HEADER HYDROLASE 25-OCT-22 8H97 TITLE GH86 AGARASE AGA86A_WA COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-AGARASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.81; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: WENYINGZHUANGIA SP. OF219; SOURCE 3 ORGANISM_TAXID: 1899020; SOURCE 4 GENE: AGA86A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS AGARASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.Y.ZHANG,S.DONG,Y.G.FENG,Y.G.CHANG REVDAT 2 08-NOV-23 8H97 1 REMARK REVDAT 1 22-FEB-23 8H97 0 JRNL AUTH Y.ZHANG,S.DONG,G.CHEN,S.CAO,J.SHEN,X.MEI,Q.CUI,Y.FENG, JRNL AUTH 2 Y.CHANG,Y.WANG,C.XUE JRNL TITL STRUCTURAL CHARACTERIZATION ON A BETA-AGARASE AGA86A_WA FROM JRNL TITL 2 WENYINGZHUANGIA AESTUARII REVEALS THE PREVALENT JRNL TITL 3 METHYL-GALACTOSE ACCOMMODATION CAPACITY OF GH86 ENZYMES AT JRNL TITL 4 SUBSITE -1. JRNL REF CARBOHYDR POLYM V. 306 20594 2023 JRNL REFN ESSN 1879-1344 JRNL PMID 36746585 JRNL DOI 10.1016/J.CARBPOL.2023.120594 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 71.3 REMARK 3 NUMBER OF REFLECTIONS : 52098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.350 REMARK 3 FREE R VALUE TEST SET COUNT : 2789 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.2900 - 5.9480 0.99 3419 195 0.1590 0.1755 REMARK 3 2 5.9480 - 4.7238 1.00 3454 197 0.1262 0.1601 REMARK 3 3 4.7238 - 4.1275 1.00 3449 192 0.1040 0.1593 REMARK 3 4 4.1275 - 3.7505 0.99 3445 195 0.1148 0.1813 REMARK 3 5 3.7505 - 3.4819 0.99 3414 193 0.1312 0.2095 REMARK 3 6 3.4819 - 3.2767 0.98 3379 193 0.1511 0.1921 REMARK 3 7 3.2767 - 3.1127 0.93 3222 181 0.1672 0.2312 REMARK 3 8 3.1127 - 2.9772 0.88 3038 172 0.1781 0.2965 REMARK 3 9 2.9772 - 2.8627 0.75 2595 151 0.1910 0.2365 REMARK 3 10 2.8627 - 2.7639 0.65 2223 125 0.1908 0.2619 REMARK 3 11 2.7639 - 2.6775 0.63 2172 119 0.1960 0.2307 REMARK 3 12 2.6775 - 2.6010 0.58 2026 115 0.2187 0.2251 REMARK 3 13 2.6010 - 2.5325 0.56 1914 104 0.2113 0.2442 REMARK 3 14 2.5325 - 2.4708 0.54 1866 107 0.2013 0.2547 REMARK 3 15 2.4708 - 2.4146 0.52 1798 103 0.2126 0.2498 REMARK 3 16 2.4146 - 2.3632 0.50 1743 98 0.2021 0.2949 REMARK 3 17 2.3632 - 2.3160 0.48 1626 93 0.2182 0.2847 REMARK 3 18 2.3160 - 2.2723 0.46 1619 91 0.2148 0.2904 REMARK 3 19 2.2723 - 2.2317 0.45 1552 88 0.2169 0.2800 REMARK 3 20 2.2317 - 2.1940 0.39 1355 77 0.2309 0.3247 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1828 65.3800 65.1218 REMARK 3 T TENSOR REMARK 3 T11: 0.2091 T22: 0.2495 REMARK 3 T33: 0.2644 T12: 0.0178 REMARK 3 T13: -0.0017 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 1.0244 L22: 0.9092 REMARK 3 L33: 0.7471 L12: 0.0998 REMARK 3 L13: 0.0856 L23: 0.1742 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: 0.0216 S13: -0.0980 REMARK 3 S21: -0.0720 S22: 0.0177 S23: 0.1400 REMARK 3 S31: -0.0507 S32: -0.1088 S33: 0.0086 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2862 82.9092 40.1393 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.3521 