HEADER DNA BINDING PROTEIN 25-OCT-22 8H9H TITLE CRYSTAL STRUCTURE OF ZBTB7A IN COMPLEX WITH GACCC-CONTAINING SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*TP*AP*AP*GP*GP*AP*CP*CP*CP*AP*GP*AP*T)-3'); COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(P*AP*AP*TP*CP*TP*GP*GP*GP*TP*CP*CP*TP*T)-3'); COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ZINC FINGER AND BTB DOMAIN-CONTAINING PROTEIN 7A; COMPND 11 CHAIN: G, F; COMPND 12 SYNONYM: FACTOR BINDING IST PROTEIN 1,FBI-1,FACTOR THAT BINDS TO COMPND 13 INDUCER OF SHORT TRANSCRIPTS PROTEIN 1,HIV-1 1ST-BINDING PROTEIN 1, COMPND 14 LEUKEMIA/LYMPHOMA-RELATED FACTOR,POZ AND KRUEPPEL ERYTHROID MYELOID COMPND 15 ONTOGENIC FACTOR,POK ERYTHROID MYELOID ONTOGENIC FACTOR,POKEMON, COMPND 16 POKEMON 1,TTF-I-INTERACTING PEPTIDE 21,TIP21,ZINC FINGER PROTEIN COMPND 17 857A; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 8 ORGANISM_TAXID: 10090; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: ZBTB7A, FBI1, LRF, ZBTB7, ZNF857A; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ZBTB7A, PRIMED TO NAIVE TRANSITION, TRANSCRIPTION REGULATION, DNA KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.YANG REVDAT 3 29-NOV-23 8H9H 1 REMARK REVDAT 2 16-AUG-23 8H9H 1 JRNL REVDAT 1 26-APR-23 8H9H 0 JRNL AUTH Y.YANG,L.XIAO,Y.XUE,M.O.IDRIS,J.LIU,D.PEI,Y.SHI,B.LIAO,F.LI JRNL TITL ZBTB7A REGULATES PRIMED-TO-NAIVE TRANSITION OF PLURIPOTENT JRNL TITL 2 STEM CELLS VIA RECOGNITION OF THE PNT-ASSOCIATED SEQUENCE BY JRNL TITL 3 ZINC FINGERS 1-2 AND RECOGNITION OF GAMMA-GLOBIN -200 GENE JRNL TITL 4 ELEMENT BY ZINC FINGERS 1-4. JRNL REF FEBS J. V. 290 3896 2023 JRNL REFN ISSN 1742-464X JRNL PMID 37013936 JRNL DOI 10.1111/FEBS.16789 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 23116 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.220 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3000 - 4.5800 1.00 2424 146 0.1886 0.2080 REMARK 3 2 4.5800 - 3.6300 1.00 2462 121 0.1777 0.2489 REMARK 3 3 3.6300 - 3.1700 1.00 2421 126 0.2274 0.2493 REMARK 3 4 3.1700 - 2.8800 1.00 2413 161 0.2706 0.2938 REMARK 3 5 2.8800 - 2.6800 1.00 2420 149 0.3116 0.3684 REMARK 3 6 2.6800 - 2.5200 1.00 2464 114 0.3482 0.4232 REMARK 3 7 2.5200 - 2.3900 1.00 2446 122 0.3009 0.3002 REMARK 3 8 2.3900 - 2.2900 1.00 2436 139 0.2902 0.3569 REMARK 3 9 2.2900 - 2.2000 1.00 2424 128 0.3427 0.3699 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.540 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4476 18.6573 -6.9015 REMARK 3 T TENSOR REMARK 3 T11: 0.6298 T22: 0.5449 REMARK 3 T33: 0.7927 T12: 0.0279 REMARK 3 T13: -0.0621 T23: -0.1477 REMARK 3 L TENSOR REMARK 3 L11: 3.4237 L22: 4.8666 REMARK 3 L33: 9.2213 L12: -1.8870 REMARK 3 L13: 1.7594 L23: 1.3368 REMARK 3 S TENSOR REMARK 3 S11: -0.2745 S12: 0.0583 S13: -0.3461 REMARK 3 S21: -0.4103 S22: 0.1548 S23: 0.4424 REMARK 3 S31: 0.1869 S32: -0.4767 S33: 0.0668 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9224 18.6281 -6.5193 REMARK 3 T TENSOR REMARK 3 T11: 0.6200 T22: 0.6213 REMARK 3 T33: 0.8193 T12: 0.0332 REMARK 3 T13: -0.0229 T23: -0.2125 REMARK 3 L TENSOR REMARK 3 L11: 6.0242 L22: 4.3723 REMARK 3 L33: 6.9636 L12: -1.1068 REMARK 3 L13: 0.7567 L23: -0.8622 REMARK 3 S TENSOR REMARK 3 S11: 0.2355 S12: -0.2813 S13: 0.6149 REMARK 3 S21: -0.0111 S22: -0.0541 S23: 1.4242 REMARK 3 S31: -0.8157 S32: -0.9459 S33: -0.0668 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 380 THROUGH 410 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7866 8.7240 -4.6282 REMARK 3 T TENSOR REMARK 3 T11: 0.3935 T22: 0.3482 REMARK 3 T33: 0.4652 T12: 0.0352 REMARK 3 T13: -0.0192 T23: -0.0895 REMARK 3 L TENSOR REMARK 3 L11: 4.8674 L22: 4.6158 REMARK 3 L33: 5.2745 L12: -0.3131 REMARK 3 L13: -1.3221 L23: -3.0152 REMARK 3 S TENSOR REMARK 3 S11: -0.0424 S12: -0.0268 S13: -0.0442 REMARK 3 S21: -0.0633 S22: 0.1290 S23: -0.0308 REMARK 3 S31: 0.2375 S32: 0.0693 S33: -0.0780 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 411 THROUGH 433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1862 20.8500 8.4338 REMARK 3 T TENSOR REMARK 3 T11: 0.5727 T22: 0.7322 REMARK 3 T33: 0.5725 T12: 0.0792 REMARK 3 T13: -0.0418 T23: -0.2467 REMARK 3 L TENSOR REMARK 3 L11: 9.2871 L22: 3.7181 REMARK 3 L33: 6.1071 L12: -5.4570 REMARK 3 L13: -5.9746 L23: 4.2995 REMARK 3 S TENSOR REMARK 3 S11: -0.3493 S12: -0.7047 S13: 0.6524 REMARK 3 S21: 0.8544 S22: 0.0676 S23: -0.0311 REMARK 3 S31: 0.3942 S32: -0.7111 S33: 0.2362 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 434 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.9633 30.2546 -4.4341 REMARK 3 T TENSOR REMARK 3 T11: 0.7039 T22: 0.7813 REMARK 3 T33: 0.9002 T12: 0.1134 REMARK 3 T13: 0.0751 T23: -0.1867 REMARK 3 L TENSOR REMARK 3 L11: 8.4248 L22: 3.7288 REMARK 3 L33: 7.0144 L12: -4.8665 REMARK 3 L13: -1.8315 L23: 2.5674 REMARK 3 S TENSOR REMARK 3 S11: 0.3570 S12: 0.5510 S13: 0.0331 REMARK 3 S21: -0.5539 S22: -0.2946 S23: -0.5259 REMARK 3 S31: 0.6412 S32: 0.0442 S33: 0.0204 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 436 THROUGH 449 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2554 6.7240 -2.4677 REMARK 3 T TENSOR REMARK 3 T11: 1.2332 T22: 1.2326 REMARK 3 T33: 1.6251 T12: -0.1792 REMARK 3 T13: 0.3549 T23: -0.0960 REMARK 3 L TENSOR REMARK 3 L11: 9.6781 L22: 3.1682 REMARK 3 L33: 7.1654 L12: -2.2582 REMARK 3 L13: 1.8968 L23: 3.7671 REMARK 3 S TENSOR REMARK 3 S11: -0.9672 S12: 0.3220 S13: 0.2721 REMARK 3 S21: -0.1378 S22: 1.0263 S23: -1.6114 REMARK 3 S31: -0.9382 S32: 1.6972 S33: 0.3007 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 450 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3941 14.0095 -0.0044 REMARK 3 T TENSOR REMARK 3 T11: 1.2130 T22: 2.0387 REMARK 3 T33: 1.5562 T12: -0.2267 REMARK 3 T13: -0.2047 T23: -0.3710 REMARK 3 L TENSOR REMARK 3 L11: 1.1601 L22: 6.6464 REMARK 3 L33: 7.1817 L12: -1.3945 REMARK 3 L13: 2.6794 L23: -0.9993 REMARK 3 S TENSOR REMARK 3 S11: -0.4086 S12: 0.3074 S13: 0.1425 REMARK 3 S21: -0.3287 S22: 1.1876 S23: -1.1567 REMARK 3 S31: 1.4516 S32: 2.7115 S33: -0.6561 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8H9H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1300033101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9785 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23116 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 36.00 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 37.00 REMARK 200 R MERGE FOR SHELL (I) : 2.13700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7EYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CHLORIDE, 0.1 M BIS-TRIS, REMARK 280 PH 5.5, 25% W/V PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 134.39067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.19533 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 100.79300 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.59767 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 167.98833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 134.39067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 67.19533 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.59767 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 100.79300 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 167.98833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY G 378 REMARK 465 SER G 379 REMARK 465 THR G 461 REMARK 465 GLY G 462 REMARK 465 LEU G 463 REMARK 465 ARG G 464 REMARK 465 GLY F 378 REMARK 465 SER F 379 REMARK 465 HIS F 380 REMARK 465 MET F 381 REMARK 465 GLN F 382 REMARK 465 LYS F 383 REMARK 465 CYS F 384 REMARK 465 PRO F 385 REMARK 465 ILE F 386 REMARK 465 CYS F 387 REMARK 465 GLU F 388 REMARK 465 LYS F 389 REMARK 465 VAL F 390 REMARK 465 ILE F 391 REMARK 465 GLN F 392 REMARK 465 GLY F 393 REMARK 465 ALA F 394 REMARK 465 GLY F 395 REMARK 465 LYS F 396 REMARK 465 LEU F 397 REMARK 465 PRO F 398 REMARK 465 ARG F 399 REMARK 465 HIS F 400 REMARK 465 ILE F 401 REMARK 465 ARG F 402 REMARK 465 THR F 403 REMARK 465 HIS F 404 REMARK 465 THR F 405 REMARK 465 GLY F 406 REMARK 465 GLU F 407 REMARK 465 LYS F 408 REMARK 465 PRO F 409 REMARK 465 TYR F 410 REMARK 465 GLU F 411 REMARK 465 CYS F 412 REMARK 465 ASN F 413 REMARK 465 ILE F 414 REMARK 465 CYS F 415 REMARK 465 LYS F 416 REMARK 465 VAL F 417 REMARK 465 ARG F 418 REMARK 465 PHE F 419 REMARK 465 THR F 420 REMARK 465 ARG F 421 REMARK 465 GLN F 422 REMARK 465 ASP F 423 REMARK 465 LYS F 424 REMARK 465 LEU F 425 REMARK 465 LYS F 426 REMARK 465 VAL F 427 REMARK 465 HIS F 428 REMARK 465 MET F 429 REMARK 465 ARG F 430 REMARK 465 LYS F 431 REMARK 465 HIS F 432 REMARK 465 THR F 433 REMARK 465 GLY F 434 REMARK 465 GLU F 435 REMARK 465 THR F 461 REMARK 465 GLY F 462 REMARK 465 LEU F 463 REMARK 465 ARG F 464 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DA A 2 O3' DA A 2 C3' -0.037 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 2 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DG B 6 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 384 SG REMARK 620 2 CYS G 387 SG 114.9 REMARK 620 3 HIS G 400 NE2 108.1 107.7 REMARK 620 4 HIS G 404 NE2 110.6 110.4 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 412 SG REMARK 620 2 CYS G 415 SG 109.4 REMARK 620 3 HIS G 428 NE2 110.7 101.1 REMARK 620 4 HIS G 432 NE2 107.6 122.5 104.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN G 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS G 440 SG REMARK 620 2 CYS G 443 SG 118.1 REMARK 620 3 HIS G 456 NE2 115.0 102.3 REMARK 620 4 HIS G 460 NE2 104.0 118.1 98.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 440 SG REMARK 620 2 CYS F 443 SG 115.4 REMARK 620 3 HIS F 456 NE2 148.4 74.5 REMARK 620 4 HIS F 460 NE2 104.7 106.3 100.4 REMARK 620 N 1 2 3 DBREF 8H9H A 0 12 PDB 8H9H 8H9H 0 12 DBREF 8H9H B 0 12 PDB 8H9H 8H9H 0 12 DBREF 8H9H G 382 464 UNP O95365 ZBT7A_HUMAN 382 464 DBREF 8H9H F 382 464 UNP O95365 ZBT7A_HUMAN 382 464 SEQADV 8H9H GLY G 378 UNP O95365 EXPRESSION TAG SEQADV 8H9H SER G 379 UNP O95365 EXPRESSION TAG SEQADV 8H9H HIS G 380 UNP O95365 EXPRESSION TAG SEQADV 8H9H MET G 381 UNP O95365 EXPRESSION TAG SEQADV 8H9H GLY F 378 UNP O95365 EXPRESSION TAG SEQADV 8H9H SER F 379 UNP O95365 EXPRESSION TAG SEQADV 8H9H HIS F 380 UNP O95365 EXPRESSION TAG SEQADV 8H9H MET F 381 UNP O95365 EXPRESSION TAG SEQRES 1 A 13 DT DA DA DG DG DA DC DC DC DA DG DA DT SEQRES 1 B 13 DA DA DT DC DT DG DG DG DT DC DC DT DT SEQRES 1 G 87 GLY SER HIS MET GLN LYS CYS PRO ILE CYS GLU LYS VAL SEQRES 2 G 87 ILE GLN GLY ALA GLY LYS LEU PRO ARG HIS ILE ARG THR SEQRES 3 G 87 HIS THR GLY GLU LYS PRO TYR GLU CYS ASN ILE CYS LYS SEQRES 4 G 87 VAL ARG PHE THR ARG GLN ASP LYS LEU LYS VAL HIS MET SEQRES 5 G 87 ARG LYS HIS THR GLY GLU LYS PRO TYR LEU CYS GLN GLN SEQRES 6 G 87 CYS GLY ALA ALA PHE ALA HIS ASN TYR ASP LEU LYS ASN SEQRES 7 G 87 HIS MET ARG VAL HIS THR GLY LEU ARG SEQRES 1 F 87 GLY SER HIS MET GLN LYS CYS PRO ILE CYS GLU LYS VAL SEQRES 2 F 87 ILE GLN GLY ALA GLY LYS LEU PRO ARG HIS ILE ARG THR SEQRES 3 F 87 HIS THR GLY GLU LYS PRO TYR GLU CYS ASN ILE CYS LYS SEQRES 4 F 87 VAL ARG PHE THR ARG GLN ASP LYS LEU LYS VAL HIS MET SEQRES 5 F 87 ARG LYS HIS THR GLY GLU LYS PRO TYR LEU CYS GLN GLN SEQRES 6 F 87 CYS GLY ALA ALA PHE ALA HIS ASN TYR ASP LEU LYS ASN SEQRES 7 F 87 HIS MET ARG VAL HIS THR GLY LEU ARG HET ZN G 501 1 HET ZN G 502 1 HET ZN G 503 1 HET ZN F 501 1 HETNAM ZN ZINC ION FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *23(H2 O) HELIX 1 AA1 LYS G 396 GLY G 406 1 11 HELIX 2 AA2 ARG G 421 MET G 429 1 9 HELIX 3 AA3 MET G 429 GLY G 434 1 6 HELIX 4 AA4 HIS G 449 MET G 457 1 9 HELIX 5 AA5 ARG G 458 HIS G 460 5 3 HELIX 6 AA6 HIS F 449 MET F 457 1 9 SHEET 1 AA1 2 MET G 381 LYS G 383 0 SHEET 2 AA1 2 VAL G 390 GLN G 392 -1 O ILE G 391 N GLN G 382 SHEET 1 AA2 2 TYR G 410 GLU G 411 0 SHEET 2 AA2 2 ARG G 418 PHE G 419 -1 O PHE G 419 N TYR G 410 SHEET 1 AA3 2 TYR G 438 LEU G 439 0 SHEET 2 AA3 2 ALA G 446 PHE G 447 -1 O PHE G 447 N TYR G 438 SHEET 1 AA4 2 TYR F 438 LEU F 439 0 SHEET 2 AA4 2 ALA F 446 PHE F 447 -1 O PHE F 447 N TYR F 438 LINK SG CYS G 384 ZN ZN G 501 1555 1555 2.26 LINK SG CYS G 387 ZN ZN G 501 1555 1555 2.32 LINK NE2 HIS G 400 ZN ZN G 501 1555 1555 2.04 LINK NE2 HIS G 404 ZN ZN G 501 1555 1555 2.02 LINK SG CYS G 412 ZN ZN G 502 1555 1555 2.27 LINK SG CYS G 415 ZN ZN G 502 1555 1555 2.25 LINK NE2 HIS G 428 ZN ZN G 502 1555 1555 2.04 LINK NE2 HIS G 432 ZN ZN G 502 1555 1555 2.02 LINK SG CYS G 440 ZN ZN G 503 1555 1555 2.28 LINK SG CYS G 443 ZN ZN G 503 1555 1555 2.28 LINK NE2 HIS G 456 ZN ZN G 503 1555 1555 1.99 LINK NE2 HIS G 460 ZN ZN G 503 1555 1555 2.07 LINK SG CYS F 440 ZN ZN F 501 1555 1555 2.32 LINK SG CYS F 443 ZN ZN F 501 1555 1555 2.30 LINK NE2 HIS F 456 ZN ZN F 501 1555 1555 2.07 LINK NE2 HIS F 460 ZN ZN F 501 1555 1555 2.07 CRYST1 63.542 63.542 201.586 90.00 90.00 120.00 P 65 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015738 0.009086 0.000000 0.00000 SCALE2 0.000000 0.018172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004961 0.00000