data_8HGJ # _entry.id 8HGJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HGJ pdb_00008hgj 10.2210/pdb8hgj/pdb WWPDB D_1300033582 ? ? EMDB EMD-34740 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex' _pdbx_database_related.db_id EMD-34740 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HGJ _pdbx_database_status.recvd_initial_deposition_date 2022-11-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Han, C.W.' 1 0000-0001-5125-886X 'Jang, S.B.' 2 0000-0002-2266-0937 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Han, C.W.' 1 0000-0001-5125-886X primary 'Jang, S.B.' 2 0000-0002-2266-0937 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8HGJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HGJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin 31495.289 1 ? ? ? ? 2 polymer man 'Hepatitis A virus cellular receptor 2' 12081.810 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name ;HAVcr-2,T-cell immunoglobulin and mucin domain-containing protein 3,TIMD-3,T-cell immunoglobulin mucin receptor 3,TIM-3,T-cell membrane protein 3 ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MATETNYPVPYRSKLTEPFEPGQTLIIKGKTAEDSVRFTINLHNTSADFSGNDVPLHISVRFDEGKIVFNTFSKGEWGKE ERKSNPYKKGDDIDIRIRAHDSKFSISVDQKEVKEYEHRVPLSSVTHFSVDGDILITYIHWGGKYYPVPYESGLAGDGLA PGKSLLIFATPEKKGKRFHINLLKKNGDIALHFNPRFDEKAIVRNSLISGEWGNEEREGKNPLEKGIGCDLEFRNEEYAF QIYVDGERFATYAHRLDPHDINGLQIGGDVEVTGIQMV ; ;MATETNYPVPYRSKLTEPFEPGQTLIIKGKTAEDSVRFTINLHNTSADFSGNDVPLHISVRFDEGKIVFNTFSKGEWGKE ERKSNPYKKGDDIDIRIRAHDSKFSISVDQKEVKEYEHRVPLSSVTHFSVDGDILITYIHWGGKYYPVPYESGLAGDGLA PGKSLLIFATPEKKGKRFHINLLKKNGDIALHFNPRFDEKAIVRNSLISGEWGNEEREGKNPLEKGIGCDLEFRNEEYAF QIYVDGERFATYAHRLDPHDINGLQIGGDVEVTGIQMV ; A ? 2 'polypeptide(L)' no no ;VEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGACPVFECGNVVLRTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLA DSGIYCCRIQIPGIMNDEKFNLKLVIK ; ;VEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGACPVFECGNVVLRTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLA DSGIYCCRIQIPGIMNDEKFNLKLVIK ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 GLU n 1 5 THR n 1 6 ASN n 1 7 TYR n 1 8 PRO n 1 9 VAL n 1 10 PRO n 1 11 TYR n 1 12 ARG n 1 13 SER n 1 14 LYS n 1 15 LEU n 1 16 THR n 1 17 GLU n 1 18 PRO n 1 19 PHE n 1 20 GLU n 1 21 PRO n 1 22 GLY n 1 23 GLN n 1 24 THR n 1 25 LEU n 1 26 ILE n 1 27 ILE n 1 28 LYS n 1 29 GLY n 1 30 LYS n 1 31 THR n 1 32 ALA n 1 33 GLU n 1 34 ASP n 1 35 SER n 1 36 VAL n 1 37 ARG n 1 38 PHE n 1 39 THR n 1 40 ILE n 1 41 ASN n 1 42 LEU n 1 43 HIS n 1 44 ASN n 1 45 THR n 1 46 SER n 1 47 ALA n 1 48 ASP n 1 49 PHE n 1 50 SER n 1 51 GLY n 1 52 ASN n 1 53 ASP n 1 54 VAL n 1 55 PRO n 1 56 LEU n 1 57 HIS n 1 58 ILE n 1 59 SER n 1 60 VAL n 1 61 ARG n 1 62 PHE n 1 63 ASP n 1 64 GLU n 1 65 GLY n 1 66 LYS n 1 67 ILE n 1 68 VAL n 1 69 PHE n 1 70 ASN n 1 71 THR n 1 72 PHE n 1 73 SER n 1 74 LYS n 1 75 GLY n 1 76 GLU n 1 77 TRP n 1 78 GLY n 1 79 LYS n 1 80 GLU n 1 81 GLU n 1 82 ARG n 1 83 LYS n 1 84 SER n 1 85 ASN n 1 86 PRO n 1 87 TYR n 1 88 LYS n 1 89 LYS n 1 90 GLY n 1 91 ASP n 1 92 ASP n 1 93 ILE n 1 94 ASP n 1 95 ILE n 1 96 ARG n 1 97 ILE n 1 98 ARG n 1 99 ALA n 1 100 HIS n 1 101 ASP n 1 102 SER n 1 103 LYS n 1 104 PHE n 1 105 SER n 1 106 ILE n 1 107 SER n 1 108 VAL n 1 109 ASP n 1 110 GLN n 1 111 LYS n 1 112 GLU n 1 113 VAL n 1 114 LYS n 1 115 GLU n 1 116 TYR n 1 117 GLU n 1 118 HIS n 1 119 ARG n 1 120 VAL n 1 121 PRO n 1 122 LEU n 1 123 SER n 1 124 SER n 1 125 VAL n 1 126 THR n 1 127 HIS n 1 128 PHE n 1 129 SER n 1 130 VAL n 1 131 ASP n 1 132 GLY n 1 133 ASP n 1 134 ILE n 1 135 LEU n 1 136 ILE n 1 137 THR n 1 138 TYR n 1 139 ILE n 1 140 HIS n 1 141 TRP n 1 142 GLY n 1 143 GLY n 1 144 LYS n 1 145 TYR n 1 146 TYR n 1 147 PRO n 1 148 VAL n 1 149 PRO n 1 150 TYR n 1 151 GLU n 1 152 SER n 1 153 GLY n 1 154 LEU n 1 155 ALA n 1 156 GLY n 1 157 ASP n 1 158 GLY n 1 159 LEU n 1 160 ALA n 1 161 PRO n 1 162 GLY n 1 163 LYS n 1 164 SER n 1 165 LEU n 1 166 LEU n 1 167 ILE n 1 168 PHE n 1 169 ALA n 1 170 THR n 1 171 PRO n 1 172 GLU n 1 173 LYS n 1 174 LYS n 1 175 GLY n 1 176 LYS n 1 177 ARG n 1 178 PHE n 1 179 HIS n 1 180 ILE n 1 181 ASN n 1 182 LEU n 1 183 LEU n 1 184 LYS n 1 185 LYS n 1 186 ASN n 1 187 GLY n 1 188 ASP n 1 189 ILE n 1 190 ALA n 1 191 LEU n 1 192 HIS n 1 193 PHE n 1 194 ASN n 1 195 PRO n 1 196 ARG n 1 197 PHE n 1 198 ASP n 1 199 GLU n 1 200 LYS n 1 201 ALA n 1 202 ILE n 1 203 VAL n 1 204 ARG n 1 205 ASN n 1 206 SER n 1 207 LEU n 1 208 ILE n 1 209 SER n 1 210 GLY n 1 211 GLU n 1 212 TRP n 1 213 GLY n 1 214 ASN n 1 215 GLU n 1 216 GLU n 1 217 ARG n 1 218 GLU n 1 219 GLY n 1 220 LYS n 1 221 ASN n 1 222 PRO n 1 223 LEU n 1 224 GLU n 1 225 LYS n 1 226 GLY n 1 227 ILE n 1 228 GLY n 1 229 CYS n 1 230 ASP n 1 231 LEU n 1 232 GLU n 1 233 PHE n 1 234 ARG n 1 235 ASN n 1 236 GLU n 1 237 GLU n 1 238 TYR n 1 239 ALA n 1 240 PHE n 1 241 GLN n 1 242 ILE n 1 243 TYR n 1 244 VAL n 1 245 ASP n 1 246 GLY n 1 247 GLU n 1 248 ARG n 1 249 PHE n 1 250 ALA n 1 251 THR n 1 252 TYR n 1 253 ALA n 1 254 HIS n 1 255 ARG n 1 256 LEU n 1 257 ASP n 1 258 PRO n 1 259 HIS n 1 260 ASP n 1 261 ILE n 1 262 ASN n 1 263 GLY n 1 264 LEU n 1 265 GLN n 1 266 ILE n 1 267 GLY n 1 268 GLY n 1 269 ASP n 1 270 VAL n 1 271 GLU n 1 272 VAL n 1 273 THR n 1 274 GLY n 1 275 ILE n 1 276 GLN n 1 277 MET n 1 278 VAL n 2 1 VAL n 2 2 GLU n 2 3 TYR n 2 4 ARG n 2 5 ALA n 2 6 GLU n 2 7 VAL n 2 8 GLY n 2 9 GLN n 2 10 ASN n 2 11 ALA n 2 12 TYR n 2 13 LEU n 2 14 PRO n 2 15 CYS n 2 16 PHE n 2 17 TYR n 2 18 THR n 2 19 PRO n 2 20 ALA n 2 21 ALA n 2 22 PRO n 2 23 GLY n 2 24 ASN n 2 25 LEU n 2 26 VAL n 2 27 PRO n 2 28 VAL n 2 29 CYS n 2 30 TRP n 2 31 GLY n 2 32 LYS n 2 33 GLY n 2 34 ALA n 2 35 CYS n 2 36 PRO n 2 37 VAL n 2 38 PHE n 2 39 GLU n 2 40 CYS n 2 41 GLY n 2 42 ASN n 2 43 VAL n 2 44 VAL n 2 45 LEU n 2 46 ARG n 2 47 THR n 2 48 ASP n 2 49 GLU n 2 50 ARG n 2 51 ASP n 2 52 VAL n 2 53 ASN n 2 54 TYR n 2 55 TRP n 2 56 THR n 2 57 SER n 2 58 ARG n 2 59 TYR n 2 60 TRP n 2 61 LEU n 2 62 ASN n 2 63 GLY n 2 64 ASP n 2 65 PHE n 2 66 ARG n 2 67 LYS n 2 68 GLY n 2 69 ASP n 2 70 VAL n 2 71 SER n 2 72 LEU n 2 73 THR n 2 74 ILE n 2 75 GLU n 2 76 ASN n 2 77 VAL n 2 78 THR n 2 79 LEU n 2 80 ALA n 2 81 ASP n 2 82 SER n 2 83 GLY n 2 84 ILE n 2 85 TYR n 2 86 CYS n 2 87 CYS n 2 88 ARG n 2 89 ILE n 2 90 GLN n 2 91 ILE n 2 92 PRO n 2 93 GLY n 2 94 ILE n 2 95 MET n 2 96 ASN n 2 97 ASP n 2 98 GLU n 2 99 LYS n 2 100 PHE n 2 101 ASN n 2 102 LEU n 2 103 LYS n 2 104 LEU n 2 105 VAL n 2 106 ILE n 2 107 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 278 'Parasitic roundworm' ? ? ? ? ? ? ? ? 'Toxascaris leonina' 59264 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 107 human ? 'HAVCR2, TIM3, TIMD3' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0A1L1QJZ7_TOXLN A0A1L1QJZ7 ? 1 ;MATETNYPVPYRSKLTEPFEPGQTLIIKGKTAEDSVRFTINLHNTSADFSGNDVPLHISVRFDEGKIVFNTFSKGEWGKE ERKSNPYKKGDDIDIRIRAHDSKFSISVDQKEVKEYEHRVPLSSVTHFSVDGDILITYIHWGGKYYPVPYESGLAGDGLA PGKSLLIFATPEKKGKRFHINLLKKNGDIALHFNPRFDEKAIVRNSLISGEWGNEEREGKNPLEKGIGCDLEFRNEEYAF QIYVDGERFATYAHRLDPHDINGLQIGGDVEVTGIQMV ; 1 2 UNP HAVR2_HUMAN Q8TDQ0 ? 2 ;VEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGACPVFECGNVVLRTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLA DSGIYCCRIQIPGIMNDEKFNLKLVIK ; 24 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8HGJ A 1 ? 278 ? A0A1L1QJZ7 1 ? 278 ? 1 278 2 2 8HGJ B 1 ? 107 ? Q8TDQ0 24 ? 130 ? 2 108 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HGJ _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8HGJ _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0133 ? 3153 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.6582 ? 4271 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0672 ? 449 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0084 ? 561 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 9.7228 ? 1868 ? f_dihedral_angle_d ? ? # _struct.entry_id 8HGJ _struct.title 'Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HGJ _struct_keywords.text 'Tl-gal, T-cell immunoglobulin mucin-3, Tim3, complex, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id B _struct_conf.beg_label_seq_id 64 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLY _struct_conf.end_label_asym_id B _struct_conf.end_label_seq_id 68 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id B _struct_conf.beg_auth_seq_id 65 _struct_conf.end_auth_comp_id GLY _struct_conf.end_auth_asym_id B _struct_conf.end_auth_seq_id 69 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 15 SG ? ? ? 1_555 B CYS 87 SG ? ? B CYS 16 B CYS 88 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? B CYS 29 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 30 B CYS 41 1_555 ? ? ? ? ? ? ? 2.157 ? ? disulf3 disulf ? ? B CYS 35 SG ? ? ? 1_555 B CYS 86 SG ? ? B CYS 36 B CYS 87 1_555 ? ? ? ? ? ? ? 2.169 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 9 A . ? VAL 9 A PRO 10 A ? PRO 10 A 1 -6.58 2 VAL 148 A . ? VAL 148 A PRO 149 A ? PRO 149 A 1 -12.73 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 2 ? AA6 ? 2 ? AA7 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA7 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 92 ? ARG A 96 ? ASP A 92 ARG A 96 AA1 2 GLN A 23 ? LYS A 30 ? GLN A 23 LYS A 30 AA1 3 TRP A 141 ? GLY A 143 ? TRP A 141 GLY A 143 AA2 1 ILE A 40 ? LEU A 42 ? ILE A 40 LEU A 42 AA2 2 LEU A 56 ? ILE A 58 ? LEU A 56 ILE A 58 AA3 1 PHE A 104 ? VAL A 108 ? PHE A 104 VAL A 108 AA3 2 LYS A 111 ? TYR A 116 ? LYS A 111 TYR A 116 AA4 1 SER A 164 ? ILE A 167 ? SER A 164 ILE A 167 AA4 2 LEU A 231 ? ARG A 234 ? LEU A 231 ARG A 234 AA4 3 GLN A 241 ? VAL A 244 ? GLN A 241 VAL A 244 AA4 4 GLU A 247 ? THR A 251 ? GLU A 247 THR A 251 AA5 1 ASN A 194 ? ARG A 196 ? ASN A 194 ARG A 196 AA5 2 ALA A 201 ? VAL A 203 ? ALA A 201 VAL A 203 AA6 1 LEU A 207 ? ILE A 208 ? LEU A 207 ILE A 208 AA6 2 GLU A 211 ? TRP A 212 ? GLU A 211 TRP A 212 AA7 1 GLY B 83 ? ILE B 89 ? GLY B 84 ILE B 90 AA7 2 GLU B 98 ? LEU B 104 ? GLU B 99 LEU B 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ILE A 93 ? O ILE A 93 N GLY A 29 ? N GLY A 29 AA1 2 3 N THR A 24 ? N THR A 24 O GLY A 142 ? O GLY A 142 AA2 1 2 N ILE A 40 ? N ILE A 40 O ILE A 58 ? O ILE A 58 AA3 1 2 N ILE A 106 ? N ILE A 106 O LYS A 114 ? O LYS A 114 AA4 1 2 N ILE A 167 ? N ILE A 167 O LEU A 231 ? O LEU A 231 AA4 2 3 N GLU A 232 ? N GLU A 232 O TYR A 243 ? O TYR A 243 AA4 3 4 N ILE A 242 ? N ILE A 242 O ALA A 250 ? O ALA A 250 AA5 1 2 N ARG A 196 ? N ARG A 196 O ALA A 201 ? O ALA A 201 AA6 1 2 N ILE A 208 ? N ILE A 208 O GLU A 211 ? O GLU A 211 AA7 1 2 N TYR B 85 ? N TYR B 86 O LEU B 102 ? O LEU B 103 # _atom_sites.entry_id 8HGJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 HIS 57 57 57 HIS HIS A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 TRP 77 77 77 TRP TRP A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 PHE 104 104 104 PHE PHE A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 GLU 112 112 112 GLU GLU A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 HIS 118 118 118 HIS HIS A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 PRO 121 121 121 PRO PRO A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 HIS 127 127 127 HIS HIS A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 THR 137 137 137 THR THR A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 TRP 141 141 141 TRP TRP A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 TYR 145 145 145 TYR TYR A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 PRO 147 147 147 PRO PRO A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 PRO 149 149 149 PRO PRO A . n A 1 150 TYR 150 150 150 TYR TYR A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 GLY 156 156 156 GLY GLY A . n A 1 157 ASP 157 157 157 ASP ASP A . n A 1 158 GLY 158 158 158 GLY GLY A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LYS 163 163 163 LYS LYS A . n A 1 164 SER 164 164 164 SER SER A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 PHE 168 168 168 PHE PHE A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 THR 170 170 170 THR THR A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 PHE 178 178 178 PHE PHE A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ASN 181 181 181 ASN ASN A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 ASN 186 186 186 ASN ASN A . n A 1 187 GLY 187 187 187 GLY GLY A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 HIS 192 192 192 HIS HIS A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 PRO 195 195 195 PRO PRO A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 GLU 199 199 199 GLU GLU A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 ALA 201 201 201 ALA ALA A . n A 1 202 ILE 202 202 202 ILE ILE A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 ASN 205 205 205 ASN ASN A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 SER 209 209 209 SER SER A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 TRP 212 212 212 TRP TRP A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 ARG 217 217 217 ARG ARG A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 PRO 222 222 222 PRO PRO A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 ILE 227 227 227 ILE ILE A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 CYS 229 229 229 CYS CYS A . n A 1 230 ASP 230 230 230 ASP ASP A . n A 1 231 LEU 231 231 231 LEU LEU A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 PHE 233 233 233 PHE PHE A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 ASN 235 235 235 ASN ASN A . n A 1 236 GLU 236 236 236 GLU GLU A . n A 1 237 GLU 237 237 237 GLU GLU A . n A 1 238 TYR 238 238 238 TYR TYR A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 PHE 240 240 240 PHE PHE A . n A 1 241 GLN 241 241 241 GLN GLN A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 TYR 243 243 243 TYR TYR A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 ARG 248 248 248 ARG ARG A . n A 1 249 PHE 249 249 249 PHE PHE A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 TYR 252 252 252 TYR TYR A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 HIS 254 254 254 HIS HIS A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 ASP 257 257 257 ASP ASP A . n A 1 258 PRO 258 258 258 PRO PRO A . n A 1 259 HIS 259 259 259 HIS HIS A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 ASN 262 262 262 ASN ASN A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 GLN 265 265 265 GLN GLN A . n A 1 266 ILE 266 266 266 ILE ILE A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 ASP 269 269 269 ASP ASP A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 GLU 271 271 271 GLU GLU A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 GLN 276 276 276 GLN GLN A . n A 1 277 MET 277 277 277 MET MET A . n A 1 278 VAL 278 278 278 VAL VAL A . n B 2 1 VAL 1 2 2 VAL VAL B . n B 2 2 GLU 2 3 3 GLU GLU B . n B 2 3 TYR 3 4 4 TYR TYR B . n B 2 4 ARG 4 5 5 ARG ARG B . n B 2 5 ALA 5 6 6 ALA ALA B . n B 2 6 GLU 6 7 7 GLU GLU B . n B 2 7 VAL 7 8 8 VAL VAL B . n B 2 8 GLY 8 9 9 GLY GLY B . n B 2 9 GLN 9 10 10 GLN GLN B . n B 2 10 ASN 10 11 11 ASN ASN B . n B 2 11 ALA 11 12 12 ALA ALA B . n B 2 12 TYR 12 13 13 TYR TYR B . n B 2 13 LEU 13 14 14 LEU LEU B . n B 2 14 PRO 14 15 15 PRO PRO B . n B 2 15 CYS 15 16 16 CYS CYS B . n B 2 16 PHE 16 17 17 PHE PHE B . n B 2 17 TYR 17 18 18 TYR TYR B . n B 2 18 THR 18 19 19 THR THR B . n B 2 19 PRO 19 20 20 PRO PRO B . n B 2 20 ALA 20 21 21 ALA ALA B . n B 2 21 ALA 21 22 22 ALA ALA B . n B 2 22 PRO 22 23 23 PRO PRO B . n B 2 23 GLY 23 24 24 GLY GLY B . n B 2 24 ASN 24 25 25 ASN ASN B . n B 2 25 LEU 25 26 26 LEU LEU B . n B 2 26 VAL 26 27 27 VAL VAL B . n B 2 27 PRO 27 28 28 PRO PRO B . n B 2 28 VAL 28 29 29 VAL VAL B . n B 2 29 CYS 29 30 30 CYS CYS B . n B 2 30 TRP 30 31 31 TRP TRP B . n B 2 31 GLY 31 32 32 GLY GLY B . n B 2 32 LYS 32 33 33 LYS LYS B . n B 2 33 GLY 33 34 34 GLY GLY B . n B 2 34 ALA 34 35 35 ALA ALA B . n B 2 35 CYS 35 36 36 CYS CYS B . n B 2 36 PRO 36 37 37 PRO PRO B . n B 2 37 VAL 37 38 38 VAL VAL B . n B 2 38 PHE 38 39 39 PHE PHE B . n B 2 39 GLU 39 40 40 GLU GLU B . n B 2 40 CYS 40 41 41 CYS CYS B . n B 2 41 GLY 41 42 42 GLY GLY B . n B 2 42 ASN 42 43 43 ASN ASN B . n B 2 43 VAL 43 44 44 VAL VAL B . n B 2 44 VAL 44 45 45 VAL VAL B . n B 2 45 LEU 45 46 46 LEU LEU B . n B 2 46 ARG 46 47 47 ARG ARG B . n B 2 47 THR 47 48 48 THR THR B . n B 2 48 ASP 48 49 49 ASP ASP B . n B 2 49 GLU 49 50 50 GLU GLU B . n B 2 50 ARG 50 51 51 ARG ARG B . n B 2 51 ASP 51 52 52 ASP ASP B . n B 2 52 VAL 52 53 53 VAL VAL B . n B 2 53 ASN 53 54 54 ASN ASN B . n B 2 54 TYR 54 55 55 TYR TYR B . n B 2 55 TRP 55 56 56 TRP TRP B . n B 2 56 THR 56 57 57 THR THR B . n B 2 57 SER 57 58 58 SER SER B . n B 2 58 ARG 58 59 59 ARG ARG B . n B 2 59 TYR 59 60 60 TYR TYR B . n B 2 60 TRP 60 61 61 TRP TRP B . n B 2 61 LEU 61 62 62 LEU LEU B . n B 2 62 ASN 62 63 63 ASN ASN B . n B 2 63 GLY 63 64 64 GLY GLY B . n B 2 64 ASP 64 65 65 ASP ASP B . n B 2 65 PHE 65 66 66 PHE PHE B . n B 2 66 ARG 66 67 67 ARG ARG B . n B 2 67 LYS 67 68 68 LYS LYS B . n B 2 68 GLY 68 69 69 GLY GLY B . n B 2 69 ASP 69 70 70 ASP ASP B . n B 2 70 VAL 70 71 71 VAL VAL B . n B 2 71 SER 71 72 72 SER SER B . n B 2 72 LEU 72 73 73 LEU LEU B . n B 2 73 THR 73 74 74 THR THR B . n B 2 74 ILE 74 75 75 ILE ILE B . n B 2 75 GLU 75 76 76 GLU GLU B . n B 2 76 ASN 76 77 77 ASN ASN B . n B 2 77 VAL 77 78 78 VAL VAL B . n B 2 78 THR 78 79 79 THR THR B . n B 2 79 LEU 79 80 80 LEU LEU B . n B 2 80 ALA 80 81 81 ALA ALA B . n B 2 81 ASP 81 82 82 ASP ASP B . n B 2 82 SER 82 83 83 SER SER B . n B 2 83 GLY 83 84 84 GLY GLY B . n B 2 84 ILE 84 85 85 ILE ILE B . n B 2 85 TYR 85 86 86 TYR TYR B . n B 2 86 CYS 86 87 87 CYS CYS B . n B 2 87 CYS 87 88 88 CYS CYS B . n B 2 88 ARG 88 89 89 ARG ARG B . n B 2 89 ILE 89 90 90 ILE ILE B . n B 2 90 GLN 90 91 91 GLN GLN B . n B 2 91 ILE 91 92 92 ILE ILE B . n B 2 92 PRO 92 93 93 PRO PRO B . n B 2 93 GLY 93 94 94 GLY GLY B . n B 2 94 ILE 94 95 95 ILE ILE B . n B 2 95 MET 95 96 96 MET MET B . n B 2 96 ASN 96 97 97 ASN ASN B . n B 2 97 ASP 97 98 98 ASP ASP B . n B 2 98 GLU 98 99 99 GLU GLU B . n B 2 99 LYS 99 100 100 LYS LYS B . n B 2 100 PHE 100 101 101 PHE PHE B . n B 2 101 ASN 101 102 102 ASN ASN B . n B 2 102 LEU 102 103 103 LEU LEU B . n B 2 103 LYS 103 104 104 LYS LYS B . n B 2 104 LEU 104 105 105 LEU LEU B . n B 2 105 VAL 105 106 106 VAL VAL B . n B 2 106 ILE 106 107 107 ILE ILE B . n B 2 107 LYS 107 108 108 LYS LYS B . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email sbjang@pusan.ac.kr _pdbx_contact_author.name_first 'Se Bok' _pdbx_contact_author.name_last Jang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2266-0937 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? 'Paul D. Adams' pdadams@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? phenix.real_space_refine ? ? program 1.14_3260 1 ? refinement ? ? 'Paul D. Adams' pdadams@lbl.gov ? ? ? ? Python/C++ https://www.phenix-online.org/ ? PHENIX ? ? program 1.14_3260 2 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HGJ _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8HGJ _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 4.82 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 946426 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 RECOMBINANT COMPLEX 'Toxascaris leonina galectin (Tl-gal) and Human T-cell immunoglobulin mucin-3 (Tim3) complex' ? ? ? '1, 2' 2 1 RECOMBINANT COMPLEX Galectin ? ? ? 1 3 1 RECOMBINANT COMPLEX 'Hepatitis A virus cellular receptor 2' ? ? ? 2 # _em_imaging.entry_id 8HGJ _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 200 _em_imaging.illumination_mode 'SPOT SCAN' _em_imaging.mode 'DARK FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min -3000 _em_imaging.nominal_defocus_max -1800 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 70 _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R2/2' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8HGJ _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name NITROGEN _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HGJ _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CA B CYS 30 ? ? CB B CYS 30 ? ? 1.678 1.535 0.143 0.022 N 2 1 CB B CYS 30 ? ? SG B CYS 30 ? ? 2.061 1.818 0.243 0.017 N 3 1 CB B CYS 36 ? ? SG B CYS 36 ? ? 2.092 1.818 0.274 0.017 N 4 1 CB B CYS 41 ? ? SG B CYS 41 ? ? 2.159 1.818 0.341 0.017 N 5 1 CB B CYS 87 ? ? SG B CYS 87 ? ? 2.163 1.818 0.345 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA B CYS 30 ? ? CB B CYS 30 ? ? SG B CYS 30 ? ? 135.66 114.20 21.46 1.10 N 2 1 CA B CYS 36 ? ? CB B CYS 36 ? ? SG B CYS 36 ? ? 127.23 114.20 13.03 1.10 N 3 1 CA B CYS 41 ? ? CB B CYS 41 ? ? SG B CYS 41 ? ? 140.22 114.20 26.02 1.10 N 4 1 CA B CYS 87 ? ? CB B CYS 87 ? ? SG B CYS 87 ? ? 145.66 114.20 31.46 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 4 ? ? -94.71 -61.93 2 1 THR A 5 ? ? 44.08 23.68 3 1 ALA A 47 ? ? -109.71 -65.02 4 1 ASN A 52 ? ? -77.35 -166.92 5 1 ASP A 63 ? ? -128.09 -55.45 6 1 SER A 102 ? ? -141.29 -1.79 7 1 GLN A 110 ? ? 59.32 18.04 8 1 ALA A 155 ? ? -52.44 -70.13 9 1 ASP A 157 ? ? -142.38 -26.66 10 1 LYS A 163 ? ? -121.94 -168.60 11 1 GLU A 215 ? ? 56.82 73.14 12 1 GLU A 218 ? ? 59.24 70.24 13 1 ASN A 221 ? ? 33.91 66.20 14 1 PRO A 258 ? ? -73.63 -164.08 15 1 HIS A 259 ? ? 64.38 78.52 16 1 ASP A 260 ? ? 76.70 47.68 17 1 ALA B 21 ? ? -93.09 -70.63 18 1 PHE B 39 ? ? -154.33 83.81 19 1 GLU B 40 ? ? -171.24 106.00 20 1 ASP B 52 ? ? -129.25 -167.74 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 LEU A 56 ? ? HIS A 57 ? ? 146.44 2 1 ASN A 85 ? ? PRO A 86 ? ? -149.95 3 1 HIS A 179 ? ? ILE A 180 ? ? 143.68 4 1 PHE A 197 ? ? ASP A 198 ? ? 149.61 5 1 ARG A 255 ? ? LEU A 256 ? ? 149.81 6 1 PHE B 39 ? ? GLU B 40 ? ? 138.07 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.48 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue ? ? 3 2 9606 'Homo sapiens' ? ? ? ? ? ? 2 1 59264 'Toxascaris leonina' ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 1 562 'Escherichia coli' ? ? ? 3 2 562 'Escherichia coli' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 39.99 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON III (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 #