HEADER SIGNALING PROTEIN/INHIBITOR 12-OCT-22 8H59 TITLE A FUNGAL MAP KINASE IN COMPLEX WITH AN INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE MPS1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAPK MPS1; COMPND 5 EC: 2.7.11.24; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYRICULARIA ORYZAE 70-15; SOURCE 3 ORGANISM_TAXID: 242507; SOURCE 4 STRAIN: 70-15; SOURCE 5 GENE: MPS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, FUNGAL, SIGNALING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Z.KONG,X.ZHANG,D.WANG,J.LIU REVDAT 4 29-NOV-23 8H59 1 REMARK REVDAT 3 10-MAY-23 8H59 1 JRNL REVDAT 2 01-MAR-23 8H59 1 JRNL REVDAT 1 08-FEB-23 8H59 0 JRNL AUTH Z.KONG,X.ZHANG,F.ZHOU,L.TANG,Y.CHEN,S.LI,X.ZHANG,L.KUAI, JRNL AUTH 2 W.SU,W.CUI,J.CAI,Y.WANG,J.YANG,Y.L.PENG,D.WANG,J.LIU JRNL TITL STRUCTURE-AIDED IDENTIFICATION OF AN INHIBITOR TARGETS MPS1 JRNL TITL 2 FOR THE MANAGEMENT OF PLANT-PATHOGENIC FUNGI. JRNL REF MBIO V. 14 88322 2023 JRNL REFN ESSN 2150-7511 JRNL PMID 36779710 JRNL DOI 10.1128/MBIO.02883-22 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 28260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 1394 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0800 - 4.6300 0.99 2891 168 0.1725 0.1969 REMARK 3 2 4.6300 - 3.6800 1.00 2793 149 0.1519 0.1682 REMARK 3 3 3.6700 - 3.2100 0.99 2771 119 0.1750 0.2074 REMARK 3 4 3.2100 - 2.9200 0.99 2753 126 0.2037 0.2376 REMARK 3 5 2.9200 - 2.7100 0.98 2680 124 0.1885 0.2390 REMARK 3 6 2.7100 - 2.5500 0.98 2673 132 0.2045 0.2116 REMARK 3 7 2.5500 - 2.4200 0.97 2604 147 0.1841 0.2038 REMARK 3 8 2.4200 - 2.3200 0.96 2602 152 0.1935 0.2355 REMARK 3 9 2.3200 - 2.2300 0.96 2610 122 0.1784 0.2034 REMARK 3 10 2.2300 - 2.1500 0.93 2489 155 0.2018 0.2469 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.2166 -34.9881 15.6731 REMARK 3 T TENSOR REMARK 3 T11: 0.4705 T22: 0.6821 REMARK 3 T33: 0.4670 T12: 0.0723 REMARK 3 T13: 0.0107 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.5600 L22: 0.3983 REMARK 3 L33: 0.5199 L12: 0.3385 REMARK 3 L13: -0.1020 L23: 0.1999 REMARK 3 S TENSOR REMARK 3 S11: 0.0502 S12: 0.7287 S13: -0.1131 REMARK 3 S21: -0.3929 S22: -0.1330 S23: -0.2669 REMARK 3 S31: 0.1827 S32: 0.4871 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0072 -40.7581 24.1634 REMARK 3 T TENSOR REMARK 3 T11: 0.3609 T22: 0.4436 REMARK 3 T33: 0.4148 T12: 0.0275 REMARK 3 T13: -0.0490 T23: -0.0525 REMARK 3 L TENSOR REMARK 3 L11: 0.9016 L22: 0.4793 REMARK 3 L33: 0.9871 L12: -0.0584 REMARK 3 L13: 0.9810 L23: 0.1491 REMARK 3 S TENSOR REMARK 3 S11: 0.1201 S12: 0.1310 S13: -0.3279 REMARK 3 S21: -0.2811 S22: -0.0676 S23: 0.3106 REMARK 3 S31: 0.0192 S32: -0.0127 S33: 0.0003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7398 -36.0682 23.6348 REMARK 3 T TENSOR REMARK 3 T11: 0.3463 T22: 0.4699 REMARK 3 T33: 0.3774 T12: 0.0532 REMARK 3 T13: -0.0323 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 1.0603 L22: 0.5690 REMARK 3 L33: 0.2897 L12: -0.3466 REMARK 3 L13: 0.5671 L23: -0.4393 REMARK 3 S TENSOR REMARK 3 S11: 0.0765 S12: 0.2116 S13: -0.0113 REMARK 3 S21: -0.0633 S22: -0.0250 S23: 0.0285 REMARK 3 S31: 0.1463 S32: 0.3009 