data_8H0E # _entry.id 8H0E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8H0E pdb_00008h0e 10.2210/pdb8h0e/pdb WWPDB D_1300032562 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8H0E _pdbx_database_status.recvd_initial_deposition_date 2022-09-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Fan, S.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biophys.J. _citation.journal_id_ASTM BIOJAU _citation.journal_id_CSD 0030 _citation.journal_id_ISSN 1542-0086 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 122 _citation.language ? _citation.page_first 2686 _citation.page_last 2695 _citation.title 'Stability of collagen heterotrimer with same charge pattern and different charged residue identities.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.bpj.2023.05.023 _citation.pdbx_database_id_PubMed 37226442 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, Y.' 1 ? primary 'Lan, J.' 2 ? primary 'Wu, C.' 3 ? primary 'Zhang, R.' 4 ? primary 'Zheng, H.' 5 ? primary 'Fan, S.' 6 ? primary 'Xu, F.' 7 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 106.590 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8H0E _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.067 _cell.length_a_esd ? _cell.length_b 42.411 _cell.length_b_esd ? _cell.length_c 28.749 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8H0E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen-like peptide chain A' 3079.336 1 ? ? ? ? 2 polymer syn 'collagen-like peptide chain B' 3024.876 1 ? ? ? ? 3 polymer syn 'collagen-like peptide chain C' 3068.483 1 ? ? ? ? 4 water nat water 18.015 70 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes 'YGPKGPKGPKGK(HYP)GPDGD(HYP)GD(HYP)GD(HYP)GPKGPKG' YGPKGPKGPKGKPGPDGDPGDPGDPGPKGPKG A ? 2 'polypeptide(L)' no yes 'YGPDGD(HYP)GD(HYP)GD(HYP)GPDGK(HYP)GPDGPDGPDGD(HYP)G' YGPDGDPGDPGDPGPDGKPGPDGPDGPDGDPG B ? 3 'polypeptide(L)' no yes 'YGK(HYP)GPEGPEGPKGK(HYP)GPKGK(HYP)GK(HYP)GK(HYP)GKA' YGKPGPEGPEGPKGKPGPKGKPGKPGKPGKA C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 GLY n 1 3 PRO n 1 4 LYS n 1 5 GLY n 1 6 PRO n 1 7 LYS n 1 8 GLY n 1 9 PRO n 1 10 LYS n 1 11 GLY n 1 12 LYS n 1 13 HYP n 1 14 GLY n 1 15 PRO n 1 16 ASP n 1 17 GLY n 1 18 ASP n 1 19 HYP n 1 20 GLY n 1 21 ASP n 1 22 HYP n 1 23 GLY n 1 24 ASP n 1 25 HYP n 1 26 GLY n 1 27 PRO n 1 28 LYS n 1 29 GLY n 1 30 PRO n 1 31 LYS n 1 32 GLY n 2 1 TYR n 2 2 GLY n 2 3 PRO n 2 4 ASP n 2 5 GLY n 2 6 ASP n 2 7 HYP n 2 8 GLY n 2 9 ASP n 2 10 HYP n 2 11 GLY n 2 12 ASP n 2 13 HYP n 2 14 GLY n 2 15 PRO n 2 16 ASP n 2 17 GLY n 2 18 LYS n 2 19 HYP n 2 20 GLY n 2 21 PRO n 2 22 ASP n 2 23 GLY n 2 24 PRO n 2 25 ASP n 2 26 GLY n 2 27 PRO n 2 28 ASP n 2 29 GLY n 2 30 ASP n 2 31 HYP n 2 32 GLY n 3 1 TYR n 3 2 GLY n 3 3 LYS n 3 4 HYP n 3 5 GLY n 3 6 PRO n 3 7 GLU n 3 8 GLY n 3 9 PRO n 3 10 GLU n 3 11 GLY n 3 12 PRO n 3 13 LYS n 3 14 GLY n 3 15 LYS n 3 16 HYP n 3 17 GLY n 3 18 PRO n 3 19 LYS n 3 20 GLY n 3 21 LYS n 3 22 HYP n 3 23 GLY n 3 24 LYS n 3 25 HYP n 3 26 GLY n 3 27 LYS n 3 28 HYP n 3 29 GLY n 3 30 LYS n 3 31 ALA n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 32 'chemical production metagenome' ? 2495586 ? 2 1 sample 1 32 'chemical production metagenome' ? 2495586 ? 3 1 sample 1 31 'chemical production metagenome' ? 2495586 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8H0E 8H0E ? 