HEADER OXIDOREDUCTASE 02-SEP-22 8GRU TITLE CRYSTAL STRUCTURE OF A CONSTITUTIVELY ACTIVE MUTANT OF THE ALPHA BETA TITLE 2 HETERODIMER OF HUMAN IDH3 IN COMPLEX WITH ICT, NAD AND CA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN IDH3 ALPHA SUBUNIT; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ISOFORM A OF ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT BETA, COMPND 8 MITOCHONDRIAL; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: ISOCITRIC DEHYDROGENASE SUBUNIT BETA,NAD(+)-SPECIFIC ICDH COMPND 11 SUBUNIT BETA; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 GENE: IDH3B; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ISOCITRATE DEHYDROGENASE, NAD-DEPENDENT IDH, ASSEMBLY, ALLOSTERIC KEYWDS 2 REGULATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.SUN,X.CHEN,J.DING REVDAT 3 29-NOV-23 8GRU 1 REMARK REVDAT 2 21-DEC-22 8GRU 1 JRNL REVDAT 1 30-NOV-22 8GRU 0 JRNL AUTH X.CHEN,P.SUN,Y.LIU,S.SHEN,T.MA,J.DING JRNL TITL STRUCTURES OF A CONSTITUTIVELY ACTIVE MUTANT OF HUMAN IDH3 JRNL TITL 2 REVEAL NEW INSIGHTS INTO THE MECHANISMS OF ALLOSTERIC JRNL TITL 3 ACTIVATION AND THE CATALYTIC REACTION. JRNL REF J.BIOL.CHEM. V. 298 02695 2022 JRNL REFN ESSN 1083-351X JRNL PMID 36375638 JRNL DOI 10.1016/J.JBC.2022.102695 REMARK 2 REMARK 2 RESOLUTION. 2.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.96 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 42005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 2166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9580 - 7.0115 0.98 2764 153 0.1904 0.2298 REMARK 3 2 7.0115 - 5.5697 1.00 2714 146 0.2062 0.2583 REMARK 3 3 5.5697 - 4.8669 1.00 2724 134 0.1849 0.2230 REMARK 3 4 4.8669 - 4.4225 1.00 2672 146 0.1610 0.2003 REMARK 3 5 4.4225 - 4.1058 1.00 2679 145 0.1771 0.2399 REMARK 3 6 4.1058 - 3.8639 1.00 2684 148 0.1909 0.2269 REMARK 3 7 3.8639 - 3.6706 1.00 2661 126 0.2050 0.2745 REMARK 3 8 3.6706 - 3.5109 1.00 2663 140 0.2198 0.2619 REMARK 3 9 3.5109 - 3.3758 1.00 2649 165 0.2420 0.3074 REMARK 3 10 3.3758 - 3.2593 1.00 2648 136 0.2485 0.3366 REMARK 3 11 3.2593 - 3.1575 1.00 2643 148 0.2487 0.3311 REMARK 3 12 3.1575 - 3.0672 1.00 2654 147 0.2466 0.3048 REMARK 3 13 3.0672 - 2.9865 1.00 2627 155 0.2626 0.3164 REMARK 3 14 2.9865 - 2.9137 1.00 2626 148 0.2589 0.3255 REMARK 3 15 2.9137 - 2.8475 0.92 2431 129 0.2711 0.3536 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8GRU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1300031958. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : LN2-COOLED DCM WITH SI(111) REMARK 200 CRYSTALS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.847 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.23700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.96300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.14_3260 REMARK 200 STARTING MODEL: 6KDF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE (PH 6.0), 20% REMARK 280 (W/V) PEG 3350, 40 MM ICT, 40 MM NAD AND 5 MM CA2+, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.56450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.56450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 