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.9207 -33.3998 38.9411 REMARK 3 T TENSOR REMARK 3 T11: 0.1981 T22: 0.2995 REMARK 3 T33: 0.2734 T12: 0.0164 REMARK 3 T13: 0.0024 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.3854 L22: 0.8162 REMARK 3 L33: 1.3945 L12: 0.1131 REMARK 3 L13: 0.0504 L23: 0.0812 REMARK 3 S TENSOR REMARK 3 S11: 0.0479 S12: -0.0182 S13: 0.1147 REMARK 3 S21: 0.0680 S22: 0.0473 S23: 0.0398 REMARK 3 S31: -0.0991 S32: 0.0320 S33: -0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 166 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.7599 -49.9541 39.8998 REMARK 3 T TENSOR REMARK 3 T11: 0.3700 T22: 0.4177 REMARK 3 T33: 0.5718 T12: -0.0645 REMARK 3 T13: -0.0897 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 0.5628 L22: 0.0788 REMARK 3 L33: 0.7633 L12: -0.1487 REMARK 3 L13: 0.4103 L23: 0.1287 REMARK 3 S TENSOR REMARK 3 S11: 0.2697 S12: -0.1114 S13: -0.3330 REMARK 3 S21: -0.2108 S22: -0.1185 S23: 0.2448 REMARK 3 S31: 0.3760 S32: -0.0165 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 224 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.8092 -47.6324 47.4947 REMARK 3 T TENSOR REMARK 3 T11: 0.2846 T22: 0.3766 REMARK 3 T33: 0.3636 T12: 0.0176 REMARK 3 T13: -0.0261 T23: 0.0520 REMARK 3 L TENSOR REMARK 3 L11: 0.1011 L22: 0.4657 REMARK 3 L33: 0.5884 L12: -0.1796 REMARK 3 L13: 0.1275 L23: -0.5730 REMARK 3 S TENSOR REMARK 3 S11: 0.0769 S12: -0.3364 S13: -0.0139 REMARK 3 S21: 0.1555 S22: 0.0031 S23: -0.0491 REMARK 3 S31: 0.0831 S32: -0.0085 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.1058 -51.9642 48.4853 REMARK 3 T TENSOR REMARK 3 T11: 0.4303 T22: 0.4581 REMARK 3 T33: 0.4105 T12: 0.0609 REMARK 3 T13: -0.0673 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 0.4262 L22: 0.5091 REMARK 3 L33: 0.2452 L12: -0.4981 REMARK 3 L13: -0.3577 L23: 0.1548 REMARK 3 S TENSOR REMARK 3 S11: 0.0895 S12: 0.1037 S13: -0.0062 REMARK 3 S21: -0.3672 S22: -0.1347 S23: -0.3311 REMARK 3 S31: 0.2977 S32: 0.4656 S33: 0.0009 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.6395 -50.1731 58.0986 REMARK 3 T TENSOR REMARK 3 T11: 0.4350 T22: 0.4795 REMARK 3 T33: 0.3958 T12: 0.0063 REMARK 3 T13: -0.0068 T23: 0.0521 REMARK 3 L TENSOR REMARK 3 L11: 1.2425 L22: 0.7690 REMARK 3 L33: 0.8393 L12: -1.0384 REMARK 3 L13: 0.3847 L23: -0.4867 REMARK 3 S TENSOR REMARK 3 S11: -0.1318 S12: -0.3350 S13: -0.1494 REMARK 3 S21: 0.4743 S22: 0.2920 S23: 0.1306 REMARK 3 S31: 0.1358 S32: -0.2465 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1221 -35.7394 45.4437 REMARK 3 T TENSOR REMARK 3 T11: 0.3320 T22: 0.4778 REMARK 3 T33: 0.4030 T12: 0.0112 REMARK 3 T13: 0.0235 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 0.5053 L22: 0.5462 REMARK 3 L33: 1.1717 L12: -0.7523 REMARK 3 L13: 0.8562 L23: -0.6718 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: -0.3612 S13: 0.1313 REMARK 3 S21: 0.1461 S22: -0.0340 S23: 0.3171 REMARK 3 S31: 0.1750 S32: -0.3744 S33: -0.0019 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7441 -22.9026 31.5921 REMARK 3 T TENSOR REMARK 3 T11: 0.4204 T22: 0.4134 REMARK 3 T33: 0.3810 T12: -0.0041 REMARK 3 T13: -0.0652 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.4126 L22: 0.0592 REMARK 3 L33: 0.4356 L12: -0.2411 REMARK 3 L13: 0.0033 L23: 0.6164 REMARK 3 S TENSOR REMARK 3 S11: 0.1296 S12: 0.2789 S13: 0.1074 REMARK 3 S21: 0.1713 S22: -0.2581 S23: -0.1540 REMARK 3 S31: -0.0030 S32: -0.2933 S33: -0.0010 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H59 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1300032834. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29013 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.40 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.40 REMARK 200 R MERGE FOR SHELL (I) : 0.91400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5Z33 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%% (V/V) TACSIMATE, PH 6.0, 0.05 M REMARK 280 SODIUM CACODYLATE TRIHYDRATE, PH 6.5, AND 1.0 MM SPERMINE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.03867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.01933 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.01933 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.03867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 361 REMARK 465 PRO A 362 REMARK 465 GLY A 363 REMARK 465 ALA A 364 REMARK 465 GLY A 365 REMARK 465 GLY A 366 REMARK 465 HIS A 367 REMARK 465 GLY A 368 REMARK 465 ALA A 369 REMARK 465 PRO A 370 REMARK 465 HIS A 371 REMARK 465 ALA A 372 REMARK 465 PRO A 373 REMARK 465 GLN A 374 REMARK 465 VAL A 375 REMARK 465 PRO A 376 REMARK 465 ILE A 377 REMARK 465 PRO A 378 REMARK 465 ALA A 379 REMARK 465 GLY A 380 REMARK 465 ALA A 381 REMARK 465 GLY A 382 REMARK 465 GLN A 383 REMARK 465 GLY A 384 REMARK 465 GLN A 385 REMARK 465 TRP A 386 REMARK 465 LYS A 387 REMARK 465 ALA A 388 REMARK 465 GLU A 389 REMARK 465 ASP A 390 REMARK 465 PRO A 391 REMARK 465 ARG A 392 REMARK 465 PRO A 393 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 322 O HOH A 601 2.00 REMARK 500 OD2 ASP A 110 O HOH A 602 2.08 REMARK 500 O PHE A 203 O HOH A 603 2.15 REMARK 500 O HOH A 635 O HOH A 736 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 710 O HOH A 738 5545 1.69 REMARK 500 OG SER A 258 OE1 GLU A 406 1545 1.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 95 -72.57 -55.06 REMARK 500 ARG A 148 -13.71 79.73 REMARK 500 ASP A 167 86.10 70.85 REMARK 500 GLN A 204 6.91 58.26 REMARK 500 LYS A 230 59.78 -104.56 REMARK 500 REMARK 500 REMARK: NULL DBREF 8H59 A 5 412 UNP G4N374 MPS1_MAGO7 5 412 SEQRES 1 A 408 GLN GLY ARG LYS ILE PHE LYS VAL PHE ASN GLN ASP PHE SEQRES 2 A 408 ILE VAL ASP GLU ARG TYR THR VAL THR LYS GLU LEU GLY SEQRES 3 A 408 GLN GLY ALA TYR GLY ILE VAL CYS ALA ALA VAL ASN ASN SEQRES 4 A 408 GLN THR SER GLU GLY VAL ALA ILE LYS LYS VAL THR ASN SEQRES 5 A 408 VAL PHE SER LYS LYS ILE LEU ALA LYS ARG ALA LEU ARG SEQRES 6 A 408 GLU ILE LYS LEU LEU GLN HIS PHE ARG GLY HIS ARG ASN SEQRES 7 A 408 ILE THR CYS LEU TYR ASP MET ASP ILE PRO ARG PRO ASP SEQRES 8 A 408 ASN PHE ASN GLU THR TYR LEU TYR GLU GLU LEU MET GLU SEQRES 9 A 408 CYS ASP LEU ALA ALA ILE ILE ARG SER GLY GLN PRO LEU SEQRES 10 A 408 THR ASP ALA HIS PHE GLN SER PHE ILE TYR GLN ILE LEU SEQRES 11 A 408 CYS GLY LEU LYS TYR ILE HIS SER ALA ASN VAL LEU HIS SEQRES 12 A 408 ARG ASP LEU LYS PRO GLY ASN LEU LEU VAL ASN ALA ASP