HEADER BIOSYNTHETIC PROTEIN 04-NOV-22 8HDF TITLE FULL LENGTH CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FADD23 IN TITLE 2 COMPLEX WITH ANP AND PLM COMPND MOL_ID: 1; COMPND 2 MOLECULE: LONG-CHAIN-FATTY-ACID--AMP LIGASE FADD23; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FAAL23,LONG-CHAIN FATTY ACID ADENYLYLTRANSFERASE FADD23, COMPND 5 LONG-CHAIN-FATTY-ACID ADENYLASE/TRANSFERASE FADD23; COMPND 6 EC: 6.2.1.57; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 GENE: FADD23, RV3826; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LONG-CHAIN-FATTY-ACID--AMP LIGASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.R.YAN,X.LIU,W.ZHANG,Z.H.RAO REVDAT 2 22-MAR-23 8HDF 1 JRNL REVDAT 1 15-FEB-23 8HDF 0 JRNL AUTH M.YAN,L.CAO,L.ZHAO,W.ZHOU,X.LIU,W.ZHANG,Z.RAO JRNL TITL THE KEY ROLES OF MYCOBACTERIUM TUBERCULOSIS FADD23 JRNL TITL 2 C-TERMINAL DOMAIN IN CATALYTIC MECHANISMS. JRNL REF FRONT MICROBIOL V. 14 90534 2023 JRNL REFN ESSN 1664-302X JRNL PMID 36896429 JRNL DOI 10.3389/FMICB.2023.1090534 REMARK 2 REMARK 2 RESOLUTION. 2.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1803 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4100 - 5.2700 1.00 2973 154 0.1916 0.2213 REMARK 3 2 5.2700 - 4.1800 1.00 2770 134 0.1601 0.2353 REMARK 3 3 4.1800 - 3.6500 1.00 2687 129 0.1829 0.2292 REMARK 3 4 3.6500 - 3.3200 1.00 2647 142 0.2119 0.2650 REMARK 3 5 3.3200 - 3.0800 1.00 2659 146 0.2349 0.2699 REMARK 3 6 3.0800 - 2.9000 1.00 2618 139 0.2549 0.3100 REMARK 3 7 2.9000 - 2.7500 1.00 2622 133 0.2513 0.2782 REMARK 3 8 2.7500 - 2.6300 1.00 2590 140 0.2486 0.2915 REMARK 3 9 2.6300 - 2.5300 1.00 2588 140 0.2556 0.2997 REMARK 3 10 2.5300 - 2.4500 1.00 2581 130 0.2548 0.3055 REMARK 3 11 2.4500 - 2.3700 1.00 2566 152 0.2647 0.3526 REMARK 3 12 2.3700 - 2.3000 1.00 2585 130 0.2727 0.3387 REMARK 3 13 2.3000 - 2.2400 0.99 2539 134 0.2890 0.3351 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.420 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4254 REMARK 3 ANGLE : 0.977 5803 REMARK 3 CHIRALITY : 0.055 671 REMARK 3 PLANARITY : 0.006 748 REMARK 3 DIHEDRAL : 12.036 601 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.7038 16.9839 215.2789 REMARK 3 T TENSOR REMARK 3 T11: 0.3583 T22: 0.5496 REMARK 3 T33: 0.5298 T12: -0.0155 REMARK 3 T13: 0.0273 T23: -0.1005 REMARK 3 L TENSOR REMARK 3 L11: 1.6766 L22: 1.4418 REMARK 3 L33: 2.4775 L12: 0.0054 REMARK 3 L13: 0.1996 L23: 0.1932 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: 0.0940 S13: -0.1982 REMARK 3 S21: -0.2093 S22: 0.1185 S23: -0.1247 REMARK 3 S31: 0.2721 S32: 0.0155 S33: -0.0010 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.5858 32.2806 216.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.2724 T22: 0.6706 REMARK 3 T33: 0.4358 T12: -0.0590 REMARK 3 T13: -0.0446 T23: -0.0417 REMARK 3 L TENSOR REMARK 3 L11: 0.4851 L22: 1.2711 REMARK 3 L33: 0.9417 L12: 0.1015 REMARK 3 L13: -0.1799 L23: -0.0731 REMARK 3 S TENSOR REMARK 3 S11: -0.1343 S12: 0.1185 S13: -0.0840 REMARK 3 S21: -0.2191 S22: 0.1105 S23: 0.1338 REMARK 3 S31: -0.0602 S32: -0.1591 S33: 0.0002 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7434 51.3242 222.2754 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.5650 REMARK 3 T33: 0.4093 T12: -0.0304 REMARK 3 T13: -0.0159 T23: -0.1452 REMARK 3 L TENSOR REMARK 3 L11: 0.6879 L22: 1.7426 REMARK 3 L33: 0.8480 L12: -0.3747 REMARK 3 L13: -0.2847 L23: -0.1654 REMARK 3 S TENSOR REMARK 3 S11: -0.0210 S12: -0.5490 S13: 0.1556 REMARK 3 S21: -0.1311 S22: 0.0905 S23: -0.1718 REMARK 3 S31: -0.2425 S32: 0.0540 S33: 0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.9991 53.2155 202.6597 REMARK 3 T TENSOR REMARK 3 T11: 0.7232 T22: 0.5028 REMARK 3 T33: 0.5194 T12: -0.0479 REMARK 3 T13: 0.1964 T23: -0.1480 REMARK 3 L TENSOR REMARK 3 L11: 0.4631 L22: 0.7262 REMARK 3 L33: 0.4863 L12: 0.1193 REMARK 3 L13: 0.2832 L23: -0.4239 REMARK 3 S TENSOR REMARK 3 S11: -0.2638 S12: -0.0406 S13: -0.1539 REMARK 3 S21: 0.5969 S22: -0.4137 S23: -0.2746 REMARK 3 S31: 0.1627 S32: -0.1249 S33: -0.1231 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 575 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0044 49.3885 192.7680 REMARK 3 T TENSOR REMARK 3 T11: 0.7359 T22: 0.4500 REMARK 3 T33: 0.5076 T12: 0.0155 REMARK 3 T13: 0.1626 T23: -0.0895 REMARK 3 L TENSOR REMARK 3 L11: 1.3956 L22: 1.9203 REMARK 3 L33: 1.7856 L12: 0.2697 REMARK 3 L13: -0.4131 L23: 0.5111 REMARK 3 S TENSOR REMARK 3 S11: -0.3313 S12: 0.0181 S13: -0.0356 REMARK 3 S21: 0.6356 S22: -0.0526 S23: 0.2503 REMARK 3 S31: 0.8289 S32: -0.0433 S33: -0.0066 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8HDF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 09-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300033399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97853 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36391 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.240 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.130 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3E53 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 70 MM TRIS PH 8.5, 140 MM SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE, 140 MM AMMONIUM PHOSPHATE MONOBASIC, REMARK 280 35% W/V (+/-)-2-METHYL-2,4-PENTANEDIOL, AND 14% (W/V) REMARK 280 POLYETHYLENE GLYCOL 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 152.63600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 305.27200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 228.95400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 381.59000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.31800 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 152.63600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 305.27200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 381.59000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 228.95400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 76.31800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 LEU A 96 REMARK 465 GLY A 97 REMARK 465 GLY A 98 REMARK 465 ALA A 99 REMARK 465 SER A 100 REMARK 465 GLY A 124 REMARK 465 ASP A 125 REMARK 465 VAL A 126 REMARK 465 VAL A 127 REMARK 465 PRO A 128 REMARK 465 ARG A 129 REMARK 465 VAL A 130 REMARK 465 THR A 131 REMARK 465 PRO A 132 REMARK 465 PRO A 133 REMARK 465 PRO A 134 REMARK 465 GLY A 135 REMARK 465 ILE A 136 REMARK 465 ALA A 137 REMARK 465 ARG A 154 REMARK 465 SER A 155 REMARK 465 ASN A 156 REMARK 465 ILE A 157 REMARK 465 VAL A 158 REMARK 465 ASP A 159 REMARK 465 SER A 172 REMARK 465 GLY A 173 REMARK 465 SER A 174 REMARK 465 THR A 175 REMARK 465 ARG A 176 REMARK 465 GLY A 512 REMARK 465 ASN A 513 REMARK 465 LEU A 514 REMARK 465 ALA A 576 REMARK 465 LYS A 577 REMARK 465 PRO A 578 REMARK 465 LEU A 579 REMARK 465 GLN A 580 REMARK 465 ALA A 581 REMARK 465 SER A 582 REMARK 465 ASP A 583 REMARK 465 LEU A 584 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 164 -99.96 -119.12 REMARK 500 LEU A 285 30.58 -99.14 REMARK 500 SER A 300 -7.19 91.88 REMARK 500 THR A 335 -73.28 69.21 REMARK 500 VAL A 336 -39.54 -154.67 REMARK 500 PRO A 382 -175.90 -69.58 REMARK 500 ARG A 486 -3.99 54.59 REMARK 500 HIS A 534 -8.31 -140.34 REMARK 500 THR A 552 173.60 -58.18 REMARK 500 LEU A 574 2.51 -69.14 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HDF A 1 584 UNP P9WQ47 FAA23_MYCTU 1 584 SEQADV 8HDF MET A -20 UNP P9WQ47 INITIATING METHIONINE SEQADV 8HDF GLY A -19 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF SER A -18 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF SER A -17 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -16 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -15 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -14 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -13 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -12 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -11 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF SER A -10 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF SER A -9 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF GLY A -8 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF LEU A -7 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF VAL A -6 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF PRO A -5 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF ARG A -4 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF GLY A -3 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF SER A -2 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF HIS A -1 UNP P9WQ47 EXPRESSION TAG SEQADV 8HDF MET A 0 UNP P9WQ47 EXPRESSION TAG SEQRES 1 A 605 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 605 LEU VAL PRO ARG GLY SER HIS MET MET VAL SER LEU SER SEQRES 3 A 605 ILE PRO SER MET LEU ARG GLN CYS VAL ASN LEU HIS PRO SEQRES 4 A 605 ASP GLY THR ALA PHE THR TYR ILE ASP TYR GLU ARG ASP SEQRES 5 A 605 SER GLU GLY ILE SER GLU SER LEU THR TRP SER GLN VAL SEQRES 6 A 605 TYR ARG ARG THR LEU ASN VAL ALA ALA GLU VAL ARG ARG SEQRES 7 A 605 HIS ALA ALA ILE GLY ASP ARG ALA VAL ILE LEU ALA PRO SEQRES 8 A 605 GLN GLY LEU ASP TYR ILE VAL ALA PHE LEU GLY ALA LEU SEQRES 9 A 605 GLN ALA GLY LEU ILE ALA VAL PRO LEU SER ALA PRO LEU SEQRES 10 A 605 GLY GLY ALA SER ASP GLU ARG VAL ASP ALA VAL VAL ARG SEQRES 11 A 605 ASP ALA LYS PRO ASN VAL VAL LEU THR THR SER ALA ILE SEQRES 12 A 605 MET GLY ASP VAL VAL PRO ARG VAL THR PRO PRO PRO GLY SEQRES 13 A 605 ILE ALA SER PRO PRO THR VAL ALA VAL ASP GLN LEU ASP SEQRES 14 A 605 LEU ASP SER PRO ILE ARG SER ASN ILE VAL ASP ASP SER SEQRES 15 A 605 LEU GLN THR THR ALA TYR LEU GLN TYR THR SER GLY SER SEQRES 16 A 605 THR ARG THR PRO ALA GLY VAL MET ILE THR TYR LYS ASN SEQRES 17 A 605 ILE LEU ALA ASN PHE GLN GLN MET ILE SER ALA TYR PHE SEQRES 18 A 605 ALA ASP THR GLY ALA VAL PRO PRO LEU ASP LEU PHE ILE SEQRES 19 A 605 MET SER TRP LEU PRO PHE TYR HIS ASP MET GLY LEU VAL SEQRES 20 A 605 LEU GLY VAL CYS ALA PRO ILE ILE VAL GLY CYS GLY ALA SEQRES 21 A 605 VAL LEU THR SER PRO VAL ALA PHE LEU GLN ARG PRO ALA SEQRES 22 A 605 ARG TRP LEU GLN LEU MET ALA ARG GLU GLY GLN ALA PHE SEQRES 23 A 605 SER ALA ALA PRO ASN PHE ALA PHE GLU LEU THR ALA ALA SEQRES 24 A 605 LYS ALA ILE ASP ASP ASP LEU ALA GLY LEU ASP LEU GLY SEQRES 25 A 605 ARG ILE LYS THR ILE LEU CYS GLY SER GLU ARG VAL HIS SEQRES 26 A 605 PRO ALA THR LEU LYS ARG PHE VAL ASP ARG PHE SER ARG SEQRES 27 A 605 PHE ASN LEU ARG GLU PHE ALA ILE ARG PRO ALA TYR GLY SEQRES 28 A 605 LEU ALA GLU ALA THR VAL TYR VAL ALA THR SER GLN ALA SEQRES 29 A 605 GLY GLN PRO PRO GLU ILE ARG TYR PHE GLU PRO HIS GLU SEQRES 30 A 605 LEU SER ALA GLY GLN ALA LYS PRO CYS ALA THR GLY ALA SEQRES 31 A 605 GLY THR ALA LEU VAL SER TYR PRO LEU PRO GLN SER PRO SEQRES 32 A 605 ILE VAL ARG ILE VAL ASP PRO ASN THR ASN THR GLU CYS SEQRES 33 A 605 PRO PRO GLY THR ILE GLY GLU ILE TRP VAL HIS GLY ASP SEQRES 34 A 605 ASN VAL ALA GLY GLY TYR TRP GLU LYS PRO ASP GLU THR SEQRES 35 A 605 GLU ARG THR PHE GLY GLY ALA LEU VAL ALA PRO SER ALA SEQRES 36 A 605 GLY THR PRO VAL GLY PRO TRP LEU ARG THR GLY ASP SER SEQRES 37 A 605 GLY PHE VAL SER GLU ASP LYS PHE PHE ILE ILE GLY ARG SEQRES 38 A 605 ILE LYS ASP LEU LEU ILE VAL TYR GLY ARG ASN HIS SER SEQRES 39 A 605 PRO ASP ASP ILE GLU ALA THR ILE GLN GLU ILE THR ARG SEQRES 40 A 605 GLY ARG CYS ALA ALA ILE ALA VAL PRO SER ASN GLY VAL SEQRES 41 A 605 GLU LYS LEU VAL ALA ILE VAL GLU LEU ASN ASN ARG GLY SEQRES 42 A 605 ASN LEU ASP THR GLU ARG LEU SER PHE VAL THR ARG GLU SEQRES 43 A 605 VAL THR SER ALA ILE SER THR SER HIS GLY LEU SER VAL SEQRES 44 A 605 SER ASP LEU VAL LEU VAL ALA PRO GLY SER ILE PRO ILE SEQRES 45 A 605 THR THR SER GLY LYS VAL ARG ARG ALA GLU CYS VAL LYS SEQRES 46 A 605 LEU TYR ARG HIS ASN GLU PHE THR ARG LEU ASP ALA LYS SEQRES 47 A 605 PRO LEU GLN ALA SER ASP LEU HET PLM A 601 18 HET ANP A 602 31 HETNAM PLM PALMITIC ACID HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER FORMUL 2 PLM C16 H32 O2 FORMUL 3 ANP C10 H17 N6 O12 P3 FORMUL 4 HOH *70(H2 O) HELIX 1 AA1 SER A 5 HIS A 17 1 13 HELIX 2 AA2 TRP A 41 ARG A 57 1 17 HELIX 3 AA3 GLY A 72 ALA A 85 1 14 HELIX 4 AA4 GLU A 102 LYS A 112 1 11 HELIX 5 AA5 ASP A 145 LEU A 147 5 3 HELIX 6 AA6 TYR A 185 PHE A 200 1 16 HELIX 7 AA7 ALA A 201 GLY A 204 5 4 HELIX 8 AA8 HIS A 221 VAL A 229 1 9 HELIX 9 AA9 CYS A 230 GLY A 236 1 7 HELIX 10 AB1 SER A 243 ARG A 250 1 8 HELIX 11 AB2 PRO A 251 ALA A 259 1 9 HELIX 12 AB3 PRO A 269 ALA A 280 1 12 HELIX 13 AB4 HIS A 304 SER A 316 1 13 HELIX 14 AB5 ARG A 317 ASN A 319 5 3 HELIX 15 AB6 ARG A 321 PHE A 323 5 3 HELIX 16 AB7 LEU A 331 THR A 335 5 5 HELIX 17 AB8 GLU A 353 ALA A 359 1 7 HELIX 18 AB9 LYS A 417 GLY A 426 1 10 HELIX 19 AC1 LYS A 462 LEU A 464 5 3 HELIX 20 AC2 SER A 473 ARG A 486 1 14 HELIX 21 AC3 THR A 516 GLY A 535 1 20 HELIX 22 AC4 ARG A 558 HIS A 568 1 11 SHEET 1 AA1 8 ILE A 35 THR A 40 0 SHEET 2 AA1 8 THR A 21 ASP A 27 -1 N ASP A 27 O ILE A 35 SHEET 3 AA1 8 GLY A 238 LEU A 241 1 O LEU A 241 N ILE A 26 SHEET 4 AA1 8 LEU A 211 SER A 215 1 N ILE A 213 O VAL A 240 SHEET 5 AA1 8 GLN A 263 ALA A 268 1 O PHE A 265 N MET A 214 SHEET 6 AA1 8 THR A 295 CYS A 298 1 O LEU A 297 N SER A 266 SHEET 7 AA1 8 ILE A 325 TYR A 329 1 O ALA A 328 N CYS A 298 SHEET 8 AA1 8 ALA A 339 THR A 340 -1 O ALA A 339 N TYR A 329 SHEET 1 AA2 4 ILE A 88 PRO A 91 0 SHEET 2 AA2 4 ARG A 64 LEU A 68 1 N ALA A 65 O VAL A 90 SHEET 3 AA2 4 VAL A 115 THR A 118 1 O LEU A 117 N VAL A 66 SHEET 4 AA2 4 THR A 141 ALA A 143 1 O VAL A 142 N THR A 118 SHEET 1 AA3 2 THR A 165 TYR A 170 0 SHEET 2 AA3 2 GLY A 180 THR A 184 -1 O VAL A 181 N GLN A 169 SHEET 1 AA4 2 ILE A 349 PHE A 352 0 SHEET 2 AA4 2 THR A 371 VAL A 374 -1 O THR A 371 N PHE A 352 SHEET 1 AA5 5 TYR A 376 PRO A 377 0 SHEET 2 AA5 5 LYS A 454 ARG A 460 -1 O PHE A 455 N TYR A 376 SHEET 3 AA5 5 LEU A 442 SER A 451 -1 N SER A 447 O GLY A 459 SHEET 4 AA5 5 GLY A 401 HIS A 406 -1 N VAL A 405 O LEU A 442 SHEET 5 AA5 5 ILE A 383 VAL A 387 -1 N VAL A 387 O GLU A 402 SHEET 1 AA6 2 LEU A 465 VAL A 467 0 SHEET 2 AA6 2 ARG A 470 HIS A 472 -1 O HIS A 472 N LEU A 465 SHEET 1 AA7 3 CYS A 489 SER A 496 0 SHEET 2 AA7 3 VAL A 499 GLU A 507 -1 O LYS A 501 N VAL A 494 SHEET 3 AA7 3 ASP A 540 VAL A 544 1 O VAL A 542 N VAL A 506 CISPEP 1 SER A 381 PRO A 382 0 -0.72 CISPEP 2 GLY A 439 PRO A 440 0 -10.09 CRYST1 72.837 72.837 457.908 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013729 0.007927 0.000000 0.00000 SCALE2 0.000000 0.015853 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002184 0.00000