data_8HC6 # _entry.id 8HC6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HC6 pdb_00008hc6 10.2210/pdb8hc6/pdb WWPDB D_1300033314 ? ? EMDB EMD-34653 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'SARS-CoV-2 Omicron BA.1 spike trimer with in complex with YB9-258 Fab, focused refinement of Fab region' _pdbx_database_related.db_id EMD-34653 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HC6 _pdbx_database_status.recvd_initial_deposition_date 2022-11-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, B.' 1 ? 'Gao, X.' 2 0000-0002-0602-4690 'Chen, Q.' 3 ? 'Li, Z.' 4 ? 'Su, M.' 5 ? 'He, J.' 6 0000-0003-0270-9729 'Xiong, X.' 7 0000-0002-4632-9122 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 1058 _citation.page_last 1058 _citation.title 'Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-36761-0 _citation.pdbx_database_id_PubMed 36828833 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yu, H.' 1 0000-0002-1757-1411 primary 'Liu, B.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Gao, X.' 4 0000-0002-0602-4690 primary 'Wang, Q.' 5 ? primary 'Xiang, H.' 6 ? primary 'Peng, X.' 7 ? primary 'Xie, C.' 8 ? primary 'Wang, Y.' 9 ? primary 'Hu, P.' 10 ? primary 'Shi, J.' 11 0000-0003-3019-3272 primary 'Shi, Q.' 12 ? primary 'Zheng, P.' 13 ? primary 'Feng, C.' 14 ? primary 'Tang, G.' 15 ? primary 'Liu, X.' 16 ? primary 'Guo, L.' 17 ? primary 'Lin, X.' 18 ? primary 'Li, J.' 19 ? primary 'Liu, C.' 20 0000-0003-2258-0897 primary 'Huang, Y.' 21 ? primary 'Yang, N.' 22 ? primary 'Chen, Q.' 23 ? primary 'Li, Z.' 24 ? primary 'Su, M.' 25 ? primary 'Yan, Q.' 26 ? primary 'Pei, R.' 27 ? primary 'Chen, X.' 28 0000-0002-4052-8155 primary 'Liu, L.' 29 0000-0002-5828-5542 primary 'Hu, F.' 30 ? primary 'Liang, D.' 31 ? primary 'Ke, B.' 32 ? primary 'Ke, C.' 33 ? primary 'Li, F.' 34 0000-0003-3169-6349 primary 'He, J.' 35 0000-0003-0270-9729 primary 'Wang, M.' 36 0000-0003-4249-6254 primary 'Chen, L.' 37 0000-0003-1485-1626 primary 'Xiong, X.' 38 0000-0002-4632-9122 primary 'Tang, X.' 39 0000-0002-5067-659X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8HC6 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HC6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 30244.215 1 ? ? ? ? 2 polymer man 'Heavy chain of YB9-258 Fab' 23126.922 1 ? ? ? ? 3 polymer man 'Light chain of YB9-258' 23177.754 1 ? ? ? ? 4 polymer man 'Spike protein S1' 31138.100 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 7 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCN GVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; ;PTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCN GVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; C ? 2 'polypeptide(L)' no no ;EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMHWVRQAPGKGLEWVSVLYAGGSAFYADSVKGRFTISRNNSKNTLYL QMNSLRAEDTAIYYCARGLGDYLDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD ; ;EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMHWVRQAPGKGLEWVSVLYAGGSAFYADSVKGRFTISRNNSKNTLYL QMNSLRAEDTAIYYCARGLGDYLDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD ; H ? 3 'polypeptide(L)' no no ;DIQMTQSPSSVSASVGDRVTITCRASQGIGSWLAWYQQKPGKAPQLLIYAASTLQSGVPPRFSGSGSGTDFTLTITSLQP EDFASYYCQQANSVLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;DIQMTQSPSSVSASVGDRVTITCRASQGIGSWLAWYQQKPGKAPQLLIYAASTLQSGVPPRFSGSGSGTDFTLTITSLQP EDFASYYCQQANSVLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS QESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; L ? 4 'polypeptide(L)' no no ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASI EKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSS GWTAGAAAYYVGYLQPRTFLLKYNENGTITDAV ; ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASI EKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMD LEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSS GWTAGAAAYYVGYLQPRTFLLKYNENGTITDAV ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 THR n 1 3 GLU n 1 4 SER n 1 5 ILE n 1 6 VAL n 1 7 ARG n 1 8 PHE n 1 9 PRO n 1 10 ASN n 1 11 ILE n 1 12 THR n 1 13 ASN n 1 14 LEU n 1 15 CYS n 1 16 PRO n 1 17 PHE n 1 18 ASP n 1 19 GLU n 1 20 VAL n 1 21 PHE n 1 22 ASN n 1 23 ALA n 1 24 THR n 1 25 ARG n 1 26 PHE n 1 27 ALA n 1 28 SER n 1 29 VAL n 1 30 TYR n 1 31 ALA n 1 32 TRP n 1 33 ASN n 1 34 ARG n 1 35 LYS n 1 36 ARG n 1 37 ILE n 1 38 SER n 1 39 ASN n 1 40 CYS n 1 41 VAL n 1 42 ALA n 1 43 ASP n 1 44 TYR n 1 45 SER n 1 46 VAL n 1 47 LEU n 1 48 TYR n 1 49 ASN n 1 50 LEU n 1 51 ALA n 1 52 PRO n 1 53 PHE n 1 54 PHE n 1 55 THR n 1 56 PHE n 1 57 LYS n 1 58 CYS n 1 59 TYR n 1 60 GLY n 1 61 VAL n 1 62 SER n 1 63 PRO n 1 64 THR n 1 65 LYS n 1 66 LEU n 1 67 ASN n 1 68 ASP n 1 69 LEU n 1 70 CYS n 1 71 PHE n 1 72 THR n 1 73 ASN n 1 74 VAL n 1 75 TYR n 1 76 ALA n 1 77 ASP n 1 78 SER n 1 79 PHE n 1 80 VAL n 1 81 ILE n 1 82 ARG n 1 83 GLY n 1 84 ASP n 1 85 GLU n 1 86 VAL n 1 87 ARG n 1 88 GLN n 1 89 ILE n 1 90 ALA n 1 91 PRO n 1 92 GLY n 1 93 GLN n 1 94 THR n 1 95 GLY n 1 96 ASN n 1 97 ILE n 1 98 ALA n 1 99 ASP n 1 100 TYR n 1 101 ASN n 1 102 TYR n 1 103 LYS n 1 104 LEU n 1 105 PRO n 1 106 ASP n 1 107 ASP n 1 108 PHE n 1 109 THR n 1 110 GLY n 1 111 CYS n 1 112 VAL n 1 113 ILE n 1 114 ALA n 1 115 TRP n 1 116 ASN n 1 117 SER n 1 118 ASN n 1 119 LYS n 1 120 LEU n 1 121 ASP n 1 122 SER n 1 123 LYS n 1 124 VAL n 1 125 SER n 1 126 GLY n 1 127 ASN n 1 128 TYR n 1 129 ASN n 1 130 TYR n 1 131 LEU n 1 132 TYR n 1 133 ARG n 1 134 LEU n 1 135 PHE n 1 136 ARG n 1 137 LYS n 1 138 SER n 1 139 ASN n 1 140 LEU n 1 141 LYS n 1 142 PRO n 1 143 PHE n 1 144 GLU n 1 145 ARG n 1 146 ASP n 1 147 ILE n 1 148 SER n 1 149 THR n 1 150 GLU n 1 151 ILE n 1 152 TYR n 1 153 GLN n 1 154 ALA n 1 155 GLY n 1 156 ASN n 1 157 LYS n 1 158 PRO n 1 159 CYS n 1 160 ASN n 1 161 GLY n 1 162 VAL n 1 163 ALA n 1 164 GLY n 1 165 PHE n 1 166 ASN n 1 167 CYS n 1 168 TYR n 1 169 PHE n 1 170 PRO n 1 171 LEU n 1 172 ARG n 1 173 SER n 1 174 TYR n 1 175 SER n 1 176 PHE n 1 177 ARG n 1 178 PRO n 1 179 THR n 1 180 TYR n 1 181 GLY n 1 182 VAL n 1 183 GLY n 1 184 HIS n 1 185 GLN n 1 186 PRO n 1 187 TYR n 1 188 ARG n 1 189 VAL n 1 190 VAL n 1 191 VAL n 1 192 LEU n 1 193 SER n 1 194 PHE n 1 195 GLU n 1 196 LEU n 1 197 LEU n 1 198 HIS n 1 199 ALA n 1 200 PRO n 1 201 ALA n 1 202 THR n 1 203 VAL n 1 204 CYS n 1 205 GLY n 1 206 PRO n 1 207 LYS n 1 208 LYS n 1 209 SER n 1 210 THR n 1 211 ASN n 1 212 LEU n 1 213 VAL n 1 214 LYS n 1 215 ASN n 1 216 LYS n 1 217 CYS n 1 218 VAL n 1 219 ASN n 1 220 PHE n 1 221 ASN n 1 222 PHE n 1 223 ASN n 1 224 GLY n 1 225 LEU n 1 226 LYS n 1 227 GLY n 1 228 THR n 1 229 GLY n 1 230 VAL n 1 231 LEU n 1 232 THR n 1 233 GLU n 1 234 SER n 1 235 ASN n 1 236 LYS n 1 237 LYS n 1 238 PHE n 1 239 LEU n 1 240 PRO n 1 241 PHE n 1 242 GLN n 1 243 GLN n 1 244 PHE n 1 245 GLY n 1 246 ARG n 1 247 ASP n 1 248 ILE n 1 249 ALA n 1 250 ASP n 1 251 THR n 1 252 THR n 1 253 ASP n 1 254 ALA n 1 255 VAL n 1 256 ARG n 1 257 ASP n 1 258 PRO n 1 259 GLN n 1 260 THR n 1 261 LEU n 1 262 GLU n 1 263 ILE n 1 264 LEU n 1 265 ASP n 1 266 ILE n 1 267 THR n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 ILE n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 LEU n 2 28 THR n 2 29 VAL n 2 30 SER n 2 31 SER n 2 32 ASN n 2 33 TYR n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 SER n 2 50 VAL n 2 51 LEU n 2 52 TYR n 2 53 ALA n 2 54 GLY n 2 55 GLY n 2 56 SER n 2 57 ALA n 2 58 PHE n 2 59 TYR n 2 60 ALA n 2 61 ASP n 2 62 SER n 2 63 VAL n 2 64 LYS n 2 65 GLY n 2 66 ARG n 2 67 PHE n 2 68 THR n 2 69 ILE n 2 70 SER n 2 71 ARG n 2 72 ASN n 2 73 ASN n 2 74 SER n 2 75 LYS n 2 76 ASN n 2 77 THR n 2 78 LEU n 2 79 TYR n 2 80 LEU n 2 81 GLN n 2 82 MET n 2 83 ASN n 2 84 SER n 2 85 LEU n 2 86 ARG n 2 87 ALA n 2 88 GLU n 2 89 ASP n 2 90 THR n 2 91 ALA n 2 92 ILE n 2 93 TYR n 2 94 TYR n 2 95 CYS n 2 96 ALA n 2 97 ARG n 2 98 GLY n 2 99 LEU n 2 100 GLY n 2 101 ASP n 2 102 TYR n 2 103 LEU n 2 104 ASP n 2 105 SER n 2 106 TRP n 2 107 GLY n 2 108 GLN n 2 109 GLY n 2 110 THR n 2 111 LEU n 2 112 VAL n 2 113 THR n 2 114 VAL n 2 115 SER n 2 116 SER n 2 117 ALA n 2 118 SER n 2 119 THR n 2 120 LYS n 2 121 GLY n 2 122 PRO n 2 123 SER n 2 124 VAL n 2 125 PHE n 2 126 PRO n 2 127 LEU n 2 128 ALA n 2 129 PRO n 2 130 SER n 2 131 SER n 2 132 LYS n 2 133 SER n 2 134 THR n 2 135 SER n 2 136 GLY n 2 137 GLY n 2 138 THR n 