SEQRES 13 A 408 CYS GLU LEU LYS ILE CYS ASP PHE GLY LEU ALA ARG GLY SEQRES 14 A 408 PHE SER VAL ASP PRO GLU GLU ASN ALA GLY TYR MET THR SEQRES 15 A 408 GLU TYR VAL ALA THR ARG TRP TYR ARG ALA PRO GLU ILE SEQRES 16 A 408 MET LEU SER PHE GLN SER TYR THR LYS ALA ILE ASP VAL SEQRES 17 A 408 TRP SER VAL GLY CYS ILE LEU ALA GLU LEU LEU GLY GLY SEQRES 18 A 408 ARG PRO PHE PHE LYS GLY ARG ASP TYR VAL ASP GLN LEU SEQRES 19 A 408 ASN GLN ILE LEU HIS ILE LEU GLY THR PRO ASN GLU GLU SEQRES 20 A 408 THR LEU SER ARG ILE GLY SER PRO ARG ALA GLN GLU TYR SEQRES 21 A 408 VAL ARG ASN LEU PRO PHE MET ALA LYS LYS PRO PHE PRO SEQRES 22 A 408 THR LEU PHE PRO ASN ALA ASN PRO ASP ALA LEU ASP LEU SEQRES 23 A 408 LEU ASP ARG MET LEU ALA PHE ASP PRO SER SER ARG ILE SEQRES 24 A 408 SER VAL GLU GLN ALA LEU GLU HIS PRO TYR LEU HIS ILE SEQRES 25 A 408 TRP HIS ASP ALA SER ASP GLU PRO ASP CYS PRO THR THR SEQRES 26 A 408 PHE ASN PHE ASP PHE GLU VAL VAL GLU ASP VAL GLY GLU SEQRES 27 A 408 MET ARG LYS MET ILE LEU ASP GLU VAL TYR ARG PHE ARG SEQRES 28 A 408 GLN LEU VAL ARG THR ALA PRO GLY ALA GLY GLY HIS GLY SEQRES 29 A 408 ALA PRO HIS ALA PRO GLN VAL PRO ILE PRO ALA GLY ALA SEQRES 30 A 408 GLY GLN GLY GLN TRP LYS ALA GLU ASP PRO ARG PRO GLN SEQRES 31 A 408 GLU TYR VAL GLY GLN MET ASN ASP LEU GLU ALA GLU LEU SEQRES 32 A 408 ALA GLY GLY LEU ASP HET KR9 A 501 65 HETNAM KR9 ~{N}-[(2~{S})-3-(1~{H}-INDOL-3-YL)-1-(METHYLAMINO)-1- HETNAM 2 KR9 OXIDANYLIDENE-PROPAN-2-YL]-8-[2-METHOXY-5- HETNAM 3 KR9 (TRIFLUOROMETHYLOXY)PHENYL]-1,6-NAPHTHYRIDINE-2- HETNAM 4 KR9 CARBOXAMIDE FORMUL 2 KR9 C29 H24 F3 N5 O4 FORMUL 3 HOH *146(H2 O) HELIX 1 AA1 LYS A 60 PHE A 77 1 18 HELIX 2 AA2 LEU A 111 GLY A 118 1 8 HELIX 3 AA3 THR A 122 ALA A 143 1 22 HELIX 4 AA4 LYS A 151 GLY A 153 5 3 HELIX 5 AA5 ASP A 177 TYR A 184 1 8 HELIX 6 AA6 THR A 191 ARG A 195 5 5 HELIX 7 AA7 ALA A 196 LEU A 201 1 6 HELIX 8 AA8 LYS A 208 GLY A 225 1 18 HELIX 9 AA9 ASP A 233 GLY A 246 1 14 HELIX 10 AB1 ASN A 249 ARG A 255 1 7 HELIX 11 AB2 SER A 258 LEU A 268 1 11 HELIX 12 AB3 PRO A 275 PHE A 280 1 6 HELIX 13 AB4 ASN A 284 LEU A 295 1 12 HELIX 14 AB5 ASP A 298 ARG A 302 5 5 HELIX 15 AB6 SER A 304 GLU A 310 1 7 HELIX 16 AB7 HIS A 311 HIS A 315 5 5 HELIX 17 AB8 ASP A 319 GLU A 323 5 5 HELIX 18 AB9 PHE A 332 VAL A 337 5 6 HELIX 19 AC1 ASP A 339 ARG A 359 1 21 HELIX 20 AC2 GLU A 395 GLY A 409 1 15 SHEET 1 AA1 2 ARG A 7 VAL A 12 0 SHEET 2 AA1 2 GLN A 15 ASP A 20 -1 O PHE A 17 N PHE A 10 SHEET 1 AA2 5 TYR A 23 GLY A 32 0 SHEET 2 AA2 5 GLY A 35 ASN A 42 -1 O VAL A 37 N GLY A 30 SHEET 3 AA2 5 GLY A 48 VAL A 54 -1 O ILE A 51 N CYS A 38 SHEET 4 AA2 5 THR A 100 GLU A 105 -1 O GLU A 104 N ALA A 50 SHEET 5 AA2 5 LEU A 86 ASP A 90 -1 N TYR A 87 O TYR A 103 SHEET 1 AA3 3 CYS A 109 ASP A 110 0 SHEET 2 AA3 3 LEU A 155 VAL A 157 -1 O VAL A 157 N CYS A 109 SHEET 3 AA3 3 LEU A 163 ILE A 165 -1 O LYS A 164 N LEU A 156 SHEET 1 AA4 2 VAL A 145 LEU A 146 0 SHEET 2 AA4 2 ARG A 172 GLY A 173 -1 O ARG A 172 N LEU A 146 CRYST1 75.040 75.040 159.058 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013326 0.007694 0.000000 0.00000 SCALE2 0.000000 0.015388 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006287 0.00000