 TYR ARG SER SER GLY TYR TYR ASP SER PRO TYR TRP GLY SEQRES 10 H 226 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 11 H 226 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 12 H 226 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 13 H 226 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 14 H 226 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 15 H 226 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 16 H 226 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 17 H 226 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 18 H 226 LYS ARG VAL GLU PRO SEQRES 1 L 217 GLU ILE VAL LEU THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 217 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 217 GLN SER VAL VAL SER THR TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 217 LYS PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR ASP THR SEQRES 5 L 217 SER THR ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 217 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 L 217 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN HIS SEQRES 8 L 217 TYR ASP SER SER PRO PRO TRP THR PHE GLY GLN GLY THR SEQRES 9 L 217 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 L 217 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 L 217 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 L 217 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 L 217 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 L 217 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 L 217 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 L 217 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 L 217 LYS SER PHE ASN ARG GLY GLU CYS SER HELIX 1 AA1 ASP E 131 LYS E 134 5 4 HELIX 2 AA2 ASP E 206 ASP E 212 1 7 HELIX 3 AA3 GLU E 227 HIS E 230 5 4 HELIX 4 AA4 GLN E 250 LEU E 258 1 9 HELIX 5 AA5 PRO H 198 LEU H 202 5 5 HELIX 6 AA6 GLU L 80 PHE L 84 5 5 HELIX 7 AA7 GLU L 125 SER L 129 5 5 HELIX 8 AA8 LYS L 185 LYS L 190 1 6 SHEET 1 AA1 5 PHE E 11 GLU E 13 0 SHEET 2 AA1 5 GLY E 18 THR E 24 -1 O TRP E 20 N ILE E 12 SHEET 3 AA1 5 HIS E 280 SER E 288 -1 O CYS E 283 N ALA E 23 SHEET 4 AA1 5 GLY E 176 GLN E 185 -1 N GLN E 183 O SER E 282 SHEET 5 AA1 5 SER E 167 PHE E 172 -1 N ALA E 170 O ALA E 178 SHEET 1 AA2 4 THR E 158 ASP E 162 0 SHEET 2 AA2 4 GLN E 136 ARG E 140 -1 N ILE E 139 O LEU E 159 SHEET 3 AA2 4 SER E 44 ASP E 51 -1 N SER E 44 O ARG E 140 SHEET 4 AA2 4 TYR E 274 LEU E 276 -1 O LYS E 275 N ILE E 50 SHEET 1 AA3 3 ASN E 90 ARG E 99 0 SHEET 2 AA3 3 GLY E 109 GLU E 129 -1 O GLY E 111 N SER E 97 SHEET 3 AA3 3 ILE E 195 GLU E 197 -1 O ILE E 195 N PHE E 128 SHEET 1 AA4 5 ASN E 90 ARG E 99 0 SHEET 2 AA4 5 GLY E 109 GLU E 129 -1 O GLY E 111 N SER E 97 SHEET 3 AA4 5 ALA E 54 ASP E 72 -1 N THR E 66 O LYS E 118 SHEET 4 AA4 5 TRP E 217 GLN E 218 -1 O GLN E 218 N LYS E 58 SHEET 5 AA4 5 TRP E 225 ARG E 226 -1 O ARG E 226 N TRP E 217 SHEET 1 AA5 2 VAL E 232 PHE E 234 0 SHEET 2 AA5 2 VAL E 244 ALA E 246 -1 O LEU E 245 N GLU E 233 SHEET 1 AA6 2 LYS E 298 MET E 299 0 SHEET 2 AA6 2 CYS E 330 LYS E 331 1 O LYS E 331 N LYS E 298 SHEET 1 AA7 3 SER E 305 ASP E 312 0 SHEET 2 AA7 3 VAL E 318 LYS E 323 -1 O VAL