data_8HB5 # _entry.id 8HB5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HB5 pdb_00008hb5 10.2210/pdb8hb5/pdb WWPDB D_1300033197 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HB5 _pdbx_database_status.recvd_initial_deposition_date 2022-10-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ishizuka, S.' 1 0000-0003-1832-0881 'Nagae, M.' 2 0000-0002-5470-3807 'Yamasaki, S.' 3 0000-0002-5184-6917 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Acs Cent.Sci.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2374-7951 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 1388 _citation.page_last 1399 _citation.title 'PGL-III, a Rare Intermediate of Mycobacterium leprae Phenolic Glycolipid Biosynthesis, Is a Potent Mincle Ligand.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acscentsci.3c00040 _citation.pdbx_database_id_PubMed 37521780 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ishizuka, S.' 1 ? primary 'van Dijk, J.H.M.' 2 ? primary 'Kawakita, T.' 3 ? primary 'Miyamoto, Y.' 4 ? primary 'Maeda, Y.' 5 ? primary 'Goto, M.' 6 ? primary 'Le Calvez, G.' 7 ? primary 'Groot, L.M.' 8 ? primary 'Witte, M.D.' 9 0000-0003-4660-2974 primary 'Minnaard, A.J.' 10 0000-0002-5966-1300 primary 'van der Marel, G.A.' 11 ? primary 'Ato, M.' 12 ? primary 'Nagae, M.' 13 ? primary 'Codee, J.D.C.' 14 0000-0003-3531-2138 primary 'Yamasaki, S.' 15 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8HB5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 97.515 _cell.length_a_esd ? _cell.length_b 97.515 _cell.length_b_esd ? _cell.length_c 46.490 _cell.length_c_esd ? _cell.volume 382853.858 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HB5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-type lectin domain family 4 member E' 17443.527 1 ? I174T ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 3 non-polymer syn '(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol' 194.182 1 ? ? ? ? 4 water nat water 18.015 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSAELSCYNDGSGSVKNCCPLKWFHFQSSCYLFSPDTMSWRASLKNCSSMGAHLVVINTQEEQEFLYYTKPRKKEFYIGL TDQVTEGQWQWVDGTPFTKSLSFWDAGEPNNLVTVEDCATIRDSSNPRQNWNDVPCFFNMFRVCEMPERKI ; _entity_poly.pdbx_seq_one_letter_code_can ;GSAELSCYNDGSGSVKNCCPLKWFHFQSSCYLFSPDTMSWRASLKNCSSMGAHLVVINTQEEQEFLYYTKPRKKEFYIGL TDQVTEGQWQWVDGTPFTKSLSFWDAGEPNNLVTVEDCATIRDSSNPRQNWNDVPCFFNMFRVCEMPERKI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 GLU n 1 5 LEU n 1 6 SER n 1 7 CYS n 1 8 TYR n 1 9 ASN n 1 10 ASP n 1 11 GLY n 1 12 SER n 1 13 GLY n 1 14 SER n 1 15 VAL n 1 16 LYS n 1 17 ASN n 1 18 CYS n 1 19 CYS n 1 20 PRO n 1 21 LEU n 1 22 LYS n 1 23 TRP n 1 24 PHE n 1 25 HIS n 1 26 PHE n 1 27 GLN n 1 28 SER n 1 29 SER n 1 30 CYS n 1 31 TYR n 1 32 LEU n 1 33 PHE n 1 34 SER n 1 35 PRO n 1 36 ASP n 1 37 THR n 1 38 MET n 1 39 SER n 1 40 TRP n 1 41 ARG n 1 42 ALA n 1 43 SER n 1 44 LEU n 1 45 LYS n 1 46 ASN n 1 47 CYS n 1 48 SER n 1 49 SER n 1 50 MET n 1 51 GLY n 1 52 ALA n 1 53 HIS n 1 54 LEU n 1 55 VAL n 1 56 VAL n 1 57 ILE n 1 58 ASN n 1 59 THR n 1 60 GLN n 1 61 GLU n 1 62 GLU n 1 63 GLN n 1 64 GLU n 1 65 PHE n 1 66 LEU n 1 67 TYR n 1 68 TYR n 1 69 THR n 1 70 LYS n 1 71 PRO n 1 72 ARG n 1 73 LYS n 1 74 LYS n 1 75 GLU n 1 76 PHE n 1 77 TYR n 1 78 ILE n 1 79 GLY n 1 80 LEU n 1 81 THR n 1 82 ASP n 1 83 GLN n 1 84 VAL n 1 85 THR n 1 86 GLU n 1 87 GLY n 1 88 GLN n 1 89 TRP n 1 90 GLN n 1 91 TRP n 1 92 VAL n 1 93 ASP n 1 94 GLY n 1 95 THR n 1 96 PRO n 1 97 PHE n 1 98 THR n 1 99 LYS n 1 100 SER n 1 101 LEU n 1 102 SER n 1 103 PHE n 1 104 TRP n 1 105 ASP n 1 106 ALA n 1 107 GLY n 1 108 GLU n 1 109 PRO n 1 110 ASN n 1 111 ASN n 1 112 LEU n 1 113 VAL n 1 114 THR n 1 115 VAL n 1 116 GLU n 1 117 ASP n 1 118 CYS n 1 119 ALA n 1 120 THR n 1 121 ILE n 1 122 ARG n 1 123 ASP n 1 124 SER n 1 125 SER n 1 126 ASN n 1 127 PRO n 1 128 ARG n 1 129 GLN n 1 130 ASN n 1 131 TRP n 1 132 ASN n 1 133 ASP n 1 134 VAL n 1 135 PRO n 1 136 CYS n 1 137 PHE n 1 138 PHE n 1 139 ASN n 1 140 MET n 1 141 PHE n 1 142 ARG n 1 143 VAL n 1 144 CYS n 1 145 GLU n 1 146 MET n 1 147 PRO n 1 148 GLU n 1 149 ARG n 1 150 LYS n 1 151 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 151 _entity_src_gen.gene_src_common_name cattle _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CLEC4E _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code E1BHM0_BOVIN _struct_ref.pdbx_db_accession E1BHM0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ELSCYNDGSGSVKNCCPLKWFHFQSSCYLFSPDTMSWRASLKNCSSMGAHLVVINTQEEQEFLYYTKPRKKEFYIGLTDQ VTEGQWQWVDGTPFTKSLSFWDAGEPNNLVIVEDCATIRDSSNPRQNWNDVPCFFNMFRVCEMPERKI ; _struct_ref.pdbx_align_begin 64 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8HB5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 151 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession E1BHM0 _struct_ref_seq.db_align_beg 64 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 211 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 64 _struct_ref_seq.pdbx_auth_seq_align_end 211 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8HB5 GLY A 1 ? UNP E1BHM0 ? ? 'expression tag' 61 1 1 8HB5 SER A 2 ? UNP E1BHM0 ? ? 'expression tag' 62 2 1 8HB5 ALA A 3 ? UNP E1BHM0 ? ? 'expression tag' 63 3 1 8HB5 THR A 114 ? UNP E1BHM0 ILE 174 'engineered mutation' 174 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L6N D-saccharide . '(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol' ? 'C7 H14 O6' 194.182 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HB5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M immidazole (pH 8.0), 0.2M sodium acetate trihydrate, 10% PEG8,000' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt _diffrn.pdbx_serial_crystal_experiment ? 95 ? ? 1 ? ? ? 1 ? ? ? ? ? ? N ? 95 ? ? 1 ? ? ? 2 ? ? ? ? ? ? N # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date _diffrn_detector.pdbx_frequency ? PIXEL 1 'DECTRIS EIGER X 4M' ? ? ? ? 2022-06-04 ? ? PIXEL 2 'DECTRIS EIGER X 16M' ? ? ? ? 2022-06-17 ? # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? 'Si(1 1 1)' ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? 'Si (1 1 1)' ? ? ? ? ? 2 M ? ? 'SINGLE WAVELENGTH' ? x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0344 1.0 2 1 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? SYNCHROTRON ? 'PHOTON FACTORY BEAMLINE BL-1A' ? ? 1.0344 ? BL-1A 'Photon Factory' ? ? 2 ? ? SYNCHROTRON ? 'PHOTON FACTORY BEAMLINE BL-17A' ? ? 1 ? BL-17A 'Photon Factory' # _reflns.B_iso_Wilson_estimate 47.03 _reflns.entry_id 8HB5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 48.76 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8053 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 50.3 _reflns.pdbx_Rmerge_I_obs 0.379 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 14.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.054 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.72 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 8053 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.705 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 50.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.53 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_CC_half 0.878 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 50.94 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8HB5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.60 _refine.ls_d_res_low 48.76 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8053 _refine.ls_number_reflns_R_free 422 _refine.ls_number_reflns_R_work 7631 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.89 _refine.ls_percent_reflns_R_free 5.24 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2977 _refine.ls_R_factor_R_free 0.3356 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2956 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4ZRW _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 38.8575 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.3322 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 48.76 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 1213 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1194 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0024 ? 1242 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5274 ? 1685 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0374 ? 175 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0075 ? 216 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 5.1774 ? 155 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.60 2.98 . . 124 2508 99.77 . . . 0.3591 . 0.3490 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.98 3.75 . . 150 2521 100.00 . . . 0.3286 . 0.2994 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.75 48.76 . . 148 2602 99.89 . . . 0.3327 . 0.2801 . . . . . . . . . . . # _struct.entry_id 8HB5 _struct.title 'Crystal structure of Mincle in complex with HD-275' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HB5 _struct_keywords.text 'Innate immunity, C-type lectin receptors, Mycobacterium leprae, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 39 ? MET A 50 ? SER A 99 MET A 110 1 ? 12 HELX_P HELX_P2 AA2 THR A 59 ? LYS A 70 ? THR A 119 LYS A 130 1 ? 12 HELX_P HELX_P3 AA3 THR A 98 ? SER A 102 ? THR A 158 SER A 162 5 ? 5 HELX_P HELX_P4 AA4 ASN A 111 ? VAL A 115 ? ASN A 171 VAL A 175 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 18 SG ? ? A CYS 67 A CYS 78 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 19 SG ? ? ? 1_555 A CYS 30 SG ? ? A CYS 79 A CYS 90 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf3 disulf ? ? A CYS 47 SG ? ? ? 1_555 A CYS 144 SG ? ? A CYS 107 A CYS 204 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf4 disulf ? ? A CYS 118 SG ? ? ? 1_555 A CYS 136 SG ? ? A CYS 178 A CYS 196 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc1 metalc ? ? A VAL 56 O ? ? ? 1_555 D CA . CA ? ? A VAL 116 A CA 1003 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc2 metalc ? ? A ASN 58 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 118 A CA 1003 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc3 metalc ? ? A GLU 62 OE1 ? ? ? 1_555 D CA . CA ? ? A GLU 122 A CA 1003 1_555 ? ? ? ? ? ? ? 2.750 ? ? metalc4 metalc ? ? A GLU 62 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 122 A CA 1003 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc5 metalc ? ? A ASP 82 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 142 A CA 1002 1_555 ? ? ? ? ? ? ? 2.809 ? ? metalc6 metalc ? ? A ASP 82 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 142 A CA 1002 1_555 ? ? ? ? ? ? ? 2.822 ? ? metalc7 metalc ? ? A GLU 86 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 146 A CA 1002 1_555 ? ? ? ? ? ? ? 3.052 ? ? metalc8 metalc ? ? A GLU 86 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 146 A CA 1002 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc9 metalc ? ? A GLU 108 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 168 A CA 1001 1_555 ? ? ? ? ? ? ? 2.416 ? ? metalc10 metalc ? ? A ASN 110 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 170 A CA 1001 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc11 metalc ? ? A ASN 111 OD1 ? ? ? 1_555 C CA . CA ? ? A ASN 171 A CA 1002 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc12 metalc ? ? A GLU 116 OE1 ? ? ? 1_555 B CA . CA ? ? A GLU 176 A CA 1001 1_555 ? ? ? ? ? ? ? 2.500 ? ? metalc13 metalc ? ? A GLU 116 O ? ? ? 1_555 C CA . CA ? ? A GLU 176 A CA 1002 1_555 ? ? ? ? ? ? ? 2.353 ? ? metalc14 metalc ? ? A ASP 117 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 177 A CA 1002 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc15 metalc ? ? A ASN 132 OD1 ? ? ? 1_555 B CA . CA ? ? A ASN 192 A CA 1001 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc16 metalc ? ? A ASP 133 O ? ? ? 1_555 B CA . CA ? ? A ASP 193 A CA 1001 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc17 metalc ? ? A ASP 133 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 193 A CA 1001 1_555 ? ? ? ? ? ? ? 2.383 ? ? metalc18 metalc ? ? A GLU 145 OE1 ? ? ? 1_555 D CA . CA ? ? A GLU 205 A CA 1003 1_555 ? ? ? ? ? ? ? 2.769 ? ? metalc19 metalc ? ? A GLU 145 OE2 ? ? ? 1_555 D CA . CA ? ? A GLU 205 A CA 1003 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc20 metalc ? ? B CA . CA ? ? ? 1_555 E L6N . O3 ? ? A CA 1001 A L6N 1004 1_555 ? ? ? ? ? ? ? 3.063 ? ? metalc21 metalc ? ? B CA . CA ? ? ? 1_555 E L6N . O4 ? ? A CA 1001 A L6N 1004 1_555 ? ? ? ? ? ? ? 2.396 ? ? metalc22 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 1003 A HOH 1102 1_555 ? ? ? ? ? ? ? 2.453 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 108 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 168 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 109 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 169 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.91 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 5 ? ASN A 9 ? LEU A 65 ASN A 69 AA1 2 LYS A 16 ? PRO A 20 ? LYS A 76 PRO A 80 AA2 1 PHE A 24 ? PHE A 26 ? PHE A 84 PHE A 86 AA2 2 SER A 29 ? PHE A 33 ? SER A 89 PHE A 93 AA2 3 PHE A 141 ? PRO A 147 ? PHE A 201 PRO A 207 AA2 4 PHE A 76 ? THR A 81 ? PHE A 136 THR A 141 AA2 5 GLN A 90 ? TRP A 91 ? GLN A 150 TRP A 151 AA3 1 HIS A 53 ? LEU A 54 ? HIS A 113 LEU A 114 AA3 2 PHE A 141 ? PRO A 147 ? PHE A 201 PRO A 207 AA3 3 PHE A 76 ? THR A 81 ? PHE A 136 THR A 141 AA3 4 CYS A 118 ? ILE A 121 ? CYS A 178 ILE A 181 AA3 5 TRP A 131 ? VAL A 134 ? TRP A 191 VAL A 194 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 6 ? N SER A 66 O CYS A 19 ? O CYS A 79 AA2 1 2 N PHE A 24 ? N PHE A 84 O TYR A 31 ? O TYR A 91 AA2 2 3 N CYS A 30 ? N CYS A 90 O MET A 146 ? O MET A 206 AA2 3 4 O PHE A 141 ? O PHE A 201 N TYR A 77 ? N TYR A 137 AA2 4 5 N THR A 81 ? N THR A 141 O GLN A 90 ? O GLN A 150 AA3 1 2 N HIS A 53 ? N HIS A 113 O GLU A 145 ? O GLU A 205 AA3 2 3 O PHE A 141 ? O PHE A 201 N TYR A 77 ? N TYR A 137 AA3 3 4 N LEU A 80 ? N LEU A 140 O ALA A 119 ? O ALA A 179 AA3 4 5 N THR A 120 ? N THR A 180 O ASN A 132 ? O ASN A 192 # _atom_sites.entry_id 8HB5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010255 _atom_sites.fract_transf_matrix[1][2] 0.005921 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011841 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021510 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CA ? ? 16.26893 3.65395 ? ? 3.58509 77.28589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 61 ? ? ? A . n A 1 2 SER 2 62 ? ? ? A . n A 1 3 ALA 3 63 63 ALA ALA A . n A 1 4 GLU 4 64 64 GLU GLU A . n A 1 5 LEU 5 65 65 LEU LEU A . n A 1 6 SER 6 66 66 SER SER A . n A 1 7 CYS 7 67 67 CYS CYS A . n A 1 8 TYR 8 68 68 TYR TYR A . n A 1 9 ASN 9 69 69 ASN ASN A . n A 1 10 ASP 10 70 70 ASP ASP A . n A 1 11 GLY 11 71 ? ? ? A . n A 1 12 SER 12 72 ? ? ? A . n A 1 13 GLY 13 73 73 GLY GLY A . n A 1 14 SER 14 74 74 SER SER A . n A 1 15 VAL 15 75 75 VAL VAL A . n A 1 16 LYS 16 76 76 LYS LYS A . n A 1 17 ASN 17 77 77 ASN ASN A . n A 1 18 CYS 18 78 78 CYS CYS A . n A 1 19 CYS 19 79 79 CYS CYS A . n A 1 20 PRO 20 80 80 PRO PRO A . n A 1 21 LEU 21 81 81 LEU LEU A . n A 1 22 LYS 22 82 82 LYS LYS A . n A 1 23 TRP 23 83 83 TRP TRP A . n A 1 24 PHE 24 84 84 PHE PHE A . n A 1 25 HIS 25 85 85 HIS HIS A . n A 1 26 PHE 26 86 86 PHE PHE A . n A 1 27 GLN 27 87 87 GLN GLN A . n A 1 28 SER 28 88 88 SER SER A . n A 1 29 SER 29 89 89 SER SER A . n A 1 30 CYS 30 90 90 CYS CYS A . n A 1 31 TYR 31 91 91 TYR TYR A . n A 1 32 LEU 32 92 92 LEU LEU A . n A 1 33 PHE 33 93 93 PHE PHE A . n A 1 34 SER 34 94 94 SER SER A . n A 1 35 PRO 35 95 95 PRO PRO A . n A 1 36 ASP 36 96 96 ASP ASP A . n A 1 37 THR 37 97 97 THR THR A . n A 1 38 MET 38 98 98 MET MET A . n A 1 39 SER 39 99 99 SER SER A . n A 1 40 TRP 40 100 100 TRP TRP A . n A 1 41 ARG 41 101 101 ARG ARG A . n A 1 42 ALA 42 102 102 ALA ALA A . n A 1 43 SER 43 103 103 SER SER A . n A 1 44 LEU 44 104 104 LEU LEU A . n A 1 45 LYS 45 105 105 LYS LYS A . n A 1 46 ASN 46 106 106 ASN ASN A . n A 1 47 CYS 47 107 107 CYS CYS A . n A 1 48 SER 48 108 108 SER SER A . n A 1 49 SER 49 109 109 SER SER A . n A 1 50 MET 50 110 110 MET MET A . n A 1 51 GLY 51 111 111 GLY GLY A . n A 1 52 ALA 52 112 112 ALA ALA A . n A 1 53 HIS 53 113 113 HIS HIS A . n A 1 54 LEU 54 114 114 LEU LEU A . n A 1 55 VAL 55 115 115 VAL VAL A . n A 1 56 VAL 56 116 116 VAL VAL A . n A 1 57 ILE 57 117 117 ILE ILE A . n A 1 58 ASN 58 118 118 ASN ASN A . n A 1 59 THR 59 119 119 THR THR A . n A 1 60 GLN 60 120 120 GLN GLN A . n A 1 61 GLU 61 121 121 GLU GLU A . n A 1 62 GLU 62 122 122 GLU GLU A . n A 1 63 GLN 63 123 123 GLN GLN A . n A 1 64 GLU 64 124 124 GLU GLU A . n A 1 65 PHE 65 125 125 PHE PHE A . n A 1 66 LEU 66 126 126 LEU LEU A . n A 1 67 TYR 67 127 127 TYR TYR A . n A 1 68 TYR 68 128 128 TYR TYR A . n A 1 69 THR 69 129 129 THR THR A . n A 1 70 LYS 70 130 130 LYS LYS A . n A 1 71 PRO 71 131 131 PRO PRO A . n A 1 72 ARG 72 132 132 ARG ARG A . n A 1 73 LYS 73 133 133 LYS LYS A . n A 1 74 LYS 74 134 134 LYS LYS A . n A 1 75 GLU 75 135 135 GLU GLU A . n A 1 76 PHE 76 136 136 PHE PHE A . n A 1 77 TYR 77 137 137 TYR TYR A . n A 1 78 ILE 78 138 138 ILE ILE A . n A 1 79 GLY 79 139 139 GLY GLY A . n A 1 80 LEU 80 140 140 LEU LEU A . n A 1 81 THR 81 141 141 THR THR A . n A 1 82 ASP 82 142 142 ASP ASP A . n A 1 83 GLN 83 143 143 GLN GLN A . n A 1 84 VAL 84 144 144 VAL VAL A . n A 1 85 THR 85 145 145 THR THR A . n A 1 86 GLU 86 146 146 GLU GLU A . n A 1 87 GLY 87 147 147 GLY GLY A . n A 1 88 GLN 88 148 148 GLN GLN A . n A 1 89 TRP 89 149 149 TRP TRP A . n A 1 90 GLN 90 150 150 GLN GLN A . n A 1 91 TRP 91 151 151 TRP TRP A . n A 1 92 VAL 92 152 152 VAL VAL A . n A 1 93 ASP 93 153 153 ASP ASP A . n A 1 94 GLY 94 154 154 GLY GLY A . n A 1 95 THR 95 155 155 THR THR A . n A 1 96 PRO 96 156 156 PRO PRO A . n A 1 97 PHE 97 157 157 PHE PHE A . n A 1 98 THR 98 158 158 THR THR A . n A 1 99 LYS 99 159 159 LYS LYS A . n A 1 100 SER 100 160 160 SER SER A . n A 1 101 LEU 101 161 161 LEU LEU A . n A 1 102 SER 102 162 162 SER SER A . n A 1 103 PHE 103 163 163 PHE PHE A . n A 1 104 TRP 104 164 164 TRP TRP A . n A 1 105 ASP 105 165 165 ASP ASP A . n A 1 106 ALA 106 166 166 ALA ALA A . n A 1 107 GLY 107 167 167 GLY GLY A . n A 1 108 GLU 108 168 168 GLU GLU A . n A 1 109 PRO 109 169 169 PRO PRO A . n A 1 110 ASN 110 170 170 ASN ASN A . n A 1 111 ASN 111 171 171 ASN ASN A . n A 1 112 LEU 112 172 172 LEU LEU A . n A 1 113 VAL 113 173 173 VAL VAL A . n A 1 114 THR 114 174 174 THR THR A . n A 1 115 VAL 115 175 175 VAL VAL A . n A 1 116 GLU 116 176 176 GLU GLU A . n A 1 117 ASP 117 177 177 ASP ASP A . n A 1 118 CYS 118 178 178 CYS CYS A . n A 1 119 ALA 119 179 179 ALA ALA A . n A 1 120 THR 120 180 180 THR THR A . n A 1 121 ILE 121 181 181 ILE ILE A . n A 1 122 ARG 122 182 182 ARG ARG A . n A 1 123 ASP 123 183 183 ASP ASP A . n A 1 124 SER 124 184 184 SER SER A . n A 1 125 SER 125 185 185 SER SER A . n A 1 126 ASN 126 186 186 ASN ASN A . n A 1 127 PRO 127 187 187 PRO PRO A . n A 1 128 ARG 128 188 188 ARG ARG A . n A 1 129 GLN 129 189 189 GLN GLN A . n A 1 130 ASN 130 190 190 ASN ASN A . n A 1 131 TRP 131 191 191 TRP TRP A . n A 1 132 ASN 132 192 192 ASN ASN A . n A 1 133 ASP 133 193 193 ASP ASP A . n A 1 134 VAL 134 194 194 VAL VAL A . n A 1 135 PRO 135 195 195 PRO PRO A . n A 1 136 CYS 136 196 196 CYS CYS A . n A 1 137 PHE 137 197 197 PHE PHE A . n A 1 138 PHE 138 198 198 PHE PHE A . n A 1 139 ASN 139 199 199 ASN ASN A . n A 1 140 MET 140 200 200 MET MET A . n A 1 141 PHE 141 201 201 PHE PHE A . n A 1 142 ARG 142 202 202 ARG ARG A . n A 1 143 VAL 143 203 203 VAL VAL A . n A 1 144 CYS 144 204 204 CYS CYS A . n A 1 145 GLU 145 205 205 GLU GLU A . n A 1 146 MET 146 206 206 MET MET A . n A 1 147 PRO 147 207 207 PRO PRO A . n A 1 148 GLU 148 208 208 GLU GLU A . n A 1 149 ARG 149 209 209 ARG ARG A . n A 1 150 LYS 150 210 210 LYS LYS A . n A 1 151 ILE 151 211 ? ? ? A . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email yamasaki@biken.osaka-u.ac.jp _pdbx_contact_author.name_first Sho _pdbx_contact_author.name_last Yamasaki _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-5184-6917 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 1001 1001 CA CA A . C 2 CA 1 1002 1002 CA CA A . D 2 CA 1 1003 1003 CA CA A . E 3 L6N 1 1004 2001 L6N 6MG A . F 4 HOH 1 1101 3 HOH HOH A . F 4 HOH 2 1102 1 HOH HOH A . F 4 HOH 3 1103 2 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 80 ? 1 MORE -12 ? 1 'SSA (A^2)' 7880 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 73.6 ? 2 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 82.1 ? 3 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 82.7 ? 4 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 70.2 ? 5 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 121.8 ? 6 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 48.8 ? 7 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 78.8 ? 8 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 133.3 ? 9 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 129.8 ? 10 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 81.0 ? 11 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 121.4 ? 12 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 162.0 ? 13 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 108.0 ? 14 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 75.1 ? 15 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 49.9 ? 16 O ? A VAL 56 ? A VAL 116 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 102.1 ? 17 OD1 ? A ASN 58 ? A ASN 118 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 62.5 ? 18 OE1 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 141.3 ? 19 OE2 ? A GLU 62 ? A GLU 122 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 167.8 ? 20 OE1 ? A GLU 145 ? A GLU 205 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 88.3 ? 21 OE2 ? A GLU 145 ? A GLU 205 ? 1_555 CA ? D CA . ? A CA 1003 ? 1_555 O ? F HOH . ? A HOH 1102 ? 1_555 102.3 ? 22 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 45.8 ? 23 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 108.5 ? 24 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 98.9 ? 25 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 104.9 ? 26 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 67.9 ? 27 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 45.7 ? 28 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 179.2 ? 29 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 133.5 ? 30 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 71.9 ? 31 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 74.8 ? 32 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 O ? A GLU 116 ? A GLU 176 ? 1_555 109.2 ? 33 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 O ? A GLU 116 ? A GLU 176 ? 1_555 136.0 ? 34 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 O ? A GLU 116 ? A GLU 176 ? 1_555 125.1 ? 35 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 O ? A GLU 116 ? A GLU 176 ? 1_555 145.1 ? 36 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 O ? A GLU 116 ? A GLU 176 ? 1_555 70.9 ? 37 OD1 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 91.7 ? 38 OD2 ? A ASP 82 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 127.9 ? 39 OE1 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 62.6 ? 40 OE2 ? A GLU 86 ? A GLU 146 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 108.2 ? 41 OD1 ? A ASN 111 ? A ASN 171 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 89.1 ? 42 O ? A GLU 116 ? A GLU 176 ? 1_555 CA ? C CA . ? A CA 1002 ? 1_555 OD1 ? A ASP 117 ? A ASP 177 ? 1_555 78.0 ? 43 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 72.0 ? 44 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 132.0 ? 45 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 70.6 ? 46 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 71.4 ? 47 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 142.0 ? 48 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 131.3 ? 49 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A ASP 133 ? A ASP 193 ? 1_555 120.4 ? 50 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A ASP 133 ? A ASP 193 ? 1_555 124.7 ? 51 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A ASP 133 ? A ASP 193 ? 1_555 63.3 ? 52 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O ? A ASP 133 ? A ASP 193 ? 1_555 68.1 ? 53 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 69.5 ? 54 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 76.1 ? 55 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 73.1 ? 56 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 81.9 ? 57 O ? A ASP 133 ? A ASP 193 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 63.1 ? 58 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 92.7 ? 59 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 108.7 ? 60 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 127.3 ? 61 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 82.9 ? 62 O ? A ASP 133 ? A ASP 193 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 122.7 ? 63 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O3 ? E L6N . ? A L6N 1004 ? 1_555 159.6 ? 64 OE1 ? A GLU 108 ? A GLU 168 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 153.5 ? 65 OD1 ? A ASN 110 ? A ASN 170 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 123.1 ? 66 OE1 ? A GLU 116 ? A GLU 176 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 74.2 ? 67 OD1 ? A ASN 132 ? A ASN 192 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 94.5 ? 68 O ? A ASP 133 ? A ASP 193 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 71.3 ? 69 OD1 ? A ASP 133 ? A ASP 193 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 132.1 ? 70 O3 ? E L6N . ? A L6N 1004 ? 1_555 CA ? B CA . ? A CA 1001 ? 1_555 O4 ? E L6N . ? A L6N 1004 ? 1_555 62.7 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 35.4932986743 _pdbx_refine_tls.origin_y -36.0251419166 _pdbx_refine_tls.origin_z 2.45773564601 _pdbx_refine_tls.T[1][1] 0.199623709961 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0433676605767 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0258991888874 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.326458290373 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0292466545628 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.240580845433 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 2.61170384142 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.0435322214761 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.156321219889 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.35296573143 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.0875690460847 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 2.9881279136 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.192726074349 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.17620172657 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.0766288999637 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.144518071227 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.213462549414 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.16734857929 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.215874180203 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.469060010666 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0237268847356 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 63 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id F _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id S _pdbx_refine_tls_group.end_auth_seq_id 3 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_entry_details.entry_id 8HB5 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LYS 130 ? ? O A HOH 1101 ? ? 2.07 2 1 OH A TYR 127 ? ? O A SER 184 ? ? 2.13 3 1 O A PHE 125 ? ? OG1 A THR 129 ? ? 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 87 ? ? 55.41 -129.75 2 1 THR A 174 ? ? 58.87 13.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 61 ? A GLY 1 2 1 Y 1 A SER 62 ? A SER 2 3 1 Y 1 A GLY 71 ? A GLY 11 4 1 Y 1 A SER 72 ? A SER 12 5 1 Y 1 A ILE 211 ? A ILE 151 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 20H00505 1 'Japan Society for the Promotion of Science (JSPS)' Japan 20K06575 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id L6N _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id L6N _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 '(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol' L6N 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 #