HEADER METAL BINDING PROTEIN 03-NOV-22 8HCT TITLE CRYSTAL STRUCTURE OF CU2+ BINDING TO DENDRORHYNCHUS ZHEJIANGENSIS TITLE 2 FERRITIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRITIN; COMPND 3 CHAIN: A; COMPND 4 EC: 1.16.3.1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENDRORHYNCHUS; SOURCE 3 ORGANISM_TAXID: 1343489; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CU2+-BOUND DZFER, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.H.MING,X.R.SU,C.H.HUO REVDAT 2 29-MAY-24 8HCT 1 REMARK REVDAT 1 29-MAR-23 8HCT 0 JRNL AUTH C.HUO,T.MING,Y.WU,H.HUAN,X.QIU,C.LU,Y.LI,Z.ZHANG,J.HAN,X.SU JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF SILVER/COPPER JRNL TITL 2 BINDING BY DENDRORHYNCHUS ZHEJIANGENSIS FERRITIN. JRNL REF POLYMERS (BASEL) V. 15 2023 JRNL REFN ISSN 2073-4360 JRNL PMID 36904538 JRNL DOI 10.3390/POLYM15051297 REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC CCP4-7.0.024 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 106.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 13361 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 667 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1366 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 155 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.175 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.177 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8HCT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300032447. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL18U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13361 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 106.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 80.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.97 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE, 0.1 M TRIS HYDROCHLORIDE PH 8.5, 30% V/V POLYETHYENE REMARK 280 GLYCOL 400, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 27555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 28555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 31555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 32555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 35555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 36555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 37555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 38555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 39555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 40555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 41555 X+1/2,Z+1/2,-Y+1/2 REMARK 290 42555 -X+1/2,Z+1/2,Y+1/2 REMARK 290 43555 -X+1/2,-Z+1/2,-Y+1/2 REMARK 290 44555 X+1/2,-Z+1/2,Y+1/2 REMARK 290 45555 Z+1/2,Y+1/2,-X+1/2 REMARK 290 46555 Z+1/2,-Y+1/2,X+1/2 REMARK 290 47555 -Z+1/2,Y+1/2,X+1/2 REMARK 290 48555 -Z+1/2,-Y+1/2,-X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 75.50550 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 75.50550 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 75.50550 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 75.50550 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 75.50550 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 75.50550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 24-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 24-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 122320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 128980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2236.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 302.02200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 302.02200 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 151.01100 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 151.01100 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 151.01100 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 151.01100 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT2 13 1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 14 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT2 14 -1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 15 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT2 15 -1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 16 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT2 16 1.000000 0.000000 0.000000 151.01100 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 17 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 17 0.000000 0.000000 1.000000 151.01100 REMARK 350 BIOMT3 17 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 151.01100 REMARK 350 BIOMT3 18 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 19 0.000000 0.000000 -1.000000 151.01100 REMARK 350 BIOMT3 19 0.000000 -1.000000 0.000000 151.01100 REMARK 350 BIOMT1 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 20 0.000000 0.000000 -1.000000 151.01100 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 -151.01100 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 302.02200 REMARK 350 BIOMT3 22 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 23 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 24 0.000000 -1.000000 0.000000 302.02200 REMARK 350 BIOMT3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CU CU A 204 LIES ON A SPECIAL POSITION. REMARK 375 CU CU A 205 LIES ON A SPECIAL POSITION. REMARK 375 CU CU A 206 LIES ON A SPECIAL POSITION. REMARK 375 CU CU A 207 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 40 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 153 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 42 -58.12 -122.02 REMARK 500 ASN A 168 -31.40 -171.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 23 OE1 REMARK 620 2 GLU A 58 OE1 79.6 REMARK 620 3 HIS A 61 ND1 120.7 99.4 REMARK 620 4 HOH A 311 O 120.1 80.6 118.0 REMARK 620 5 HOH A 326 O 98.2 157.6 100.8 81.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 205 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CU A 206 CU REMARK 620 2 CU A 206 CU 0.0 REMARK 620 3 HOH A 374 O 104.5 104.5 REMARK 620 4 HOH A 374 O 110.2 110.2 110.4 REMARK 620 N 1 2 3 DBREF1 8HCT A 1 169 UNP A0A8F4Y4C2_9BILA DBREF2 8HCT A A0A8F4Y4C2 1 169 SEQRES 1 A 169 MET SER LEU CYS ARG GLN ASN TYR HIS GLU GLU CYS GLU SEQRES 2 A 169 ALA GLY VAL ASN LYS GLN ILE ASN MET GLU PHE TYR ALA SEQRES 3 A 169 SER TYR VAL TYR MET SER MET ALA SER HIS PHE ASP ARG SEQRES 4 A 169 ASP ASP VAL ALA LEU LYS GLY ALA HIS GLU PHE PHE LEU SEQRES 5 A 169 LYS SER SER SER GLU GLU ARG GLU HIS ALA MET ARG LEU SEQRES 6 A 169 ILE LYS PHE GLN ASN GLN ARG GLY GLY ARG VAL VAL TYR SEQRES 7 A 169 GLN ASP ILE LYS LYS PRO GLU LYS ASP ALA TRP GLY THR SEQRES 8 A 169 LEU THR ASP ALA MET GLN ALA ALA LEU ASP LEU GLU LYS SEQRES 9 A 169 HIS VAL ASN GLN ALA LEU LEU ASP LEU HIS ALA LEU ALA SEQRES 10 A 169 SER LYS HIS ASN ASP PRO GLN MET CYS ASP PHE ILE GLU SEQRES 11 A 169 ASN HIS TYR LEU THR GLU GLN VAL GLU ALA ILE ARG GLU SEQRES 12 A 169 ILE SER GLY TYR LEU THR ASN LEU LYS ARG CYS GLY PRO SEQRES 13 A 169 GLY LEU GLY GLU PHE LEU PHE ASP LYS GLU LEU ASN SER HET FE A 201 1 HET FE A 202 1 HET CU A 203 1 HET CU A 204 1 HET CU A 205 1 HET CU A 206 1 HET CU A 207 1 HET GOL A 208 6 HETNAM FE FE (III) ION HETNAM CU COPPER (II) ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FE 2(FE 3+) FORMUL 4 CU 5(CU 2+) FORMUL 9 GOL C3 H8 O3 FORMUL 10 HOH *155(H2 O) HELIX 1 AA1 HIS A 9 ASP A 38 1 30 HELIX 2 AA2 LEU A 44 GLY A 73 1 30 HELIX 3 AA3 THR A 91 HIS A 120 1 30 HELIX 4 AA4 ASP A 122 TYR A 133 1 12 HELIX 5 AA5 TYR A 133 GLY A 155 1 23 HELIX 6 AA6 GLY A 157 ASN A 168 1 12 LINK OE1 GLU A 23 FE FE A 201 1555 1555 1.97 LINK OE1 GLU A 58 FE FE A 201 1555 1555 1.95 LINK ND1 HIS A 61 FE FE A 201 1555 1555 2.17 LINK FE FE A 201 O HOH A 311 1555 1555 2.20 LINK FE FE A 201 O HOH A 326 1555 1555 2.26 LINK FE FE A 202 O HOH A 417 1555 1555 2.77 LINK CU CU A 203 O HOH A 369 1555 1555 2.65 LINK CU CU A 205 CU CU A 206 1555 1555 2.57 LINK CU CU A 205 CU CU A 206 1555 6566 2.57 LINK CU CU A 205 O HOH A 374 1555 1555 2.45 LINK CU CU A 205 O HOH A 374 1555 6566 2.26 CRYST1 151.011 151.011 151.011 90.00 90.00 90.00 I 4 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006622 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006622 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006622 0.00000