2 139 ALA n 2 140 ALA n 2 141 LEU n 2 142 GLY n 2 143 CYS n 2 144 LEU n 2 145 VAL n 2 146 LYS n 2 147 ASP n 2 148 TYR n 2 149 PHE n 2 150 PRO n 2 151 GLU n 2 152 PRO n 2 153 VAL n 2 154 THR n 2 155 VAL n 2 156 SER n 2 157 TRP n 2 158 ASN n 2 159 SER n 2 160 GLY n 2 161 ALA n 2 162 LEU n 2 163 THR n 2 164 SER n 2 165 GLY n 2 166 VAL n 2 167 HIS n 2 168 THR n 2 169 PHE n 2 170 PRO n 2 171 ALA n 2 172 VAL n 2 173 LEU n 2 174 GLN n 2 175 SER n 2 176 SER n 2 177 GLY n 2 178 LEU n 2 179 TYR n 2 180 SER n 2 181 LEU n 2 182 SER n 2 183 SER n 2 184 VAL n 2 185 VAL n 2 186 THR n 2 187 VAL n 2 188 PRO n 2 189 SER n 2 190 SER n 2 191 SER n 2 192 LEU n 2 193 GLY n 2 194 THR n 2 195 GLN n 2 196 THR n 2 197 TYR n 2 198 ILE n 2 199 CYS n 2 200 ASN n 2 201 VAL n 2 202 ASN n 2 203 HIS n 2 204 LYS n 2 205 PRO n 2 206 SER n 2 207 ASN n 2 208 THR n 2 209 LYS n 2 210 VAL n 2 211 ASP n 2 212 LYS n 2 213 LYS n 2 214 VAL n 2 215 GLU n 2 216 PRO n 2 217 LYS n 2 218 SER n 2 219 CYS n 2 220 ASP n 3 1 ASP n 3 2 ILE n 3 3 GLN n 3 4 MET n 3 5 THR n 3 6 GLN n 3 7 SER n 3 8 PRO n 3 9 SER n 3 10 SER n 3 11 VAL n 3 12 SER n 3 13 ALA n 3 14 SER n 3 15 VAL n 3 16 GLY n 3 17 ASP n 3 18 ARG n 3 19 VAL n 3 20 THR n 3 21 ILE n 3 22 THR n 3 23 CYS n 3 24 ARG n 3 25 ALA n 3 26 SER n 3 27 GLN n 3 28 GLY n 3 29 ILE n 3 30 GLY n 3 31 SER n 3 32 TRP n 3 33 LEU n 3 34 ALA n 3 35 TRP n 3 36 TYR n 3 37 GLN n 3 38 GLN n 3 39 LYS n 3 40 PRO n 3 41 GLY n 3 42 LYS n 3 43 ALA n 3 44 PRO n 3 45 GLN n 3 46 LEU n 3 47 LEU n 3 48 ILE n 3 49 TYR n 3 50 ALA n 3 51 ALA n 3 52 SER n 3 53 THR n 3 54 LEU n 3 55 GLN n 3 56 SER n 3 57 GLY n 3 58 VAL n 3 59 PRO n 3 60 PRO n 3 61 ARG n 3 62 PHE n 3 63 SER n 3 64 GLY n 3 65 SER n 3 66 GLY n 3 67 SER n 3 68 GLY n 3 69 THR n 3 70 ASP n 3 71 PHE n 3 72 THR n 3 73 LEU n 3 74 THR n 3 75 ILE n 3 76 THR n 3 77 SER n 3 78 LEU n 3 79 GLN n 3 80 PRO n 3 81 GLU n 3 82 ASP n 3 83 PHE n 3 84 ALA n 3 85 SER n 3 86 TYR n 3 87 TYR n 3 88 CYS n 3 89 GLN n 3 90 GLN n 3 91 ALA n 3 92 ASN n 3 93 SER n 3 94 VAL n 3 95 LEU n 3 96 ALA n 3 97 LEU n 3 98 THR n 3 99 PHE n 3 100 GLY n 3 101 GLY n 3 102 GLY n 3 103 THR n 3 104 LYS n 3 105 VAL n 3 106 GLU n 3 107 ILE n 3 108 LYS n 3 109 ARG n 3 110 THR n 3 111 VAL n 3 112 ALA n 3 113 ALA n 3 114 PRO n 3 115 SER n 3 116 VAL n 3 117 PHE n 3 118 ILE n 3 119 PHE n 3 120 PRO n 3 121 PRO n 3 122 SER n 3 123 ASP n 3 124 GLU n 3 125 GLN n 3 126 LEU n 3 127 LYS n 3 128 SER n 3 129 GLY n 3 130 THR n 3 131 ALA n 3 132 SER n 3 133 VAL n 3 134 VAL n 3 135 CYS n 3 136 LEU n 3 137 LEU n 3 138 ASN n 3 139 ASN n 3 140 PHE n 3 141 TYR n 3 142 PRO n 3 143 ARG n 3 144 GLU n 3 145 ALA n 3 146 LYS n 3 147 VAL n 3 148 GLN n 3 149 TRP n 3 150 LYS n 3 151 VAL n 3 152 ASP n 3 153 ASN n 3 154 ALA n 3 155 LEU n 3 156 GLN n 3 157 SER n 3 158 GLY n 3 159 ASN n 3 160 SER n 3 161 GLN n 3 162 GLU n 3 163 SER n 3 164 VAL n 3 165 THR n 3 166 GLU n 3 167 GLN n 3 168 ASP n 3 169 SER n 3 170 LYS n 3 171 ASP n 3 172 SER n 3 173 THR n 3 174 TYR n 3 175 SER n 3 176 LEU n 3 177 SER n 3 178 SER n 3 179 THR n 3 180 LEU n 3 181 THR n 3 182 LEU n 3 183 SER n 3 184 LYS n 3 185 ALA n 3 186 ASP n 3 187 TYR n 3 188 GLU n 3 189 LYS n 3 190 HIS n 3 191 LYS n 3 192 VAL n 3 193 TYR n 3 194 ALA n 3 195 CYS n 3 196 GLU n 3 197 VAL n 3 198 THR n 3 199 HIS n 3 200 GLN n 3 201 GLY n 3 202 LEU n 3 203 SER n 3 204 SER n 3 205 PRO n 3 206 VAL n 3 207 THR n 3 208 LYS n 3 209 SER n 3 210 PHE n 3 211 ASN n 3 212 ARG n 3 213 GLY n 3 214 GLU n 3 215 CYS n 4 1 GLN n 4 2 CYS n 4 3 VAL n 4 4 ASN n 4 5 LEU n 4 6 THR n 4 7 THR n 4 8 ARG n 4 9 THR n 4 10 GLN n 4 11 LEU n 4 12 PRO n 4 13 PRO n 4 14 ALA n 4 15 TYR n 4 16 THR n 4 17 ASN n 4 18 SER n 4 19 PHE n 4 20 THR n 4 21 ARG n 4 22 GLY n 4 23 VAL n 4 24 TYR n 4 25 TYR n 4 26 PRO n 4 27 ASP n 4 28 LYS n 4 29 VAL n 4 30 PHE n 4 31 ARG n 4 32 SER n 4 33 SER n 4 34 VAL n 4 35 LEU n 4 36 HIS n 4 37 SER n 4 38 THR n 4 39 GLN n 4 40 ASP n 4 41 LEU n 4 42 PHE n 4 43 LEU n 4 44 PRO n 4 45 PHE n 4 46 PHE n 4 47 SER n 4 48 ASN n 4 49 VAL n 4 50 THR n 4 51 TRP n 4 52 PHE n 4 53 HIS n 4 54 VAL n 4 55 ILE n 4 56 SER n 4 57 GLY n 4 58 THR n 4 59 ASN n 4 60 GLY n 4 61 THR n 4 62 LYS n 4 63 ARG n 4 64 PHE n 4 65 ASP n 4 66 ASN n 4 67 PRO n 4 68 VAL n 4 69 LEU n 4 70 PRO n 4 71 PHE n 4 72 ASN n 4 73 ASP n 4 74 GLY n 4 75 VAL n 4 76 TYR n 4 77 PHE n 4 78 ALA n 4 79 SER n 4 80 ILE n 4 81 GLU n 4 82 LYS n 4 83 SER n 4 84 ASN n 4 85 ILE n 4 86 ILE n 4 87 ARG n 4 88 GLY n 4 89 TRP n 4 90 ILE n 4 91 PHE n 4 92 GLY n 4 93 THR n 4 94 THR n 4 95 LEU n 4 96 ASP n 4 97 SER n 4 98 LYS n 4 99 THR n 4 100 GLN n 4 101 SER n 4 102 LEU n 4 103 LEU n 4 104 ILE n 4 105 VAL n 4 106 ASN n 4 107 ASN n 4 108 ALA n 4 109 THR n 4 110 ASN n 4 111 VAL n 4 112 VAL n 4 113 ILE n 4 114 LYS n 4 115 VAL n 4 116 CYS n 4 117 GLU n 4 118 PHE n 4 119 GLN n 4 120 PHE n 4 121 CYS n 4 122 ASN n 4 123 ASP n 4 124 PRO n 4 125 PHE n 4 126 LEU n 4 127 ASP n 4 128 HIS n 4 129 LYS n 4 130 ASN n 4 131 ASN n 4 132 LYS n 4 133 SER n 4 134 TRP n 4 135 MET n 4 136 GLU n 4 137 SER n 4 138 GLU n 4 139 PHE n 4 140 ARG n 4 141 VAL n 4 142 TYR n 4 143 SER n 4 144 SER n 4 145 ALA n 4 146 ASN n 4 147 ASN n 4 148 CYS n 4 149 THR n 4 150 PHE n 4 151 GLU n 4 152 TYR n 4 153 VAL n 4 154 SER n 4 155 GLN n 4 156 PRO n 4 157 PHE n 4 158 LEU n 4 159 MET n 4 160 ASP n 4 161 LEU n 4 162 GLU n 4 163 GLY n 4 164 LYS n 4 165 GLN n 4 166 GLY n 4 167 ASN n 4 168 PHE n 4 169 LYS n 4 170 ASN n 4 171 LEU n 4 172 ARG n 4 173 GLU n 4 174 PHE n 4 175 VAL n 4 176 PHE n 4 177 LYS n 4 178 ASN n 4 179 ILE n 4 180 ASP n 4 181 GLY n 4 182 TYR n 4 183 PHE n 4 184 LYS n 4 185 ILE n 4 186 TYR n 4 187 SER n 4 188 LYS n 4 189 HIS n 4 190 THR n 4 191 PRO n 4 192 ILE n 4 193 ILE n 4 194 VAL n 4 195 ARG n 4 196 GLU n 4 197 PRO n 4 198 GLU n 4 199 ASP n 4 200 LEU n 4 201 PRO n 4 202 GLN n 4 203 GLY n 4 204 PHE n 4 205 SER n 4 206 ALA n 4 207 LEU n 4 208 GLU n 4 209 PRO n 4 210 LEU n 4 211 VAL n 4 212 ASP n 4 213 LEU n 4 214 PRO n 4 215 ILE n 4 216 GLY n 4 217 ILE n 4 218 ASN n 4 219 ILE n 4 220 THR n 4 221 ARG n 4 222 PHE n 4 223 GLN n 4 224 THR n 4 225 LEU n 4 226 LEU n 4 227 ALA n 4 228 LEU n 4 229 HIS n 4 230 ARG n 4 231 SER n 4 232 TYR n 4 233 LEU n 4 234 THR n 4 235 PRO n 4 236 GLY n 4 237 ASP n 4 238 SER n 4 239 SER n 4 240 SER n 4 241 GLY n 4 242 TRP n 4 243 THR n 4 244 ALA n 4 245 GLY n 4 246 ALA n 4 247 ALA n 4 248 ALA n 4 249 TYR n 4 250 TYR n 4 251 VAL n 4 252 GLY n 4 253 TYR n 4 254 LEU n 4 255 GLN n 4 256 PRO n 4 257 ARG n 4 258 THR n 4 259 PHE n 4 260 LEU n 4 261 LEU n 4 262 LYS n 4 263 TYR n 4 264 ASN n 4 265 GLU n 4 266 ASN n 4 267 GLY n 4 268 THR n 4 269 ILE n 4 270 THR n 4 271 ASP n 4 272 ALA n 4 273 VAL n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 267 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 220 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 215 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 273 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;PTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFV IRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCN GVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLP FQQFGRDIADTTDAVRDPQTLEILDIT ; 322 2 PDB 8HC6 8HC6 ? 2 ? 1 3 PDB 8HC6 8HC6 ? 3 ? 1 4 UNP SPIKE_SARS2 P0DTC2 ? 4 ;QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFA STEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQ PFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGD SSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAV ; 14 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8HC6 C 1 ? 267 ? P0DTC2 322 ? 588 ? 322 588 2 2 8HC6 H 1 ? 220 ? 8HC6 1 ? 220 ? 1 220 3 3 8HC6 L 1 ? 215 ? 8HC6 1 ? 215 ? 1 215 4 4 8HC6 B 1 ? 273 ? P0DTC2 14 ? 289 ? 14 289 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8HC6 ASP C 18 ? UNP P0DTC2 GLY 339 variant 339 1 1 8HC6 LEU C 50 ? UNP P0DTC2 SER 371 variant 371 2 1 8HC6 PRO C 52 ? UNP P0DTC2 SER 373 variant 373 3 1 8HC6 PHE C 54 ? UNP P0DTC2 SER 375 variant 375 4 1 8HC6 ASN C 96 ? UNP P0DTC2 LYS 417 variant 417 5 1 8HC6 LYS C 119 ? UNP P0DTC2 ASN 440 variant 440 6 1 8HC6 SER C 125 ? UNP P0DTC2 GLY 446 variant 446 7 1 8HC6 ASN C 156 ? UNP P0DTC2 SER 477 variant 477 8 1 8HC6 LYS C 157 ? UNP P0DTC2 THR 478 variant 478 9 1 8HC6 ALA C 163 ? UNP P0DTC2 GLU 484 variant 484 10 1 8HC6 ARG C 172 ? UNP P0DTC2 GLN 493 variant 493 11 1 8HC6 SER C 175 ? UNP P0DTC2 GLY 496 variant 496 12 1 8HC6 ARG C 177 ? UNP P0DTC2 GLN 498 variant 498 13 1 8HC6 TYR C 180 ? UNP P0DTC2 ASN 501 variant 501 14 1 8HC6 HIS C 184 ? UNP P0DTC2 TYR 505 variant 505 15 1 8HC6 LYS C 226 ? UNP P0DTC2 THR 547 variant 547 16 4 8HC6 VAL B 54 ? UNP P0DTC2 ALA 67 variant 67 17 4 8HC6 ? B ? ? UNP P0DTC2 HIS 69 deletion ? 