REMARK 3 T33: 0.3172 T12: 0.0178 REMARK 3 T13: -0.0161 T23: 0.0517 REMARK 3 L TENSOR REMARK 3 L11: 0.5865 L22: 0.3446 REMARK 3 L33: 0.1672 L12: -0.2670 REMARK 3 L13: 0.0917 L23: -0.2111 REMARK 3 S TENSOR REMARK 3 S11: -0.0075 S12: 0.5126 S13: 0.1888 REMARK 3 S21: -0.2512 S22: 0.0056 S23: 0.0099 REMARK 3 S31: 0.0261 S32: 0.0791 S33: 0.0247 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.7806 81.9617 57.7627 REMARK 3 T TENSOR REMARK 3 T11: 0.2274 T22: 0.2431 REMARK 3 T33: 0.2589 T12: 0.0209 REMARK 3 T13: 0.0045 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8580 L22: 0.5592 REMARK 3 L33: 0.5890 L12: -0.1680 REMARK 3 L13: 0.2643 L23: -0.1927 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.1111 S13: 0.2034 REMARK 3 S21: 0.0009 S22: -0.0116 S23: -0.0300 REMARK 3 S31: -0.0776 S32: 0.0740 S33: 0.0561 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 283 THROUGH 448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.9945 64.4004 68.0474 REMARK 3 T TENSOR REMARK 3 T11: 0.2453 T22: 0.2350 REMARK 3 T33: 0.2170 T12: 0.0058 REMARK 3 T13: 0.0012 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.8797 L22: 0.5960 REMARK 3 L33: 0.4116 L12: -0.0062 REMARK 3 L13: 0.2022 L23: 0.0749 REMARK 3 S TENSOR REMARK 3 S11: -0.0029 S12: -0.0288 S13: -0.0545 REMARK 3 S21: 0.0010 S22: 0.0067 S23: -0.0104 REMARK 3 S31: 0.0558 S32: -0.0361 S33: 0.0047 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 449 THROUGH 503 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.2309 53.4128 82.0308 REMARK 3 T TENSOR REMARK 3 T11: 0.3859 T22: 0.3498 REMARK 3 T33: 0.3573 T12: -0.0211 REMARK 3 T13: 0.0675 T23: 0.1024 REMARK 3 L TENSOR REMARK 3 L11: 0.4194 L22: 0.8975 REMARK 3 L33: 0.6392 L12: 0.0785 REMARK 3 L13: 0.0854 L23: 0.2371 REMARK 3 S TENSOR REMARK 3 S11: -0.0486 S12: -0.3720 S13: -0.2705 REMARK 3 S21: 0.3623 S22: 0.0421 S23: 0.0899 REMARK 3 S31: 0.2140 S32: -0.0364 S33: 0.0323 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 504 THROUGH 645 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8329 76.4869 89.2802 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.3163 REMARK 3 T33: 0.2567 T12: 0.0258 REMARK 3 T13: 0.0117 T23: -0.0345 REMARK 3 L TENSOR REMARK 3 L11: 0.6180 L22: 0.5377 REMARK 3 L33: 0.5107 L12: 0.0290 REMARK 3 L13: 0.2070 L23: 0.1540 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: -0.2163 S13: 0.0950 REMARK 3 S21: 0.1899 S22: 0.0040 S23: 0.0427 REMARK 3 S31: 0.0201 S32: -0.0782 S33: -0.0012 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H97 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 01-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300033102. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52098 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.86100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5TA1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% PEG 6000, 0.1 M TRIS BUFFER, PH REMARK 280 8.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.29950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.04500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.33600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.04500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.29950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.33600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 SER A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 GLY A 6 REMARK 465 LEU A 7 REMARK 465 VAL A 8 REMARK 465 PRO A 9 REMARK 465 ARG A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 HIS A 13 REMARK 465 MET A 14 REMARK 465 ALA A 15 REMARK 465 SER A 16 REMARK 465 MET A 17 REMARK 465 THR A 18 REMARK 465 GLY A 19 REMARK 465 GLY A 20 REMARK 465 GLN A 21 REMARK 465 GLN A 22 REMARK 465 MET A 23 REMARK 465 GLY A 24 REMARK 465 ARG A 25 REMARK 465 GLY A 26 REMARK 465 LEU A 646 REMARK 465 SER A 647 REMARK 465 VAL A 648 REMARK 465 ASN A 649 REMARK 465 ASP A 650 REMARK 465 VAL A 651 REMARK 465 THR A 652 REMARK 465 ALA A 653 REMARK 465 SER A 654 REMARK 465 ASP A 655 REMARK 465 THR A 656 REMARK 465 LYS A 657 REMARK 465 THR A 658 REMARK 465 LEU A 659 REMARK 465 LEU A 660 REMARK 465 ILE A 661 REMARK 465 SER A 662 REMARK 465 PRO A 663 REMARK 465 ASN A 664 REMARK 465 PRO A 665 REMARK 465 VAL A 666 REMARK 465 LYS A 667 REMARK 465 ASP A 668 REMARK 465 GLY A 669 REMARK 465 MET A 670 REMARK 465 LEU A 671 REMARK 465 ASN A 672 REMARK 465 MET A 673 REMARK 465 THR A 674 REMARK 465 ILE A 675 REMARK 465 PRO A 676 REMARK 465 ALA A 677 REMARK 465 LYS A 678 REMARK 465 LEU A 679 REMARK 465 LYS A 680 REMARK 465 ASN A 681 REMARK 465 PRO A 682 REMARK 465 ILE A 683 REMARK 465 ALA A 684 REMARK 465 SER A 685 REMARK 465 ILE A 686 REMARK 465 TYR A 687 REMARK 465 ASN A 688 REMARK 465 VAL A 689 REMARK 465 SER A 690 REMARK 465 GLY A 691 REMARK 465 SER A 692 REMARK 465 LEU A 693 REMARK 465 LEU A 694 REMARK 465 ILE A 695 REMARK 465 LYS A 696 REMARK 465 GLN A 697 REMARK 465 SER A 698 REMARK 465 MET A 699 REMARK 465 LYS A 700 REMARK 465 HIS A 701 REMARK 465 SER A 702 REMARK 465 GLN A 703 REMARK 465 THR A 704 REMARK 465 SER A 705 REMARK 465 ILE A 706 REMARK 465 PRO A 707 REMARK 465 VAL A 708 REMARK 465 ASN A 709 REMARK 465 LEU A 710 REMARK 465 PHE A 711 REMARK 465 ASP A 712 REMARK 465 LYS A 713 REMARK 465 GLY A 714 REMARK 465 VAL A 715 REMARK 465 TYR A 716 REMARK 465 LEU A 717 REMARK 465 LEU A 718 REMARK 465 VAL A 719 REMARK 465 LEU A 720 REMARK 465 GLN A 721 REMARK 465 ASP A 722 REMARK 465 GLY A 723 REMARK 465 SER A 724 REMARK 465 LYS A 725 REMARK 465 LYS A 726 REMARK 465 ILE A 727 REMARK 465 GLY A 728 REMARK 465 GLU A 729 REMARK 465 SER A 730 REMARK 465 LYS A 731 REMARK 465 PHE A 732 REMARK 465 VAL A 733 REMARK 465 ILE A 734 REMARK 465 GLN A 735 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1245 O HOH A 1263 2.13 REMARK 500 O HOH A 1228 O HOH A 1273 2.15 REMARK 500 OH TYR A 464 OD2 ASP A 518 2.17 REMARK 500 O HOH A 1276 O HOH A 1294 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 45 25.93 -152.60 REMARK 500 PRO A 247 95.35 -68.24 REMARK 500 ARG A 260 -79.53 -118.76 REMARK 500 PHE A 282 73.49 -115.67 REMARK 500 MET A 363 131.55 -173.96 REMARK 500 ILE A 517 73.53 -101.66 REMARK 500 THR A 613 -164.55 -121.55 REMARK 500 SER A 626 156.34 86.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1297 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A1298 DISTANCE = 6.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 804 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 424 O REMARK 620 2 HOH A1130 O 70.2 REMARK 620 3 HOH A1135 O 79.6 89.4 REMARK 620 4 HOH A1233 O 152.9 134.9 89.3 REMARK 620 5 HOH A1252 O 106.8 89.7 172.7 86.2 REMARK 620 6 HOH A1278 O 135.6 65.5 100.9 70.5 72.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 803 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 428 OD1 REMARK 620 2 ASP A 428 OD2 53.7 REMARK 620 3 ASP A 430 OD2 82.5 136.0 REMARK 620 4 ASP A 587 OD2 89.1 84.9 91.6 REMARK 620 5 HOH A 984 O 147.5 158.7 65.2 95.1 REMARK 620 6 HOH A1074 O 95.6 97.5 89.5 175.2 81.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 802 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 430 OD1 REMARK 620 2 ASP A 430 OD2 54.3 REMARK 620 3 ASP A 587 OD1 120.3 75.0 REMARK 620 4 TRP A 588 O 85.0 115.1 90.9 REMARK 620 5 GLY A 590 O 76.9 121.9 162.3 86.4 REMARK 620 6 HOH A1079 O 104.3 74.8 88.4 169.5 91.1 REMARK 620 7 HOH A1179 O 151.5 153.9 84.8 81.0 77.5 88.6 REMARK 620 N 1 2 3 4 5 6 DBREF1 8H97 A 27 735 UNP A0A516RTC5_9FLAO DBREF2 8H97 A A0A516RTC5 27 735 SEQADV 8H97 MET A -6 UNP A0A516RTC INITIATING METHIONINE SEQADV 8H97 GLY A -5 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A -4 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A -3 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A -2 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A -1 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A 0 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A 1 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A 2 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A 3 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A 4 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A 5 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 6 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 LEU A 7 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 VAL A 8 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 PRO A 9 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 ARG A 10 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 11 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A 12 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 HIS A 13 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 MET A 14 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 ALA A 15 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 SER A 16 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 MET A 17 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 THR A 18 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 19 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 20 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLN A 21 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLN A 22 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 MET A 23 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 24 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 ARG A 25 UNP A0A516RTC EXPRESSION TAG SEQADV 8H97 GLY A 26 UNP A0A516RTC EXPRESSION TAG SEQRES 1 A 742 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 742 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 742 GLY GLN GLN MET GLY ARG GLY SER GLN ALA LYS VAL SER SEQRES 4 A 742 VAL ASN LEU ASN VAL LYS HIS VAL VAL GLY GLY ILE SER SEQRES 5 A 742 GLU PHE ASP ARG THR LYS TYR ILE THR ILE HIS ALA ASN SEQRES 6 A 742 GLN ILE GLU ASN GLU TRP ASP GLY ASP ASN PHE THR SER SEQRES 7 A 742 ASP LEU ARG ASP HIS PHE LEU ASN GLY PHE ASP VAL TYR SEQRES 8 A 742 LEU GLY ARG ASP THR GLY GLY ILE THR TRP ASN LEU ASN SEQRES 9 A 742 ASN MET GLN GLU ASP ALA SER ARG PRO GLY PHE ALA ASN SEQRES 10 A 742 PRO SER ASN ILE ILE SER LYS GLY ILE ASN THR ARG ASN SEQRES 11 A 742 ASN TYR ALA SER LYS THR HIS LEU HIS VAL TYR GLU ASN SEQRES 12 A 742 ARG LYS SER ASN HIS VAL VAL ALA ALA GLN LEU HIS PRO SEQRES 13 A 742 PHE TRP THR GLY GLU SER GLN ILE ALA THR LYS GLY THR SEQRES 14 A 742 GLY TRP GLU LEU ALA SER PRO THR ALA THR GLY GLU TYR SEQRES 15 A 742 MET GLY ARG TYR PHE ASN GLU PHE TYR GLY GLY ASN GLY SEQRES 16 A 742 GLU PRO VAL PRO SER TRP ILE GLU VAL ILE ASN GLU PRO SEQRES 17 A 742 ALA TYR GLU ALA LEU GLY GLY LYS LYS ASN PHE THR ASN SEQRES 18 A 742 SER LEU GLN GLU ILE ALA ASP PHE HIS VAL GLU VAL ALA SEQRES 19 A 742 ASP ALA ILE ARG VAL GLN ASN PRO ASN LEU LYS ILE GLY SEQRES 20 A 742 GLY TYR THR ALA ALA PHE PRO ASP PHE GLU THR GLY ASP SEQRES 21 A 742 PHE GLN ARG TRP ILE ASN ARG ASP LYS LEU PHE ILE ASP SEQRES 22 A 742 VAL ALA GLY GLU LYS MET ASP PHE TRP SER TRP HIS LEU SEQRES 23 A 742 TYR ASP PHE PRO VAL ILE GLY GLY LYS GLU ASP ILE ARG SEQRES 24 A 742 SER GLY SER ASN VAL GLU ALA THR PHE ASP MET HIS ASP SEQRES 25 A 742 HIS TYR SER MET LEU LYS LEU GLY HIS LYS LYS PRO TYR SEQRES 26 A 742 VAL ILE SER GLU TYR GLY ALA GLN THR HIS ASP PHE ARG SEQRES 27 A 742 ASN GLU GLY TRP SER SER TYR ARG ASP TRP LEU PHE VAL SEQRES 28 A 742 ARG ALA GLN ASN SER LEU MET MET SER PHE MET GLU ARG SEQRES 29 A 742 PRO GLU ASP ILE ALA MET ALA ILE PRO PHE THR ILE VAL SEQRES 30 A 742 LYS ALA GLU TRP GLY PHE ASN THR ASP LYS ASN LEU PRO SEQRES 31 A 742 TYR PRO ALA ARG LEU MET ARG LYS ALA ASN GLU PRO GLU SEQRES 32 A 742 SER TYR THR GLY GLU TRP VAL TYR THR ASP ARG VAL LYS SEQRES 33 A 742 PHE TYR ASP LEU TRP LYS ASN VAL LYS GLY THR ARG ILE SEQRES 34 A 742 ASP THR LYS SER THR ASP LEU ASP ILE GLN VAL ASP ALA SEQRES 35 A 742 TYR VAL ASP GLY ASN LYS GLY TYR LEU ILE LEU ASN ASN SEQRES 36 A 742 LEU GLU SER GLU GLU THR GLU ILE THR LEU ASP VAL PHE SEQRES 37 A 742 GLU LYS TYR ASP SER SER ILE THR ASN ILE LEU LYS ARG SEQRES 38 A 742 HIS LEU THR LEU SER SER ASN ASN VAL VAL ILE GLU GLU SEQRES 39 A 742 GLU THR PHE SER SER SER ILE SER THR VAL GLN LEU GLY SEQRES 40 A 742 ALA GLY SER THR MET ILE LEU GLU TYR THR PHE ALA ASN SEQRES 41 A 742 SER LEU THR ILE ASP GLU THR SER THR GLU GLU LYS TYR SEQRES 42 A 742 TYR ALA ASP SER TYR LEU GLN PRO ILE VAL ALA SER GLN SEQRES 43 A 742 PRO ILE LEU PHE ALA VAL ASN ASN VAL VAL LYS SER ALA SEQRES 44 A 742 THR TYR GLY GLU ALA VAL LEU ARG LEU GLY LEU GLY ARG SEQRES 45 A 742 ASP HIS GLY LYS SER LEU LYS PRO ILE VAL LYS VAL ASN SEQRES 46 A 742 ASN THR GLU VAL VAL VAL PRO ASP ASP TRP ARG GLY TYR SEQRES 47 A 742 ASP GLN ALA ASP LYS GLY ARG PHE PHE GLY THR ILE GLU SEQRES 48 A 742 ILE PRO VAL SER TYR ASP LEU LEU THR THR ASN ASN THR SEQRES 49 A 742 VAL SER VAL GLU PHE PRO ASP SER SER GLY HIS VAL SER SEQRES 50 A 742 SER VAL ILE MET GLN VAL PHE ASN PHE SER SER ASP ILE SEQRES 51 A 742 ARG THR LEU SER VAL ASN ASP VAL THR ALA SER ASP THR SEQRES 52 A 742 LYS THR LEU LEU ILE SER PRO ASN PRO VAL LYS ASP GLY SEQRES 53 A 742 MET LEU ASN MET THR ILE PRO ALA LYS LEU LYS ASN PRO SEQRES 54 A 742 ILE ALA SER ILE TYR ASN VAL SER GLY SER LEU LEU ILE SEQRES 55 A 742 LYS GLN SER MET LYS HIS SER GLN THR SER ILE PRO VAL SEQRES 56 A 742 ASN LEU PHE ASP LYS GLY VAL TYR LEU LEU VAL LEU GLN SEQRES 57 A 742 ASP GLY SER LYS LYS ILE GLY GLU SER LYS PHE VAL ILE SEQRES 58 A 742 GLN HET P6G A 801 19 HET CA A 802 1 HET CA A 803 1 HET CA A 804 1 HETNAM P6G HEXAETHYLENE GLYCOL HETNAM CA CALCIUM ION HETSYN P6G POLYETHYLENE GLYCOL PEG400 FORMUL 2 P6G C12 H26 O7 FORMUL 3 CA 3(CA 2+) FORMUL 6 HOH *398(H2 O) HELIX 1 AA1 ASP A 48 ILE A 53 1 6 HELIX 2 AA2 GLU A 61 ASP A 65 5 5 HELIX 3 AA3 ASP A 72 ASN A 79 1 8 HELIX 4 AA4 THR A 89 ASN A 98 1 10 HELIX 5 AA5 ASN A 110 LYS A 128 1 19 HELIX 6 AA6 THR A 129 LYS A 138 5 10 HELIX 7 AA7 SER A 168 PHE A 183 1 16 HELIX 8 AA8 PRO A 201 LEU A 206 1 6 HELIX 9 AA9 LEU A 216 ASN A 234 1 19 HELIX 10 AB1 PHE A 254 ARG A 260 1 7 HELIX 11 AB2 ARG A 260 GLY A 269 1 10 HELIX 12 AB3 GLU A 270 MET A 272 5 3 HELIX 13 AB4 GLY A 294 GLY A 313 1 20 HELIX 14 AB5 THR A 327 ARG A 331 5 5 HELIX 15 AB6 SER A 336 GLU A 356 1 21 HELIX 16 AB7 ARG A 357 GLU A 359 5 3 HELIX 17 AB8 ALA A 372 PHE A 376 5 5 HELIX 18 AB9 ARG A 407 LYS A 415 1 9 SHEET 1 AA110 ASN A 482 PHE A 490 0 SHEET 2 AA110 ILE A 468 SER A 479 -1 N HIS A 475 O GLU A 486 SHEET 3 AA110 THR A 504 PHE A 511 -1 O GLU A 508 N LEU A 472 SHEET 4 AA110 LYS A 441 ASN A 448 -1 N LEU A 446 O MET A 505 SHEET 5 AA110 ILE A 431 ASP A 438 -1 N ASP A 434 O ILE A 445 SHEET 6 AA110 THR A 420 SER A 426 -1 N THR A 420 O VAL A 437 SHEET 7 AA110 GLN A 28 VAL A 41 -1 N SER A 32 O LYS A 425 SHEET 8 AA110 GLU A 519 TYR A 527 1 O SER A 521 N LYS A 38 SHEET 9 AA110 HIS A 628 PHE A 639 -1 O VAL A 636 N GLU A 524 SHEET 10 AA110 GLN A 533 PRO A 534 -1 N GLN A 533 O VAL A 629 SHEET 1 AA2 7 THR A 496 LEU A 499 0 SHEET 2 AA2 7 THR A 454 PHE A 461 -1 N ILE A 456 O VAL A 497 SHEET 3 AA2 7 GLN A 28 VAL A 41 1 N VAL A 31 O ASP A 459 SHEET 4 AA2 7 GLU A 519 TYR A 527 1 O SER A 521 N LYS A 38 SHEET 5 AA2 7 HIS A 628 PHE A 639 -1 O VAL A 636 N GLU A 524 SHEET 6 AA2 7 TYR A 554 ARG A 565 -1 N VAL A 558 O GLN A 635 SHEET 7 AA2 7 PHE A 599 SER A 608 -1 O ILE A 605 N LEU A 559 SHEET 1 AA3 2 THR A 54 ILE A 55 0 SHEET 2 AA3 2 TYR A 84 LEU A 85 1 O TYR A 84 N ILE A 55 SHEET 1 AA4 6 ARG A 87 ASP A 88 0 SHEET 2 AA4 6 VAL A 142 ALA A 144 1 O VAL A 142 N ASP A 88 SHEET 3 AA4 6 TRP A 194 GLU A 196 1 O TRP A 194 N VAL A 143 SHEET 4 AA4 6 LYS A 238 ALA A 244 1 O GLY A 240 N ILE A 195 SHEET 5 AA4 6 PHE A 274 ILE A 285 1 O SER A 276 N GLY A 241 SHEET 6 AA4 6 LYS A 288 ASP A 290 -1 O ASP A 290 N PHE A 282 SHEET 1 AA5 7 ARG A 87 ASP A 88 0 SHEET 2 AA5 7 VAL A 142 ALA A 144 1 O VAL A 142 N ASP A 88 SHEET 3 AA5 7 TRP A 194 GLU A 196 1 O TRP A 194 N VAL A 143 SHEET 4 AA5 7 LYS A 238 ALA A 244 1 O GLY A 240 N ILE A 195 SHEET 5 AA5 7 PHE A 274 ILE A 285 1 O SER A 276 N GLY A 241 SHEET 6 AA5 7 TYR A 318 ALA A 325 1 O GLY A 324 N ASP A 281 SHEET 7 AA5 7 ILE A 361 PRO A 366 1 O ILE A 365 N ILE A 320 SHEET 1 AA6 2 MET A 389 LYS A 391 0 SHEET 2 AA6 2 TRP A 402 TYR A 404 -1 O VAL A 403 N ARG A 390 SHEET 1 AA7 4 ILE A 541 VAL A 545 0 SHEET 2 AA7 4 ASN A 616 GLU A 621 -1 O ASN A 616 N VAL A 545 SHEET 3 AA7 4 ILE A 574 VAL A 577 -1 N LYS A 576 O SER A 619 SHEET 4 AA7 4 THR A 580 VAL A 582 -1 O THR A 580 N VAL A 577 LINK O THR A 424 CA CA A 804 1555 1555 2.21 LINK OD1 ASP A 428 CA CA A 803 1555 1555 2.53 LINK OD2 ASP A 428 CA CA A 803 1555 1555 2.35 LINK OD1 ASP A 430 CA CA A 802 1555 1555 2.37 LINK OD2 ASP A 430 CA CA A 802 1555 1555 2.45 LINK OD2 ASP A 430 CA CA A 803 1555 1555 2.40 LINK OD1 ASP A 587 CA CA A 802 1555 1555 2.24 LINK OD2 ASP A 587 CA CA A 803 1555 1555 2.22 LINK O TRP A 588 CA CA A 802 1555 1555 2.28 LINK O GLY A 590 CA CA A 802 1555 1555 2.38 LINK CA CA A 802 O HOH A1079 1555 1555 2.36 LINK CA CA A 802 O HOH A1179 1555 1555 2.28 LINK CA CA A 803 O HOH A 984 1555 1555 2.40 LINK CA CA A 803 O HOH A1074 1555 1555 2.30 LINK CA CA A 804 O HOH A1130 1555 1555 2.64 LINK CA CA A 804 O HOH A1135 1555 1555 2.41 LINK CA CA A 804 O HOH A1233 1555 1555 2.42 LINK CA CA A 804 O HOH A1252 1555 1555 2.31 LINK CA CA A 804 O HOH A1278 1555 1555 2.29 CISPEP 1 LEU A 85 GLY A 86 0 -0.92 CISPEP 2 HIS A 148 PRO A 149 0 3.72 CISPEP 3 GLY A 241 TYR A 242 0 -7.32 CISPEP 4 GLU A 394 PRO A 395 0 -0.41 CRYST1 76.599 90.672 106.090 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013055 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011029 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009426 0.00000