1 ? 1 2 PDB 8H0E 8H0E ? 2 ? 1 3 PDB 8H0E 8H0E ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8H0E A 1 ? 32 ? 8H0E 1 ? 32 ? 1 32 2 2 8H0E B 1 ? 32 ? 8H0E 1 ? 32 ? 1 32 3 3 8H0E C 1 ? 31 ? 8H0E 1 ? 31 ? 1 31 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8H0E _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.76 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10% isopropanol, 0.1M Bicine pH 8.5, 30% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-05-13 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9789 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL17U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9789 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL17U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 23.350 _reflns.entry_id 8H0E _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.76 _reflns.d_resolution_low 29.26 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6945 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.62 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.0 _reflns.pdbx_Rmerge_I_obs 0.103 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 22.47 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 1.77 _reflns_shell.d_res_low 1.80 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 6884 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.103 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 78.310 _refine.B_iso_mean 35.0348 _refine.B_iso_min 19.550 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8H0E _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.7600 _refine.ls_d_res_low 29.2600 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6764 _refine.ls_number_reflns_R_free 343 _refine.ls_number_reflns_R_work 6421 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.9500 _refine.ls_percent_reflns_R_free 5.0700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2261 _refine.ls_R_factor_R_free 0.2577 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2245 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.400 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 5YAN _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 33.7700 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1800 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.7600 _refine_hist.d_res_low 29.2600 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 713 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 95 _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent 35.99 _refine_hist.pdbx_number_atoms_protein 643 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.7600 2.2100 3225 . 180 3045 91.0000 . . . 0.3140 0.0000 0.2526 . . . . . . . 2 . . . 'X-RAY DIFFRACTION' 2.2100 29.2600 3539 . 163 3376 99.0000 . . . 0.2393 0.0000 0.2165 . . . . . . . 2 . . . # _struct.entry_id 8H0E _struct.title 'Crystal structure of collagen heterotrimer with KD, ER and KE axial pairs' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8H0E _struct_keywords.text 'collagen, heterotrimer, triple helix, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 12 C ? ? ? 1_555 A HYP 13 N ? ? A LYS 12 A HYP 13 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale2 covale both ? A HYP 13 C ? ? ? 1_555 A GLY 14 N ? ? A HYP 13 A GLY 14 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A ASP 18 C ? ? ? 