67.02150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 81.91650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 67.02150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 81.91650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 81.56450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 67.02150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 81.91650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 81.56450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 67.02150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 81.91650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 48 REMARK 465 LEU A 338 REMARK 465 ASP A 339 REMARK 465 ALA B 1 REMARK 465 SER B 2 REMARK 465 ARG B 3 REMARK 465 SER B 4 REMARK 465 GLN B 5 REMARK 465 ALA B 6 REMARK 465 GLU B 7 REMARK 465 ASP B 8 REMARK 465 VAL B 9 REMARK 465 ARG B 10 REMARK 465 VAL B 11 REMARK 465 GLU B 12 REMARK 465 GLY B 13 REMARK 465 THR B 83 REMARK 465 PRO B 84 REMARK 465 MET B 85 REMARK 465 GLU B 86 REMARK 465 TYR B 87 REMARK 465 LYS B 88 REMARK 465 GLY B 89 REMARK 465 GLU B 90 REMARK 465 THR C 1 REMARK 465 GLY C 2 REMARK 465 GLY C 48 REMARK 465 LEU C 338 REMARK 465 ASP C 339 REMARK 465 ALA D 1 REMARK 465 SER D 2 REMARK 465 ARG D 3 REMARK 465 SER D 4 REMARK 465 GLN D 5 REMARK 465 ALA D 6 REMARK 465 GLU D 7 REMARK 465 ASP D 8 REMARK 465 VAL D 9 REMARK 465 ARG D 10 REMARK 465 VAL D 11 REMARK 465 GLU D 12 REMARK 465 GLY D 13 REMARK 465 PRO D 84 REMARK 465 MET D 85 REMARK 465 GLU D 86 REMARK 465 TYR D 87 REMARK 465 LYS D 88 REMARK 465 GLY D 89 REMARK 465 GLU D 90 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 5 CG CD OE1 NE2 REMARK 470 LYS A 25 CG CD CE NZ REMARK 470 ASP A 28 CG OD1 OD2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 470 VAL A 41 CG1 CG2 REMARK 470 THR A 42 OG1 CG2 REMARK 470 ILE A 44 CG1 CG2 CD1 REMARK 470 GLN A 45 CG CD OE1 NE2 REMARK 470 PRO A 47 CG CD REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 MET A 52 CG SD CE REMARK 470 SER A 55 OG REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 GLU A 104 CG CD OE1 OE2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 ASN A 321 CG OD1 ND2 REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 ASP A 326 CG OD1 OD2 REMARK 470 ILE A 331 CG1 CG2 CD1 REMARK 470 LYS A 336 CG CD CE NZ REMARK 470 ASP A 337 CG OD1 OD2 REMARK 470 GLU B 45 CG CD OE1 OE2 REMARK 470 GLU B 53 CG CD OE1 OE2 REMARK 470 GLN B 55 CG CD OE1 NE2 REMARK 470 ASN B 56 CG OD1 ND2 REMARK 470 MET B 57 CG SD CE REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 LEU B 67 CG CD1 CD2 REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 HIS B 82 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 91 CG CD1 CD2 REMARK 470 ARG B 100 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 LYS B 208 CG CD CE NZ REMARK 470 LYS B 210 CG CD CE NZ REMARK 470 VAL B 321 CG1 CG2 REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 470 ARG B 344 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 347 CG CD CE NZ REMARK 470 GLN C 5 CG CD OE1 NE2 REMARK 470 LYS C 25 CG CD CE NZ REMARK 470 ASP C 28 CG OD1 OD2 REMARK 470 LYS C 31 CG CD CE NZ REMARK 470 VAL C 41 CG1 CG2 REMARK 470 THR C 42 OG1 CG2 REMARK 470 ILE C 44 CG1 CG2 CD1 REMARK 470 GLN C 45 CG CD OE1 NE2 REMARK 470 PRO C 47 CG CD REMARK 470 LYS C 50 CG CD CE NZ REMARK 470 MET C 52 CG SD CE REMARK 470 SER C 55 OG REMARK 470 LYS C 58 CG CD CE NZ REMARK 470 GLU C 104 CG CD OE1 OE2 REMARK 470 LYS C 196 CG CD CE NZ REMARK 470 LYS C 199 CG CD CE NZ REMARK 470 LYS C 309 CG CD CE NZ REMARK 470 LYS C 312 CG CD CE NZ REMARK 470 ASN C 321 CG OD1 ND2 REMARK 470 LYS C 323 CG CD CE NZ REMARK 470 ASP C 326 CG OD1 OD2 REMARK 470 ILE C 331 CG1 CG2 CD1 REMARK 470 LYS C 336 CG CD CE NZ REMARK 470 ASP C 337 CG OD1 OD2 REMARK 470 GLU D 45 CG CD OE1 OE2 REMARK 470 GLN D 47 CG CD OE1 NE2 REMARK 470 GLU D 53 CG CD OE1 OE2 REMARK 470 VAL D 54 CG1 CG2 REMARK 470 GLN D 55 CG CD OE1 NE2 REMARK 470 ASN D 56 CG OD1 ND2 REMARK 470 MET D 57 CG SD CE REMARK 470 LYS D 62 CG CD CE NZ REMARK 470 LEU D 67 CG CD1 CD2 REMARK 470 GLU D 72 CG CD OE1 OE2 REMARK 470 LYS D 80 CG CD CE NZ REMARK 470 HIS D 82 CG ND1 CD2 CE1 NE2 REMARK 470 LEU D 91 CG CD1 CD2 REMARK 470 ARG D 100 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 101 CG CD CE NZ REMARK 470 LYS D 208 CG CD CE NZ REMARK 470 LYS D 210 CG CD CE NZ REMARK 470 VAL D 321 CG1 CG2 REMARK 470 GLU D 340 CG CD OE1 OE2 REMARK 470 ARG D 344 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 347 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 84 N7N NAD A 401 1.36 REMARK 500 ND2 ASN C 84 N7N NAD C 401 1.36 REMARK 500 O HIS C 80 NZ LYS D 189 1.90 REMARK 500 CA GLY C 264 O1A NAD C 401 1.93 REMARK 500 OD1 ASP B 23 OG SER B 52 2.05 REMARK 500 O ASN D 56 OH TYR D 94 2.06 REMARK 500 OE2 GLU A 37 OG SER A 60 2.09 REMARK 500 O LYS D 71 NZ LYS D 74 2.12 REMARK 500 O2D NAD C 401 O3 ICT C 403 2.15 REMARK 500 O CYS A 332 CG2 VAL A 335 2.16 REMARK 500 O HIS A 80 NZ LYS B 189 2.18 REMARK 500 OD1 ASP B 95 NH1 ARG B 99 2.19 REMARK 500 OG SER C 82 O4 ICT C 403 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 PRO B 115 CD PRO B 115 N -0.119 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER D 59 O - C - N ANGL. DEV. = -12.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 78 -76.29 -135.82 REMARK 500 GLU A 123 -130.68 -119.80 REMARK 500 ASP A 220 -92.80 -129.24 REMARK 500 LEU A 243 1.04 -69.45 REMARK 500 LYS A 312 -53.41 72.89 REMARK 500 LYS B 74 -18.34 71.92 REMARK 500 ILE B 81 -60.75 -103.45 REMARK 500 HIS B 121 57.85 -149.08 REMARK 500 GLN B 132 42.61 -141.33 REMARK 500 GLU B 134 -147.97 -141.48 REMARK 500 ASN B 226 82.96 -156.52 REMARK 500 ASP B 231 -103.69 58.01 REMARK 500 ALA B 254 173.50 -59.90 REMARK 500 SER B 263 -155.10 -118.45 REMARK 500 LEU B 304 62.85 -109.63 REMARK 500 PRO C 33 6.37 -62.86 REMARK 500 ALA C 78 -113.59 -132.29 REMARK 500 GLU C 123 -132.37 -122.79 REMARK 500 ALA C 174 1.48 -66.67 REMARK 500 MET C 177 76.93 -104.96 REMARK 500 ASP C 220 -93.28 -126.05 REMARK 500 LYS C 312 -62.48 66.18 REMARK 500 LYS D 74 -6.76 74.36 REMARK 500 HIS D 82 -127.37 53.99 REMARK 500 GLN D 132 41.31 -141.27 REMARK 500 GLU D 134 -146.14 -145.78 REMARK 500 ASN D 226 83.38 -161.50 REMARK 500 ASP D 231 -105.66 59.44 REMARK 500 ALA D 254 -178.99 -60.63 REMARK 500 SER D 263 -146.57 -122.82 REMARK 500 ALA D 278 -59.02 66.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER D 59 -19.37 REMARK 500 CYS D 220 -12.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 230 OD1 REMARK 620 2 ICT A 403 O7 62.1 REMARK 620 3 ASP B 217 OD2 71.9 65.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 230 OD1 REMARK 620 2 ICT C 403 O7 78.5 REMARK 620 3 ASP D 217 OD2 74.6 71.6 REMARK 620 N 1 2 DBREF 8GRU A 1 339 UNP P50213 IDH3A_HUMAN 28 366 DBREF 8GRU B 1 340 UNP O43837-2 IDH3B_HUMAN 35 374 DBREF 8GRU C 1 339 UNP P50213 IDH3A_HUMAN 28 366 DBREF 8GRU D 1 340 UNP O43837-2 IDH3B_HUMAN 35 374 SEQADV 8GRU ALA A 139 UNP P50213 GLN 166 ENGINEERED MUTATION SEQADV 8GRU GLU B 341 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ILE B 342 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU CYS B 343 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ARG B 344 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ARG B 345 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU VAL B 346 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU LYS B 347 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASP B 348 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU LEU B 349 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASP B 350 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU GLU B 351 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASN B 352 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ALA C 139 UNP P50213 GLN 166 ENGINEERED MUTATION SEQADV 8GRU GLU D 341 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ILE D 342 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU CYS D 343 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ARG D 344 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ARG D 345 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU VAL D 346 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU LYS D 347 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASP D 348 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU LEU D 349 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASP D 350 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU GLU D 351 UNP O43837-2 EXPRESSION TAG SEQADV 8GRU ASN D 352 UNP O43837-2 EXPRESSION TAG SEQRES 1 A 339 THR GLY GLY VAL GLN THR VAL THR LEU ILE PRO GLY ASP SEQRES 2 A 339 GLY ILE GLY PRO GLU ILE SER ALA ALA VAL MET LYS ILE SEQRES 3 A 339 PHE ASP ALA ALA LYS ALA PRO ILE GLN TRP GLU GLU ARG SEQRES 4 A 339 ASN VAL THR ALA ILE GLN GLY PRO GLY GLY LYS TRP MET SEQRES 5 A 339 ILE PRO SER GLU ALA LYS GLU SER MET ASP LYS ASN LYS SEQRES 6 A 339 MET GLY LEU LYS GLY PRO LEU LYS THR PRO ILE ALA ALA SEQRES 7 A 339 GLY HIS PRO SER MET ASN LEU LEU LEU ARG LYS THR PHE SEQRES 8 A 339 ASP LEU TYR ALA ASN VAL ARG PRO CYS VAL SER ILE GLU SEQRES 9 A 339 GLY TYR LYS THR PRO TYR THR ASP VAL ASN ILE VAL THR SEQRES 10 A 339 ILE ARG GLU ASN THR GLU GLY GLU TYR SER GLY ILE GLU SEQRES 11 A 339 HIS VAL ILE VAL ASP GLY VAL VAL ALA SER ILE LYS LEU SEQRES 12 A 339 ILE THR GLU GLY ALA SER LYS ARG ILE ALA GLU PHE ALA SEQRES 13 A 339 PHE GLU TYR ALA ARG ASN ASN HIS ARG SER ASN VAL THR SEQRES 14 A 339 ALA VAL HIS LYS ALA ASN ILE MET ARG MET SER ASP GLY SEQRES 15 A 339 LEU PHE LEU GLN LYS CYS ARG GLU VAL ALA GLU SER CYS SEQRES 16 A 339 LYS ASP ILE LYS PHE ASN GLU MET TYR LEU ASP THR VAL SEQRES 17 A 339 CYS LEU ASN MET VAL GLN ASP PRO SER GLN PHE ASP VAL SEQRES 18 A 339 LEU VAL MET PRO ASN LEU TYR GLY ASP ILE LEU SER ASP SEQRES 19 A 339 LEU CYS ALA GLY LEU ILE GLY GLY LEU GLY VAL THR PRO SEQRES 20 A 339 SER GLY ASN ILE GLY ALA ASN GLY VAL ALA ILE PHE GLU SEQRES 21 A 339 SER VAL HIS GLY THR ALA PRO ASP ILE ALA GLY LYS ASP SEQRES 22 A 339 MET ALA ASN PRO THR ALA LEU LEU LEU SER ALA VAL MET SEQRES 23 A 339 MET LEU ARG HIS MET GLY LEU PHE ASP HIS ALA ALA ARG SEQRES 24 A 339 ILE GLU ALA ALA CYS PHE ALA THR ILE LYS ASP GLY LYS SEQRES 25 A 339 SER LEU THR LYS ASP LEU GLY GLY ASN ALA LYS CYS SER SEQRES 26 A 339 ASP PHE THR GLU GLU ILE CYS ARG ARG VAL LYS ASP LEU SEQRES 27 A 339 ASP SEQRES 1 B 352 ALA SER ARG SER GLN ALA GLU ASP VAL ARG VAL GLU GLY SEQRES 2 B 352 SER PHE PRO VAL THR MET LEU PRO GLY ASP GLY VAL GLY SEQRES 3 B 352 PRO GLU LEU MET HIS ALA VAL LYS GLU VAL PHE LYS ALA SEQRES 4 B 352 ALA ALA VAL PRO VAL GLU PHE GLN GLU HIS HIS LEU SER SEQRES 5 B 352 GLU VAL GLN ASN MET ALA SER GLU GLU LYS LEU GLU GLN SEQRES 6 B 352 VAL LEU SER SER MET LYS GLU ASN LYS VAL ALA ILE ILE SEQRES 7 B 352 GLY LYS ILE HIS THR PRO MET GLU TYR LYS GLY GLU LEU SEQRES 8 B 352 ALA SER TYR ASP MET ARG LEU ARG ARG LYS LEU ASP LEU SEQRES 9 B 352 PHE ALA ASN VAL VAL HIS VAL LYS SER LEU PRO GLY TYR SEQRES 10 B 352 MET THR ARG HIS ASN ASN LEU ASP LEU VAL ILE ILE ARG SEQRES 11 B 352 GLU GLN THR GLU GLY GLU TYR SER SER LEU GLU HIS GLU SEQRES 12 B 352 SER ALA ARG GLY VAL ILE GLU CYS LEU LYS ILE VAL THR SEQRES 13 B 352 ARG ALA LYS SER GLN ARG ILE ALA LYS PHE ALA PHE ASP SEQRES 14 B 352 TYR ALA THR LYS LYS GLY ARG GLY LYS VAL THR ALA VAL SEQRES 15 B 352 HIS LYS ALA ASN ILE MET LYS LEU GLY ASP GLY LEU PHE SEQRES 16 B 352 LEU GLN CYS CYS GLU GLU VAL ALA GLU LEU TYR PRO LYS SEQRES 17 B 352 ILE LYS PHE GLU THR MET ILE ILE ASP ASN CYS CYS MET SEQRES 18 B 352 GLN LEU VAL GLN ASN PRO TYR GLN PHE ASP VAL LEU VAL SEQRES 19 B 352 MET PRO ASN LEU TYR GLY ASN ILE ILE ASP ASN LEU ALA SEQRES 20 B 352 ALA GLY LEU VAL GLY GLY ALA GLY VAL VAL PRO GLY GLU SEQRES 21 B 352 SER TYR SER ALA GLU TYR ALA VAL PHE GLU THR GLY ALA SEQRES 22 B 352 ARG HIS PRO PHE ALA GLN ALA VAL GLY ARG ASN ILE ALA SEQRES 23 B 352 ASN PRO THR ALA MET LEU LEU SER ALA SER ASN MET LEU SEQRES 24 B 352 ARG HIS LEU ASN LEU GLU TYR HIS SER SER MET ILE ALA SEQRES 25 B 352 ASP ALA VAL LYS LYS VAL ILE LYS VAL GLY LYS VAL ARG SEQRES 26 B 352 THR SER ASP MET GLY GLY TYR ALA THR CYS HIS ASP PHE SEQRES 27 B 352 THR GLU GLU ILE CYS ARG ARG VAL LYS ASP LEU ASP GLU SEQRES 28 B 352 ASN SEQRES 1 C 339 THR GLY GLY VAL GLN THR VAL THR LEU ILE PRO GLY ASP SEQRES 2 C 339 GLY ILE GLY PRO GLU ILE SER ALA ALA VAL MET LYS ILE SEQRES 3 C 339 PHE ASP ALA ALA LYS ALA PRO ILE GLN TRP GLU GLU ARG SEQRES 4 C 339 ASN VAL THR ALA ILE GLN GLY PRO GLY GLY LYS TRP MET SEQRES 5 C 339 ILE PRO SER GLU ALA LYS GLU SER MET ASP LYS ASN LYS SEQRES 6 C 339 MET GLY LEU LYS GLY PRO LEU LYS THR PRO ILE ALA ALA SEQRES 7 C 339 GLY HIS PRO SER MET ASN LEU LEU LEU ARG LYS THR PHE SEQRES 8 C 339 ASP LEU TYR ALA ASN VAL ARG PRO CYS VAL SER ILE GLU SEQRES 9 C 339 GLY TYR LYS THR PRO TYR THR ASP VAL ASN ILE VAL THR SEQRES 10 C 339 ILE ARG GLU ASN THR GLU GLY GLU TYR SER GLY ILE GLU SEQRES 11 C 339 HIS VAL ILE VAL ASP GLY VAL VAL ALA SER ILE LYS LEU SEQRES 12 C 339 ILE THR GLU GLY ALA SER LYS ARG ILE ALA GLU PHE ALA SEQRES 13 C 339 PHE GLU TYR ALA ARG ASN ASN HIS ARG SER ASN VAL THR SEQRES 14 C 339 ALA VAL HIS LYS ALA ASN ILE MET ARG MET SER ASP GLY SEQRES 15 C 339 LEU PHE LEU GLN LYS CYS ARG GLU VAL ALA GLU SER CYS SEQRES 16 C 339 LYS ASP ILE LYS PHE ASN GLU MET TYR LEU ASP THR VAL SEQRES 17 C 339 CYS LEU ASN MET VAL GLN ASP PRO SER GLN PHE ASP VAL SEQRES 18 C 339 LEU VAL MET PRO ASN LEU TYR GLY ASP ILE LEU SER ASP SEQRES 19 C 339 LEU CYS ALA GLY LEU ILE GLY GLY LEU GLY VAL THR PRO SEQRES 20 C 339 SER GLY ASN ILE GLY ALA ASN GLY VAL ALA ILE PHE GLU SEQRES 21 C 339 SER VAL HIS GLY THR ALA PRO ASP ILE ALA GLY LYS ASP SEQRES 22 C 339 MET ALA ASN PRO THR ALA LEU LEU LEU SER ALA VAL MET SEQRES 23 C 339 MET LEU ARG HIS MET GLY LEU PHE ASP HIS ALA ALA ARG SEQRES 24 C 339 ILE GLU ALA ALA CYS PHE ALA THR ILE LYS ASP GLY LYS SEQRES 25 C 339 SER LEU THR LYS ASP LEU GLY GLY ASN ALA LYS CYS SER SEQRES 26 C 339 ASP PHE THR GLU GLU ILE CYS ARG ARG VAL LYS ASP LEU SEQRES 27 C 339 ASP SEQRES 1 D 352 ALA SER ARG SER GLN ALA GLU ASP VAL ARG VAL GLU GLY SEQRES 2 D 352 SER PHE PRO VAL THR MET LEU PRO GLY ASP GLY VAL GLY SEQRES 3 D 352 PRO GLU LEU MET HIS ALA VAL LYS GLU VAL PHE LYS ALA SEQRES 4 D 352 ALA ALA VAL PRO VAL GLU PHE GLN GLU HIS HIS LEU SER SEQRES 5 D 352 GLU VAL GLN ASN MET ALA SER GLU GLU LYS LEU GLU GLN SEQRES 6 D 352 VAL LEU SER SER MET LYS GLU ASN LYS VAL ALA ILE ILE SEQRES 7 D 352 GLY LYS ILE HIS THR PRO MET GLU TYR LYS GLY GLU LEU SEQRES 8 D 352 ALA SER TYR ASP MET ARG LEU ARG ARG LYS LEU ASP LEU SEQRES 9 D 352 PHE ALA ASN VAL VAL HIS VAL LYS SER LEU PRO GLY TYR SEQRES 10 D 352 MET THR ARG HIS ASN ASN LEU ASP LEU VAL ILE ILE ARG SEQRES 11 D 352 GLU GLN THR GLU GLY GLU TYR SER SER LEU GLU HIS GLU SEQRES 12 D 352 SER ALA ARG GLY VAL ILE GLU CYS LEU LYS ILE VAL THR SEQRES 13 D 352 ARG ALA LYS SER GLN ARG ILE ALA LYS PHE ALA PHE ASP SEQRES 14 D 352 TYR ALA THR LYS LYS GLY ARG GLY LYS VAL THR ALA VAL SEQRES 15 D 352 HIS LYS ALA ASN ILE MET LYS LEU GLY ASP GLY LEU PHE SEQRES 16 D 352 LEU GLN CYS CYS GLU GLU VAL ALA GLU LEU TYR PRO LYS SEQRES 17 D 352 ILE LYS PHE GLU THR MET ILE ILE ASP ASN CYS CYS MET SEQRES 18 D 352 GLN LEU VAL GLN ASN PRO TYR GLN PHE ASP VAL LEU VAL SEQRES 19 D 352 MET PRO ASN LEU TYR GLY ASN ILE ILE ASP ASN LEU ALA SEQRES 20 D 352 ALA GLY LEU VAL GLY GLY ALA GLY VAL VAL PRO GLY GLU SEQRES 21 D 352 SER TYR SER ALA GLU TYR ALA VAL PHE GLU THR GLY ALA SEQRES 22 D 352 ARG HIS PRO PHE ALA GLN ALA VAL GLY ARG ASN ILE ALA SEQRES 23 D 352 ASN PRO THR ALA MET LEU LEU SER ALA SER ASN MET LEU SEQRES 24 D 352 ARG HIS LEU ASN LEU GLU TYR HIS SER SER MET ILE ALA SEQRES 25 D 352 ASP ALA VAL LYS LYS VAL ILE LYS VAL GLY LYS VAL ARG SEQRES 26 D 352 THR SER ASP MET GLY GLY TYR ALA THR CYS HIS ASP PHE SEQRES 27 D 352 THR GLU GLU ILE CYS ARG ARG VAL LYS ASP LEU ASP GLU SEQRES 28 D 352 ASN HET NAD A 401 44 HET CA A 402 1 HET ICT A 403 13 HET NAD B 401 44 HET NAD C 401 44 HET CA C 402 1 HET ICT C 403 13 HET NAD D 401 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM CA CALCIUM ION HETNAM ICT ISOCITRIC ACID FORMUL 5 NAD 4(C21 H27 N7 O14 P2) FORMUL 6 CA 2(CA 2+) FORMUL 7 ICT 2(C6 H8 O7) HELIX 1 AA1 ILE A 15 LYS A 31 1 17 HELIX 2 AA2 PRO A 54 LYS A 65 1 12 HELIX 3 AA3 SER A 82 PHE A 91 1 10 HELIX 4 AA4 GLU A 123 SER A 127 5 5 HELIX 5 AA5 GLU A 146 ASN A 163 1 18 HELIX 6 AA6 MET A 179 SER A 194 1 16 HELIX 7 AA7 LEU A 205 VAL A 213 1 9 HELIX 8 AA8 ASP A 215 PHE A 219 5 5 HELIX 9 AA9 PRO A 225 GLY A 241 1 17 HELIX 10 AB1 ALA A 253 GLY A 255 5 3 HELIX 11 AB2 ALA A 266 ALA A 270 5 5 HELIX 12 AB3 PRO A 277 MET A 291 1 15 HELIX 13 AB4 LEU A 293 GLY A 311 1 19 HELIX 14 AB5 THR A 315 GLY A 319 5 5 HELIX 15 AB6 LYS A 323 ASP A 337 1 15 HELIX 16 AB7 VAL B 25 ALA B 41 1 17 HELIX 17 AB8 ALA B 58 LYS B 74 1 17 HELIX 18 AB9 SER B 93 LEU B 102 1 10 HELIX 19 AC1 GLU B 134 SER B 138 5 5 HELIX 20 AC2 ARG B 157 GLY B 175 1 19 HELIX 21 AC3 LEU B 190 GLU B 204 1 15 HELIX 22 AC4 ILE B 216 ASN B 226 1 11 HELIX 23 AC5 PRO B 227 PHE B 230 5 4 HELIX 24 AC6 PRO B 236 VAL B 251 1 16 HELIX 25 AC7 PHE B 277 VAL B 281 5 5 HELIX 26 AC8 PRO B 288 LEU B 302 1 15 HELIX 27 AC9 LEU B 304 GLY B 322 1 19 HELIX 28 AD1 THR B 326 GLY B 330 5 5 HELIX 29 AD2 THR B 334 ASN B 352 1 19 HELIX 30 AD3 ILE C 15 LYS C 31 1 17 HELIX 31 AD4 PRO C 54 LYS C 65 1 12 HELIX 32 AD5 SER C 82 PHE C 91 1 10 HELIX 33 AD6 GLU C 123 SER C 127 5 5 HELIX 34 AD7 GLU C 146 ASN C 163 1 18 HELIX 35 AD8 MET C 177 CYS C 195 1 19 HELIX 36 AD9 LEU C 205 VAL C 213 1 9 HELIX 37 AE1 ASP C 215 PHE C 219 5 5 HELIX 38 AE2 PRO C 225 GLY C 238 1 14 HELIX 39 AE3 GLY C 242 VAL C 245 5 4 HELIX 40 AE4 PRO C 277 MET C 291 1 15 HELIX 41 AE5 LEU C 293 GLY C 311 1 19 HELIX 42 AE6 LYS C 323 ASP C 337 1 15 HELIX 43 AE7 VAL D 25 ALA D 41 1 17 HELIX 44 AE8 ALA D 58 LYS D 74 1 17 HELIX 45 AE9 SER D 93 LEU D 102 1 10 HELIX 46 AF1 GLU D 134 SER D 138 5 5 HELIX 47 AF2 ARG D 157 LYS D 174 1 18 HELIX 48 AF3 LEU D 190 GLU D 204 1 15 HELIX 49 AF4 ILE D 216 ASN D 226 1 11 HELIX 50 AF5 PRO D 227 PHE D 230 5 4 HELIX 51 AF6 PRO D 236 VAL D 251 1 16 HELIX 52 AF7 PRO D 288 LEU D 302 1 15 HELIX 53 AF8 LEU D 304 GLY D 322 1 19 HELIX 54 AF9 THR D 326 GLY D 330 5 5 HELIX 55 AG1 THR D 334 ASN D 352 1 19 SHEET 1 AA110 ILE A 34 GLU A 38 0 SHEET 2 AA110 GLN A 5 ILE A 10 1 N LEU A 9 O GLU A 37 SHEET 3 AA110 MET A 66 LYS A 69 1 O MET A 66 N THR A 8 SHEET 4 AA110 ALA A 257 SER A 261 1 O PHE A 259 N GLY A 67 SHEET 5 AA110 PRO A 247 ILE A 251 -1 N ASN A 250 O ILE A 258 SHEET 6 AA110 ALA A 95 VAL A 101 -1 N ALA A 95 O ILE A 251 SHEET 7 AA110 ASN A 114 GLU A 120 -1 O ILE A 115 N CYS A 100 SHEET 8 AA110 VAL A 221 MET A 224 1 O LEU A 222 N ILE A 118 SHEET 9 AA110 ASN A 167 HIS A 172 1 N VAL A 171 O VAL A 223 SHEET 10 AA110 LYS A 199 TYR A 204 1 O ASN A 201 N ALA A 170 SHEET 1 AA2 4 GLU A 130 VAL A 134 0 SHEET 2 AA2 4 VAL A 137 THR A 145 -1 O ALA A 139 N HIS A 131 SHEET 3 AA2 4 VAL B 148 THR B 156 -1 O CYS B 151 N LYS A 142 SHEET 4 AA2 4 GLU B 141 ALA B 145 -1 N HIS B 142 O GLU B 150 SHEET 1 AA310 VAL B 44 GLU B 48 0 SHEET 2 AA310 PHE B 15 LEU B 20 1 N VAL B 17 O GLN B 47 SHEET 3 AA310 VAL B 75 ILE B 78 1 O ILE B 77 N THR B 18 SHEET 4 AA310 ALA B 267 THR B 271 1 O PHE B 269 N ILE B 78 SHEET 5 AA310 PRO B 258 TYR B 262 -1 N GLY B 259 O GLU B 270 SHEET 6 AA310 ALA B 106 LYS B 112 -1 N VAL B 108 O GLU B 260 SHEET 7 AA310 ASP B 125 GLU B 131 -1 O LEU B 126 N VAL B 111 SHEET 8 AA310 VAL B 232 MET B 235 1 O LEU B 233 N ILE B 129 SHEET 9 AA310 LYS B 178 HIS B 183 1 N THR B 180 O VAL B 232 SHEET 10 AA310 LYS B 210 ILE B 215 1 O LYS B 210 N VAL B 179 SHEET 1 AA410 ILE C 34 GLU C 38 0 SHEET 2 AA410 GLN C 5 ILE C 10 1 N VAL C 7 O GLN C 35 SHEET 3 AA410 MET C 66 LYS C 69 1 O LEU C 68 N THR C 8 SHEET 4 AA410 ALA C 257 SER C 261 1 O PHE C 259 N GLY C 67 SHEET 5 AA410 PRO C 247 ILE C 251 -1 N ASN C 250 O ILE C 258 SHEET 6 AA410 ALA C 95 VAL C 101 -1 N ALA C 95 O ILE C 251 SHEET 7 AA410 ASN C 114 GLU C 120 -1 O ILE C 115 N CYS C 100 SHEET 8 AA410 VAL C 221 MET C 224 1 O LEU C 222 N ILE C 118 SHEET 9 AA410 ASN C 167 HIS C 172 1 N VAL C 171 O VAL C 223 SHEET 10 AA410 LYS C 199 TYR C 204 1 O ASN C 201 N ALA C 170 SHEET 1 AA5 4 GLU C 130 VAL C 134 0 SHEET 2 AA5 4 VAL C 137 THR C 145 -1 O ALA C 139 N HIS C 131 SHEET 3 AA5 4 VAL D 148 THR D 156 -1 O CYS D 151 N LYS C 142 SHEET 4 AA5 4 GLU D 141 ALA D 145 -1 N ALA D 145 O VAL D 148 SHEET 1 AA610 VAL D 44 GLU D 48 0 SHEET 2 AA610 PHE D 15 LEU D 20 1 N VAL D 17 O GLN D 47 SHEET 3 AA610 VAL D 75 ILE D 78 1 O VAL D 75 N THR D 18 SHEET 4 AA610 ALA D 267 THR D 271 1 O PHE D 269 N ILE D 78 SHEET 5 AA610 PRO D 258 TYR D 262 -1 N SER D 261 O VAL D 268 SHEET 6 AA610 ALA D 106 LYS D 112 -1 N VAL D 108 O GLU D 260 SHEET 7 AA610 ASP D 125 GLU D 131 -1 O LEU D 126 N VAL D 111 SHEET 8 AA610 VAL D 232 MET D 235 1 O LEU D 233 N ILE D 129 SHEET 9 AA610 LYS D 178 HIS D 183 1 N THR D 180 O VAL D 232 SHEET 10 AA610 LYS D 210 ILE D 215 1 O LYS D 210 N VAL D 179 LINK N GLY C 264 O1A NAD C 401 1555 1555 1.32 LINK OD1 ASP A 230 CA CA A 402 1555 1555 2.57 LINK CA CA A 402 O7 ICT A 403 1555 1555 3.09 LINK CA CA A 402 OD2 ASP B 217 1555 1555 2.76 LINK OD1 ASP C 230 CA CA C 402 1555 1555 2.61 LINK CA CA C 402 O7 ICT C 403 1555 1555 2.76 LINK CA CA C 402 OD2 ASP D 217 1555 1555 2.84 CRYST1 134.043 163.833 163.129 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007460 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006130 0.00000