18 4 8HC6 ? B ? ? UNP P0DTC2 VAL 70 deletion ? 19 4 8HC6 ILE B 80 ? UNP P0DTC2 THR 95 variant 95 20 4 8HC6 ASP B 127 ? UNP P0DTC2 GLY 142 conflict 142 21 4 8HC6 ? B ? ? UNP P0DTC2 VAL 143 deletion ? 22 4 8HC6 ? B ? ? UNP P0DTC2 TYR 144 deletion ? 23 4 8HC6 ? B ? ? UNP P0DTC2 TYR 145 deletion ? 24 4 8HC6 ILE B 193 A UNP P0DTC2 LEU 212 variant 210 25 4 8HC6 GLU B 196 D UNP P0DTC2 ? ? insertion 210 26 4 8HC6 PRO B 197 E UNP P0DTC2 ? ? insertion 210 27 4 8HC6 GLU B 198 F UNP P0DTC2 ? ? insertion 210 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HC6 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8HC6 _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 7557 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.537 ? 10275 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 3.326 ? 1047 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.045 ? 1167 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 1311 ? f_plane_restr ? ? # _struct.entry_id 8HC6 _struct.title 'SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with YB9-258 Fab, focused refinement of Fab region' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HC6 _struct_keywords.text 'Spike protein, RBD, Antibody, Fab, Viral protein, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 16 ? ASN A 22 ? PRO C 337 ASN C 343 1 ? 7 HELX_P HELX_P2 AA2 TYR A 44 ? ALA A 51 ? TYR C 365 ALA C 372 1 ? 8 HELX_P HELX_P3 AA3 GLY A 83 ? ARG A 87 ? GLY C 404 ARG C 408 1 ? 5 HELX_P HELX_P4 AA4 GLY A 95 ? ASN A 101 ? GLY C 416 ASN C 422 1 ? 7 HELX_P HELX_P5 AA5 SER B 159 ? ALA B 161 ? SER H 159 ALA H 161 5 ? 3 HELX_P HELX_P6 AA6 PRO B 188 ? LEU B 192 ? PRO H 188 LEU H 192 5 ? 5 HELX_P HELX_P7 AA7 LYS C 184 ? GLU C 188 ? LYS L 184 GLU L 188 1 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 15 SG ? ? ? 1_555 A CYS 40 SG ? ? C CYS 336 C CYS 361 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf2 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 111 SG ? ? C CYS 379 C CYS 432 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf3 disulf ? ? A CYS 70 SG ? ? ? 1_555 A CYS 204 SG ? ? C CYS 391 C CYS 525 1_555 ? ? ? ? ? ? ? 2.037 ? ? disulf4 disulf ? ? A CYS 159 SG ? ? ? 1_555 A CYS 167 SG ? ? C CYS 480 C CYS 488 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 95 SG ? ? H CYS 22 H CYS 95 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf6 disulf ? ? B CYS 143 SG ? ? ? 1_555 B CYS 199 SG ? ? H CYS 143 H CYS 199 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf7 disulf ? ? C CYS 23 SG ? ? ? 1_555 C CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf8 disulf ? ? C CYS 135 SG ? ? ? 1_555 C CYS 195 SG ? ? L CYS 135 L CYS 195 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf9 disulf ? ? D CYS 2 SG ? ? ? 1_555 D CYS 121 SG ? ? B CYS 15 B CYS 136 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf10 disulf ? ? D CYS 116 SG ? ? ? 1_555 D CYS 148 SG ? ? B CYS 131 B CYS 166 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale one ? A ASN 10 ND2 ? ? ? 1_555 E NAG . C1 ? ? C ASN 331 C NAG 601 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale2 covale one ? A ASN 22 ND2 ? ? ? 1_555 F NAG . C1 ? ? C ASN 343 C NAG 602 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale one ? D ASN 48 ND2 ? ? ? 1_555 G NAG . C1 ? ? B ASN 61 B NAG 1301 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale4 covale one ? D ASN 107 ND2 ? ? ? 1_555 H NAG . C1 ? ? B ASN 122 B NAG 1302 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale5 covale one ? D ASN 147 ND2 ? ? ? 1_555 I NAG . C1 ? ? B ASN 165 B NAG 1303 1_555 ? ? ? ? ? ? ? 1.455 ? N-Glycosylation covale6 covale one ? D ASN 218 ND2 ? ? ? 1_555 J NAG . C1 ? ? B ASN 234 B NAG 1304 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale7 covale one ? D ASN 266 ND2 ? ? ? 1_555 K NAG . C1 ? ? B ASN 282 B NAG 1305 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 149 B . ? PHE 149 H PRO 150 B ? PRO 150 H 1 -6.04 2 GLU 151 B . ? GLU 151 H PRO 152 B ? PRO 152 H 1 -2.86 3 TYR 141 C . ? TYR 141 L PRO 142 C ? PRO 142 L 1 1.49 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 4 ? AA6 ? 2 ? AA7 ? 4 ? AA8 ? 4 ? AA9 ? 4 ? AB1 ? 4 ? AB2 ? 3 ? AB3 ? 3 ? AB4 ? 2 ? AB5 ? 5 ? AB6 ? 4 ? AB7 ? 2 ? AB8 ? 2 ? AB9 ? 7 ? AC1 ? 2 ? AC2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB4 1 2 ? parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB5 4 5 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB7 1 2 ? anti-parallel AB8 1 2 ? anti-parallel AB9 1 2 ? anti-parallel AB9 2 3 ? anti-parallel AB9 3 4 ? anti-parallel AB9 4 5 ? anti-parallel AB9 5 6 ? anti-parallel AB9 6 7 ? anti-parallel AC1 1 2 ? anti-parallel AC2 1 2 ? parallel AC2 2 3 ? anti-parallel AC2 3 4 ? anti-parallel AC2 4 5 ? anti-parallel AC2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 35 ? ILE A 37 ? LYS C 356 ILE C 358 AA1 2 ASN A 73 ? ARG A 82 ? ASN C 394 ARG C 403 AA1 3 PRO A 186 ? GLU A 195 ? PRO C 507 GLU C 516 AA1 4 GLY A 110 ? ASN A 116 ? GLY C 431 ASN C 437 AA2 1 LEU A 131 ? ARG A 133 ? LEU C 452 ARG C 454 AA2 2 LEU A 171 ? SER A 173 ? LEU C 492 SER C 494 AA3 1 TYR A 152 ? GLN A 153 ? TYR C 473 GLN C 474 AA3 2 CYS A 167 ? TYR A 168 ? CYS C 488 TYR C 489 AA4 1 PHE A 220 ? PHE A 222 ? PHE C 541 PHE C 543 AA4 2 LEU A 225 ? GLY A 227 ? LEU C 546 GLY C 548 AA5 1 LEU B 4 ? SER B 7 ? LEU H 4 SER H 7 AA5 2 LEU B 20 ? ALA B 24 ? LEU H 20 ALA H 24 AA5 3 THR B 77 ? MET B 82 ? THR H 77 MET H 82 AA5 4 PHE B 67 ? ASN B 72 ? PHE H 67 ASN H 72 AA6 1 LEU B 11 ? ILE B 12 ? LEU H 11 ILE H 12 AA6 2 THR B 113 ? VAL B 114 ? THR H 113 VAL H 114 AA7 1 ALA B 57 ? TYR B 59 ? ALA H 57 TYR H 59 AA7 2 LEU B 45 ? LEU B 51 ? LEU H 45 LEU H 51 AA7 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA7 4 ILE B 92 ? TYR B 93 ? ILE H 92 TYR H 93 AA8 1 ALA B 57 ? TYR B 59 ? ALA H 57 TYR H 59 AA8 2 LEU B 45 ? LEU B 51 ? LEU H 45 LEU H 51 AA8 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA8 4 ALA B 96 ? ARG B 97 ? ALA H 96 ARG H 97 AA9 1 SER B 123 ? PRO B 126 ? SER H 123 PRO H 126 AA9 2 ALA B 139 ? LYS B 146 ? ALA H 139 LYS H 146 AA9 3 TYR B 179 ? VAL B 187 ? TYR H 179 VAL H 187 AA9 4 HIS B 167 ? THR B 168 ? HIS H 167 THR H 168 AB1 1 SER B 123 ? PRO B 126 ? SER H 123 PRO H 126 AB1 2 ALA B 139 ? LYS B 146 ? ALA H 139 LYS H 146 AB1 3 TYR B 179 ? VAL B 187 ? TYR H 179 VAL H 187 AB1 4 VAL B 172 ? LEU B 173 ? VAL H 172 LEU H 173 AB2 1 THR B 154 ? TRP B 157 ? THR H 154 TRP H 157 AB2 2 ILE B 198 ? ASN B 202 ? ILE H 198 ASN H 202 AB2 3 VAL B 210 ? LYS B 213 ? VAL H 210 LYS H 213 AB3 1 MET C 4 ? THR C 5 ? MET L 4 THR L 5 AB3 2 THR C 22 ? ALA C 25 ? THR L 22 ALA L 25 AB3 3 ASP C 70 ? THR C 72 ? ASP L 70 THR L 72 AB4 1 SER C 10 ? SER C 12 ? SER L 10 SER L 12 AB4 2 LYS C 104 ? GLU C 106 ? LYS L 104 GLU L 106 AB5 1 THR C 53 ? LEU C 54 ? THR L 53 LEU L 54 AB5 2 GLN C 45 ? TYR C 49 ? GLN L 45 TYR L 49 AB5 3 ALA C 34 ? GLN C 38 ? ALA L 34 GLN L 38 AB5 4 SER C 85 ? GLN C 90 ? SER L 85 GLN L 90 AB5 5 THR C 98 ? PHE C 99 ? THR L 98 PHE L 99 AB6 1 PHE C 117 ? PHE C 119 ? PHE L 117 PHE L 119 AB6 2 THR C 130 ? ASN C 138 ? THR L 130 ASN L 138 AB6 3 SER C 175 ? SER C 183 ? SER L 175 SER L 183 AB6 4 SER C 160 ? VAL C 164 ? SER L 160 VAL L 164 AB7 1 TRP C 149 ? VAL C 151 ? TRP L 149 VAL L 151 AB7 2 ALA C 154 ? GLN C 156 ? ALA L 154 GLN L 156 AB8 1 VAL C 192 ? TYR C 193 ? VAL L 192 TYR L 193 AB8 2 PHE C 210 ? ASN C 211 ? PHE L 210 ASN L 211 AB9 1 ALA D 14 ? ASN D 17 ? ALA B 27 ASN B 30 AB9 2 ASN D 48 ? VAL D 54 ? ASN B 61 VAL B 67 AB9 3 ALA D 247 ? TYR D 253 ? ALA B 263 TYR B 269 AB9 4 VAL D 75 ? ILE D 80 ? VAL B 90 ILE B 95 AB9 5 ASN D 170 ? ILE D 179 ? ASN B 188 ILE B 197 AB9 6 TYR D 182 ? PRO D 191 ? TYR B 200 PRO B 209 AB9 7 GLU D 208 ? VAL D 211 ? GLU B 224 VAL B 227 AC1 1 LEU D 35 ? GLN D 39 ? LEU B 48 GLN B 52 AC1 2 THR D 258 ? LYS D 262 ? THR B 274 LYS B 278 AC2 1 PHE D 125 ? LEU D 126 ? PHE B 140 LEU B 141 AC2 2 GLN D 223 ? ALA D 227 ? GLN B 239 ALA B 243 AC2 3 ILE D 86 ? GLY D 