E 319 N THR E 311 SHEET 3 AA7 3 GLU E 362 VAL E 367 -1 O VAL E 367 N VAL E 318 SHEET 1 AA8 3 VAL E 334 ALA E 337 0 SHEET 2 AA8 3 GLY E 372 VAL E 378 -1 O ILE E 377 N ILE E 335 SHEET 3 AA8 3 LEU E 385 LYS E 391 -1 O LEU E 385 N VAL E 378 SHEET 1 AA9 4 GLN H 3 GLN H 6 0 SHEET 2 AA9 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA9 4 THR H 78 LEU H 83 -1 O LEU H 83 N VAL H 18 SHEET 4 AA9 4 THR H 72 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AB1 6 GLU H 10 LYS H 12 0 SHEET 2 AB1 6 LEU H 121 VAL H 124 1 O THR H 123 N GLU H 10 SHEET 3 AB1 6 ALA H 92 ARG H 98 -1 N ALA H 92 O VAL H 122 SHEET 4 AB1 6 ILE H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AB1 6 LEU H 45 TRP H 50 -1 O GLY H 49 N TRP H 36 SHEET 6 AB1 6 ASN H 59 TYR H 60 -1 O ASN H 59 N TRP H 50 SHEET 1 AB2 4 SER H 133 LEU H 137 0 SHEET 2 AB2 4 ALA H 149 TYR H 158 -1 O LEU H 154 N PHE H 135 SHEET 3 AB2 4 TYR H 189 VAL H 197 -1 O VAL H 195 N LEU H 151 SHEET 4 AB2 4 VAL H 176 THR H 178 -1 N HIS H 177 O VAL H 194 SHEET 1 AB3 4 SER H 133 LEU H 137 0 SHEET 2 AB3 4 ALA H 149 TYR H 158 -1 O LEU H 154 N PHE H 135 SHEET 3 AB3 4 TYR H 189 VAL H 197 -1 O VAL H 195 N LEU H 151 SHEET 4 AB3 4 VAL H 182 LEU H 183 -1 N VAL H 182 O SER H 190 SHEET 1 AB4 3 THR H 164 TRP H 167 0 SHEET 2 AB4 3 ILE H 208 HIS H 213 -1 O ASN H 210 N SER H 166 SHEET 3 AB4 3 THR H 218 ARG H 223 -1 O VAL H 220 N VAL H 211 SHEET 1 AB5 4 THR L 5 SER L 7 0 SHEET 2 AB5 4 ALA L 19 ARG L 24 -1 O ARG L 24 N THR L 5 SHEET 3 AB5 4 ASP L 71 ILE L 76 -1 O ILE L 76 N ALA L 19 SHEET 4 AB5 4 PHE L 63 SER L 68 -1 N SER L 64 O THR L 75 SHEET 1 AB6 2 THR L 10 SER L 12 0 SHEET 2 AB6 2 LYS L 105 GLU L 107 1 O LYS L 105 N LEU L 11 SHEET 1 AB7 5 THR L 54 ARG L 55 0 SHEET 2 AB7 5 ARG L 46 TYR L 50 -1 N TYR L 50 O THR L 54 SHEET 3 AB7 5 TYR L 33 GLN L 39 -1 N GLN L 38 O ARG L 46 SHEET 4 AB7 5 VAL L 86 TYR L 92 -1 O VAL L 86 N GLN L 39 SHEET 5 AB7 5 THR L 99 PHE L 100 -1 O THR L 99 N HIS L 91 SHEET 1 AB8 4 SER L 116 PHE L 120 0 SHEET 2 AB8 4 THR L 131 PHE L 141 -1 O VAL L 135 N PHE L 120 SHEET 3 AB8 4 TYR L 175 SER L 184 -1 O LEU L 177 N LEU L 138 SHEET 4 AB8 4 SER L 161 GLN L 162 -1 N GLN L 162 O THR L 180 SHEET 1 AB9 4 LEU L 156 GLN L 157 0 SHEET 2 AB9 4 LYS L 147 VAL L 152 -1 N TRP L 150 O GLN L 157 SHEET 3 AB9 4 VAL L 193 THR L 199 -1 O GLU L 197 N GLN L 149 SHEET 4 AB9 4 VAL L 207 ASN L 212 -1 O PHE L 211 N TYR L 194 SSBOND 1 CYS E 3 CYS E 30 1555 1555 2.03 SSBOND 2 CYS E 60 CYS E 121 1555 1555 2.03 SSBOND 3 CYS E 74 CYS E 105 1555 1555 2.03 SSBOND 4 CYS E 92 CYS E 116 1555 1555 2.03 SSBOND 5 CYS E 182 CYS E 283 1555 1555 2.03 SSBOND 6 CYS E 300 CYS E 330 1555 1555 2.03 SSBOND 7 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 8 CYS H 153 CYS H 209 1555 1555 2.03 SSBOND 9 CYS L 23 CYS L 89 1555 1555 2.03 SSBOND 10 CYS L 136 CYS L 196 1555 1555 2.04 CISPEP 1 PHE H 159 PRO H 160 0 -4.38 CISPEP 2 GLU H 161 PRO H 162 0 2.63 CISPEP 3 SER L 7 PRO L 8 0 -3.50 CISPEP 4 TYR L 142 PRO L 143 0 3.07 CRYST1 102.874 102.874 178.663 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009721 0.005612 0.000000 0.00000 SCALE2 0.000000 0.011224 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005597 0.00000