HEADER VIRAL PROTEIN 27-AUG-22 8GPY TITLE CRYSTAL STRUCTURE OF OMICRON BA.4/5 RBD IN COMPLEX WITH A NEUTRALIZING TITLE 2 ANTIBODY SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SCFV; COMPND 7 CHAIN: C, E; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: S, 2; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7110; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 EXPRESSION_SYSTEM: TRICHOPLUSIA; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 7110 KEYWDS OMICRON, CRYSTAL STRCTURE, NEUTRALIZING ANTIBODY, SCFV, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.X.GAO,Z.D.SONG,W.M.WANG,Y.GUO REVDAT 3 13-MAR-24 8GPY 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQRES HELIX SHEET SSBOND REVDAT 3 3 1 ATOM REVDAT 2 29-NOV-23 8GPY 1 REMARK REVDAT 1 28-JUN-23 8GPY 0 JRNL AUTH Y.GUO,G.ZHANG,Q.YANG,X.XIE,Y.LU,X.CHENG,H.WANG,J.LIANG, JRNL AUTH 2 J.TANG,Y.GAO,H.SHANG,J.DAI,Y.SHI,J.ZHOU,J.ZHOU,H.GUO,H.YANG, JRNL AUTH 3 J.QI,L.LIU,S.MA,B.ZHANG,Q.HUO,Y.XIE,J.WU,F.DONG,S.ZHANG, JRNL AUTH 4 Z.LOU,Y.GAO,Z.SONG,W.WANG,Z.SUN,X.YANG,D.XIONG,F.LIU,X.CHEN, JRNL AUTH 5 P.ZHU,X.WANG,T.CHENG,Z.RAO JRNL TITL DISCOVERY AND CHARACTERIZATION OF POTENT PAN-VARIANT JRNL TITL 2 SARS-COV-2 NEUTRALIZING ANTIBODIES FROM INDIVIDUALS WITH JRNL TITL 3 OMICRON BREAKTHROUGH INFECTION. JRNL REF NAT COMMUN V. 14 3537 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37322000 JRNL DOI 10.1038/S41467-023-39267-X REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 71.9 REMARK 3 NUMBER OF REFLECTIONS : 48308 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.690 REMARK 3 FREE R VALUE TEST SET COUNT : 3230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6000 - 7.1200 0.98 2679 194 0.1866 0.2191 REMARK 3 2 7.1200 - 5.6500 1.00 2715 200 0.1936 0.2161 REMARK 3 3 5.6500 - 4.9400 0.99 2703 199 0.1739 0.2419 REMARK 3 4 4.9400 - 4.4900 0.99 2692 192 0.1620 0.1807 REMARK 3 5 4.4900 - 4.1700 0.99 2710 187 0.1671 0.1999 REMARK 3 6 4.1700 - 3.9200 0.99 2712 197 0.1902 0.2059 REMARK 3 7 3.9200 - 3.7200 0.98 2663 190 0.2005 0.2632 REMARK 3 8 3.7200 - 3.5600 0.98 2679 183 0.2195 0.2739 REMARK 3 9 3.5600 - 3.4300 0.98 2665 185 0.2258 0.2890 REMARK 3 10 3.4200 - 3.3100 0.94 2549 186 0.2427 0.2906 REMARK 3 11 3.3100 - 3.2000 0.90 2446 172 0.2635 0.2477 REMARK 3 12 3.2000 - 3.1100 0.85 2391 158 0.2439 0.3494 REMARK 3 13 3.1100 - 3.0300 0.78 2131 162 0.2789 0.2754 REMARK 3 14 3.0300 - 2.9600 0.74 1952 140 0.2791 0.3324 REMARK 3 15 2.9600 - 2.8900 0.65 1818 126 0.2965 0.3099 REMARK 3 16 2.8900 - 2.8300 0.60 1603 127 0.3011 0.3398 REMARK 3 17 2.8300 - 2.7700 0.54 1466 113 0.3024 0.2675 REMARK 3 18 2.7700 - 2.7200 0.49 1357 81 0.3000 0.3407 REMARK 3 19 2.7200 - 2.6700 0.40 1091 84 0.3023 0.3083 REMARK 3 20 2.6700 - 2.6200 0.29 765 67 0.3220 0.2767 REMARK 3 21 2.6200 - 2.5800 0.22 616 44 0.3531 0.3493 REMARK 3 22 2.5800 - 2.5400 0.15 419 26 0.4146 0.4941 REMARK 3 23 2.5400 - 2.5100 0.09 256 17 0.4697 0.6206 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300031884. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48308 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 2.06000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4NIK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM FORMATE, PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.43150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.04600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.43150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 46.04600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 333 REMARK 465 ASN A 334 REMARK 465 LEU A 335 REMARK 465 PRO A 527 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 SER A 530 REMARK 465 ALA A 531 REMARK 465 ALA A 532 REMARK 465 ALA A 533 REMARK 465 THR B 333 REMARK 465 GLY B 476 REMARK 465 ASN B 481 REMARK 465 GLY B 482 REMARK 465 VAL B 483 REMARK 465 ALA B 484 REMARK 465 GLY B 485 REMARK 465 VAL B 486 REMARK 465 LEU B 517 REMARK 465 LEU B 518 REMARK 465 HIS B 519 REMARK 465 ALA B 520 REMARK 465 PRO B 521 REMARK 465 ALA B 522 REMARK 465 PRO B 527 REMARK 465 LYS B 528 REMARK 465 LYS B 529 REMARK 465 SER B 530 REMARK 465 ALA B 531 REMARK 465 ALA B 532 REMARK 465 ALA B 533 REMARK 465 GLN C 121 REMARK 465 SER C 122 REMARK 465 ALA C 230 REMARK 465 ALA C 231 REMARK 465 ALA C 232 REMARK 465 SER E 120 REMARK 465 ALA E 232 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU C 1 CG CD OE1 OE2 REMARK 480 LEU C 11 CG CD1 CD2 REMARK 480 GLU C 89 CG CD OE1 OE2 REMARK 480 ARG C 112 NE CZ NH1 NH2 REMARK 480 SER C 131 OG REMARK 480 GLN C 136 CG CD OE1 NE2 REMARK 480 LYS C 164 CE NZ REMARK 480 GLU C 203 CD OE1 OE2 REMARK 480 LYS C 225 CE NZ REMARK 480 GLU E 1 CG CD OE1 OE2 REMARK 480 LEU E 11 CG CD1 CD2 REMARK 480 GLU E 89 CG CD OE1 OE2 REMARK 480 ARG E 112 NE CZ NH1 NH2 REMARK 480 SER E 131 OG REMARK 480 GLN E 136 CG CD OE1 NE2 REMARK 480 LYS E 164 CE NZ REMARK 480 LYS E 225 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 370 40.21 -105.99 REMARK 500 PHE A 371 -154.84 -119.12 REMARK 500 TYR B 369 -87.58 -128.45 REMARK 500 ALA B 372 -175.25 62.26 REMARK 500 PHE B 374 70.64 63.56 REMARK 500 GLU C 43 -161.58 -113.42 REMARK 500 THR C 102 -79.09 -100.04 REMARK 500 ASP C 148 -86.14 -114.39 REMARK 500 TYR C 154 58.44 -103.70 REMARK 500 VAL C 173 -47.93 71.69 REMARK 500 ALA C 206 -170.69 -170.01 REMARK 500 VAL E 64 -14.50 -141.04 REMARK 500 THR E 102 -75.39 -114.54 REMARK 500 ASP E 148 -86.52 -128.18 REMARK 500 VAL E 173 -45.40 71.76 REMARK 500 PRO E 177 -177.20 -68.92 REMARK 500 ASP E 182 1.23 -69.37 REMARK 500 ALA E 206 -173.58 -177.08 REMARK 500 REMARK 500 REMARK: NULL DBREF 8GPY A 333 530 UNP P0DTC2 SPIKE_SARS2 333 530 DBREF 8GPY B 333 530 UNP P0DTC2 SPIKE_SARS2 333 530 DBREF 8GPY C 1 232 PDB 8GPY 8GPY 1 232 DBREF 8GPY E 1 232 PDB 8GPY 8GPY 1 232 SEQADV 8GPY ASP A 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 8GPY PHE A 371 UNP P0DTC2 SER 371 VARIANT SEQADV 8GPY PRO A 373 UNP P0DTC2 SER 373 VARIANT SEQADV 8GPY PHE A 375 UNP P0DTC2 SER 375 VARIANT SEQADV 8GPY ALA A 376 UNP P0DTC2 THR 376 VARIANT SEQADV 8GPY ASN A 405 UNP P0DTC2 ASP 405 VARIANT SEQADV 8GPY SER A 408 UNP P0DTC2 ARG 408 VARIANT SEQADV 8GPY ASN A 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 8GPY LYS A 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 8GPY ARG A 452 UNP P0DTC2 LEU 452 VARIANT SEQADV 8GPY ASN A 477 UNP P0DTC2 SER 477 VARIANT SEQADV 8GPY LYS A 478 UNP P0DTC2 THR 478 VARIANT SEQADV 8GPY ALA A 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 8GPY VAL A 486 UNP P0DTC2 PHE 486 VARIANT SEQADV 8GPY ARG A 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 8GPY TYR A 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 8GPY HIS A 505 UNP P0DTC2 TYR 505 VARIANT SEQADV 8GPY ALA A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8GPY ALA A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 8GPY ALA A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 8GPY ASP B 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 8GPY PHE B 371 UNP P0DTC2 SER 371 VARIANT SEQADV 8GPY PRO B 373 UNP P0DTC2 SER 373 VARIANT SEQADV 8GPY PHE B 375 UNP P0DTC2 SER 375 VARIANT SEQADV 8GPY ALA B 376 UNP P0DTC2 THR 376 VARIANT SEQADV 8GPY ASN B 405 UNP P0DTC2 ASP 405 VARIANT SEQADV 8GPY SER B 408 UNP P0DTC2 ARG 408 VARIANT SEQADV 8GPY ASN B 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 8GPY LYS B 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 8GPY ARG B 452 UNP P0DTC2 LEU 452 VARIANT SEQADV 8GPY ASN B 477 UNP P0DTC2 SER 477 VARIANT SEQADV 8GPY LYS B 478 UNP P0DTC2 THR 478 VARIANT SEQADV 8GPY ALA B 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 8GPY VAL B 486 UNP P0DTC2 PHE 486 VARIANT SEQADV 8GPY ARG B 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 8GPY TYR B 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 8GPY HIS B 505 UNP P0DTC2 TYR 505 VARIANT SEQADV 8GPY ALA B 531 UNP P0DTC2 EXPRESSION TAG SEQADV 8GPY ALA B 532 UNP P0DTC2 EXPRESSION TAG SEQADV 8GPY ALA B 533 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 201 THR ASN LEU CYS PRO PHE ASP GLU VAL PHE ASN ALA THR SEQRES 2 A 201 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 A 201 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN PHE SEQRES 4 A 201 ALA PRO PHE PHE ALA PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 A 201 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 A 201 ASP SER PHE VAL ILE ARG GLY ASN GLU VAL SER GLN ILE SEQRES 7 A 201 ALA PRO GLY GLN THR GLY ASN ILE ALA ASP TYR ASN TYR SEQRES 8 A 201 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 A 201 ASN SER ASN LYS LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 A 201 ASN TYR ARG TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 A 201 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 A 201 GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY VAL ASN CYS SEQRES 13 A 201 TYR PHE PRO LEU GLN SER TYR GLY PHE ARG PRO THR TYR SEQRES 14 A 201 GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 A 201 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 A 201 LYS LYS SER ALA ALA ALA SEQRES 1 B 201 THR ASN LEU CYS PRO PHE ASP GLU VAL PHE ASN ALA THR SEQRES 2 B 201 ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG ILE SEQRES 3 B 201 SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN PHE SEQRES 4 B 201 ALA PRO PHE PHE ALA PHE LYS CYS TYR GLY VAL SER PRO SEQRES 5 B 201 THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR ALA SEQRES 6 B 201 ASP SER PHE VAL ILE ARG GLY ASN GLU VAL SER GLN ILE SEQRES 7 B 201 ALA PRO GLY GLN THR GLY ASN ILE ALA ASP TYR ASN TYR SEQRES 8 B 201 LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA TRP SEQRES 9 B 201 ASN SER ASN LYS LEU ASP SER LYS VAL GLY GLY ASN TYR SEQRES 10 B 201 ASN TYR ARG TYR ARG LEU PHE ARG LYS SER ASN LEU LYS SEQRES 11 B 201 PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN ALA SEQRES 12 B 201 GLY ASN LYS PRO CYS ASN GLY VAL ALA GLY VAL ASN CYS SEQRES 13 B 201 TYR PHE PRO LEU GLN SER TYR GLY PHE ARG PRO THR TYR SEQRES 14 B 201 GLY VAL GLY HIS GLN PRO TYR ARG VAL VAL VAL LEU SER SEQRES 15 B 201 PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY PRO SEQRES 16 B 201 LYS LYS SER ALA ALA ALA SEQRES 1 C 232 GLU VAL ARG LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 232 PHE THR PHE ASN ASP TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 C 232 ALA PRO GLY GLU GLY LEU GLU TRP VAL SER THR ILE SER SEQRES 5 C 232 TYR SER GLY GLY SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 C 232 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN MET SEQRES 7 C 232 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 C 232 ALA LEU TYR TYR CYS ALA ASN GLY VAL ALA THR ALA ASP SEQRES 9 C 232 TRP TYR PHE ASP LEU TRP GLY ARG GLY THR LEU VAL THR SEQRES 10 C 232 VAL SER SER GLN SER ALA LEU THR GLN PRO ARG SER VAL SEQRES 11 C 232 SER GLY SER PRO GLY GLN SER VAL THR ILE SER CYS THR SEQRES 12 C 232 GLY THR SER SER ASP VAL GLY GLY TYR ASN TYR VAL SER SEQRES 13 C 232 TRP PHE GLN HIS HIS PRO GLY LYS ALA PRO LYS LEU MET SEQRES 14 C 232 ILE TYR ASP VAL THR ASP ARG PRO SER GLY VAL PRO ASP SEQRES 15 C 232 ARG PHE SER GLY SER LYS SER GLY ASN THR ALA SER LEU SEQRES 16 C 232 THR ILE SER GLY LEU GLN ALA GLU ASP ALA ALA ASP TYR SEQRES 17 C 232 TYR CYS CYS SER TYR ALA GLY THR TYR THR VAL PHE GLY SEQRES 18 C 232 GLY GLY THR LYS LEU THR VAL LEU ALA ALA ALA SEQRES 1 E 232 GLU VAL ARG LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 E 232 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 E 232 PHE THR PHE ASN ASP TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 E 232 ALA PRO GLY GLU GLY LEU GLU TRP VAL SER THR ILE SER SEQRES 5 E 232 TYR SER GLY GLY SER THR TYR TYR ALA ASP SER VAL LYS SEQRES 6 E 232 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN MET SEQRES 7 E 232 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 E 232 ALA LEU TYR TYR CYS ALA ASN GLY VAL ALA THR ALA ASP SEQRES 9 E 232 TRP TYR PHE ASP LEU TRP GLY ARG GLY THR LEU VAL THR SEQRES 10 E 232 VAL SER SER GLN SER ALA LEU THR GLN PRO ARG SER VAL SEQRES 11 E 232 SER GLY SER PRO GLY GLN SER VAL THR ILE SER CYS THR SEQRES 12 E 232 GLY THR SER SER ASP VAL GLY GLY TYR ASN TYR VAL SER SEQRES 13 E 232 TRP PHE GLN HIS HIS PRO GLY LYS ALA PRO LYS LEU MET SEQRES 14 E 232 ILE TYR ASP VAL THR ASP ARG PRO SER GLY VAL PRO ASP SEQRES 15 E 232 ARG PHE SER GLY SER LYS SER GLY ASN THR ALA SER LEU SEQRES 16 E 232 THR ILE SER GLY LEU GLN ALA GLU ASP ALA ALA ASP TYR SEQRES 17 E 232 TYR CYS CYS SER TYR ALA GLY THR TYR THR VAL PHE GLY SEQRES 18 E 232 GLY GLY THR LYS LEU THR VAL LEU ALA ALA ALA FORMUL 5 HOH *149(H2 O) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 TYR A 365 ASN A 370 1 6 HELIX 3 AA3 SER A 383 LEU A 387 5 5 HELIX 4 AA4 ASN A 405 ILE A 410 5 6 HELIX 5 AA5 GLY A 416 ASN A 422 1 7 HELIX 6 AA6 SER A 438 SER A 443 1 6 HELIX 7 AA7 PHE B 338 ASN B 343 1 6 HELIX 8 AA8 LYS B 386 ASP B 389 5 4 HELIX 9 AA9 ASN B 405 ILE B 410 5 6 HELIX 10 AB1 GLY B 416 ASN B 422 1 7 HELIX 11 AB2 SER B 438 SER B 443 1 6 HELIX 12 AB3 THR C 28 TYR C 32 5 5 HELIX 13 AB4 ARG C 87 THR C 91 5 5 HELIX 14 AB5 GLN C 201 ALA C 205 5 5 HELIX 15 AB6 THR E 28 TYR E 32 5 5 HELIX 16 AB7 ARG E 87 THR E 91 5 5 HELIX 17 AB8 GLN E 201 ALA E 205 5 5 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 ALA A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AA2 2 CYS A 361 VAL A 362 0 SHEET 2 AA2 2 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 1 AA3 2 ARG A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 5 ASN B 354 ILE B 358 0 SHEET 2 AA5 5 VAL B 395 ARG B 403 -1 O VAL B 395 N ILE B 358 SHEET 3 AA5 5 PRO B 507 PHE B 515 -1 O TYR B 508 N ILE B 402 SHEET 4 AA5 5 GLY B 431 ASN B 437 -1 N ILE B 434 O VAL B 511 SHEET 5 AA5 5 PHE B 375 TYR B 380 -1 N LYS B 378 O VAL B 433 SHEET 1 AA6 3 CYS B 361 VAL B 362 0 SHEET 2 AA6 3 VAL B 524 CYS B 525 1 O CYS B 525 N CYS B 361 SHEET 3 AA6 3 CYS B 391 PHE B 392 -1 N PHE B 392 O VAL B 524 SHEET 1 AA7 2 ARG B 452 ARG B 454 0 SHEET 2 AA7 2 LEU B 492 SER B 494 -1 O GLN B 493 N TYR B 453 SHEET 1 AA8 2 TYR B 473 GLN B 474 0 SHEET 2 AA8 2 CYS B 488 TYR B 489 -1 O TYR B 489 N TYR B 473 SHEET 1 AA9 4 ARG C 3 SER C 7 0 SHEET 2 AA9 4 LEU C 18 SER C 25 -1 O ALA C 23 N LEU C 5 SHEET 3 AA9 4 MET C 78 MET C 83 -1 O LEU C 79 N CYS C 22 SHEET 4 AA9 4 PHE C 68 ASP C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AB1 6 LEU C 11 VAL C 12 0 SHEET 2 AB1 6 THR C 114 VAL C 118 1 O THR C 117 N VAL C 12 SHEET 3 AB1 6 ALA C 92 ASN C 98 -1 N TYR C 94 O THR C 114 SHEET 4 AB1 6 MET C 34 GLN C 39 -1 N VAL C 37 O TYR C 95 SHEET 5 AB1 6 LEU C 45 ILE C 51 -1 O ILE C 51 N MET C 34 SHEET 6 AB1 6 THR C 58 TYR C 60 -1 O TYR C 59 N THR C 50 SHEET 1 AB2 4 LEU C 11 VAL C 12 0 SHEET 2 AB2 4 THR C 114 VAL C 118 1 O THR C 117 N VAL C 12 SHEET 3 AB2 4 ALA C 92 ASN C 98 -1 N TYR C 94 O THR C 114 SHEET 4 AB2 4 LEU C 109 TRP C 110 -1 O LEU C 109 N ASN C 98 SHEET 1 AB3 5 SER C 129 GLY C 132 0 SHEET 2 AB3 5 THR C 224 VAL C 228 1 O THR C 227 N VAL C 130 SHEET 3 AB3 5 ALA C 206 TYR C 213 -1 N ALA C 206 O LEU C 226 SHEET 4 AB3 5 VAL C 155 HIS C 160 -1 N SER C 156 O CYS C 211 SHEET 5 AB3 5 LYS C 167 ILE C 170 -1 O LYS C 167 N GLN C 159 SHEET 1 AB4 4 SER C 129 GLY C 132 0 SHEET 2 AB4 4 THR C 224 VAL C 228 1 O THR C 227 N VAL C 130 SHEET 3 AB4 4 ALA C 206 TYR C 213 -1 N ALA C 206 O LEU C 226 SHEET 4 AB4 4 THR C 218 PHE C 220 -1 O VAL C 219 N SER C 212 SHEET 1 AB5 3 VAL C 138 THR C 143 0 SHEET 2 AB5 3 THR C 192 ILE C 197 -1 O LEU C 195 N ILE C 140 SHEET 3 AB5 3 PHE C 184 SER C 189 -1 N SER C 187 O SER C 194 SHEET 1 AB6 4 ARG E 3 SER E 7 0 SHEET 2 AB6 4 LEU E 18 SER E 25 -1 O ALA E 23 N LEU E 5 SHEET 3 AB6 4 MET E 78 MET E 83 -1 O LEU E 81 N LEU E 20 SHEET 4 AB6 4 PHE E 68 ASP E 73 -1 N SER E 71 O TYR E 80 SHEET 1 AB7 6 LEU E 11 VAL E 12 0 SHEET 2 AB7 6 THR E 114 VAL E 118 1 O THR E 117 N VAL E 12 SHEET 3 AB7 6 ALA E 92 ASN E 98 -1 N TYR E 94 O THR E 114 SHEET 4 AB7 6 MET E 34 GLN E 39 -1 N VAL E 37 O TYR E 95 SHEET 5 AB7 6 LEU E 45 ILE E 51 -1 O ILE E 51 N MET E 34 SHEET 6 AB7 6 THR E 58 TYR E 60 -1 O TYR E 59 N THR E 50 SHEET 1 AB8 4 LEU E 11 VAL E 12 0 SHEET 2 AB8 4 THR E 114 VAL E 118 1 O THR E 117 N VAL E 12 SHEET 3 AB8 4 ALA E 92 ASN E 98 -1 N TYR E 94 O THR E 114 SHEET 4 AB8 4 LEU E 109 TRP E 110 -1 N LEU E 109 O ASN E 98 SHEET 1 AB9 5 SER E 129 GLY E 132 0 SHEET 2 AB9 5 THR E 224 VAL E 228 1 O THR E 227 N VAL E 130 SHEET 3 AB9 5 ALA E 206 TYR E 213 -1 N ALA E 206 O LEU E 226 SHEET 4 AB9 5 VAL E 155 HIS E 160 -1 N HIS E 160 O ASP E 207 SHEET 5 AB9 5 LYS E 167 ILE E 170 -1 O LYS E 167 N GLN E 159 SHEET 1 AC1 4 SER E 129 GLY E 132 0 SHEET 2 AC1 4 THR E 224 VAL E 228 1 O THR E 227 N VAL E 130 SHEET 3 AC1 4 ALA E 206 TYR E 213 -1 N ALA E 206 O LEU E 226 SHEET 4 AC1 4 THR E 218 PHE E 220 -1 O VAL E 219 N SER E 212 SHEET 1 AC2 3 VAL E 138 THR E 143 0 SHEET 2 AC2 3 THR E 192 ILE E 197 -1 O LEU E 195 N ILE E 140 SHEET 3 AC2 3 PHE E 184 SER E 189 -1 N SER E 185 O THR E 196 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 480 CYS A 488 1555 1555 2.02 SSBOND 4 CYS B 336 CYS B 361 1555 1555 2.03 SSBOND 5 CYS B 379 CYS B 432 1555 1555 2.03 SSBOND 6 CYS B 391 CYS B 525 1555 1555 2.03 SSBOND 7 CYS B 480 CYS B 488 1555 1555 2.03 SSBOND 8 CYS C 22 CYS C 96 1555 1555 2.04 SSBOND 9 CYS C 142 CYS C 210 1555 1555 2.02 SSBOND 10 CYS E 22 CYS E 96 1555 1555 2.03 SSBOND 11 CYS E 142 CYS E 210 1555 1555 2.02 CRYST1 122.863 92.092 89.270 90.00 92.40 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008139 0.000000 0.000341 0.00000 SCALE2 0.000000 0.010859 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011212 0.00000