92 ? ILE B 101 GLY B 107 AC2 4 SER D 101 ? ASN D 106 ? SER B 116 ASN B 121 AC2 5 VAL D 111 ? VAL D 115 ? VAL B 126 VAL B 130 AC2 6 THR D 149 ? SER D 154 ? THR B 167 SER B 172 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 37 ? N ILE C 358 O VAL A 74 ? O VAL C 395 AA1 2 3 N ASP A 77 ? N ASP C 398 O VAL A 191 ? O VAL C 512 AA1 3 4 O VAL A 190 ? O VAL C 511 N ILE A 113 ? N ILE C 434 AA2 1 2 N TYR A 132 ? N TYR C 453 O ARG A 172 ? O ARG C 493 AA3 1 2 N TYR A 152 ? N TYR C 473 O TYR A 168 ? O TYR C 489 AA4 1 2 N PHE A 220 ? N PHE C 541 O GLY A 227 ? O GLY C 548 AA5 1 2 N VAL B 5 ? N VAL H 5 O ALA B 23 ? O ALA H 23 AA5 2 3 N CYS B 22 ? N CYS H 22 O LEU B 78 ? O LEU H 78 AA5 3 4 O GLN B 81 ? O GLN H 81 N THR B 68 ? N THR H 68 AA6 1 2 N ILE B 12 ? N ILE H 12 O THR B 113 ? O THR H 113 AA7 1 2 O PHE B 58 ? O PHE H 58 N VAL B 50 ? N VAL H 50 AA7 2 3 O LEU B 51 ? O LEU H 51 N MET B 34 ? N MET H 34 AA7 3 4 N GLN B 39 ? N GLN H 39 O ILE B 92 ? O ILE H 92 AA8 1 2 O PHE B 58 ? O PHE H 58 N VAL B 50 ? N VAL H 50 AA8 2 3 O LEU B 51 ? O LEU H 51 N MET B 34 ? N MET H 34 AA8 3 4 N HIS B 35 ? N HIS H 35 O ALA B 96 ? O ALA H 96 AA9 1 2 N PHE B 125 ? N PHE H 125 O LEU B 144 ? O LEU H 144 AA9 2 3 N LEU B 141 ? N LEU H 141 O VAL B 185 ? O VAL H 185 AA9 3 4 O VAL B 184 ? O VAL H 184 N HIS B 167 ? N HIS H 167 AB1 1 2 N PHE B 125 ? N PHE H 125 O LEU B 144 ? O LEU H 144 AB1 2 3 N LEU B 141 ? N LEU H 141 O VAL B 185 ? O VAL H 185 AB1 3 4 O SER B 180 ? O SER H 180 N VAL B 172 ? N VAL H 172 AB2 1 2 N SER B 156 ? N SER H 156 O ASN B 200 ? O ASN H 200 AB2 2 3 N CYS B 199 ? N CYS H 199 O LYS B 212 ? O LYS H 212 AB3 1 2 N THR C 5 ? N THR L 5 O ARG C 24 ? O ARG L 24 AB3 2 3 N CYS C 23 ? N CYS L 23 O PHE C 71 ? O PHE L 71 AB4 1 2 N VAL C 11 ? N VAL L 11 O GLU C 106 ? O GLU L 106 AB5 1 2 O THR C 53 ? O THR L 53 N TYR C 49 ? N TYR L 49 AB5 2 3 O GLN C 45 ? O GLN L 45 N GLN C 37 ? N GLN L 37 AB5 3 4 N ALA C 34 ? N ALA L 34 O GLN C 89 ? O GLN L 89 AB5 4 5 N GLN C 90 ? N GLN L 90 O THR C 98 ? O THR L 98 AB6 1 2 N PHE C 119 ? N PHE L 119 O VAL C 134 ? O VAL L 134 AB6 2 3 N LEU C 137 ? N LEU L 137 O LEU C 176 ? O LEU L 176 AB6 3 4 O SER C 177 ? O SER L 177 N SER C 163 ? N SER L 163 AB7 1 2 N VAL C 151 ? N VAL L 151 O ALA C 154 ? O ALA L 154 AB8 1 2 N TYR C 193 ? N TYR L 193 O PHE C 210 ? O PHE L 210 AB9 1 2 N ALA D 14 ? N ALA B 27 O TRP D 51 ? O TRP B 64 AB9 2 3 N VAL D 54 ? N VAL B 67 O ALA D 247 ? O ALA B 263 AB9 3 4 O TYR D 250 ? O TYR B 266 N ALA D 78 ? N ALA B 93 AB9 4 5 N PHE D 77 ? N PHE B 92 O PHE D 174 ? O PHE B 192 AB9 5 6 N LEU D 171 ? N LEU B 189 O THR D 190 ? O THR B 208 AB9 6 7 N ILE D 185 ? N ILE B 203 O VAL D 211 ? O VAL B 227 AC1 1 2 N HIS D 36 ? N HIS B 49 O LEU D 261 ? O LEU B 277 AC2 1 2 N LEU D 126 ? N LEU B 141 O LEU D 226 ? O LEU B 242 AC2 2 3 O GLN D 223 ? O GLN B 239 N ILE D 90 ? N ILE B 105 AC2 3 4 N PHE D 91 ? N PHE B 106 O LEU D 102 ? O LEU B 117 AC2 4 5 N VAL D 105 ? N VAL B 120 O VAL D 112 ? O VAL B 127 AC2 5 6 N ILE D 113 ? N ILE B 128 O TYR D 152 ? O TYR B 170 # _atom_sites.entry_id 8HC6 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 322 322 PRO PRO C . n A 1 2 THR 2 323 323 THR THR C . n A 1 3 GLU 3 324 324 GLU GLU C . n A 1 4 SER 4 325 325 SER SER C . n A 1 5 ILE 5 326 326 ILE ILE C . n A 1 6 VAL 6 327 327 VAL VAL C . n A 1 7 ARG 7 328 328 ARG ARG C . n A 1 8 PHE 8 329 329 PHE PHE C . n A 1 9 PRO 9 330 330 PRO PRO C . n A 1 10 ASN 10 331 331 ASN ASN C . n A 1 11 ILE 11 332 332 ILE ILE C . n A 1 12 THR 12 333 333 THR THR C . n A 1 13 ASN 13 334 334 ASN ASN C . n A 1 14 LEU 14 335 335 LEU LEU C . n A 1 15 CYS 15 336 336 CYS CYS C . n A 1 16 PRO 16 337 337 PRO PRO C . n A 1 17 PHE 17 338 338 PHE PHE C . n A 1 18 ASP 18 339 339 ASP ASP C . n A 1 19 GLU 19 340 340 GLU GLU C . n A 1 20 VAL 20 341 341 VAL VAL C . n A 1 21 PHE 21 342 342 PHE PHE C . n A 1 22 ASN 22 343 343 ASN ASN C . n A 1 23 ALA 23 344 344 ALA ALA C . n A 1 24 THR 24 345 345 THR THR C . n A 1 25 ARG 25 346 346 ARG ARG C . n A 1 26 PHE 26 347 347 PHE PHE C . n A 1 27 ALA 27 348 348 ALA ALA C . n A 1 28 SER 28 349 349 SER SER C . n A 1 29 VAL 29 350 350 VAL VAL C . n A 1 30 TYR 30 351 351 TYR TYR C . n A 1 31 ALA 31 352 352 ALA ALA C . n A 1 32 TRP 32 353 353 TRP TRP C . n A 1 33 ASN 33 354 354 ASN ASN C . n A 1 34 ARG 34 355 355 ARG ARG C . n A 1 35 LYS 35 356 356 LYS LYS C . n A 1 36 ARG 36 357 357 ARG ARG C . n A 1 37 ILE 37 358 358 ILE ILE C . n A 1 38 SER 38 359 359 SER SER C . n A 1 39 ASN 39 360 360 ASN ASN C . n A 1 40 CYS 40 361 361 CYS CYS C . n A 1 41 VAL 41 362 362 VAL VAL C . n A 1 42 ALA 42 363 363 ALA ALA C . n A 1 43 ASP 43 364 364 ASP ASP C . n A 1 44 TYR 44 365 365 TYR TYR C . n A 1 45 SER 45 366 366 SER SER C . n A 1 46 VAL 46 367 367 VAL VAL C . n A 1 47 LEU 47 368 368 LEU LEU C . n A 1 48 TYR 48 369 369 TYR TYR C . n A 1 49 ASN 49 370 370 ASN ASN C . n A 1 50 LEU 50 371 371 LEU LEU C . n A 1 51 ALA 51 372 372 ALA ALA C . n A 1 52 PRO 52 373 373 PRO PRO C . n A 1 53 PHE 53 374 374 PHE PHE C . n A 1 54 PHE 54 375 375 PHE PHE C . n A 1 55 THR 55 376 376 THR THR C . n A 1 56 PHE 56 377 377 PHE PHE C . n A 1 57 LYS 57 378 378 LYS LYS C . n A 1 58 CYS 58 379 379 CYS CYS C . n A 1 59 TYR 59 380 380 TYR TYR C . n A 1 60 GLY 60 381 381 GLY GLY C . n A 1 61 VAL 61 382 382 VAL VAL C . n A 1 62 SER 62 383 383 SER SER C . n A 1 63 PRO 63 384 384 PRO PRO C . n A 1 64 THR 64 385 385 THR THR C . n A 1 65 LYS 65 386 386 LYS LYS C . n A 1 66 LEU 66 387 387 LEU LEU C . n A 1 67 ASN 67 388 388 ASN ASN C . n A 1 68 ASP 68 389 389 ASP ASP C . n A 1 69 LEU 69 390 390 LEU LEU C . n A 1 70 CYS 70 391 391 CYS CYS C . n A 1 71 PHE 71 392 392 PHE PHE C . n A 1 72 THR 72 393 393 THR THR C . n A 1 73 ASN 73 394 394 ASN ASN C . n A 1 74 VAL 74 395 395 VAL VAL C . n A 1 75 TYR 75 396 396 TYR TYR C . n A 1 76 ALA 76 397 397 ALA ALA C . n A 1 77 ASP 77 398 398 ASP ASP C . n A 1 78 SER 78 399 399 SER SER C . n A 1 79 PHE 79 400 400 PHE PHE C . n A 1 80 VAL 80 401 401 VAL VAL C . n A 1 81 ILE 81 402 402 ILE ILE C . n A 1 82 ARG 82 403 403 ARG ARG C . n A 1 83 GLY 83 404 404 GLY GLY C . n A 1 84 ASP 84 405 405 ASP ASP C . n A 1 85 GLU 85 406 406 GLU GLU C . n A 1 86 VAL 86 407 407 VAL VAL C . n A 1 87 ARG 87 408 408 ARG ARG C . n A 1 88 GLN 88 409 409 GLN GLN C . n A 1 89 ILE 89 410 410 ILE ILE C . n A 1 90 ALA 90 411 411 ALA ALA C . n A 1 91 PRO 91 412 412 PRO PRO C . n A 1 92 GLY 92 413 413 GLY GLY C . n A 1 93 GLN 93 414 414 GLN GLN C . n A 1 94 THR 94 415 415 THR THR C . n A 1 95 GLY 95 416 416 GLY GLY C . n A 1 96 ASN 96 417 417 ASN ASN C . n A 1 97 ILE 97 418 418 ILE ILE C . n A 1 98 ALA 98 419 419 ALA ALA C . n A 1 99 ASP 99 420 420 ASP ASP C . n A 1 100 TYR 100 421 421 TYR TYR C . n A 1 101 ASN 101 422 422 ASN ASN C . n A 1 102 TYR 102 423 423 TYR TYR C . n A 1 103 LYS 103 424 424 LYS LYS C . n A 1 104 LEU 104 425 425 LEU LEU C . n A 1 105 PRO 105 426 426 PRO PRO C . n A 1 106 ASP 106 427 427 ASP ASP C . n A 1 107 ASP 107 428 428 ASP ASP C . n A 1 108 PHE 108 429 429 PHE PHE C . n A 1 109 THR 109 430 430 THR THR C . n A 1 110 GLY 110 431 431 GLY GLY C . n A 1 111 CYS 111 432 432 CYS CYS C . n A 1 112 VAL 112 433 433 VAL VAL C . n A 1 113 ILE 113 434 434 ILE ILE C . n A 1 114 ALA 114 435 435 ALA ALA C . n A 1 115 TRP 115 436 436 TRP TRP C . n A 1 116 ASN 116 437 437 ASN ASN C . n A 1 117 SER 117 438 438 SER SER C . n A 1 118 ASN 118 439 439 ASN ASN C . n A 1 119 LYS 119 440 440 LYS LYS C . n A 1 120 LEU 120 441 441 LEU LEU C . n A 1 121 ASP 121 442 442 ASP ASP C . n A 1 122 SER 122 443 443 SER SER C . n A 1 123 LYS 123 444 444 LYS LYS C . n A 1 124 VAL 124 445 445 VAL VAL C . n A 1 125 SER 125 446 446 SER SER C . n A 1 126 GLY 126 447 447 GLY GLY C . n A 1 127 ASN 127 448 448 ASN ASN C . n A 1 128 TYR 128 449 449 TYR TYR C . n A 1 129 ASN 129 450 450 ASN ASN C . n A 1 130 TYR 130 451 451 TYR TYR C . n A 1 131 LEU 131 452 452 LEU LEU C . n A 1 132 TYR 132 453 453 TYR TYR C . n A 1 133 ARG 133 454 454 ARG ARG C . n A 1 134 LEU 134 455 455 LEU LEU C . n A 1 135 PHE 135 456 456 PHE PHE C . n A 1 136 ARG 136 457 457 ARG ARG C . n A 1 137 LYS 137 458 458 LYS LYS C . n A 1 138 SER 138 459 459 SER SER C . n A 1 139 ASN 139 460 460 ASN ASN C . n A 1 140 LEU 140 461 461 LEU LEU C . n A 1 141 LYS 141 462 462 LYS LYS C . n A 1 142 PRO 142 463 463 PRO PRO C . n A 