1_555 A HYP 19 N ? ? A ASP 18 A HYP 19 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? A HYP 19 C ? ? ? 1_555 A GLY 20 N ? ? A HYP 19 A GLY 20 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A ASP 21 C ? ? ? 1_555 A HYP 22 N ? ? A ASP 21 A HYP 22 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A HYP 22 C ? ? ? 1_555 A GLY 23 N ? ? A HYP 22 A GLY 23 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale7 covale both ? A ASP 24 C ? ? ? 1_555 A HYP 25 N ? ? A ASP 24 A HYP 25 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A HYP 25 C ? ? ? 1_555 A GLY 26 N ? ? A HYP 25 A GLY 26 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale9 covale both ? B ASP 6 C ? ? ? 1_555 B HYP 7 N ? ? B ASP 6 B HYP 7 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale10 covale both ? B HYP 7 C ? ? ? 1_555 B GLY 8 N ? ? B HYP 7 B GLY 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale11 covale both ? B ASP 9 C ? ? ? 1_555 B HYP 10 N ? ? B ASP 9 B HYP 10 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale both ? B HYP 10 C ? ? ? 1_555 B GLY 11 N ? ? B HYP 10 B GLY 11 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale13 covale both ? B ASP 12 C ? ? ? 1_555 B HYP 13 N ? ? B ASP 12 B HYP 13 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale14 covale both ? B HYP 13 C ? ? ? 1_555 B GLY 14 N ? ? B HYP 13 B GLY 14 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? B LYS 18 C ? ? ? 1_555 B HYP 19 N ? ? B LYS 18 B HYP 19 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale16 covale both ? B HYP 19 C ? ? ? 1_555 B GLY 20 N ? ? B HYP 19 B GLY 20 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale17 covale both ? B ASP 30 C ? ? ? 1_555 B HYP 31 N ? ? B ASP 30 B HYP 31 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale18 covale both ? B HYP 31 C ? ? ? 1_555 B GLY 32 N ? ? B HYP 31 B GLY 32 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? C LYS 3 C ? ? ? 1_555 C HYP 4 N ? ? C LYS 3 C HYP 4 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale20 covale both ? C HYP 4 C ? ? ? 1_555 C GLY 5 N ? ? C HYP 4 C GLY 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale21 covale both ? C LYS 15 C ? ? ? 1_555 C HYP 16 N ? ? C LYS 15 C HYP 16 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale22 covale both ? C HYP 16 C ? ? ? 1_555 C GLY 17 N ? ? C HYP 16 C GLY 17 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale23 covale both ? C LYS 21 C ? ? ? 1_555 C HYP 22 N ? ? C LYS 21 C HYP 22 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale24 covale both ? C HYP 22 C ? ? ? 1_555 C GLY 23 N ? ? C HYP 22 C GLY 23 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale25 covale both ? C LYS 24 C ? ? ? 1_555 C HYP 25 N ? ? C LYS 24 C HYP 25 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale26 covale both ? C HYP 25 C ? ? ? 1_555 C GLY 26 N ? ? C HYP 25 C GLY 26 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale27 covale both ? C LYS 27 C ? ? ? 1_555 C HYP 28 N ? ? C LYS 27 C HYP 28 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale28 covale both ? C HYP 28 C ? ? ? 1_555 C GLY 29 N ? ? C HYP 28 C GLY 29 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 8H0E _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016375 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004879 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.036295 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 1 TYR TYR A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 HYP 13 13 13 HYP HYP A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 HYP 19 19 19 HYP HYP A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 HYP 22 22 22 HYP HYP A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 HYP 25 25 25 HYP HYP A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLY 32 32 32 GLY GLY A . n B 2 1 TYR 1 1 1 TYR TYR B . n B 2 2 GLY 2 2 2 GLY GLY B . n B 2 3 PRO 3 3 3 PRO PRO B . n B 2 4 ASP 4 4 4 ASP ASP B . n B 2 5 GLY 5 5 5 GLY GLY B . n B 2 6 ASP 6 6 6 ASP ASP B . n B 2 7 HYP 7 7 7 HYP HYP B . n B 2 8 GLY 8 8 8 GLY GLY B . n B 2 9 ASP 9 9 9 ASP ASP B . n B 2 10 HYP 10 10 10 HYP HYP B . n B 2 11 GLY 11 11 11 GLY GLY B . n B 2 12 ASP 12 12 12 ASP ASP B . n B 2 13 HYP 13 13 13 HYP HYP B . n B 2 14 GLY 14 14 14 GLY GLY B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 ASP 16 16 16 ASP ASP B . n B 2 17 GLY 17 17 17 GLY GLY B . n B 2 18 LYS 18 18 18 LYS LYS B . n B 2 19 HYP 19 19 19 HYP HYP B . n B 2 20 GLY 20 20 20 GLY GLY B . n B 2 21 PRO 21 21 21 PRO PRO B . n B 2 22 ASP 22 22 22 ASP ASP B . n B 2 23 GLY 23 23 23 GLY GLY B . n B 2 24 PRO 24 24 24 PRO PRO B . n B 2 25 ASP 25 25 25 ASP ASP B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 PRO 27 27 27 PRO PRO B . n B 2 28 ASP 28 28 28 ASP ASP B . n B 2 29 GLY 29 29 29 GLY GLY B . n B 2 30 ASP 30 30 30 ASP ASP B . n B 2 31 HYP 31 31 31 HYP HYP B . n B 2 32 GLY 32 32 32 GLY GLY B . n C 3 1 TYR 1 1 1 TYR TYR C . n C 3 2 GLY 2 2 2 GLY GLY C . n C 3 3 LYS 3 3 3 LYS LYS C . n C 3 4 HYP 4 4 4 HYP HYP C . n C 3 5 GLY 5 5 5 GLY GLY C . n C 3 6 PRO 6 6 6 PRO PRO C . n C 3 7 GLU 7 7 7 GLU GLU C . n C 3 8 GLY 8 8 8 GLY GLY C . n C 3 9 PRO 9 9 9 PRO PRO C . n C 3 10 GLU 10 10 10 GLU GLU C . n C 3 11 GLY 11 11 11 GLY GLY C . n C 3 12 PRO 12 12 12 PRO PRO C . n C 3 13 LYS 13 13 13 LYS LYS C . n C 3 14 GLY 14 14 14 GLY GLY C . n C 3 15 LYS 15 15 15 LYS LYS C . n C 3 16 HYP 16 16 16 HYP HYP C . n C 3 17 GLY 17 17 17 GLY GLY C . n C 3 18 PRO 18 18 18 PRO PRO C . n C 3 19 LYS 19 19 19 LYS LYS C . n C 3 20 GLY 20 20 20 GLY GLY C . n C 3 21 LYS 21 21 21 LYS LYS C . n C 3 22 HYP 22 22 22 HYP HYP C . n C 3 23 GLY 23 23 23 GLY GLY C . n C 3 24 LYS 24 24 24 LYS LYS C . n C 3 25 HYP 25 25 25 HYP HYP C . n C 3 26 GLY 26 26 26 GLY GLY C . n C 3 27 LYS 27 27 27 LYS LYS C . n C 3 28 HYP 28 28 28 HYP HYP C . n C 3 29 GLY 29 29 29 GLY GLY C . n C 3 30 LYS 30 30 30 LYS LYS C . n C 3 31 ALA 31 31 31 ALA ALA C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email feixu@jiangnan.edu.cn _pdbx_contact_author.name_first Fei _pdbx_contact_author.name_last Xu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1077-0431 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 101 59 HOH HOH A . D 4 HOH 2 102 30 HOH HOH A . D 4 HOH 3 103 16 HOH HOH A . D 4 HOH 4 104 6 HOH HOH A . D 4 HOH 5 105 14 HOH HOH A . D 4 HOH 6 106 70 HOH HOH A . D 4 HOH 7 107 12 HOH HOH A . D 4 HOH 8 108 13 HOH HOH A . D 4 HOH 9 109 48 HOH HOH A . D 4 HOH 10 110 15 HOH HOH A . D 4 HOH 11 111 49 HOH HOH A . D 4 HOH 12 112 31 HOH HOH A . D 4 HOH 13 113 34 HOH HOH A . D 4 HOH 14 114 68 HOH HOH A . E 4 HOH 1 101 2 HOH HOH B . E 4 HOH 2 102 4 HOH HOH B . E 4 HOH 3 103 57 HOH HOH B . E 4 HOH 4 104 10 HOH HOH B . E 4 HOH 5 105 56 HOH HOH B . E 4 HOH 6 106 38 HOH HOH B . E 4 HOH 7 107 1 HOH HOH B . E 4 HOH 8 108 36 HOH HOH B . E 4 HOH 9 109 32 HOH HOH B . E 4 HOH 10 110 7 HOH HOH B . E 4 HOH 11 111 33 HOH HOH B . E 4 HOH 12 112 45 HOH HOH B . E 4 HOH 13 113 9 HOH HOH B . E 4 HOH 14 114 64 HOH HOH B . E 4 HOH 15 115 62 HOH HOH B . E 4 HOH 16 116 46 HOH HOH B . E 4 HOH 17 117 21 HOH HOH B . E 4 HOH 18 118 43 HOH HOH B . E 4 HOH 19 119 26 HOH HOH B . E 4 HOH 20 120 37 HOH HOH B . E 4 HOH 21 121 55 HOH HOH B . E 4 HOH 22 122 25 HOH HOH B . E 4 HOH 23 123 61 HOH HOH B . E 4 HOH 24 124 3 HOH HOH B . E 4 HOH 25 125 60 HOH HOH B . E 4 HOH 26 126 20 HOH HOH B . E 4 HOH 27 127 67 HOH HOH B . E 4 HOH 28 128 69 HOH HOH B . E 4 HOH 29 129 35 HOH HOH B . F 4 HOH 1 101 65 HOH HOH C . F 4 HOH 2 102 53 HOH HOH C . F 4 HOH 3 103 52 HOH HOH C . F 4 HOH 4 104 23 HOH HOH C . F 4 HOH 5 105 5 HOH HOH C . F 4 HOH 6 106 22 HOH HOH C . F 4 HOH 7 107 66 HOH HOH C . F 4 HOH 8 108 51 HOH HOH C . F 4 HOH 9 109 11 HOH HOH C . F 4 HOH 10 110 58 HOH HOH C . F 4 HOH 11 111 50 HOH HOH C . F 4 HOH 12 112 19 HOH HOH C . F 4 HOH 13 113 28 HOH HOH C . F 4 HOH 14 114 29 HOH HOH C . F 4 HOH 15 115 8 HOH HOH C . F 4 HOH 16 116 39 HOH HOH C . F 4 HOH 17 117 47 HOH HOH C . F 4 HOH 18 118 17 HOH HOH C . F 4 HOH 19 119 42 HOH HOH C . F 4 HOH 20 120 40 HOH HOH C . F 4 HOH 21 121 41 HOH HOH C . F 4 HOH 22 122 24 HOH HOH C . F 4 HOH 23 123 63 HOH HOH C . F 4 HOH 24 124 54 HOH HOH C . F 4 HOH 25 125 27 HOH HOH C . F 4 HOH 26 126 44 HOH HOH C . F 4 HOH 27 127 18 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5710 ? 1 MORE -19 ? 1 'SSA (A^2)' 6390 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 113 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-12 2 'Structure model' 1 1 2023-07-26 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -24.1033 12.0396 11.9115 0.3648 ? 0.0675 ? -0.0379 ? 0.4940 ? -0.2191 ? 0.5536 ? 0.7192 ? -0.8242 ? -0.6402 ? 0.9375 ? 0.7059 ? 0.5250 ? -0.4768 ? -0.2170 ? 1.3086 ? -0.2593 ? -0.1609 ? -0.6792 ? -1.0181 ? -0.1091 ? -0.0511 ? 2 'X-RAY DIFFRACTION' ? refined -2.9872 1.6196 6.0158 0.2690 ? 0.0158 ? -0.0157 ? 0.2315 ? 0.0180 ? 0.2123 ? 1.4400 ? 0.8219 ? 0.3293 ? 1.1597 ? 0.0749 ? 1.2229 ? 0.3211 ? -0.3457 ? -0.3582 ? 0.1081 ? -0.1021 ? -0.1426 ? -0.0676 ? 0.3857 ? -0.0510 ? 3 'X-RAY DIFFRACTION' ? refined 35.0951 -1.6506 7.9751 0.3373 ? -0.0010 ? -0.0518 ? 0.3132 ? 0.0008 ? 0.3200 ? 1.3951 ? 0.7880 ? -0.1101 ? 0.7352 ? 0.2712 ? 0.7624 ? -0.2213 ? -0.2803 ? -0.4667 ? 0.1937 ? 0.1414 ? 0.0833 ? -0.0010 ? -0.0122 ? -0.0282 ? 4 'X-RAY DIFFRACTION' ? refined -22.8339 10.9638 6.6538 0.4695 ? 0.0738 ? 0.0144 ? 0.5232 ? 0.2459 ? 0.7038 ? 3.1681 ? -0.1847 ? 0.7241 ? 0.2333 ? 0.2582 ? 0.5382 ? -0.3235 ? 0.6611 ? 0.3248 ? -0.6692 ? 0.7684 ? 1.7886 ? 0.1667 ? -0.7971 ? -0.0438 ? 5 'X-RAY DIFFRACTION' ? refined -5.4526 5.8522 9.6452 0.2535 ? 0.0095 ? 0.0255 ? 0.2649 ? -0.0103 ? 0.2680 ? 1.9181 ? 0.5077 ? 1.5821 ? 2.4931 ? -1.0672 ? 2.7867 ? 0.3180 ? -0.6191 ? 0.3991 ? -0.1483 ? -0.0825 ? 0.1429 ? -0.2399 ? -0.1521 ? -0.0325 ? 6 'X-RAY DIFFRACTION' ? refined 13.8605 -2.5666 6.3421 0.3943 ? 0.0248 ? -0.0028 ? 0.3338 ? -0.0668 ? 0.5259 ? 3.8709 ? -0.1157 ? 0.9493 ? 1.7809 ? -0.9297 ? 0.6735 ? 0.2341 ? 0.2752 ? -0.2238 ? 0.0358 ? 0.4279 ? -0.5043 ? 0.4186 ? 0.3411 ? -0.0108 ? 7 'X-RAY DIFFRACTION' ? refined 30.8553 -2.5479 4.5005 0.3426 ? 0.1033 ? 0.0387 ? 0.5916 ? 0.0749 ? 0.5386 ? 1.8395 ? 0.5200 ? 0.6217 ? 0.9499 ? -0.0797 ? 0.4987 ? 0.1550 ? 0.5116 ? -0.3438 ? -0.1441 ? -0.2817 ? -0.4413 ? 0.6326 ? 0.2909 ? -0.0348 ? 8 'X-RAY DIFFRACTION' ? refined 49.0772 -3.1025 6.0174 0.3068 ? 0.0120 ? 0.0178 ? 0.3297 ? 0.0110 ? 0.4339 ? 2.0387 ? 0.5621 ? 0.4625 ? 0.3078 ? 0.2184 ? 0.4063 ? -0.1147 ? 1.3511 ? -0.0462 ? -0.1912 ? 0.0734 ? -0.0939 ? 0.1301 ? -0.0446 ? -0.0160 ? 9 'X-RAY DIFFRACTION' ? refined -19.1076 6.1038 6.2708 0.2845 ? 0.0398 ? 0.0424 ? 0.2980 ? -0.0061 ? 0.2682 ? 4.1340 ? 0.5820 ? -0.1090 ? 0.3927 ? 0.1328 ? 0.1067 ? 0.0944 ? 0.1352 ? -0.7508 ? -0.1015 ? -0.5128 ? -0.1040 ? 0.3179 ? -0.0889 ? -0.0397 ? 10 'X-RAY DIFFRACTION' ? refined -2.3074 5.3563 3.8290 0.3165 ? 0.0275 ? 0.0650 ? 0.2727 ? -0.0214 ? 0.2783 ? 2.6894 ? -0.2305 ? 0.1464 ? 0.2095 ? -0.0859 ? 0.1451 ? -0.0081 ? 0.4415 ? 0.3439 ? 0.0772 ? 0.1108 ? -0.1456 ? -0.0040 ? -0.2284 ? -0.0465 ? 11 'X-RAY DIFFRACTION' ? refined 13.0424 3.3591 7.9495 0.4024 ? 0.0470 ? -0.0664 ? 0.4231 ? -0.1366 ? 0.2740 ? 3.5174 ? 0.5622 ? -0.4630 ? 0.5828 ? -0.3719 ? 0.2872 ? -0.3868 ? 0.0083 ? 0.5573 ? 0.7444 ? 0.6885 ? -0.1315 ? 0.2583 ? 0.8892 ? 0.0782 ? 12 'X-RAY DIFFRACTION' ? refined 28.6228 -3.7905 10.0002 0.3326 ? 0.0106 ? -0.0528 ? 0.4564 ? -0.0293 ? 0.4290 ? 2.8882 ? -0.0664 ? 0.2137 ? 0.2760 ? -0.2462 ? 0.3967 ? -0.5019 ? 0.2058 ? -0.8027 ? 0.7325 ? 0.3361 ? -0.2592 ? 0.2423 ? -0.2877 ? -0.0325 ? 13 'X-RAY DIFFRACTION' ? refined 46.6212 -7.4345 4.0069 0.5631 ? -0.0036 ? -0.0733 ? 0.6116 ? -0.1042 ? 0.5689 ? 2.2115 ? -0.7949 ? 0.3893 ? 0.6222 ? -0.0342 ? 1.0649 ? -0.5897 ? 0.9780 ? 0.0287 ? -0.3519 ? 0.1841 ? 1.0444 ? 0.2459 ? 0.2718 ? -0.0310 ? 14 'X-RAY DIFFRACTION' ? refined 58.6817 -9.9085 4.6338 0.3389 ? 1.3892 ? 0.0242 ? -0.1022 ? -1.1051 ? 1.0664 ? 2.0000 ? 2.0001 ? 1.9995 ? 2.0000 ? 2.0007 ? 1.9997 ? -0.7335 ? -3.5855 ? -0.1090 ? -3.9478 ? -0.3020 ? -0.0967 ? -1.2899 ? -1.4196 ? 1.1733 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? ? A 5 ? ? ;chain 'A' and (resid 1 through 5 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 6 ? ? ? A 16 ? ? ;chain 'A' and (resid 6 through 16 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 17 ? ? ? A 32 ? ? ;chain 'A' and (resid 17 through 32 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? B 1 ? ? ? B 5 ? ? ;chain 'B' and (resid 1 through 5 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? B 6 ? ? ? B 12 ? ? ;chain 'B' and (resid 6 through 12 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? B 14 ? ? ? B 18 ? ? ;chain 'B' and (resid 14 through 18 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? B 20 ? ? ? B 24 ? ? ;chain 'B' and (resid 20 through 24 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? B 25 ? ? ? B 32 ? ? ;chain 'B' and (resid 25 through 32 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? C 1 ? ? ? C 6 ? ? ;chain 'C' and (resid 1 through 6 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? C 7 ? ? ? C 11 ? ? ;chain 'C' and (resid 7 through 11 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? C 12 ? ? ? C 17 ? ? ;chain 'C' and (resid 12 through 17 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? C 18 ? ? ? C 23 ? ? ;chain 'C' and (resid 18 through 23 ) ; 13 'X-RAY DIFFRACTION' 13 ? ? C 24 ? ? ? C 30 ? ? ;chain 'C' and (resid 24 through 30 ) ; 14 'X-RAY DIFFRACTION' 14 ? ? C 31 ? ? ? C 31 ? ? ;chain 'C' and (resid 31 through 31 ) ; # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? HKL-2000 ? ? package . 1 ? 'data scaling' ? ? 'Zbyszek Otwinowski' hkl@hkl-xray.com ? ? ? ? ? http://www.hkl-xray.com/ ? HKL-2000 ? ? package . 2 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 3 ? refinement ? ? 'Paul D. Adams' PDAdams@lbl.gov ? ? ? ? C++ http://www.phenix-online.org/ ? PHENIX ? ? package 1.20.1_4487 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Oct. 31, 2020' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.27 5 # _pdbx_entry_details.entry_id 8H0E _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ C LYS 13 ? ? O C HOH 101 ? ? 1.89 2 1 N C ALA 31 ? ? O C HOH 102 ? ? 2.04 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HYP _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 28 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -12.74 _pdbx_validate_torsion.psi 126.45 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASP N N N N 14 ASP CA C N S 15 ASP C C N N 16 ASP O O N N 17 ASP CB C N N 18 ASP CG C N N 19 ASP OD1 O N N 20 ASP OD2 O N N 21 ASP OXT O N N 22 ASP H H N N 23 ASP H2 H N N 24 ASP HA H N N 25 ASP HB2 H N N 26 ASP HB3 H N N 27 ASP HD2 H N N 28 ASP HXT H N N 29 GLU N N N N 30 GLU CA C N S 31 GLU C C N N 32 GLU O O N N 33 GLU CB C N N 34 GLU CG C N N 35 GLU CD C N N 36 GLU OE1 O N N 37 GLU OE2 O N N 38 GLU OXT O N N 39 GLU H H N N 40 GLU H2 H N N 41 GLU HA H N N 42 GLU HB2 H N N 43 GLU HB3 H N N 44 GLU HG2 H N N 45 GLU HG3 H N N 46 GLU HE2 H N N 47 GLU HXT H N N 48 GLY N N N N 49 GLY CA C N N 50 GLY C C N N 51 GLY O O N N 52 GLY OXT O N N 53 GLY H H N N 54 GLY H2 H N N 55 GLY HA2 H N N 56 GLY HA3 H N N 57 GLY HXT H N N 58 HOH O O N N 59 HOH H1 H N N 60 HOH H2 H N N 61 HYP N N N N 62 HYP CA C N S 63 HYP C C N N 64 HYP O O N N 65 HYP CB C N N 66 HYP CG C N R 67 HYP CD C N N 68 HYP OD1 O N N 69 HYP OXT O N N 70 HYP H H N N 71 HYP HA H N N 72 HYP HB2 H N N 73 HYP HB3 H N N 74 HYP HG H N N 75 HYP HD22 H N N 76 HYP HD23 H N N 77 HYP HD1 H N N 78 HYP HXT H N N 79 LYS N N N N 80 LYS CA C N S 81 LYS C C N N 82 LYS O O N N 83 LYS CB C N N 84 LYS CG C N N 85 LYS CD C N N 86 LYS CE C N N 87 LYS NZ N N N 88 LYS OXT O N N 89 LYS H H N N 90 LYS H2 H N N 91 LYS HA H N N 92 LYS HB2 H N N 93 LYS HB3 H N N 94 LYS HG2 H N N 95 LYS HG3 H N N 96 LYS HD2 H N N 97 LYS HD3 H N N 98 LYS HE2 H N N 99 LYS HE3 H N N 100 LYS HZ1 H N N 101 LYS HZ2 H N N 102 LYS HZ3 H N N 103 LYS HXT H N N 104 PRO N N N N 105 PRO CA C N S 106 PRO C C N N 107 PRO O O N N 108 PRO CB C N N 109 PRO CG C N N 110 PRO CD C N N 111 PRO OXT O N N 112 PRO H H N N 113 PRO HA H N N 114 PRO HB2 H N N 115 PRO HB3 H N N 116 PRO HG2 H N N 117 PRO HG3 H N N 118 PRO HD2 H N N 119 PRO HD3 H N N 120 PRO HXT H N N 121 TYR N N N N 122 TYR CA C N S 123 TYR C C N N 124 TYR O O N N 125 TYR CB C N N 126 TYR CG C Y N 127 TYR CD1 C Y N 128 TYR CD2 C Y N 129 TYR CE1 C Y N 130 TYR CE2 C Y N 131 TYR CZ C Y N 132 TYR OH O N N 133 TYR OXT O N N 134 TYR H H N N 135 TYR H2 H N N 136 TYR HA H N N 137 TYR HB2 H N N 138 TYR HB3 H N N 139 TYR HD1 H N N 140 TYR HD2 H N N 141 TYR HE1 H N N 142 TYR HE2 H N N 143 TYR HH H N N 144 TYR HXT H N N 145 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASP N CA sing N N 13 ASP N H sing N N 14 ASP N H2 sing N N 15 ASP CA C sing N N 16 ASP CA CB sing N N 17 ASP CA HA sing N N 18 ASP C O doub N N 19 ASP C OXT sing N N 20 ASP CB CG sing N N 21 ASP CB HB2 sing N N 22 ASP CB HB3 sing N N 23 ASP CG OD1 doub N N 24 ASP CG OD2 sing N N 25 ASP OD2 HD2 sing N N 26 ASP OXT HXT sing N N 27 GLU N CA sing N N 28 GLU N H sing N N 29 GLU N H2 sing N N 30 GLU CA C sing N N 31 GLU CA CB sing N N 32 GLU CA HA sing N N 33 GLU C O doub N N 34 GLU C OXT sing N N 35 GLU CB CG sing N N 36 GLU CB HB2 sing N N 37 GLU CB HB3 sing N N 38 GLU CG CD sing N N 39 GLU CG HG2 sing N N 40 GLU CG HG3 sing N N 41 GLU CD OE1 doub N N 42 GLU CD OE2 sing N N 43 GLU OE2 HE2 sing N N 44 GLU OXT HXT sing N N 45 GLY N CA sing N N 46 GLY N H sing N N 47 GLY N H2 sing N N 48 GLY CA C sing N N 49 GLY CA HA2 sing N N 50 GLY CA HA3 sing N N 51 GLY C O doub N N 52 GLY C OXT sing N N 53 GLY OXT HXT sing N N 54 HOH O H1 sing N N 55 HOH O H2 sing N N 56 HYP N CA sing N N 57 HYP N CD sing N N 58 HYP N H sing N N 59 HYP CA C sing N N 60 HYP CA CB sing N N 61 HYP CA HA sing N N 62 HYP C O doub N N 63 HYP C OXT sing N N 64 HYP CB CG sing N N 65 HYP CB HB2 sing N N 66 HYP CB HB3 sing N N 67 HYP CG CD sing N N 68 HYP CG OD1 sing N N 69 HYP CG HG sing N N 70 HYP CD HD22 sing N N 71 HYP CD HD23 sing N N 72 HYP OD1 HD1 sing N N 73 HYP OXT HXT sing N N 74 LYS N CA sing N N 75 LYS N H sing N N 76 LYS N H2 sing N N 77 LYS CA C sing N N 78 LYS CA CB sing N N 79 LYS CA HA sing N N 80 LYS C O doub N N 81 LYS C OXT sing N N 82 LYS CB CG sing N N 83 LYS CB HB2 sing N N 84 LYS CB HB3 sing N N 85 LYS CG CD sing N N 86 LYS CG HG2 sing N N 87 LYS CG HG3 sing N N 88 LYS CD CE sing N N 89 LYS CD HD2 sing N N 90 LYS CD HD3 sing N N 91 LYS CE NZ sing N N 92 LYS CE HE2 sing N N 93 LYS CE HE3 sing N N 94 LYS NZ HZ1 sing N N 95 LYS NZ HZ2 sing N N 96 LYS NZ HZ3 sing N N 97 LYS OXT HXT sing N N 98 PRO N CA sing N N 99 PRO N CD sing N N 100 PRO N H sing N N 101 PRO CA C sing N N 102 PRO CA CB sing N N 103 PRO CA HA sing N N 104 PRO C O doub N N 105 PRO C OXT sing N N 106 PRO CB CG sing N N 107 PRO CB HB2 sing N N 108 PRO CB HB3 sing N N 109 PRO CG CD sing N N 110 PRO CG HG2 sing N N 111 PRO CG HG3 sing N N 112 PRO CD HD2 sing N N 113 PRO CD HD3 sing N N 114 PRO OXT HXT sing N N 115 TYR N CA sing N N 116 TYR N H sing N N 117 TYR N H2 sing N N 118 TYR CA C sing N N 119 TYR CA CB sing N N 120 TYR CA HA sing N N 121 TYR C O doub N N 122 TYR C OXT sing N N 123 TYR CB CG sing N N 124 TYR CB HB2 sing N N 125 TYR CB HB3 sing N N 126 TYR CG CD1 doub Y N 127 TYR CG CD2 sing Y N 128 TYR CD1 CE1 sing Y N 129 TYR CD1 HD1 sing N N 130 TYR CD2 CE2 doub Y N 131 TYR CD2 HD2 sing N N 132 TYR CE1 CZ doub Y N 133 TYR CE1 HE1 sing N N 134 TYR CE2 CZ sing Y N 135 TYR CE2 HE2 sing N N 136 TYR CZ OH sing N N 137 TYR OH HH sing N N 138 TYR OXT HXT sing N N 139 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HYP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HYP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5YAN _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #