HEADER ELECTRON TRANSPORT 15-NOV-22 8HGX TITLE NMR SOLUTION STRUCTURE OF SUBUNIT EPSILON OF THE ACINETOBACTER TITLE 2 BAUMANNII F-ATP SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SYNTHASE EPSILON CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP SYNTHASE F1 SECTOR EPSILON SUBUNIT,F-ATPASE EPSILON COMPND 5 SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: ATPC, A7M90_08520, AB945B12_00682, ABA9201_12755, ABCAM1_0172, SOURCE 5 ABKPCSM17A_01727, ABR2091_0173, ABUW_3731, ACX61_17950, APC21_14385, SOURCE 6 APD31_00885, AUO97_06420, AYR68_18050, B7L45_18620, B9X95_01230, SOURCE 7 BAA1790NC_3496, BS065_18355, C2U32_15275, C6N18_19570, CBE85_14435, SOURCE 8 CBL15_17785, CSB70_3895, CTZ19_18500, D8O08_000335, DLI71_10775, SOURCE 9 DLI72_06180, DOL94_02920, DVA69_09710, E1A86_02075, E1A87_05110, SOURCE 10 E2532_15790, E2533_14640, E2534_11110, E2535_10530, E2536_13180, SOURCE 11 E2538_11270, E2539_11975, E2540_15325, E2541_09260, EA686_08570, SOURCE 12 EA706_05510, EA720_009765, EA722_10625, EGM95_19705, EKS29_01635, SOURCE 13 EWO96_15825, F2P40_12650, F4T85_15175, FDN00_02385, FE003_18665, SOURCE 14 FJU36_14065, FJU42_13255, FJU76_16610, FR761_02125, G3N53_14500, SOURCE 15 GNY86_14290, GSE42_00725, H0529_15450, H1058_00785, HB367_12610, SOURCE 16 HBK86_18985, HIN86_18905, IMO23_00750, NCTC13305_02274, SOURCE 17 NCTC13421_03737, SAMEA104305318_03328, SAMEA104305340_02247, SOURCE 18 SAMEA104305385_03000, SI89_14475; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS F-ATP SYNTHASE, SUBUNIT EOSILON, BIOENERGETICS, ACINETOBACTER, KEYWDS 2 BAUMANNII, ELECTRON TRANSPORT EXPDTA SOLUTION NMR NUMMDL 21 AUTHOR J.SHIN,G.GRUEBER REVDAT 3 12-JUN-24 8HGX 1 JRNL REVDAT 2 15-MAY-24 8HGX 1 REMARK REVDAT 1 22-NOV-23 8HGX 0 JRNL AUTH W.G.SAW,K.C.M.LE,J.SHIN,J.H.M.KWEK,C.F.WONG,P.RAGUNATHAN, JRNL AUTH 2 T.C.FONG,V.MULLER,G.GRUBER JRNL TITL ATOMIC INSIGHTS OF AN UP AND DOWN CONFORMATION OF THE JRNL TITL 2 ACINETOBACTER BAUMANNII F 1 -ATPASE SUBUNIT EPSILON AND JRNL TITL 3 DECIPHERING THE RESIDUES CRITICAL FOR ATP HYDROLYSIS JRNL TITL 4 INHIBITION AND ATP SYNTHESIS. JRNL REF FASEB J. V. 37 23040 2023 JRNL REFN ESSN 1530-6860 JRNL PMID 37318822 JRNL DOI 10.1096/FJ.202300175RR REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8HGX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1300033591. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298; 298; 298 REMARK 210 PH : 7; 7; 7 REMARK 210 IONIC STRENGTH : 100; 100; 100 REMARK 210 PRESSURE : 1 ATM; 1 ATM; 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 15N] A. BAUMANNII REMARK 210 F-ATP SYNTHASE SUBUNIT EPSILON, REMARK 210 20 MM SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 0.01 % W/V REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-100% 15N] A. BAUMANNII REMARK 210 F-ATP SYNTHASE SUBUNIT EPSILON, REMARK 210 20 MM SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 0.01 % W/V REMARK 210 SODIUM AZIDE, 90% H2O/10% D2O; REMARK 210 0.5 MM [U-100% 15N] A. BAUMANNII REMARK 210 F-ATP SYNTHASE SUBUNIT EPSILON, REMARK 210 20 MM SODIUM PHOSPHATE, 100 MM REMARK 210 SODIUM CHLORIDE, 0.01 % W/V REMARK 210 SODIUM AZIDE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HN(CO)CA; 3D 1H- REMARK 210 15N NOESY; 3D HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, NMRDRAW, REMARK 210 SPARKY, CYANA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-21 REMARK 465 RES C SSSEQI REMARK 465 MET A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 172.50 -59.82 REMARK 500 1 GLU A 13 174.46 157.71 REMARK 500 1 SER A 17 103.99 -175.33 REMARK 500 1 MET A 22 139.63 -173.10 REMARK 500 1 PRO A 36 109.78 -49.52 REMARK 500 1 ASN A 136 -74.22 -107.78 REMARK 500 1 ALA A 138 63.66 -116.23 REMARK 500 2 GLU A 13 175.69 157.65 REMARK 500 2 SER A 17 104.04 -173.13 REMARK 500 2 MET A 22 145.65 179.33 REMARK 500 2 PRO A 36 107.98 -51.61 REMARK 500 2 ASP A 90 84.57 -65.99 REMARK 500 2 ARG A 137 -43.73 -150.98 REMARK 500 3 ALA A 2 171.27 -59.72 REMARK 500 3 GLU A 13 173.67 159.19 REMARK 500 3 SER A 17 104.11 -175.24 REMARK 500 3 ALA A 138 61.34 -108.24 REMARK 500 4 GLU A 13 175.18 157.31 REMARK 500 4 SER A 17 104.12 -168.76 REMARK 500 4 MET A 22 153.33 174.82 REMARK 500 4 GLN A 108 103.22 -55.71 REMARK 500 4 ASN A 136 -44.64 -155.99 REMARK 500 4 ALA A 138 60.24 -114.77 REMARK 500 5 ALA A 2 162.08 59.79 REMARK 500 5 GLU A 13 174.55 156.04 REMARK 500 5 SER A 17 104.01 -175.18 REMARK 500 5 ALA A 138 63.47 -112.13 REMARK 500 6 GLU A 13 173.82 156.69 REMARK 500 6 ILE A 15 -67.93 -100.18 REMARK 500 6 SER A 17 104.10 -175.27 REMARK 500 6 ALA A 138 60.93 -109.90 REMARK 500 7 GLU A 13 173.54 156.04 REMARK 500 7 ILE A 15 -58.52 -121.91 REMARK 500 7 SER A 17 104.03 -175.20 REMARK 500 7 MET A 22 138.26 -171.78 REMARK 500 7 PRO A 36 107.12 -49.88 REMARK 500 7 ARG A 137 31.91 70.84 REMARK 500 7 ALA A 138 63.53 -114.79 REMARK 500 8 ALA A 2 167.96 57.53 REMARK 500 8 GLU A 13 174.19 157.82 REMARK 500 8 ILE A 15 -53.15 -121.21 REMARK 500 8 SER A 17 104.10 -175.16 REMARK 500 8 MET A 22 143.50 -174.82 REMARK 500 8 PRO A 36 108.56 -48.33 REMARK 500 8 ASP A 90 93.68 -60.61 REMARK 500 8 ALA A 138 61.91 -106.98 REMARK 500 9 GLU A 13 175.56 158.89 REMARK 500 9 SER A 17 104.01 -168.52 REMARK 500 9 ASP A 90 94.00 -68.85 REMARK 500 10 GLU A 13 175.20 155.83 REMARK 500 REMARK 500 THIS ENTRY HAS 116 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36519 RELATED DB: BMRB REMARK 900 NMR SOLUTION STRUCTURE OF SUBUNIT EPSILON OF THE ACINETOBACTER REMARK 900 BAUMANNII F-ATP SYNTHASE DBREF 8HGX A 1 139 UNP V5VHG0 V5VHG0_ACIBA 1 139 SEQADV 8HGX MET A -6 UNP V5VHG0 INITIATING METHIONINE SEQADV 8HGX HIS A -5 UNP V5VHG0 EXPRESSION TAG SEQADV 8HGX HIS A -4 UNP V5VHG0 EXPRESSION TAG SEQADV 8HGX HIS A -3 UNP V5VHG0 EXPRESSION TAG SEQADV 8HGX HIS A -2 UNP V5VHG0 EXPRESSION TAG SEQADV 8HGX HIS A -1 UNP V5VHG0 EXPRESSION TAG SEQADV 8HGX HIS A 0 UNP V5VHG0 EXPRESSION TAG SEQRES 1 A 146 MET HIS HIS HIS HIS HIS HIS MET ALA THR MET GLN CYS SEQRES 2 A 146 ASP VAL VAL SER VAL LYS GLU SER ILE TYR SER GLY ALA SEQRES 3 A 146 VAL THR MET LEU ILE ALA LYS GLY ALA GLY GLY GLU LEU SEQRES 4 A 146 GLY ILE LEU PRO GLY HIS ALA PRO LEU VAL THR LEU LEU SEQRES 5 A 146 GLN PRO GLY PRO ILE ARG VAL LEU LEU GLU ASN GLY THR SEQRES 6 A 146 GLU GLU ILE VAL TYR VAL SER GLY GLY VAL LEU GLU VAL SEQRES 7 A 146 GLN PRO HIS VAL VAL THR VAL LEU ALA ASP THR ALA ILE SEQRES 8 A 146 ARG ALA ASP ASN LEU ASP GLU ALA ALA ILE LEU GLU ALA SEQRES 9 A 146 ARG LYS ASN ALA GLU GLN LEU LEU ALA ASN GLN LYS SER SEQRES 10 A 146 ASP LEU ASP SER ALA ALA ALA LEU ALA ALA LEU ALA GLU SEQRES 11 A 146 THR ALA ALA GLN LEU GLU THR ILE ARG LYS ILE LYS ASN SEQRES 12 A 146 ARG ALA GLN HELIX 1 AA1 ASP A 90 ASN A 107 1 18 HELIX 2 AA2 SER A 110 ASN A 136 1 27 SHEET 1 AA1 5 SER A 14 VAL A 20 0 SHEET 2 AA1 5 MET A 4 SER A 10 -1 N VAL A 8 O ILE A 15 SHEET 3 AA1 5 VAL A 75 ALA A 80 1 O VAL A 76 N GLN A 5 SHEET 4 AA1 5 GLY A 67 VAL A 71 -1 N VAL A 68 O LEU A 79 SHEET 5 AA1 5 LEU A 41 LEU A 45 -1 N LEU A 41 O VAL A 71 SHEET 1 AA2 5 GLY A 30 ILE A 34 0 SHEET 2 AA2 5 MET A 22 GLY A 27 -1 N GLY A 27 O GLY A 30 SHEET 3 AA2 5 GLY A 48 LEU A 53 -1 O LEU A 53 N MET A 22 SHEET 4 AA2 5 GLU A 59 VAL A 64 -1 O VAL A 62 N ILE A 50 SHEET 5 AA2 5 ALA A 83 ARG A 85 -1 O ILE A 84 N TYR A 63 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1