1 143 PHE 143 464 464 PHE PHE C . n A 1 144 GLU 144 465 465 GLU GLU C . n A 1 145 ARG 145 466 466 ARG ARG C . n A 1 146 ASP 146 467 467 ASP ASP C . n A 1 147 ILE 147 468 468 ILE ILE C . n A 1 148 SER 148 469 469 SER SER C . n A 1 149 THR 149 470 470 THR THR C . n A 1 150 GLU 150 471 471 GLU GLU C . n A 1 151 ILE 151 472 472 ILE ILE C . n A 1 152 TYR 152 473 473 TYR TYR C . n A 1 153 GLN 153 474 474 GLN GLN C . n A 1 154 ALA 154 475 475 ALA ALA C . n A 1 155 GLY 155 476 476 GLY GLY C . n A 1 156 ASN 156 477 477 ASN ASN C . n A 1 157 LYS 157 478 478 LYS LYS C . n A 1 158 PRO 158 479 479 PRO PRO C . n A 1 159 CYS 159 480 480 CYS CYS C . n A 1 160 ASN 160 481 481 ASN ASN C . n A 1 161 GLY 161 482 482 GLY GLY C . n A 1 162 VAL 162 483 483 VAL VAL C . n A 1 163 ALA 163 484 484 ALA ALA C . n A 1 164 GLY 164 485 485 GLY GLY C . n A 1 165 PHE 165 486 486 PHE PHE C . n A 1 166 ASN 166 487 487 ASN ASN C . n A 1 167 CYS 167 488 488 CYS CYS C . n A 1 168 TYR 168 489 489 TYR TYR C . n A 1 169 PHE 169 490 490 PHE PHE C . n A 1 170 PRO 170 491 491 PRO PRO C . n A 1 171 LEU 171 492 492 LEU LEU C . n A 1 172 ARG 172 493 493 ARG ARG C . n A 1 173 SER 173 494 494 SER SER C . n A 1 174 TYR 174 495 495 TYR TYR C . n A 1 175 SER 175 496 496 SER SER C . n A 1 176 PHE 176 497 497 PHE PHE C . n A 1 177 ARG 177 498 498 ARG ARG C . n A 1 178 PRO 178 499 499 PRO PRO C . n A 1 179 THR 179 500 500 THR THR C . n A 1 180 TYR 180 501 501 TYR TYR C . n A 1 181 GLY 181 502 502 GLY GLY C . n A 1 182 VAL 182 503 503 VAL VAL C . n A 1 183 GLY 183 504 504 GLY GLY C . n A 1 184 HIS 184 505 505 HIS HIS C . n A 1 185 GLN 185 506 506 GLN GLN C . n A 1 186 PRO 186 507 507 PRO PRO C . n A 1 187 TYR 187 508 508 TYR TYR C . n A 1 188 ARG 188 509 509 ARG ARG C . n A 1 189 VAL 189 510 510 VAL VAL C . n A 1 190 VAL 190 511 511 VAL VAL C . n A 1 191 VAL 191 512 512 VAL VAL C . n A 1 192 LEU 192 513 513 LEU LEU C . n A 1 193 SER 193 514 514 SER SER C . n A 1 194 PHE 194 515 515 PHE PHE C . n A 1 195 GLU 195 516 516 GLU GLU C . n A 1 196 LEU 196 517 517 LEU LEU C . n A 1 197 LEU 197 518 518 LEU LEU C . n A 1 198 HIS 198 519 519 HIS HIS C . n A 1 199 ALA 199 520 520 ALA ALA C . n A 1 200 PRO 200 521 521 PRO PRO C . n A 1 201 ALA 201 522 522 ALA ALA C . n A 1 202 THR 202 523 523 THR THR C . n A 1 203 VAL 203 524 524 VAL VAL C . n A 1 204 CYS 204 525 525 CYS CYS C . n A 1 205 GLY 205 526 526 GLY GLY C . n A 1 206 PRO 206 527 527 PRO PRO C . n A 1 207 LYS 207 528 528 LYS LYS C . n A 1 208 LYS 208 529 529 LYS LYS C . n A 1 209 SER 209 530 530 SER SER C . n A 1 210 THR 210 531 531 THR THR C . n A 1 211 ASN 211 532 532 ASN ASN C . n A 1 212 LEU 212 533 533 LEU LEU C . n A 1 213 VAL 213 534 534 VAL VAL C . n A 1 214 LYS 214 535 535 LYS LYS C . n A 1 215 ASN 215 536 536 ASN ASN C . n A 1 216 LYS 216 537 537 LYS LYS C . n A 1 217 CYS 217 538 538 CYS CYS C . n A 1 218 VAL 218 539 539 VAL VAL C . n A 1 219 ASN 219 540 540 ASN ASN C . n A 1 220 PHE 220 541 541 PHE PHE C . n A 1 221 ASN 221 542 542 ASN ASN C . n A 1 222 PHE 222 543 543 PHE PHE C . n A 1 223 ASN 223 544 544 ASN ASN C . n A 1 224 GLY 224 545 545 GLY GLY C . n A 1 225 LEU 225 546 546 LEU LEU C . n A 1 226 LYS 226 547 547 LYS LYS C . n A 1 227 GLY 227 548 548 GLY GLY C . n A 1 228 THR 228 549 549 THR THR C . n A 1 229 GLY 229 550 550 GLY GLY C . n A 1 230 VAL 230 551 551 VAL VAL C . n A 1 231 LEU 231 552 552 LEU LEU C . n A 1 232 THR 232 553 553 THR THR C . n A 1 233 GLU 233 554 554 GLU GLU C . n A 1 234 SER 234 555 555 SER SER C . n A 1 235 ASN 235 556 556 ASN ASN C . n A 1 236 LYS 236 557 557 LYS LYS C . n A 1 237 LYS 237 558 558 LYS LYS C . n A 1 238 PHE 238 559 559 PHE PHE C . n A 1 239 LEU 239 560 560 LEU LEU C . n A 1 240 PRO 240 561 561 PRO PRO C . n A 1 241 PHE 241 562 562 PHE PHE C . n A 1 242 GLN 242 563 563 GLN GLN C . n A 1 243 GLN 243 564 564 GLN GLN C . n A 1 244 PHE 244 565 565 PHE PHE C . n A 1 245 GLY 245 566 566 GLY GLY C . n A 1 246 ARG 246 567 567 ARG ARG C . n A 1 247 ASP 247 568 568 ASP ASP C . n A 1 248 ILE 248 569 569 ILE ILE C . n A 1 249 ALA 249 570 570 ALA ALA C . n A 1 250 ASP 250 571 571 ASP ASP C . n A 1 251 THR 251 572 572 THR THR C . n A 1 252 THR 252 573 573 THR THR C . n A 1 253 ASP 253 574 574 ASP ASP C . n A 1 254 ALA 254 575 575 ALA ALA C . n A 1 255 VAL 255 576 576 VAL VAL C . n A 1 256 ARG 256 577 577 ARG ARG C . n A 1 257 ASP 257 578 578 ASP ASP C . n A 1 258 PRO 258 579 579 PRO PRO C . n A 1 259 GLN 259 580 580 GLN GLN C . n A 1 260 THR 260 581 581 THR THR C . n A 1 261 LEU 261 582 582 LEU LEU C . n A 1 262 GLU 262 583 583 GLU GLU C . n A 1 263 ILE 263 584 584 ILE ILE C . n A 1 264 LEU 264 585 585 LEU LEU C . n A 1 265 ASP 265 586 586 ASP ASP C . n A 1 266 ILE 266 587 587 ILE ILE C . n A 1 267 THR 267 588 588 THR THR C . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLU 6 6 6 GLU GLU H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 ILE 12 12 12 ILE ILE H . n B 2 13 GLN 13 13 13 GLN GLN H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 GLY 16 16 16 GLY GLY H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 ARG 19 19 19 ARG ARG H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 ALA 23 23 23 ALA ALA H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 LEU 27 27 27 LEU LEU H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 VAL 29 29 29 VAL VAL H . n B 2 30 SER 30 30 30 SER SER H . n B 2 31 SER 31 31 31 SER SER H . n B 2 32 ASN 32 32 32 ASN ASN H . n B 2 33 TYR 33 33 33 TYR TYR H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 LYS 43 43 43 LYS LYS H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 VAL 48 48 48 VAL VAL H . n B 2 49 SER 49 49 49 SER SER H . n B 2 50 VAL 50 50 50 VAL VAL H . n B 2 51 LEU 51 51 51 LEU LEU H . n B 2 52 TYR 52 52 52 TYR TYR H . n B 2 53 ALA 53 53 53 ALA ALA H . n B 2 54 GLY 54 54 54 GLY GLY H . n B 2 55 GLY 55 55 55 GLY GLY H . n B 2 56 SER 56 56 56 SER SER H . n B 2 57 ALA 57 57 57 ALA ALA H . n B 2 58 PHE 58 58 58 PHE PHE H . n B 2 59 TYR 59 59 59 TYR TYR H . n B 2 60 ALA 60 60 60 ALA ALA H . n B 2 61 ASP 61 61 61 ASP ASP H . n B 2 62 SER 62 62 62 SER SER H . n B 2 63 VAL 63 63 63 VAL VAL H . n B 2 64 LYS 64 64 64 LYS LYS H . n B 2 65 GLY 65 65 65 GLY GLY H . n B 2 66 ARG 66 66 66 ARG ARG H . n B 2 67 PHE 67 67 67 PHE PHE H . n B 2 68 THR 68 68 68 THR THR H . n B 2 69 ILE 69 69 69 ILE ILE H . n B 2 70 SER 70 70 70 SER SER H . n B 2 71 ARG 71 71 71 ARG ARG H . n B 2 72 ASN 72 72 72 ASN ASN H . n B 2 73 ASN 73 73 73 ASN ASN H . n B 2 74 SER 74 74 74 SER SER H . n B 2 75 LYS 75 75 75 LYS LYS H . n B 2 76 ASN 76 76 76 ASN ASN H . n B 2 77 THR 77 77 77 THR THR H . n B 2 78 LEU 78 78 78 LEU LEU H . n B 2 79 TYR 79 79 79 TYR TYR H . n B 2 80 LEU 80 80 80 LEU LEU H . n B 2 81 GLN 81 81 81 GLN GLN H . n B 2 82 MET 82 82 82 MET MET H . n B 2 83 ASN 83 83 83 ASN ASN H . n B 2 84 SER 84 84 84 SER SER H . n B 2 85 LEU 85 85 85 LEU LEU H . n B 2 86 ARG 86 86 86 ARG ARG H . n B 2 87 ALA 87 87 87 ALA ALA H . n B 2 88 GLU 88 88 88 GLU GLU H . n B 2 89 ASP 89 89 89 ASP ASP H . n B 2 90 THR 90 90 90 THR THR H . n B 2 91 ALA 91 91 91 ALA ALA H . n B 2 92 ILE 92 92 92 ILE ILE H . n B 2 93 TYR 93 93 93 TYR TYR H . n B 2 94 TYR 94 94 94 TYR TYR H . n B 2 95 CYS 95 95 95 CYS CYS H . n B 2 96 ALA 96 96 96 ALA ALA H . n B 2 97 ARG 97 97 97 ARG ARG H . n B 2 98 GLY 98 98 98 GLY GLY H . n B 2 99 LEU 99 99 99 LEU LEU H . n B 2 100 GLY 100 100 100 GLY GLY H . n B 2 101 ASP 101 101 101 ASP ASP H . n B 2 102 TYR 102 102 102 TYR TYR H . n B 2 103 LEU 103 103 103 LEU LEU H . n B 2 104 ASP 104 104 104 ASP ASP H . n B 2 105 SER 105 105 105 SER SER H . n B 2 106 TRP 106 106 106 TRP TRP H . n B 2 107 GLY 107 107 107 GLY GLY H . n B 2 108 GLN 108 108 108 GLN GLN H . n B 2 109 GLY 109 109 109 GLY GLY H . n B 2 110 THR 110 110 110 THR THR H . n B 2 111 LEU 111 111 111 LEU LEU H . n B 2 112 VAL 112 112 112 VAL VAL H . n B 2 113 THR 113 113 113 THR THR H . n B 2 114 VAL 114 114 114 VAL VAL H . n B 2 115 SER 115 115 115 SER SER H . n B 2 116 SER 116 116 116 SER SER H . n B 2 117 ALA 117 117 117 ALA ALA H . n B 2 118 SER 118 118 118 SER SER H . n B 2 119 THR 119 119 119 THR THR H . n B 2 120 LYS 120 120 120 LYS LYS H . n B 2 121 GLY 121 121 121 GLY GLY H . n B 2 122 PRO 122 122 122 PRO PRO H . n B 2 123 SER 123 123 123 SER SER H . n B 2 124 VAL 