HEADER ISOMERASE 13-OCT-22 8H5S TITLE CRYSTAL STRUCTURE OF RV3400 FROM MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 STRAIN: ATCC 25618 / H37RV; SOURCE 5 ATCC: 25618; SOURCE 6 GENE: RV3400, MTCY78.28C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET DUET; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET DUETN-RV3400 KEYWDS BETA-PHOSPHOGLUCOMUTASE, HALOACID DEHALOGENASE FAMILY PROTEIN, KEYWDS 2 CRYSTAL, G1P, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.SINGH,S.KARTHIKEYAN,K.G.THAKUR REVDAT 3 15-MAY-24 8H5S 1 JRNL REVDAT 2 15-NOV-23 8H5S 1 REMARK REVDAT 1 25-OCT-23 8H5S 0 JRNL AUTH L.SINGH,S.KARTHIKEYAN,K.G.THAKUR JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION REVEALS RV3400 JRNL TITL 2 CODES FOR BETA-PHOSPHOGLUCOMUTASE IN MYCOBACTERIUM JRNL TITL 3 TUBERCULOSIS. JRNL REF PROTEIN SCI. V. 33 E4943 2024 JRNL REFN ESSN 1469-896X JRNL PMID 38501428 JRNL DOI 10.1002/PRO.4943 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.0 REMARK 3 NUMBER OF REFLECTIONS : 85775 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 4163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3400 - 5.2700 0.99 2868 135 0.1451 0.1403 REMARK 3 2 5.2700 - 4.1900 1.00 2854 142 0.1211 0.1364 REMARK 3 3 4.1900 - 3.6600 1.00 2888 130 0.1220 0.1267 REMARK 3 4 3.6600 - 3.3300 1.00 2844 166 0.1353 0.1757 REMARK 3 5 3.3200 - 3.0900 1.00 2872 128 0.1508 0.1560 REMARK 3 6 3.0900 - 2.9100 1.00 2873 138 0.1614 0.1911 REMARK 3 7 2.9100 - 2.7600 1.00 2895 117 0.1637 0.2092 REMARK 3 8 2.7600 - 2.6400 1.00 2886 136 0.1744 0.1755 REMARK 3 9 2.6400 - 2.5400 1.00 2852 153 0.1601 0.1883 REMARK 3 10 2.5400 - 2.4500 1.00 2827 178 0.1704 0.1928 REMARK 3 11 2.4500 - 2.3700 1.00 2828 164 0.1518 0.1813 REMARK 3 12 2.3700 - 2.3100 1.00 2846 176 0.1530 0.1566 REMARK 3 13 2.3100 - 2.2500 1.00 2858 165 0.1399 0.1635 REMARK 3 14 2.2500 - 2.1900 1.00 2856 118 0.1447 0.1511 REMARK 3 15 2.1900 - 2.1400 1.00 2877 122 0.1460 0.1838 REMARK 3 16 2.1400 - 2.1000 1.00 2887 153 0.1618 0.1925 REMARK 3 17 2.1000 - 2.0500 1.00 2841 147 0.1515 0.1397 REMARK 3 18 2.0500 - 2.0100 1.00 2847 148 0.1556 0.2013 REMARK 3 19 2.0100 - 1.9800 1.00 2875 127 0.1560 0.1902 REMARK 3 20 1.9800 - 1.9500 1.00 2859 185 0.1646 0.1840 REMARK 3 21 1.9500 - 1.9100 1.00 2832 136 0.1773 0.2227 REMARK 3 22 1.9100 - 1.8800 0.99 2902 132 0.1921 0.2254 REMARK 3 23 1.8800 - 1.8600 0.98 2785 130 0.2011 0.1730 REMARK 3 24 1.8600 - 1.8300 0.94 2746 124 0.2220 0.2367 REMARK 3 25 1.8300 - 1.8100 0.90 2550 126 0.2194 0.2276 REMARK 3 26 1.8100 - 1.7800 0.86 2441 131 0.2522 0.2539 REMARK 3 27 1.7800 - 1.7600 0.82 2359 124 0.2293 0.2054 REMARK 3 28 1.7600 - 1.7400 0.74 2121 126 0.2464 0.3049 REMARK 3 29 1.7400 - 1.7200 0.69 1970 108 0.2627 0.2669 REMARK 3 30 1.7200 - 1.7000 0.59 1673 98 0.2869 0.3043 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.165 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.517 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1969 REMARK 3 ANGLE : 0.758 2680 REMARK 3 CHIRALITY : 0.053 303 REMARK 3 PLANARITY : 0.007 363 REMARK 3 DIHEDRAL : 11.781 725 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2362 39.6495 45.7781 REMARK 3 T TENSOR REMARK 3 T11: 0.1555 T22: 0.1670 REMARK 3 T33: 0.1477 T12: 0.0003 REMARK 3 T13: -0.0009 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 2.7115 L22: 5.5204 REMARK 3 L33: 4.0609 L12: -2.5796 REMARK 3 L13: -1.1548 L23: 0.7997 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.0392 S13: 0.2615 REMARK 3 S21: 0.1176 S22: 0.0399 S23: 0.1752 REMARK 3 S31: -0.1291 S32: -0.2669 S33: -0.0181 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9812 33.6057 23.7802 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1428 REMARK 3 T33: 0.1945 T12: -0.0232 REMARK 3 T13: 0.0027 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 3.1583 L22: 0.7597 REMARK 3 L33: 5.5179 L12: -1.0839 REMARK 3 L13: -2.7226 L23: 1.0546 REMARK 3 S TENSOR REMARK 3 S11: 0.0188 S12: -0.0112 S13: 0.0575 REMARK 3 S21: -0.0148 S22: 0.0298 S23: -0.0334 REMARK 3 S31: -0.0572 S32: 0.2215 S33: -0.0587 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3286 25.4307 20.5928 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.1793 REMARK 3 T33: 0.1647 T12: 0.0066 REMARK 3 T13: -0.0190 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 2.1232 L22: 3.5154 REMARK 3 L33: 3.0888 L12: 1.0543 REMARK 3 L13: -0.3242 L23: -1.8687 REMARK 3 S TENSOR REMARK 3 S11: 0.0768 S12: 0.0659 S13: -0.0416 REMARK 3 S21: -0.2116 S22: -0.0089 S23: 0.1677 REMARK 3 S31: 0.2612 S32: -0.0057 S33: -0.0756 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.3202 24.2616 32.3977 REMARK 3 T TENSOR REMARK 3 T11: 0.2519 T22: 0.1752 REMARK 3 T33: 0.2301 T12: 0.0511 REMARK 3 T13: -0.0316 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 8.2690 L22: 6.1679 REMARK 3 L33: 4.4766 L12: 0.5775 REMARK 3 L13: 1.8931 L23: 0.2520 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: -0.4990 S13: 0.2215 REMARK 3 S21: 0.7077 S22: 0.0866 S23: -0.5907 REMARK 3 S31: 0.2478 S32: 0.2705 S33: -0.0885 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 146 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9647 38.6842 51.8778 REMARK 3 T TENSOR REMARK 3 T11: 0.2119 T22: 0.1979 REMARK 3 T33: 0.1908 T12: 0.0357 REMARK 3 T13: -0.0541 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.7383 L22: 4.5178 REMARK 3 L33: 8.6000 L12: -1.0494 REMARK 3 L13: -5.3107 L23: 2.4448 REMARK 3 S TENSOR REMARK 3 S11: -0.2303 S12: -0.5556 S13: -0.1338 REMARK 3 S21: 0.3521 S22: 0.3063 S23: -0.4053 REMARK 3 S31: 0.3072 S32: 0.6909 S33: -0.0225 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 147 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2753 29.1312 45.3966 REMARK 3 T TENSOR REMARK 3 T11: 0.2134 T22: 0.1460 REMARK 3 T33: 0.2183 T12: -0.0029 REMARK 3 T13: 0.0024 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.7386 L22: 1.2174 REMARK 3 L33: 7.0996 L12: -0.7012 REMARK 3 L13: -2.7293 L23: 1.7164 REMARK 3 S TENSOR REMARK 3 S11: -0.0946 S12: 0.0806 S13: -0.2574 REMARK 3 S21: 0.1592 S22: -0.0170 S23: -0.0590 REMARK 3 S31: 0.5059 S32: 0.1842 S33: 0.0895 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6352 26.7037 40.5010 REMARK 3 T TENSOR REMARK 3 T11: 0.2113 T22: 0.1638 REMARK 3 T33: 0.2067 T12: -0.0125 REMARK 3 T13: 0.0231 T23: 0.0205 REMARK 3 L TENSOR REMARK 3 L11: 2.3366 L22: 3.1881 REMARK 3 L33: 6.5229 L12: 0.1533 REMARK 3 L13: 1.5230 L23: -0.3716 REMARK 3 S TENSOR REMARK 3 S11: 0.0573 S12: -0.0945 S13: -0.2514 REMARK 3 S21: 0.0361 S22: -0.0213 S23: -0.0314 REMARK 3 S31: 0.8410 S32: 0.0198 S33: -0.0515 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6592 30.7378 39.9027 REMARK 3 T TENSOR REMARK 3 T11: 0.1778 T22: 0.2906 REMARK 3 T33: 0.2667 T12: -0.0721 REMARK 3 T13: -0.0132 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 7.4281 L22: 2.8843 REMARK 3 L33: 9.4075 L12: -0.1067 REMARK 3 L13: -6.4964 L23: -0.8617 REMARK 3 S TENSOR REMARK 3 S11: -0.0960 S12: 0.3100 S13: -0.2078 REMARK 3 S21: -0.1316 S22: 0.1263 S23: 0.3108 REMARK 3 S31: 0.5254 S32: -0.9487 S33: -0.0272 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9971 45.1304 37.7268 REMARK 3 T TENSOR REMARK 3 T11: 0.1344 T22: 0.1080 REMARK 3 T33: 0.1434 T12: 0.0263 REMARK 3 T13: 0.0075 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 3.0599 L22: 4.0092 REMARK 3 L33: 3.2391 L12: 1.3359 REMARK 3 L13: 0.5084 L23: 0.0386 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: 0.0724 S13: 0.0201 REMARK 3 S21: -0.1472 S22: 0.0587 S23: -0.0306 REMARK 3 S31: -0.1844 S32: -0.1234 S33: -0.0405 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1300029346. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4-5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ELETTRA REMARK 200 BEAMLINE : 11.2C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97910 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : XDS JAN 10, 2022 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85784 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 41.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.600 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.67600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX 1.20-4459 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: RECTANGULAR REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE 0.05 M SODIUM REMARK 280 ACETATE PH 4.5 30% PEG 8000, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.60200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.60200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.95150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.19450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.95150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.19450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.60200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 48.95150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 53.19450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.60200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 48.95150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 53.19450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 508 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 707 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 3 REMARK 465 GLY A 4 REMARK 465 SER A 5 REMARK 465 SER A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 SER A 13 REMARK 465 GLN A 14 REMARK 465 ALA A 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 611 O HOH A 638 2.17 REMARK 500 OG SER A 39 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 30 -70.09 -96.22 REMARK 500 ALA A 70 -81.58 -92.38 REMARK 500 ASP A 178 -167.03 -124.60 REMARK 500 REMARK 500 REMARK: NULL DBREF 8H5S A 17 262 UNP P9WKZ7 Y3400_MYCTU 17 262 SEQADV 8H5S MSE A 3 UNP P9WKZ7 INITIATING METHIONINE SEQADV 8H5S GLY A 4 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S SER A 5 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S SER A 6 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 7 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 8 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 9 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 10 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 11 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S HIS A 12 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S SER A 13 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S GLN A 14 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S ALA A 15 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S SER A 16 UNP P9WKZ7 EXPRESSION TAG SEQADV 8H5S LEU A 123 UNP P9WKZ7 HIS 123 ENGINEERED MUTATION SEQADV 8H5S MSE A 126 UNP P9WKZ7 LEU 126 ENGINEERED MUTATION SEQADV 8H5S MSE A 197 UNP P9WKZ7 LEU 197 ENGINEERED MUTATION SEQADV 8H5S MSE A 202 UNP P9WKZ7 LEU 202 ENGINEERED MUTATION SEQRES 1 A 260 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ALA SEQRES 2 A 260 SER LEU GLY LEU PRO GLU LYS VAL ARG ALA CYS LEU PHE SEQRES 3 A 260 ASP LEU ASP GLY VAL LEU THR ASP THR ALA SER LEU HIS SEQRES 4 A 260 THR LYS ALA TRP LYS ALA MSE PHE ASP ALA TYR LEU ALA SEQRES 5 A 260 GLU ARG ALA GLU ARG THR GLY GLU LYS PHE VAL PRO PHE SEQRES 6 A 260 ASP PRO ALA ALA ASP TYR HIS THR TYR VAL ASP GLY LYS SEQRES 7 A 260 LYS ARG GLU ASP GLY VAL ARG SER PHE LEU SER SER ARG SEQRES 8 A 260 ALA ILE GLU ILE PRO ASP GLY SER PRO ASP ASP PRO GLY SEQRES 9 A 260 ALA ALA GLU THR VAL TYR GLY LEU GLY ASN ARG LYS ASN SEQRES 10 A 260 ASP MSE LEU LEU LYS LEU MSE ARG ASP ASP GLY ALA GLN SEQRES 11 A 260 VAL PHE ASP GLY SER ARG ARG TYR LEU GLU ALA VAL THR SEQRES 12 A 260 ALA ALA GLY LEU GLY VAL ALA VAL VAL SER SER SER ALA SEQRES 13 A 260 ASN THR ARG ASP VAL LEU ALA THR THR GLY LEU ASP ARG SEQRES 14 A 260 PHE VAL GLN GLN ARG VAL ASP GLY VAL THR LEU ARG GLU SEQRES 15 A 260 GLU HIS ILE ALA GLY LYS PRO ALA PRO ASP SER PHE MSE SEQRES 16 A 260 ARG ALA ALA GLU MSE LEU GLY VAL THR PRO ASP ALA ALA SEQRES 17 A 260 ALA VAL PHE GLU ASP ALA LEU SER GLY VAL ALA ALA GLY SEQRES 18 A 260 ARG ALA GLY ASN PHE ALA VAL VAL VAL GLY ILE ASN ARG SEQRES 19 A 260 THR GLY ARG ALA ALA GLN ALA ALA GLN LEU ARG ARG HIS SEQRES 20 A 260 GLY ALA ASP VAL VAL VAL THR ASP LEU ALA GLU LEU LEU MODRES 8H5S MSE A 48 MET MODIFIED RESIDUE MODRES 8H5S MSE A 121 MET MODIFIED RESIDUE HET MSE A 48 8 HET MSE A 121 8 HET MSE A 126 8 HET MSE A 197 16 HET MSE A 202 8 HET GOL A 301 6 HET EDO A 302 4 HET CL A 303 1 HET CL A 304 1 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 GOL C3 H8 O3 FORMUL 3 EDO C2 H6 O2 FORMUL 4 CL 2(CL 1-) FORMUL 6 HOH *310(H2 O) HELIX 1 AA1 THR A 37 GLY A 61 1 25 HELIX 2 AA2 ALA A 70 VAL A 77 1 8 HELIX 3 AA3 LYS A 81 ARG A 93 1 13 HELIX 4 AA4 THR A 110 ASP A 129 1 20 HELIX 5 AA5 PHE A 134 ALA A 147 1 14 HELIX 6 AA6 ASN A 159 GLY A 168 1 10 HELIX 7 AA7 LEU A 169 VAL A 173 5 5 HELIX 8 AA8 ASP A 178 GLU A 185 1 8 HELIX 9 AA9 PRO A 193 GLY A 204 1 12 HELIX 10 AB1 THR A 206 ASP A 208 5 3 HELIX 11 AB2 ALA A 216 GLY A 226 1 11 HELIX 12 AB3 ARG A 239 HIS A 249 1 11 HELIX 13 AB4 ASP A 257 LEU A 262 5 6 SHEET 1 AA1 6 GLN A 175 VAL A 177 0 SHEET 2 AA1 6 GLY A 150 VAL A 154 1 N VAL A 153 O VAL A 177 SHEET 3 AA1 6 ALA A 25 PHE A 28 1 N CYS A 26 O GLY A 150 SHEET 4 AA1 6 ALA A 210 GLU A 214 1 O ALA A 211 N LEU A 27 SHEET 5 AA1 6 VAL A 230 ILE A 234 1 O VAL A 232 N VAL A 212 SHEET 6 AA1 6 VAL A 253 VAL A 255 1 O VAL A 253 N GLY A 233 LINK C ALA A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N PHE A 49 1555 1555 1.33 LINK C ASP A 120 N MSE A 121 1555 1555 1.33 LINK C MSE A 121 N LEU A 122 1555 1555 1.34 LINK C LEU A 125 N MSE A 126 1555 1555 1.33 LINK C MSE A 126 N ARG A 127 1555 1555 1.34 LINK C PHE A 196 N AMSE A 197 1555 1555 1.33 LINK C PHE A 196 N BMSE A 197 1555 1555 1.33 LINK C AMSE A 197 N ARG A 198 1555 1555 1.34 LINK C BMSE A 197 N ARG A 198 1555 1555 1.34 LINK C GLU A 201 N MSE A 202 1555 1555 1.33 LINK C MSE A 202 N LEU A 203 1555 1555 1.33 CISPEP 1 LYS A 190 PRO A 191 0 9.68 CRYST1 97.903 106.389 81.204 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010214 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009399 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012315 0.00000