124 124 124 VAL VAL H . n B 2 125 PHE 125 125 125 PHE PHE H . n B 2 126 PRO 126 126 126 PRO PRO H . n B 2 127 LEU 127 127 127 LEU LEU H . n B 2 128 ALA 128 128 128 ALA ALA H . n B 2 129 PRO 129 129 129 PRO PRO H . n B 2 130 SER 130 130 130 SER SER H . n B 2 131 SER 131 131 131 SER SER H . n B 2 132 LYS 132 132 ? ? ? H . n B 2 133 SER 133 133 ? ? ? H . n B 2 134 THR 134 134 ? ? ? H . n B 2 135 SER 135 135 ? ? ? H . n B 2 136 GLY 136 136 ? ? ? H . n B 2 137 GLY 137 137 ? ? ? H . n B 2 138 THR 138 138 138 THR THR H . n B 2 139 ALA 139 139 139 ALA ALA H . n B 2 140 ALA 140 140 140 ALA ALA H . n B 2 141 LEU 141 141 141 LEU LEU H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 CYS 143 143 143 CYS CYS H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 VAL 145 145 145 VAL VAL H . n B 2 146 LYS 146 146 146 LYS LYS H . n B 2 147 ASP 147 147 147 ASP ASP H . n B 2 148 TYR 148 148 148 TYR TYR H . n B 2 149 PHE 149 149 149 PHE PHE H . n B 2 150 PRO 150 150 150 PRO PRO H . n B 2 151 GLU 151 151 151 GLU GLU H . n B 2 152 PRO 152 152 152 PRO PRO H . n B 2 153 VAL 153 153 153 VAL VAL H . n B 2 154 THR 154 154 154 THR THR H . n B 2 155 VAL 155 155 155 VAL VAL H . n B 2 156 SER 156 156 156 SER SER H . n B 2 157 TRP 157 157 157 TRP TRP H . n B 2 158 ASN 158 158 158 ASN ASN H . n B 2 159 SER 159 159 159 SER SER H . n B 2 160 GLY 160 160 160 GLY GLY H . n B 2 161 ALA 161 161 161 ALA ALA H . n B 2 162 LEU 162 162 162 LEU LEU H . n B 2 163 THR 163 163 163 THR THR H . n B 2 164 SER 164 164 164 SER SER H . n B 2 165 GLY 165 165 165 GLY GLY H . n B 2 166 VAL 166 166 166 VAL VAL H . n B 2 167 HIS 167 167 167 HIS HIS H . n B 2 168 THR 168 168 168 THR THR H . n B 2 169 PHE 169 169 169 PHE PHE H . n B 2 170 PRO 170 170 170 PRO PRO H . n B 2 171 ALA 171 171 171 ALA ALA H . n B 2 172 VAL 172 172 172 VAL VAL H . n B 2 173 LEU 173 173 173 LEU LEU H . n B 2 174 GLN 174 174 174 GLN GLN H . n B 2 175 SER 175 175 175 SER SER H . n B 2 176 SER 176 176 176 SER SER H . n B 2 177 GLY 177 177 177 GLY GLY H . n B 2 178 LEU 178 178 178 LEU LEU H . n B 2 179 TYR 179 179 179 TYR TYR H . n B 2 180 SER 180 180 180 SER SER H . n B 2 181 LEU 181 181 181 LEU LEU H . n B 2 182 SER 182 182 182 SER SER H . n B 2 183 SER 183 183 183 SER SER H . n B 2 184 VAL 184 184 184 VAL VAL H . n B 2 185 VAL 185 185 185 VAL VAL H . n B 2 186 THR 186 186 186 THR THR H . n B 2 187 VAL 187 187 187 VAL VAL H . n B 2 188 PRO 188 188 188 PRO PRO H . n B 2 189 SER 189 189 189 SER SER H . n B 2 190 SER 190 190 190 SER SER H . n B 2 191 SER 191 191 191 SER SER H . n B 2 192 LEU 192 192 192 LEU LEU H . n B 2 193 GLY 193 193 193 GLY GLY H . n B 2 194 THR 194 194 194 THR THR H . n B 2 195 GLN 195 195 195 GLN GLN H . n B 2 196 THR 196 196 196 THR THR H . n B 2 197 TYR 197 197 197 TYR TYR H . n B 2 198 ILE 198 198 198 ILE ILE H . n B 2 199 CYS 199 199 199 CYS CYS H . n B 2 200 ASN 200 200 200 ASN ASN H . n B 2 201 VAL 201 201 201 VAL VAL H . n B 2 202 ASN 202 202 202 ASN ASN H . n B 2 203 HIS 203 203 203 HIS HIS H . n B 2 204 LYS 204 204 204 LYS LYS H . n B 2 205 PRO 205 205 205 PRO PRO H . n B 2 206 SER 206 206 206 SER SER H . n B 2 207 ASN 207 207 207 ASN ASN H . n B 2 208 THR 208 208 208 THR THR H . n B 2 209 LYS 209 209 209 LYS LYS H . n B 2 210 VAL 210 210 210 VAL VAL H . n B 2 211 ASP 211 211 211 ASP ASP H . n B 2 212 LYS 212 212 212 LYS LYS H . n B 2 213 LYS 213 213 213 LYS LYS H . n B 2 214 VAL 214 214 214 VAL VAL H . n B 2 215 GLU 215 215 215 GLU GLU H . n B 2 216 PRO 216 216 216 PRO PRO H . n B 2 217 LYS 217 217 217 LYS LYS H . n B 2 218 SER 218 218 218 SER SER H . n B 2 219 CYS 219 219 219 CYS CYS H . n B 2 220 ASP 220 220 220 ASP ASP H . n C 3 1 ASP 1 1 1 ASP ASP L . n C 3 2 ILE 2 2 2 ILE ILE L . n C 3 3 GLN 3 3 3 GLN GLN L . n C 3 4 MET 4 4 4 MET MET L . n C 3 5 THR 5 5 5 THR THR L . n C 3 6 GLN 6 6 6 GLN GLN L . n C 3 7 SER 7 7 7 SER SER L . n C 3 8 PRO 8 8 8 PRO PRO L . n C 3 9 SER 9 9 9 SER SER L . n C 3 10 SER 10 10 10 SER SER L . n C 3 11 VAL 11 11 11 VAL VAL L . n C 3 12 SER 12 12 12 SER SER L . n C 3 13 ALA 13 13 13 ALA ALA L . n C 3 14 SER 14 14 14 SER SER L . n C 3 15 VAL 15 15 15 VAL VAL L . n C 3 16 GLY 16 16 16 GLY GLY L . n C 3 17 ASP 17 17 17 ASP ASP L . n C 3 18 ARG 18 18 18 ARG ARG L . n C 3 19 VAL 19 19 19 VAL VAL L . n C 3 20 THR 20 20 20 THR THR L . n C 3 21 ILE 21 21 21 ILE ILE L . n C 3 22 THR 22 22 22 THR THR L . n C 3 23 CYS 23 23 23 CYS CYS L . n C 3 24 ARG 24 24 24 ARG ARG L . n C 3 25 ALA 25 25 25 ALA ALA L . n C 3 26 SER 26 26 26 SER SER L . n C 3 27 GLN 27 27 27 GLN GLN L . n C 3 28 GLY 28 28 28 GLY GLY L . n C 3 29 ILE 29 29 29 ILE ILE L . n C 3 30 GLY 30 30 30 GLY GLY L . n C 3 31 SER 31 31 31 SER SER L . n C 3 32 TRP 32 32 32 TRP TRP L . n C 3 33 LEU 33 33 33 LEU LEU L . n C 3 34 ALA 34 34 34 ALA ALA L . n C 3 35 TRP 35 35 35 TRP TRP L . n C 3 36 TYR 36 36 36 TYR TYR L . n C 3 37 GLN 37 37 37 GLN GLN L . n C 3 38 GLN 38 38 38 GLN GLN L . n C 3 39 LYS 39 39 39 LYS LYS L . n C 3 40 PRO 40 40 40 PRO PRO L . n C 3 41 GLY 41 41 41 GLY GLY L . n C 3 42 LYS 42 42 42 LYS LYS L . n C 3 43 ALA 43 43 43 ALA ALA L . n C 3 44 PRO 44 44 44 PRO PRO L . n C 3 45 GLN 45 45 45 GLN GLN L . n C 3 46 LEU 46 46 46 LEU LEU L . n C 3 47 LEU 47 47 47 LEU LEU L . n C 3 48 ILE 48 48 48 ILE ILE L . n C 3 49 TYR 49 49 49 TYR TYR L . n C 3 50 ALA 50 50 50 ALA ALA L . n C 3 51 ALA 51 51 51 ALA ALA L . n C 3 52 SER 52 52 52 SER SER L . n C 3 53 THR 53 53 53 THR THR L . n C 3 54 LEU 54 54 54 LEU LEU L . n C 3 55 GLN 55 55 55 GLN GLN L . n C 3 56 SER 56 56 56 SER SER L . n C 3 57 GLY 57 57 57 GLY GLY L . n C 3 58 VAL 58 58 58 VAL VAL L . n C 3 59 PRO 59 59 59 PRO PRO L . n C 3 60 PRO 60 60 60 PRO PRO L . n C 3 61 ARG 61 61 61 ARG ARG L . n C 3 62 PHE 62 62 62 PHE PHE L . n C 3 63 SER 63 63 63 SER SER L . n C 3 64 GLY 64 64 64 GLY GLY L . n C 3 65 SER 65 65 65 SER SER L . n C 3 66 GLY 66 66 66 GLY GLY L . n C 3 67 SER 67 67 67 SER SER L . n C 3 68 GLY 68 68 68 GLY GLY L . n C 3 69 THR 69 69 69 THR THR L . n C 3 70 ASP 70 70 70 ASP ASP L . n C 3 71 PHE 71 71 71 PHE PHE L . n C 3 72 THR 72 72 72 THR THR L . n C 3 73 LEU 73 73 73 LEU LEU L . n C 3 74 THR 74 74 74 THR THR L . n C 3 75 ILE 75 75 75 ILE ILE L . n C 3 76 THR 76 76 76 THR THR L . n C 3 77 SER 77 77 77 SER SER L . n C 3 78 LEU 78 78 78 LEU LEU L . n C 3 79 GLN 79 79 79 GLN GLN L . n C 3 80 PRO 80 80 80 PRO PRO L . n C 3 81 GLU 81 81 81 GLU GLU L . n C 3 82 ASP 82 82 82 ASP ASP L . n C 3 83 PHE 83 83 83 PHE PHE L . n C 3 84 ALA 84 84 84 ALA ALA L . n C 3 85 SER 85 85 85 SER SER L . n C 3 86 TYR 86 86 86 TYR TYR L . n C 3 87 TYR 87 87 87 TYR TYR L . n C 3 88 CYS 88 88 88 CYS CYS L . n C 3 89 GLN 89 89 89 GLN GLN L . n C 3 90 GLN 90 90 90 GLN GLN L . n C 3 91 ALA 91 91 91 ALA ALA L . n C 3 92 ASN 92 92 92 ASN ASN L . n C 3 93 SER 93 93 93 SER SER L . n C 3 94 VAL 94 94 94 VAL VAL L . n C 3 95 LEU 95 95 95 LEU LEU L . n C 3 96 ALA 96 96 96 ALA ALA L . n C 3 97 LEU 97 97 97 LEU LEU L . n C 3 98 THR 98 98 98 THR THR L . n C 3 99 PHE 99 99 99 PHE PHE L . n C 3 100 GLY 100 100 100 GLY GLY L . n C 3 101 GLY 101 101 101 GLY GLY L . n C 3 102 GLY 102 102 102 GLY GLY L . n C 3 103 THR 103 103 103 THR THR L . n C 3 104 LYS 104 104 104 LYS LYS L . n C 3 105 VAL 105 105 105 VAL VAL L . n C 3 106 GLU 106 106 106 GLU GLU L . n C 3 107 ILE 107 107 107 ILE ILE L . n C 3 108 LYS 108 108 108 LYS LYS L . n C 3 109 ARG 109 109 109 ARG ARG L . n C 3 110 THR 110 110 110 THR THR L . n C 3 111 VAL 111 111 111 VAL VAL L . n C 3 112 ALA 112 112 112 ALA ALA L . n C 3 113 ALA 113 113 113 ALA ALA L . n C 3 114 PRO 114 114 114 PRO PRO L . n C 3 115 SER 115 115 115 SER SER L . n C 3 116 VAL 116 116 116 VAL VAL L . n C 3 117 PHE 117 117 117 PHE PHE L . n C 3 118 ILE 118 118 118 ILE ILE L . n C 3 119 PHE 119 119 119 PHE PHE L . n C 3 120 PRO 120 120 120 PRO PRO L . n C 3 121 PRO 121 121 121 PRO PRO L . n C 3 122 SER 122 122 122 SER SER L . n C 3 123 ASP 123 123 123 ASP ASP L . n C 3 124 GLU 124 124 124 GLU GLU L . n C 3 125 GLN 125 125 125 GLN GLN L . n C 3 126 LEU 126 126 126 LEU LEU L . n C 3 127 LYS 127 127 127 LYS LYS L . n C 3 128 SER 128 128 128 SER SER L . n C 3 129 GLY 129 129 129 GLY GLY L . n C 3 130 THR 130 130 130 THR THR L . n C 3 131 ALA 131 131 131 ALA ALA L . n C 3 132 SER 132 132 132 SER SER L . n C 3 133 VAL 133 133 133 VAL VAL L . n C 3 134 VAL 134 134 134 VAL VAL L . n C 3 135 CYS 135 135 135 CYS CYS L . n C 3 136 LEU 136 136 136 LEU LEU L . n C 3 137 LEU 137 137 137 LEU LEU L . n C 3 138 ASN 138 138 138 ASN ASN L . n C 3 139 ASN 139 139 139 ASN ASN L . n C 3 140 PHE 140 140 140 PHE PHE L . n C 3 141 TYR 141 141 141 TYR TYR L . n C 3 142 PRO 142 142 142 PRO PRO L . n C 3 143 ARG 143 143 143 ARG ARG L . n C 3 144 GLU 144 144 144 GLU GLU L . n C 3 145 ALA 145 145 145 ALA ALA L . n C 3 146 LYS 146 146 146 LYS LYS L . n C 3 147 VAL 147 147 147 VAL VAL L . n C 3 148 GLN 148 148 148 GLN GLN L . n C 3 149 TRP 149 149 149 TRP TRP L . n C 3 150 LYS 150 150 150 LYS LYS L . n C 3 151 VAL 151 151 151 VAL VAL L . n C 3 152 ASP 152 152 152 ASP ASP L . n C 3 153 ASN 153 153 153 ASN ASN L . n C 3 154 ALA 154 154 154 ALA ALA L . n C 3 155 LEU 155 155 155 LEU LEU L . n C 3 156 GLN 156 156 156 GLN GLN L . n C 3 157 SER 157 157 157 SER SER L . n C 3 158 GLY 158 158 158 GLY GLY L . n C 3 159 ASN 159 159 159 ASN ASN L . n C 3 160 SER 160 160 160 SER SER L . n C 3 161 GLN 161 161 161 GLN GLN L . n C 3 162 GLU 162 162 162 GLU GLU L . n C 3 163 SER 163 163 163 SER SER L . n C 3 164 VAL 164 164 164 VAL VAL L . n C 3 165 THR 165 165 165 THR THR L . n C 3 166 GLU 166 166 166 GLU GLU L . n C 3 167 GLN 167 167 167 GLN GLN L . n C 3 168 ASP 168 168 168 ASP ASP L . n C 3 169 SER 169 169 169 SER SER L . n C 3 170 LYS 170 170 170 LYS LYS L . n C 3 171 ASP 171 171 171 ASP ASP L . n C 3 172 SER 172 172 172 SER SER L . n C 3 173 THR 173 173 173 THR THR L . n C 3 174 TYR 174 174 174 TYR TYR L . n C 3 175 SER 175 175 175 SER SER L . n C 3 176 LEU 176 176 176 LEU LEU L . n C 3 177 SER 177 177 177 SER SER L . n C 3 178 SER 178 178 178 SER SER L . n C 3 179 THR 179 179 179 THR THR L . n C 3 180 LEU 180 180 180 LEU LEU L . n C 3 181 THR 181 181 181 THR THR L . n C 3 182 LEU 182 182 182 LEU LEU L . n C 3 183 SER 183 183 183 SER SER L . n C 3 184 LYS 184 184 184 LYS LYS L . n C 3 185 ALA 185 185 185 ALA ALA L . n C 3 186 ASP 186 186 186 ASP ASP L . n C 3 187 TYR 187 187 187 TYR TYR L . n C 3 188 GLU 188 188 188 GLU GLU L . n C 3 189 LYS 189 189 189 LYS LYS L . n C 3 190 HIS 190 190 190 HIS HIS L . n C 3 191 LYS 191 191 191 LYS LYS L . n C 3 192 VAL 192 192 192 VAL VAL L . n C 3 193 TYR 193 193 193 TYR TYR L . n C 3 194 ALA 194 194 194 ALA ALA L . n C 3 195 CYS 195 195 195 CYS CYS L . n C 3 196 GLU 196 196 196 GLU GLU L . n C 3 197 VAL 197 197 197 VAL VAL L . n C 3 198 THR 198 198 198 THR THR L . n C 3 199 HIS 199 199 199 HIS HIS L . n C 3 200 GLN 200 200 200 GLN GLN L . n C 3 201 GLY 201 201 201 GLY GLY L . n C 3 202 LEU 202 202 202 LEU LEU L . n C 3 203 SER 203 203 203 SER SER L . n C 3 204 SER 204 204 204 SER SER L . n C 3 205 PRO 205 205 205 PRO PRO L . n C 3 206 VAL 206 206 206 VAL VAL L . n C 3 207 THR 207 207 207 THR THR L . n C 3 208 LYS 208 208 208 LYS LYS L . n C 3 209 SER 209 209 209 SER SER L . n C 3 210 PHE 210 210 210 PHE PHE L . n C 3 211 ASN 211 211 211 ASN ASN L . n C 3 212 ARG 212 212 212 ARG ARG L . n C 3 213 GLY 213 213 213 GLY GLY L . n C 3 214 GLU 214 214 214 GLU GLU L . n C 3 215 CYS 215 215 215 CYS CYS L . n D 4 1 GLN 1 14 14 GLN GLN B . n D 4 2 CYS 2 15 15 CYS CYS B . n D 4 3 VAL 3 16 16 VAL VAL B . n D 4 4 ASN 4 17 17 ASN ASN B . n D 4 5 LEU 5 18 18 LEU LEU B . n D 4 6 THR 6 19 19 THR THR B . n D 4 7 THR 7 20 20 THR THR B . n D 4 8 ARG 8 21 21 ARG ARG B . n D 4 9 THR 9 22 22 THR THR B . n D 4 10 GLN 10 23 23 GLN GLN B . n D 4 11 LEU 11 24 24 LEU LEU B . n D 4 12 PRO 12 25 25 PRO PRO B . n D 4 13 PRO 13 26 26 PRO PRO B . n D 4 14 ALA 14 27 27 ALA ALA B . n D 4 15 TYR 15 28 28 TYR TYR B . n D 4 16 THR 16 29 29 THR THR B . n D 4 17 ASN 17 30 30 ASN ASN B . n D 4 18 SER 18 31 31 SER SER B . n D 4 19 PHE 19 32 32 PHE PHE B . n D 4 20 THR 20 33 33 THR THR B . n D 4 21 ARG 21 34 34 ARG ARG B . n D 4 22 GLY 22 35 35 GLY GLY B . n D 4 23 VAL 23 36 36 VAL VAL B . n D 4 24 TYR 24 37 37 TYR TYR B . n D 4 25 TYR 25 38 38 TYR TYR B . n D 4 26 PRO 26 39 39 PRO PRO B . n D 4 27 ASP 27 40 40 ASP ASP B . n D 4 28 LYS 28 41 41 LYS LYS B . n D 4 29 VAL 29 42 42 VAL VAL B . n D 4 30 PHE 30 43 43 PHE PHE B . n D 4 31 ARG 31 44 44 ARG ARG B . n D 4 32 SER 32 45 45 SER SER B . n D 4 33 SER 33 46 46 SER SER B . n D 4 34 VAL 34 47 47 VAL VAL B . n D 4 35 LEU 35 48 48 LEU LEU B . n D 4 36 HIS 36 49 49 HIS HIS B . n D 4 37 SER 37 50 50 SER SER B . n D 4 38 THR 38 51 51 THR THR B . n D 4 39 GLN 39 52 52 GLN GLN B . n D 4 40 ASP 40 53 53 ASP ASP B . n D 4 41 LEU 41 54 54 LEU LEU B . n D 4 42 PHE 42 55 55 PHE PHE B . n D 4 43 LEU 43 56 56 LEU LEU B . n D 4 44 PRO 44 57 57 PRO PRO B . n D 4 45 PHE 45 58 58 PHE PHE B . n D 4 46 PHE 46 59 59 PHE PHE B . n D 4 47 SER 47 60 60 SER SER B . n D 4 48 ASN 48 61 61 ASN ASN B . n D 4 49 VAL 49 62 62 VAL VAL B . n D 4 50 THR 50 63 63 THR THR B . n D 4 51 TRP 51 64 64 TRP TRP B . n D 4 52 PHE 52 65 65 PHE PHE B . n D 4 53 HIS 53 66 66 HIS HIS B . n D 4 54 VAL 54 67 67 VAL VAL B . n D 4 55 ILE 55 68 68 ILE ILE B . n D 4 56 SER 56 71 ? ? ? B . n D 4 57 GLY 57 72 ? ? ? B . n D 4 58 THR 58 73 ? ? ? B . n D 4 59 ASN 59 74 ? ? ? B . n D 4 60 GLY 60 75 ? ? ? B . n D 4 61 THR 61 76 ? ? ? B . n D 4 62 LYS 62 77 77 LYS LYS B . n D 4 63 ARG 63 78 78 ARG ARG B . n D 4 64 PHE 64 79 79 PHE PHE B . n D 4 65 ASP 65 80 80 ASP ASP B . n D 4 66 ASN 66 81 81 ASN ASN B . n D 4 67 PRO 67 82 82 PRO PRO B . n D 4 68 VAL 68 83 83 VAL VAL B . n D 4 69 LEU 69 84 84 LEU LEU B . n D 4 70 PRO 70 85 85 PRO PRO B . n D 4 71 PHE 71 86 86 PHE PHE B . n D 4 72 ASN 72 87 87 ASN ASN B . n D 4 73 ASP 73 88 88 ASP ASP B . n D 4 74 GLY 74 89 89 GLY GLY B . n D 4 75 VAL 75 90 90 VAL VAL B . n D 4 76 TYR 76 91 91 TYR TYR B . n D 4 77 PHE 77 92 92 PHE PHE B . n D 4 78 ALA 78 93 93 ALA ALA B . n D 4 79 SER 79 94 94 SER SER B . n D 4 80 ILE 80 95 95 ILE ILE B . n D 4 81 GLU 81 96 96 GLU GLU B . n D 4 82 LYS 82 97 97 LYS LYS B . n D 4 83 SER 83 98 98 SER SER B . n D 4 84 ASN 84 99 99 ASN ASN B . n D 4 85 ILE 85 100 100 ILE ILE B . n D 4 86 ILE 86 101 101 ILE ILE B . n D 4 87 ARG 87 102 102 ARG ARG B . n D 4 88 GLY 88 103 103 GLY GLY B . n D 4 89 TRP 89 104 104 TRP TRP B . n D 4 90 ILE 90 105 105 ILE ILE B . n D 4 91 PHE 91 106 106 PHE PHE B . n D 4 92 GLY 92 107 107 GLY GLY B . n D 4 93 THR 93 108 108 THR THR B . n D 4 94 THR 94 109 109 THR THR B . n D 4 95 LEU 95 110 110 LEU LEU B . n D 4 96 ASP 96 111 111 ASP ASP B . n D 4 97 SER 97 112 112 SER SER B . n D 4 98 LYS 98 113 113 LYS LYS B . n D 4 99 THR 99 114 114 THR THR B . n D 4 100 GLN 100 115 115 GLN GLN B . n D 4 101 SER 101 116 116 SER SER B . n D 4 102 LEU 102 117 117 LEU LEU B . n D 4 103 LEU 103 118 118 LEU LEU B . n D 4 104 ILE 104 119 119 ILE ILE B . n D 4 105 VAL 105 120 120 VAL VAL B . n D 4 106 ASN 106 121 121 ASN ASN B . n D 4 107 ASN 107 122 122 ASN ASN B . n D 4 108 ALA 108 123 123 ALA ALA B . n D 4 109 THR 109 124 124 THR THR B . n D 4 110 ASN 110 125 125 ASN ASN B . n D 4 111 VAL 111 126 126 VAL VAL B . n D 4 112 VAL 112 127 127 VAL VAL B . n D 4 113 ILE 113 128 128 ILE ILE B . n D 4 114 LYS 114 129 129 LYS LYS B . n D 4 115 VAL 115 130 130 VAL VAL B . n D 4 116 CYS 116 131 131 CYS CYS B . n D 4 117 GLU 117 132 132 GLU GLU B . n D 4 118 PHE 118 133 133 PHE PHE B . n D 4 119 GLN 119 134 134 GLN GLN B . n D 4 120 PHE 120 135 135 PHE PHE B . n D 4 121 CYS 121 136 136 CYS CYS B . n D 4 122 ASN 122 137 137 ASN ASN B . n D 4 123 ASP 123 138 138 ASP ASP B . n D 4 124 PRO 124 139 139 PRO PRO B . n D 4 125 PHE 125 140 140 PHE PHE B . n D 4 126 LEU 126 141 141 LEU LEU B . n D 4 127 ASP 127 142 142 ASP ASP B . n D 4 128 HIS 128 146 ? ? ? B . n D 4 129 LYS 129 147 ? ? ? B . n D 4 130 ASN 130 148 ? ? ? B . n D 4 131 ASN 131 149 ? ? ? B . n D 4 132 LYS 132 150 ? ? ? B . n D 4 133 SER 133 151 ? ? ? B . n D 4 134 TRP 134 152 ? ? ? B . n D 4 135 MET 135 153 153 MET MET B . n D 4 136 GLU 136 154 154 GLU GLU B . n D 4 137 SER 137 155 155 SER SER B . n D 4 138 GLU 138 156 156 GLU GLU B . n D 4 139 PHE 139 157 157 PHE PHE B . n D 4 140 ARG 140 158 158 ARG ARG B . n D 4 141 VAL 141 159 159 VAL VAL B . n D 4 142 TYR 142 160 160 TYR TYR B . n D 4 143 SER 143 161 161 SER SER B . n D 4 144 SER 144 162 162 SER SER B . n D 4 145 ALA 145 163 163 ALA ALA B . n D 4 146 ASN 146 164 164 ASN ASN B . n D 4 147 ASN 147 165 165 ASN ASN B . n D 4 148 CYS 148 166 166 CYS CYS B . n D 4 149 THR 149 167 167 THR THR B . n D 4 150 PHE 150 168 168 PHE PHE B . n D 4 151 GLU 151 169 169 GLU GLU B . n D 4 152 TYR 152 170 170 TYR TYR B . n D 4 153 VAL 153 171 171 VAL VAL B . n D 4 154 SER 154 172 172 SER SER B . n D 4 155 GLN 155 173 173 GLN GLN B . n D 4 156 PRO 156 174 174 PRO PRO B . n D 4 157 PHE 157 175 175 PHE PHE B . n D 4 158 LEU 158 176 176 LEU LEU B . n D 4 159 MET 159 177 ? ? ? B . n D 4 160 ASP 160 178 ? ? ? B . n D 4 161 LEU 161 179 ? ? ? B . n D 4 162 GLU 162 180 ? ? ? B . n D 4 163 GLY 163 181 ? ? ? B . n D 4 164 LYS 164 182 ? ? ? B . n D 4 165 GLN 165 183 ? ? ? B . n D 4 166 GLY 166 184 ? ? ? B . n D 4 167 ASN 167 185 185 ASN ASN B . n D 4 168 PHE 168 186 186 PHE PHE B . n D 4 169 LYS 169 187 187 LYS LYS B . n D 4 170 ASN 170 188 188 ASN ASN B . n D 4 171 LEU 171 189 189 LEU LEU B . n D 4 172 ARG 172 190 190 ARG ARG B . n D 4 173 GLU 173 191 191 GLU GLU B . n D 4 174 PHE 174 192 192 PHE PHE B . n D 4 175 VAL 175 193 193 VAL VAL B . n D 4 176 PHE 176 194 194 PHE PHE B . n D 4 177 LYS 177 195 195 LYS LYS B . n D 4 178 ASN 178 196 196 ASN ASN B . n D 4 179 ILE 179 197 197 ILE ILE B . n D 4 180 ASP 180 198 198 ASP ASP B . n D 4 181 GLY 181 199 199 GLY GLY B . n D 4 182 TYR 182 200 200 TYR TYR B . n D 4 183 PHE 183 201 201 PHE PHE B . n D 4 184 LYS 184 202 202 LYS LYS B . n D 4 185 ILE 185 203 203 ILE ILE B . n D 4 186 TYR 186 204 204 TYR TYR B . n D 4 187 SER 187 205 205 SER SER B . n D 4 188 LYS 188 206 206 LYS LYS B . n D 4 189 HIS 189 207 207 HIS HIS B . n D 4 190 THR 190 208 208 THR THR B . n D 4 191 PRO 191 209 209 PRO PRO B . n D 4 192 ILE 192 210 210 ILE ILE B . n D 4 193 ILE 193 210 ? ? ? B A n D 4 194 VAL 194 210 ? ? ? B B n D 4 195 ARG 195 210 ? ? ? B C n D 4 196 GLU 196 210 ? ? ? B D n D 4 197 PRO 197 210 ? ? ? B E n D 4 198 GLU 198 210 ? ? ? B F n D 4 199 ASP 199 215 215 ASP ASP B . n D 4 200 LEU 200 216 216 LEU LEU B . n D 4 201 PRO 201 217 217 PRO PRO B . n D 4 202 GLN 202 218 218 GLN GLN B . n D 4 203 GLY 203 219 219 GLY GLY B . n D 4 204 PHE 204 220 220 PHE PHE B . n D 4 205 SER 205 221 221 SER SER B . n D 4 206 ALA 206 222 222 ALA ALA B . n D 4 207 LEU 207 223 223 LEU LEU B . n D 4 208 GLU 208 224 224 GLU GLU B . n D 4 209 PRO 209 225 225 PRO PRO B . n D 4 210 LEU 210 226 226 LEU LEU B . n D 4 211 VAL 211 227 227 VAL VAL B . n D 4 212 ASP 212 228 228 ASP ASP B . n D 4 213 LEU 213 229 229 LEU LEU B . n D 4 214 PRO 214 230 230 PRO PRO B . n D 4 215 ILE 215 231 231 ILE ILE B . n D 4 216 GLY 216 232 232 GLY GLY B . n D 4 217 ILE 217 233 233 ILE ILE B . n D 4 218 ASN 218 234 234 ASN ASN B . n D 4 219 ILE 219 235 235 ILE ILE B . n D 4 220 THR 220 236 236 THR THR B . n D 4 221 ARG 221 237 237 ARG ARG B . n D 4 222 PHE 222 238 238 PHE PHE B . n D 4 223 GLN 223 239 239 GLN GLN B . n D 4 224 THR 224 240 240 THR THR B . n D 4 225 LEU 225 241 241 LEU LEU B . n D 4 226 LEU 226 242 242 LEU LEU B . n D 4 227 ALA 227 243 243 ALA ALA B . n D 4 228 LEU 228 244 244 LEU LEU B . n D 4 229 HIS 229 245 245 HIS HIS B . n D 4 230 ARG 230 246 246 ARG ARG B . n D 4 231 SER 231 247 247 SER SER B . n D 4 232 TYR 232 248 ? ? ? B . n D 4 233 LEU 233 249 ? ? ? B . n D 4 234 THR 234 250 ? ? ? B . n D 4 235 PRO 235 251 ? ? ? B . n D 4 236 GLY 236 252 ? ? ? B . n D 4 237 ASP 237 253 ? ? ? B . n D 4 238 SER 238 254 ? ? ? B . n D 4 239 SER 239 255 ? ? ? B . n D 4 240 SER 240 256 ? ? ? B . n D 4 241 GLY 241 257 257 GLY GLY B . n D 4 242 TRP 242 258 258 TRP TRP B . n D 4 243 THR 243 259 259 THR THR B . n D 4 244 ALA 244 260 260 ALA ALA B . n D 4 245 GLY 245 261 261 GLY GLY B . n D 4 246 ALA 246 262 262 ALA ALA B . n D 4 247 ALA 247 263 263 ALA ALA B . n D 4 248 ALA 248 264 264 ALA ALA B . n D 4 249 TYR 249 265 265 TYR TYR B . n D 4 250 TYR 250 266 266 TYR TYR B . n D 4 251 VAL 251 267 267 VAL VAL B . n D 4 252 GLY 252 268 268 GLY GLY B . n D 4 253 TYR 253 269 269 TYR TYR B . n D 4 254 LEU 254 270 270 LEU LEU B . n D 4 255 GLN 255 271 271 GLN GLN B . n D 4 256 PRO 256 272 272 PRO PRO B . n D 4 257 ARG 257 273 273 ARG ARG B . n D 4 258 THR 258 274 274 THR THR B . n D 4 259 PHE 259 275 275 PHE PHE B . n D 4 260 LEU 260 276 276 LEU LEU B . n D 4 261 LEU 261 277 277 LEU LEU B . n D 4 262 LYS 262 278 278 LYS LYS B . n D 4 263 TYR 263 279 279 TYR TYR B . n D 4 264 ASN 264 280 280 ASN ASN B . n D 4 265 GLU 265 281 281 GLU GLU B . n D 4 266 ASN 266 282 282 ASN ASN B . n D 4 267 GLY 267 283 283 GLY GLY B . n D 4 268 THR 268 284 284 THR THR B . n D 4 269 ILE 269 285 285 ILE ILE B . n D 4 270 THR 270 286 286 THR THR B . n D 4 271 ASP 271 287 287 ASP ASP B . n D 4 272 ALA 272 288 288 ALA ALA B . n D 4 273 VAL 273 289 289 VAL VAL B . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 he_jun@gibh.ac.cn Jun He ? 'principal investigator/group leader' 0000-0003-0270-9729 5 xiong_xiaoli@gibh.ac.cn Xiaoli Xiong ? 'principal investigator/group leader' 0000-0002-4632-9122 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 601 1306 NAG NAG C . F 5 NAG 1 602 1307 NAG NAG C . G 5 NAG 1 1301 1301 NAG NAG B . H 5 NAG 1 1302 1302 NAG NAG B . I 5 NAG 1 1303 1303 NAG NAG B . J 5 NAG 1 1304 1304 NAG NAG B . K 5 NAG 1 1305 1305 NAG NAG B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-01-25 2 'Structure model' 1 1 2023-05-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.20.1_4487: _software.pdbx_ordinal 1 # _pdbx_entry_details.entry_id 8HC6 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HC6 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8HC6 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.69 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 287435 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'SARS-CoV-2 Omicron BA.1 Spike (6P) in complex with YB13-292 Fab, focused refinement of RBD region' ? ? ? '1, 2, 3, 4' 2 1 RECOMBINANT COMPLEX 'SARS-CoV-2 Omicron BA.1 Spike protein' ? ? ? 1,4 3 1 RECOMBINANT COMPLEX 'YB13-292 Fab' ? ? ? 2,3 # _em_imaging.entry_id 8HC6 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TALOS ARCTICA' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8HC6 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 295 _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HC6 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA C 352 ? ? -96.68 59.19 2 1 ASP C 428 ? ? -95.92 30.05 3 1 CYS C 525 ? ? -124.06 -53.41 4 1 ASP C 571 ? ? 67.03 -1.49 5 1 PRO C 579 ? ? -83.16 47.66 6 1 ASP H 101 ? ? 74.53 -8.66 7 1 THR L 110 ? ? 34.60 46.93 8 1 PRO L 142 ? ? -84.10 -159.02 9 1 ASN B 81 ? ? -154.24 72.84 10 1 THR B 236 ? ? -130.78 -37.69 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H LYS 132 ? B LYS 132 2 1 Y 1 H SER 133 ? B SER 133 3 1 Y 1 H THR 134 ? B THR 134 4 1 Y 1 H SER 135 ? B SER 135 5 1 Y 1 H GLY 136 ? B GLY 136 6 1 Y 1 H GLY 137 ? B GLY 137 7 1 Y 1 B SER 71 ? D SER 56 8 1 Y 1 B GLY 72 ? D GLY 57 9 1 Y 1 B THR 73 ? D THR 58 10 1 Y 1 B ASN 74 ? D ASN 59 11 1 Y 1 B GLY 75 ? D GLY 60 12 1 Y 1 B THR 76 ? D THR 61 13 1 Y 1 B HIS 146 ? D HIS 128 14 1 Y 1 B LYS 147 ? D LYS 129 15 1 Y 1 B ASN 148 ? D ASN 130 16 1 Y 1 B ASN 149 ? D ASN 131 17 1 Y 1 B LYS 150 ? D LYS 132 18 1 Y 1 B SER 151 ? D SER 133 19 1 Y 1 B TRP 152 ? D TRP 134 20 1 Y 1 B MET 177 ? D MET 159 21 1 Y 1 B ASP 178 ? D ASP 160 22 1 Y 1 B LEU 179 ? D LEU 161 23 1 Y 1 B GLU 180 ? D GLU 162 24 1 Y 1 B GLY 181 ? D GLY 163 25 1 Y 1 B LYS 182 ? D LYS 164 26 1 Y 1 B GLN 183 ? D GLN 165 27 1 Y 1 B GLY 184 ? D GLY 166 28 1 Y 1 B ILE 210 A D ILE 193 29 1 Y 1 B VAL 210 B D VAL 194 30 1 Y 1 B ARG 210 C D ARG 195 31 1 Y 1 B GLU 210 D D GLU 196 32 1 Y 1 B PRO 210 E D PRO 197 33 1 Y 1 B GLU 210 F D GLU 198 34 1 Y 1 B TYR 248 ? D TYR 232 35 1 Y 1 B LEU 249 ? D LEU 233 36 1 Y 1 B THR 250 ? D THR 234 37 1 Y 1 B PRO 251 ? D PRO 235 38 1 Y 1 B GLY 252 ? D GLY 236 39 1 Y 1 B ASP 253 ? D ASP 237 40 1 Y 1 B SER 254 ? D SER 238 41 1 Y 1 B SER 255 ? D SER 239 42 1 Y 1 B SER 256 ? D SER 240 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue ? ? 2 2 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? 3 3 9606 'Homo sapiens' ? ? ? ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 4.0 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Other government' ? EKPG21-06 1 'Other government' ? 2021A1515011289 2 'Other government' ? GRMH-GL 3 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #