data_8HHM # _entry.id 8HHM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HHM pdb_00008hhm 10.2210/pdb8hhm/pdb WWPDB D_1300033632 ? ? EMDB EMD-34804 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of the Cas12m2-crRNA-target DNA ternary complex intermediate state' _pdbx_database_related.db_id EMD-34804 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HHM _pdbx_database_status.recvd_initial_deposition_date 2022-11-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Omura, N.S.' 1 ? 'Nakagawa, R.' 2 ? 'Wu, Y.W.' 3 ? 'Sudfeld, C.' 4 ? 'Warren, V.R.' 5 ? 'Hirano, H.' 6 ? 'Kusakizako, T.' 7 ? 'Kise, Y.' 8 ? 'Lebbink, H.G.J.' 9 ? 'Itoh, Y.' 10 ? 'Oost, V.D.J.' 11 ? 'Nureki, O.' 12 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1545-9985 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 1172 _citation.page_last 1182 _citation.title 'Mechanistic and evolutionary insights into a type V-M CRISPR-Cas effector enzyme.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41594-023-01042-3 _citation.pdbx_database_id_PubMed 37460897 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Omura, S.N.' 1 ? primary 'Nakagawa, R.' 2 ? primary 'Sudfeld, C.' 3 ? primary 'Villegas Warren, R.' 4 0009-0000-4399-818X primary 'Wu, W.Y.' 5 ? primary 'Hirano, H.' 6 ? primary 'Laffeber, C.' 7 ? primary 'Kusakizako, T.' 8 0000-0002-6186-6647 primary 'Kise, Y.' 9 ? primary 'Lebbink, J.H.G.' 10 0000-0002-6240-2895 primary 'Itoh, Y.' 11 ? primary 'van der Oost, J.' 12 0000-0001-5024-1871 primary 'Nureki, O.' 13 0000-0003-1813-7008 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8HHM _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HHM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (56-MER)' 18277.932 1 ? ? ? ? 2 polymer syn 'DNA (36-MER)' 10976.068 1 ? ? ? ? 3 polymer syn 'DNA (36-MER)' 11180.160 1 ? ? ? ? 4 polymer man Cas12m2 66457.000 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn "GUANOSINE-5'-MONOPHOSPHATE" 363.221 1 ? ? ? ? 7 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GUGUCAUAGCCCAGCUUGGCGGGCGAAGGCCAAGACGGAGAUGAGGUGCGCGUGGC GUGUCAUAGCCCAGCUUGGCGGGCGAAGGCCAAGACGGAGAUGAGGUGCGCGUGGC B ? 2 polydeoxyribonucleotide no no ;(DG)(DA)(DT)(DG)(DG)(DT)(DG)(DC)(DC)(DA)(DC)(DG)(DC)(DG)(DC)(DA)(DC)(DC)(DT)(DC) (DA)(DT)(DC)(DT)(DC)(DC)(DC)(DA)(DA)(DA)(DT)(DA)(DG)(DA)(DC)(DA) ; GATGGTGCCACGCGCACCTCATCTCCCAAATAGACA C ? 3 polydeoxyribonucleotide no no ;(DT)(DG)(DT)(DC)(DT)(DA)(DT)(DT)(DT)(DG)(DG)(DG)(DA)(DG)(DA)(DT)(DG)(DA)(DG)(DG) (DT)(DG)(DC)(DG)(DC)(DG)(DT)(DG)(DG)(DC)(DA)(DC)(DC)(DA)(DT)(DC) ; TGTCTATTTGGGAGATGAGGTGCGCGTGGCACCATC D ? 4 'polypeptide(L)' no no ;GGMTTMTVHTMGVHYKWQIPEVLRQQLWLAHNLREDLVSLQLAYDDDLKAIWSSYPDVAQAEDTMAAAEADAVALSERVK QARIEARSKKISTELTQQLRDAKKRLKDARQARRDAIAVVKDDAAERRKARSDQLAADQKALYGQYCRDGDLYWASFNTV LDHHKTAVKRIAAQRASGKPATLRHHRFDGSGTIAVQLQRQAGAPPRTPMVLADEAGKYRNVLHIPGWTDPDVWEQMTRS QCRQSGRVTVRMRCGSTDGQPQWIDLPVQVHRWLPADADITGAELVVTRVAGIYRAKLCVTARIGDTEPVTSGPTVALHL GWRSTEEGTAVATWRSDAPLDIPFGLRTVMRVDAAGTSGIIVVPATIERRLTRTENIASSRSLALDALRDKVVGWLSDND APTYRDAPLEAATVKQWKSPQRFASLAHAWKDNGTEISDILWAWFSLDRKQWAQQENGRRKALGHRDDLYRQIAAVISDQ AGHVLVDDTSVAELSARAMERTELPTEVQQKIDRRRDHAAPGGLRASVVAAMTRDGVPVTIVAAADFTRTHSRCGHVNPA DDRYLSNPVRCDGCGAMYDQDRSFVTLMLRAATAPSNP ; ;GGMTTMTVHTMGVHYKWQIPEVLRQQLWLAHNLREDLVSLQLAYDDDLKAIWSSYPDVAQAEDTMAAAEADAVALSERVK QARIEARSKKISTELTQQLRDAKKRLKDARQARRDAIAVVKDDAAERRKARSDQLAADQKALYGQYCRDGDLYWASFNTV LDHHKTAVKRIAAQRASGKPATLRHHRFDGSGTIAVQLQRQAGAPPRTPMVLADEAGKYRNVLHIPGWTDPDVWEQMTRS QCRQSGRVTVRMRCGSTDGQPQWIDLPVQVHRWLPADADITGAELVVTRVAGIYRAKLCVTARIGDTEPVTSGPTVALHL GWRSTEEGTAVATWRSDAPLDIPFGLRTVMRVDAAGTSGIIVVPATIERRLTRTENIASSRSLALDALRDKVVGWLSDND APTYRDAPLEAATVKQWKSPQRFASLAHAWKDNGTEISDILWAWFSLDRKQWAQQENGRRKALGHRDDLYRQIAAVISDQ AGHVLVDDTSVAELSARAMERTELPTEVQQKIDRRRDHAAPGGLRASVVAAMTRDGVPVTIVAAADFTRTHSRCGHVNPA DDRYLSNPVRCDGCGAMYDQDRSFVTLMLRAATAPSNP ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 U n 1 3 G n 1 4 U n 1 5 C n 1 6 A n 1 7 U n 1 8 A n 1 9 G n 1 10 C n 1 11 C n 1 12 C n 1 13 A n 1 14 G n 1 15 C n 1 16 U n 1 17 U n 1 18 G n 1 19 G n 1 20 C n 1 21 G n 1 22 G n 1 23 G n 1 24 C n 1 25 G n 1 26 A n 1 27 A n 1 28 G n 1 29 G n 1 30 C n 1 31 C n 1 32 A n 1 33 A n 1 34 G n 1 35 A n 1 36 C n 1 37 G n 1 38 G n 1 39 A n 1 40 G n 1 41 A n 1 42 U n 1 43 G n 1 44 A n 1 45 G n 1 46 G n 1 47 U n 1 48 G n 1 49 C n 1 50 G n 1 51 C n 1 52 G n 1 53 U n 1 54 G n 1 55 G n 1 56 C n 2 1 DG n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DC n 2 10 DA n 2 11 DC n 2 12 DG n 2 13 DC n 2 14 DG n 2 15 DC n 2 16 DA n 2 17 DC n 2 18 DC n 2 19 DT n 2 20 DC n 2 21 DA n 2 22 DT n 2 23 DC n 2 24 DT n 2 25 DC n 2 26 DC n 2 27 DC n 2 28 DA n 2 29 DA n 2 30 DA n 2 31 DT n 2 32 DA n 2 33 DG n 2 34 DA n 2 35 DC n 2 36 DA n 3 1 DT n 3 2 DG n 3 3 DT n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DT n 3 8 DT n 3 9 DT n 3 10 DG n 3 11 DG n 3 12 DG n 3 13 DA n 3 14 DG n 3 15 DA n 3 16 DT n 3 17 DG n 3 18 DA n 3 19 DG n 3 20 DG n 3 21 DT n 3 22 DG n 3 23 DC n 3 24 DG n 3 25 DC n 3 26 DG n 3 27 DT n 3 28 DG n 3 29 DG n 3 30 DC n 3 31 DA n 3 32 DC n 3 33 DC n 3 34 DA n 3 35 DT n 3 36 DC n 4 1 GLY n 4 2 GLY n 4 3 MET n 4 4 THR n 4 5 THR n 4 6 MET n 4 7 THR n 4 8 VAL n 4 9 HIS n 4 10 THR n 4 11 MET n 4 12 GLY n 4 13 VAL n 4 14 HIS n 4 15 TYR n 4 16 LYS n 4 17 TRP n 4 18 GLN n 4 19 ILE n 4 20 PRO n 4 21 GLU n 4 22 VAL n 4 23 LEU n 4 24 ARG n 4 25 GLN n 4 26 GLN n 4 27 LEU n 4 28 TRP n 4 29 LEU n 4 30 ALA n 4 31 HIS n 4 32 ASN n 4 33 LEU n 4 34 ARG n 4 35 GLU n 4 36 ASP n 4 37 LEU n 4 38 VAL n 4 39 SER n 4 40 LEU n 4 41 GLN n 4 42 LEU n 4 43 ALA n 4 44 TYR n 4 45 ASP n 4 46 ASP n 4 47 ASP n 4 48 LEU n 4 49 LYS n 4 50 ALA n 4 51 ILE n 4 52 TRP n 4 53 SER n 4 54 SER n 4 55 TYR n 4 56 PRO n 4 57 ASP n 4 58 VAL n 4 59 ALA n 4 60 GLN n 4 61 ALA n 4 62 GLU n 4 63 ASP n 4 64 THR n 4 65 MET n 4 66 ALA n 4 67 ALA n 4 68 ALA n 4 69 GLU n 4 70 ALA n 4 71 ASP n 4 72 ALA n 4 73 VAL n 4 74 ALA n 4 75 LEU n 4 76 SER n 4 77 GLU n 4 78 ARG n 4 79 VAL n 4 80 LYS n 4 81 GLN n 4 82 ALA n 4 83 ARG n 4 84 ILE n 4 85 GLU n 4 86 ALA n 4 87 ARG n 4 88 SER n 4 89 LYS n 4 90 LYS n 4 91 ILE n 4 92 SER n 4 93 THR n 4 94 GLU n 4 95 LEU n 4 96 THR n 4 97 GLN n 4 98 GLN n 4 99 LEU n 4 100 ARG n 4 101 ASP n 4 102 ALA n 4 103 LYS n 4 104 LYS n 4 105 ARG n 4 106 LEU n 4 107 LYS n 4 108 ASP n 4 109 ALA n 4 110 ARG n 4 111 GLN n 4 112 ALA n 4 113 ARG n 4 114 ARG n 4 115 ASP n 4 116 ALA n 4 117 ILE n 4 118 ALA n 4 119 VAL n 4 120 VAL n 4 121 LYS n 4 122 ASP n 4 123 ASP n 4 124 ALA n 4 125 ALA n 4 126 GLU n 4 127 ARG n 4 128 ARG n 4 129 LYS n 4 130 ALA n 4 131 ARG n 4 132 SER n 4 133 ASP n 4 134 GLN n 4 135 LEU n 4 136 ALA n 4 137 ALA n 4 138 ASP n 4 139 GLN n 4 140 LYS n 4 141 ALA n 4 142 LEU n 4 143 TYR n 4 144 GLY n 4 145 GLN n 4 146 TYR n 4 147 CYS n 4 148 ARG n 4 149 ASP n 4 150 GLY n 4 151 ASP n 4 152 LEU n 4 153 TYR n 4 154 TRP n 4 155 ALA n 4 156 SER n 4 157 PHE n 4 158 ASN n 4 159 THR n 4 160 VAL n 4 161 LEU n 4 162 ASP n 4 163 HIS n 4 164 HIS n 4 165 LYS n 4 166 THR n 4 167 ALA n 4 168 VAL n 4 169 LYS n 4 170 ARG n 4 171 ILE n 4 172 ALA n 4 173 ALA n 4 174 GLN n 4 175 ARG n 4 176 ALA n 4 177 SER n 4 178 GLY n 4 179 LYS n 4 180 PRO n 4 181 ALA n 4 182 THR n 4 183 LEU n 4 184 ARG n 4 185 HIS n 4 186 HIS n 4 187 ARG n 4 188 PHE n 4 189 ASP n 4 190 GLY n 4 191 SER n 4 192 GLY n 4 193 THR n 4 194 ILE n 4 195 ALA n 4 196 VAL n 4 197 GLN n 4 198 LEU n 4 199 GLN n 4 200 ARG n 4 201 GLN n 4 202 ALA n 4 203 GLY n 4 204 ALA n 4 205 PRO n 4 206 PRO n 4 207 ARG n 4 208 THR n 4 209 PRO n 4 210 MET n 4 211 VAL n 4 212 LEU n 4 213 ALA n 4 214 ASP n 4 215 GLU n 4 216 ALA n 4 217 GLY n 4 218 LYS n 4 219 TYR n 4 220 ARG n 4 221 ASN n 4 222 VAL n 4 223 LEU n 4 224 HIS n 4 225 ILE n 4 226 PRO n 4 227 GLY n 4 228 TRP n 4 229 THR n 4 230 ASP n 4 231 PRO n 4 232 ASP n 4 233 VAL n 4 234 TRP n 4 235 GLU n 4 236 GLN n 4 237 MET n 4 238 THR n 4 239 ARG n 4 240 SER n 4 241 GLN n 4 242 CYS n 4 243 ARG n 4 244 GLN n 4 245 SER n 4 246 GLY n 4 247 ARG n 4 248 VAL n 4 249 THR n 4 250 VAL n 4 251 ARG n 4 252 MET n 4 253 ARG n 4 254 CYS n 4 255 GLY n 4 256 SER n 4 257 THR n 4 258 ASP n 4 259 GLY n 4 260 GLN n 4 261 PRO n 4 262 GLN n 4 263 TRP n 4 264 ILE n 4 265 ASP n 4 266 LEU n 4 267 PRO n 4 268 VAL n 4 269 GLN n 4 270 VAL n 4 271 HIS n 4 272 ARG n 4 273 TRP n 4 274 LEU n 4 275 PRO n 4 276 ALA n 4 277 ASP n 4 278 ALA n 4 279 ASP n 4 280 ILE n 4 281 THR n 4 282 GLY n 4 283 ALA n 4 284 GLU n 4 285 LEU n 4 286 VAL n 4 287 VAL n 4 288 THR n 4 289 ARG n 4 290 VAL n 4 291 ALA n 4 292 GLY n 4 293 ILE n 4 294 TYR n 4 295 ARG n 4 296 ALA n 4 297 LYS n 4 298 LEU n 4 299 CYS n 4 300 VAL n 4 301 THR n 4 302 ALA n 4 303 ARG n 4 304 ILE n 4 305 GLY n 4 306 ASP n 4 307 THR n 4 308 GLU n 4 309 PRO n 4 310 VAL n 4 311 THR n 4 312 SER n 4 313 GLY n 4 314 PRO n 4 315 THR n 4 316 VAL n 4 317 ALA n 4 318 LEU n 4 319 HIS n 4 320 LEU n 4 321 GLY n 4 322 TRP n 4 323 ARG n 4 324 SER n 4 325 THR n 4 326 GLU n 4 327 GLU n 4 328 GLY n 4 329 THR n 4 330 ALA n 4 331 VAL n 4 332 ALA n 4 333 THR n 4 334 TRP n 4 335 ARG n 4 336 SER n 4 337 ASP n 4 338 ALA n 4 339 PRO n 4 340 LEU n 4 341 ASP n 4 342 ILE n 4 343 PRO n 4 344 PHE n 4 345 GLY n 4 346 LEU n 4 347 ARG n 4 348 THR n 4 349 VAL n 4 350 MET n 4 351 ARG n 4 352 VAL n 4 353 ASP n 4 354 ALA n 4 355 ALA n 4 356 GLY n 4 357 THR n 4 358 SER n 4 359 GLY n 4 360 ILE n 4 361 ILE n 4 362 VAL n 4 363 VAL n 4 364 PRO n 4 365 ALA n 4 366 THR n 4 367 ILE n 4 368 GLU n 4 369 ARG n 4 370 ARG n 4 371 LEU n 4 372 THR n 4 373 ARG n 4 374 THR n 4 375 GLU n 4 376 ASN n 4 377 ILE n 4 378 ALA n 4 379 SER n 4 380 SER n 4 381 ARG n 4 382 SER n 4 383 LEU n 4 384 ALA n 4 385 LEU n 4 386 ASP n 4 387 ALA n 4 388 LEU n 4 389 ARG n 4 390 ASP n 4 391 LYS n 4 392 VAL n 4 393 VAL n 4 394 GLY n 4 395 TRP n 4 396 LEU n 4 397 SER n 4 398 ASP n 4 399 ASN n 4 400 ASP n 4 401 ALA n 4 402 PRO n 4 403 THR n 4 404 TYR n 4 405 ARG n 4 406 ASP n 4 407 ALA n 4 408 PRO n 4 409 LEU n 4 410 GLU n 4 411 ALA n 4 412 ALA n 4 413 THR n 4 414 VAL n 4 415 LYS n 4 416 GLN n 4 417 TRP n 4 418 LYS n 4 419 SER n 4 420 PRO n 4 421 GLN n 4 422 ARG n 4 423 PHE n 4 424 ALA n 4 425 SER n 4 426 LEU n 4 427 ALA n 4 428 HIS n 4 429 ALA n 4 430 TRP n 4 431 LYS n 4 432 ASP n 4 433 ASN n 4 434 GLY n 4 435 THR n 4 436 GLU n 4 437 ILE n 4 438 SER n 4 439 ASP n 4 440 ILE n 4 441 LEU n 4 442 TRP n 4 443 ALA n 4 444 TRP n 4 445 PHE n 4 446 SER n 4 447 LEU n 4 448 ASP n 4 449 ARG n 4 450 LYS n 4 451 GLN n 4 452 TRP n 4 453 ALA n 4 454 GLN n 4 455 GLN n 4 456 GLU n 4 457 ASN n 4 458 GLY n 4 459 ARG n 4 460 ARG n 4 461 LYS n 4 462 ALA n 4 463 LEU n 4 464 GLY n 4 465 HIS n 4 466 ARG n 4 467 ASP n 4 468 ASP n 4 469 LEU n 4 470 TYR n 4 471 ARG n 4 472 GLN n 4 473 ILE n 4 474 ALA n 4 475 ALA n 4 476 VAL n 4 477 ILE n 4 478 SER n 4 479 ASP n 4 480 GLN n 4 481 ALA n 4 482 GLY n 4 483 HIS n 4 484 VAL n 4 485 LEU n 4 486 VAL n 4 487 ASP n 4 488 ASP n 4 489 THR n 4 490 SER n 4 491 VAL n 4 492 ALA n 4 493 GLU n 4 494 LEU n 4 495 SER n 4 496 ALA n 4 497 ARG n 4 498 ALA n 4 499 MET n 4 500 GLU n 4 501 ARG n 4 502 THR n 4 503 GLU n 4 504 LEU n 4 505 PRO n 4 506 THR n 4 507 GLU n 4 508 VAL n 4 509 GLN n 4 510 GLN n 4 511 LYS n 4 512 ILE n 4 513 ASP n 4 514 ARG n 4 515 ARG n 4 516 ARG n 4 517 ASP n 4 518 HIS n 4 519 ALA n 4 520 ALA n 4 521 PRO n 4 522 GLY n 4 523 GLY n 4 524 LEU n 4 525 ARG n 4 526 ALA n 4 527 SER n 4 528 VAL n 4 529 VAL n 4 530 ALA n 4 531 ALA n 4 532 MET n 4 533 THR n 4 534 ARG n 4 535 ASP n 4 536 GLY n 4 537 VAL n 4 538 PRO n 4 539 VAL n 4 540 THR n 4 541 ILE n 4 542 VAL n 4 543 ALA n 4 544 ALA n 4 545 ALA n 4 546 ASP n 4 547 PHE n 4 548 THR n 4 549 ARG n 4 550 THR n 4 551 HIS n 4 552 SER n 4 553 ARG n 4 554 CYS n 4 555 GLY n 4 556 HIS n 4 557 VAL n 4 558 ASN n 4 559 PRO n 4 560 ALA n 4 561 ASP n 4 562 ASP n 4 563 ARG n 4 564 TYR n 4 565 LEU n 4 566 SER n 4 567 ASN n 4 568 PRO n 4 569 VAL n 4 570 ARG n 4 571 CYS n 4 572 ASP n 4 573 GLY n 4 574 CYS n 4 575 GLY n 4 576 ALA n 4 577 MET n 4 578 TYR n 4 579 ASP n 4 580 GLN n 4 581 ASP n 4 582 ARG n 4 583 SER n 4 584 PHE n 4 585 VAL n 4 586 THR n 4 587 LEU n 4 588 MET n 4 589 LEU n 4 590 ARG n 4 591 ALA n 4 592 ALA n 4 593 THR n 4 594 ALA n 4 595 PRO n 4 596 SER n 4 597 ASN n 4 598 PRO n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 56 ? ? ? ? ? ? ? ? ? 'Mycolicibacterium mucogenicum' 56689 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 'Biological sequence' 1 598 ? ? ? ? ? ? ? ? ? 'Mycolicibacterium mucogenicum' 56689 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 36 'Mycolicibacterium mucogenicum' ? 56689 ? 3 1 sample 1 36 'Mycolicibacterium mucogenicum' ? 56689 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8HHM 8HHM ? 1 ? 1 2 PDB 8HHM 8HHM ? 2 ? 1 3 PDB 8HHM 8HHM ? 3 ? 1 4 PDB 8HHM 8HHM ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8HHM B 1 ? 56 ? 8HHM -35 ? 20 ? -35 20 2 2 8HHM C 1 ? 36 ? 8HHM -8 ? 27 ? -8 27 3 3 8HHM D 1 ? 36 ? 8HHM 22 ? 57 ? 22 57 4 4 8HHM A 1 ? 598 ? 8HHM -1 ? 596 ? -1 596 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HHM _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8HHM _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 5821 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.510 ? 8234 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 17.776 ? 1364 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.036 ? 951 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 803 ? f_plane_restr ? ? # _struct.entry_id 8HHM _struct.title 'Cryo-EM structure of the Cas12m2-crRNA-target DNA ternary complex intermediate state' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HHM _struct_keywords.text 'CRISPR-Cas, RNA BINDING PROTEIN-DNA COMPLEX, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO D 20 ? SER D 53 ? PRO A 18 SER A 51 1 ? 34 HELX_P HELX_P2 AA2 ALA D 124 ? CYS D 147 ? ALA A 122 CYS A 145 1 ? 24 HELX_P HELX_P3 AA3 TYR D 153 ? GLY D 178 ? TYR A 151 GLY A 176 1 ? 26 HELX_P HELX_P4 AA4 THR D 208 ? ASP D 214 ? THR A 206 ASP A 212 1 ? 7 HELX_P HELX_P5 AA5 ASP D 230 ? MET D 237 ? ASP A 228 MET A 235 1 ? 8 HELX_P HELX_P6 AA6 THR D 238 ? GLY D 246 ? THR A 236 GLY A 244 1 ? 9 HELX_P HELX_P7 AA7 ALA D 365 ? ASN D 399 ? ALA A 363 ASN A 397 1 ? 35 HELX_P HELX_P8 AA8 GLU D 410 ? GLN D 416 ? GLU A 408 GLN A 414 1 ? 7 HELX_P HELX_P9 AA9 SER D 419 ? TRP D 430 ? SER A 417 TRP A 428 1 ? 12 HELX_P HELX_P10 AB1 THR D 435 ? ALA D 481 ? THR A 433 ALA A 479 1 ? 47 HELX_P HELX_P11 AB2 VAL D 491 ? ALA D 498 ? VAL A 489 ALA A 496 1 ? 8 HELX_P HELX_P12 AB3 GLN D 510 ? ALA D 520 ? GLN A 508 ALA A 518 1 ? 11 HELX_P HELX_P13 AB4 ALA D 520 ? ASP D 535 ? ALA A 518 ASP A 533 1 ? 16 HELX_P HELX_P14 AB5 ASP D 562 ? SER D 566 ? ASP A 560 SER A 564 5 ? 5 HELX_P HELX_P15 AB6 ASP D 581 ? THR D 593 ? ASP A 579 THR A 591 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 14 OP1 ? ? ? 1_555 E MG . MG ? ? B G -22 B MG 101 1_555 ? ? ? ? ? ? ? 2.106 ? ? metalc2 metalc ? ? A C 15 OP2 ? ? ? 1_555 E MG . MG ? ? B C -21 B MG 101 1_555 ? ? ? ? ? ? ? 2.884 ? ? metalc3 metalc ? ? D HIS 551 ND1 ? ? ? 1_555 G ZN . ZN ? ? A HIS 549 A ZN 601 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc4 metalc ? ? D CYS 554 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 552 A ZN 601 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc5 metalc ? ? D CYS 571 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 569 A ZN 601 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc6 metalc ? ? D CYS 574 N ? ? ? 1_555 G ZN . ZN ? ? A CYS 572 A ZN 601 1_555 ? ? ? ? ? ? ? 2.427 ? ? metalc7 metalc ? ? D CYS 574 SG ? ? ? 1_555 G ZN . ZN ? ? A CYS 572 A ZN 601 1_555 ? ? ? ? ? ? ? 2.362 ? ? hydrog1 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 24 N3 ? ? B G -27 B C -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 24 O2 ? ? B G -27 B C -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 24 N4 ? ? B G -27 B C -12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 23 N1 ? ? B C -26 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 23 O6 ? ? B C -26 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 23 N2 ? ? B C -26 B G -13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 22 N1 ? ? B C -25 B G -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 22 O6 ? ? B C -25 B G -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 22 N2 ? ? B C -25 B G -14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 21 N1 ? ? B C -24 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 21 O6 ? ? B C -24 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 21 N2 ? ? B C -24 B G -15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 14 N1 ? ? ? 1_555 A A 35 N1 ? ? B G -22 B A -1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A G 14 O6 ? ? ? 1_555 A A 35 N6 ? ? B G -22 B A -1 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog15 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 34 N1 ? ? B C -21 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 34 O6 ? ? B C -21 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 34 N2 ? ? B C -21 B G -2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 33 N1 ? ? B U -20 B A -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 33 N6 ? ? B U -20 B A -3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 32 N1 ? ? B U -19 B A -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 32 N6 ? ? B U -19 B A -4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 31 N3 ? ? B G -18 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 31 O2 ? ? B G -18 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 31 N4 ? ? B G -18 B C -5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 30 N3 ? ? B G -17 B C -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 30 O2 ? ? B G -17 B C -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 30 N4 ? ? B G -17 B C -6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 20 N3 ? ? ? 1_555 A G 29 N1 ? ? B C -16 B G -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 20 N4 ? ? ? 1_555 A G 29 O6 ? ? B C -16 B G -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 20 O2 ? ? ? 1_555 A G 29 N2 ? ? B C -16 B G -7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 22 N2 ? ? ? 1_555 A A 27 N3 ? ? B G -14 B A -9 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A G 37 N1 ? ? ? 1_555 B DC 26 N3 ? ? B G 1 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 37 N2 ? ? ? 1_555 B DC 26 O2 ? ? B G 1 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 37 O6 ? ? ? 1_555 B DC 26 N4 ? ? B G 1 C DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 38 N1 ? ? ? 1_555 B DC 25 N3 ? ? B G 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 38 N2 ? ? ? 1_555 B DC 25 O2 ? ? B G 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 38 O6 ? ? ? 1_555 B DC 25 N4 ? ? B G 2 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A A 39 N1 ? ? ? 1_555 B DT 24 N3 ? ? B A 3 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A A 39 N6 ? ? ? 1_555 B DT 24 O4 ? ? B A 3 C DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 40 N1 ? ? ? 1_555 B DC 23 N3 ? ? B G 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 40 N2 ? ? ? 1_555 B DC 23 O2 ? ? B G 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 40 O6 ? ? ? 1_555 B DC 23 N4 ? ? B G 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A A 41 N1 ? ? ? 1_555 B DT 22 N3 ? ? B A 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A A 41 N6 ? ? ? 1_555 B DT 22 O4 ? ? B A 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 42 N3 ? ? ? 1_555 B DA 21 N1 ? ? B U 6 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 42 O4 ? ? ? 1_555 B DA 21 N6 ? ? B U 6 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 43 N1 ? ? ? 1_555 B DC 20 N3 ? ? B G 7 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 43 N2 ? ? ? 1_555 B DC 20 O2 ? ? B G 7 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 43 O6 ? ? ? 1_555 B DC 20 N4 ? ? B G 7 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A A 44 N1 ? ? ? 1_555 B DT 19 N3 ? ? B A 8 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A A 44 N6 ? ? ? 1_555 B DT 19 O4 ? ? B A 8 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 45 N1 ? ? ? 1_555 B DC 18 N3 ? ? B G 9 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 45 N2 ? ? ? 1_555 B DC 18 O2 ? ? B G 9 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 45 O6 ? ? ? 1_555 B DC 18 N4 ? ? B G 9 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 46 N1 ? ? ? 1_555 B DC 17 N3 ? ? B G 10 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 46 N2 ? ? ? 1_555 B DC 17 O2 ? ? B G 10 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 46 O6 ? ? ? 1_555 B DC 17 N4 ? ? B G 10 C DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A U 47 N3 ? ? ? 1_555 B DA 16 N1 ? ? B U 11 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 47 O4 ? ? ? 1_555 B DA 16 N6 ? ? B U 11 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DC 27 N3 ? ? ? 1_555 C DG 10 N1 ? ? C DC 18 D DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DC 27 N4 ? ? ? 1_555 C DG 10 O6 ? ? C DC 18 D DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DC 27 O2 ? ? ? 1_555 C DG 10 N2 ? ? C DC 18 D DG 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DA 28 N1 ? ? ? 1_555 C DT 9 N3 ? ? C DA 19 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DA 28 N6 ? ? ? 1_555 C DT 9 O4 ? ? C DA 19 D DT 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DA 29 N1 ? ? ? 1_555 C DT 8 N3 ? ? C DA 20 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DA 29 N6 ? ? ? 1_555 C DT 8 O4 ? ? C DA 20 D DT 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DA 30 N1 ? ? ? 1_555 C DT 7 N3 ? ? C DA 21 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DA 30 N6 ? ? ? 1_555 C DT 7 O4 ? ? C DA 21 D DT 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DT 31 N3 ? ? ? 1_555 C DA 6 N1 ? ? C DT 22 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? B DT 31 O4 ? ? ? 1_555 C DA 6 N6 ? ? C DT 22 D DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? B DA 32 N1 ? ? ? 1_555 C DT 5 N3 ? ? C DA 23 D DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? B DA 32 N6 ? ? ? 1_555 C DT 5 O4 ? ? C DA 23 D DT 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? B DG 33 N1 ? ? ? 1_555 C DC 4 N3 ? ? C DG 24 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? B DG 33 N2 ? ? ? 1_555 C DC 4 O2 ? ? C DG 24 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? B DG 33 O6 ? ? ? 1_555 C DC 4 N4 ? ? C DG 24 D DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? B DA 34 N1 ? ? ? 1_555 C DT 3 N3 ? ? C DA 25 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? B DA 34 N6 ? ? ? 1_555 C DT 3 O4 ? ? C DA 25 D DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? B DC 35 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 26 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? B DC 35 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 26 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? B DC 35 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 26 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 567 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 565 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 568 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 566 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY D 192 ? GLN D 197 ? GLY A 190 GLN A 195 AA1 2 ILE D 280 ? VAL D 290 ? ILE A 278 VAL A 288 AA1 3 ILE D 293 ? ILE D 304 ? ILE A 291 ILE A 302 AA1 4 THR D 5 ? VAL D 13 ? THR A 3 VAL A 11 AA1 5 TRP D 263 ? GLN D 269 ? TRP A 261 GLN A 267 AA1 6 ARG D 247 ? ARG D 253 ? ARG A 245 ARG A 251 AA1 7 LEU D 223 ? HIS D 224 ? LEU A 221 HIS A 222 AA2 1 SER D 324 ? THR D 325 ? SER A 322 THR A 323 AA2 2 GLY D 328 ? SER D 336 ? GLY A 326 SER A 334 AA2 3 SER D 358 ? VAL D 363 ? SER A 356 VAL A 361 AA3 1 SER D 324 ? THR D 325 ? SER A 322 THR A 323 AA3 2 GLY D 328 ? SER D 336 ? GLY A 326 SER A 334 AA3 3 THR D 315 ? LEU D 320 ? THR A 313 LEU A 318 AA3 4 HIS D 483 ? ASP D 487 ? HIS A 481 ASP A 485 AA3 5 VAL D 539 ? VAL D 542 ? VAL A 537 VAL A 540 AA4 1 VAL D 569 ? ARG D 570 ? VAL A 567 ARG A 568 AA4 2 MET D 577 ? TYR D 578 ? MET A 575 TYR A 576 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL D 196 ? N VAL A 194 O ALA D 283 ? O ALA A 281 AA1 2 3 N THR D 288 ? N THR A 286 O ARG D 295 ? O ARG A 293 AA1 3 4 O VAL D 300 ? O VAL A 298 N HIS D 9 ? N HIS A 7 AA1 4 5 N GLY D 12 ? N GLY A 10 O GLN D 269 ? O GLN A 267 AA1 5 6 O LEU D 266 ? O LEU A 264 N VAL D 250 ? N VAL A 248 AA1 6 7 O ARG D 251 ? O ARG A 249 N HIS D 224 ? N HIS A 222 AA2 1 2 N THR D 325 ? N THR A 323 O GLY D 328 ? O GLY A 326 AA2 2 3 N VAL D 331 ? N VAL A 329 O ILE D 361 ? O ILE A 359 AA3 1 2 N THR D 325 ? N THR A 323 O GLY D 328 ? O GLY A 326 AA3 2 3 O ARG D 335 ? O ARG A 333 N ALA D 317 ? N ALA A 315 AA3 3 4 N LEU D 318 ? N LEU A 316 O LEU D 485 ? O LEU A 483 AA3 4 5 N VAL D 484 ? N VAL A 482 O THR D 540 ? O THR A 538 AA4 1 2 N VAL D 569 ? N VAL A 567 O TYR D 578 ? O TYR A 576 # _atom_sites.entry_id 8HHM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 -35 ? ? ? B . n A 1 2 U 2 -34 ? ? ? B . n A 1 3 G 3 -33 ? ? ? B . n A 1 4 U 4 -32 ? ? ? B . n A 1 5 C 5 -31 ? ? ? B . n A 1 6 A 6 -30 ? ? ? B . n A 1 7 U 7 -29 ? ? ? B . n A 1 8 A 8 -28 -28 A A B . n A 1 9 G 9 -27 -27 G G B . n A 1 10 C 10 -26 -26 C C B . n A 1 11 C 11 -25 -25 C C B . n A 1 12 C 12 -24 -24 C C B . n A 1 13 A 13 -23 -23 A A B . n A 1 14 G 14 -22 -22 G G B . n A 1 15 C 15 -21 -21 C C B . n A 1 16 U 16 -20 -20 U U B . n A 1 17 U 17 -19 -19 U U B . n A 1 18 G 18 -18 -18 G G B . n A 1 19 G 19 -17 -17 G G B . n A 1 20 C 20 -16 -16 C C B . n A 1 21 G 21 -15 -15 G G B . n A 1 22 G 22 -14 -14 G G B . n A 1 23 G 23 -13 -13 G G B . n A 1 24 C 24 -12 -12 C C B . n A 1 25 G 25 -11 -11 G G B . n A 1 26 A 26 -10 -10 A A B . n A 1 27 A 27 -9 -9 A A B . n A 1 28 G 28 -8 -8 G G B . n A 1 29 G 29 -7 -7 G G B . n A 1 30 C 30 -6 -6 C C B . n A 1 31 C 31 -5 -5 C C B . n A 1 32 A 32 -4 -4 A A B . n A 1 33 A 33 -3 -3 A A B . n A 1 34 G 34 -2 -2 G G B . n A 1 35 A 35 -1 -1 A A B . n A 1 36 C 36 0 0 C C B . n A 1 37 G 37 1 1 G G B . n A 1 38 G 38 2 2 G G B . n A 1 39 A 39 3 3 A A B . n A 1 40 G 40 4 4 G G B . n A 1 41 A 41 5 5 A A B . n A 1 42 U 42 6 6 U U B . n A 1 43 G 43 7 7 G G B . n A 1 44 A 44 8 8 A A B . n A 1 45 G 45 9 9 G G B . n A 1 46 G 46 10 10 G G B . n A 1 47 U 47 11 11 U U B . n A 1 48 G 48 12 ? ? ? B . n A 1 49 C 49 13 ? ? ? B . n A 1 50 G 50 14 ? ? ? B . n A 1 51 C 51 15 ? ? ? B . n A 1 52 G 52 16 ? ? ? B . n A 1 53 U 53 17 ? ? ? B . n A 1 54 G 54 18 ? ? ? B . n A 1 55 G 55 19 ? ? ? B . n A 1 56 C 56 20 ? ? ? B . n B 2 1 DG 1 -8 ? ? ? C . n B 2 2 DA 2 -7 ? ? ? C . n B 2 3 DT 3 -6 ? ? ? C . n B 2 4 DG 4 -5 ? ? ? C . n B 2 5 DG 5 -4 ? ? ? C . n B 2 6 DT 6 -3 ? ? ? C . n B 2 7 DG 7 -2 ? ? ? C . n B 2 8 DC 8 -1 ? ? ? C . n B 2 9 DC 9 0 ? ? ? C . n B 2 10 DA 10 1 ? ? ? C . n B 2 11 DC 11 2 ? ? ? C . n B 2 12 DG 12 3 ? ? ? C . n B 2 13 DC 13 4 ? ? ? C . n B 2 14 DG 14 5 ? ? ? C . n B 2 15 DC 15 6 6 DC DC C . n B 2 16 DA 16 7 7 DA DA C . n B 2 17 DC 17 8 8 DC DC C . n B 2 18 DC 18 9 9 DC DC C . n B 2 19 DT 19 10 10 DT DT C . n B 2 20 DC 20 11 11 DC DC C . n B 2 21 DA 21 12 12 DA DA C . n B 2 22 DT 22 13 13 DT DT C . n B 2 23 DC 23 14 14 DC DC C . n B 2 24 DT 24 15 15 DT DT C . n B 2 25 DC 25 16 16 DC DC C . n B 2 26 DC 26 17 17 DC DC C . n B 2 27 DC 27 18 18 DC DC C . n B 2 28 DA 28 19 19 DA DA C . n B 2 29 DA 29 20 20 DA DA C . n B 2 30 DA 30 21 21 DA DA C . n B 2 31 DT 31 22 22 DT DT C . n B 2 32 DA 32 23 23 DA DA C . n B 2 33 DG 33 24 24 DG DG C . n B 2 34 DA 34 25 25 DA DA C . n B 2 35 DC 35 26 26 DC DC C . n B 2 36 DA 36 27 ? ? ? C . n C 3 1 DT 1 22 ? ? ? D . n C 3 2 DG 2 23 23 DG DG D . n C 3 3 DT 3 24 24 DT DT D . n C 3 4 DC 4 25 25 DC DC D . n C 3 5 DT 5 26 26 DT DT D . n C 3 6 DA 6 27 27 DA DA D . n C 3 7 DT 7 28 28 DT DT D . n C 3 8 DT 8 29 29 DT DT D . n C 3 9 DT 9 30 30 DT DT D . n C 3 10 DG 10 31 31 DG DG D . n C 3 11 DG 11 32 32 DG DG D . n C 3 12 DG 12 33 ? ? ? D . n C 3 13 DA 13 34 ? ? ? D . n C 3 14 DG 14 35 ? ? ? D . n C 3 15 DA 15 36 ? ? ? D . n C 3 16 DT 16 37 ? ? ? D . n C 3 17 DG 17 38 ? ? ? D . n C 3 18 DA 18 39 ? ? ? D . n C 3 19 DG 19 40 ? ? ? D . n C 3 20 DG 20 41 ? ? ? D . n C 3 21 DT 21 42 ? ? ? D . n C 3 22 DG 22 43 ? ? ? D . n C 3 23 DC 23 44 ? ? ? D . n C 3 24 DG 24 45 ? ? ? D . n C 3 25 DC 25 46 ? ? ? D . n C 3 26 DG 26 47 ? ? ? D . n C 3 27 DT 27 48 ? ? ? D . n C 3 28 DG 28 49 ? ? ? D . n C 3 29 DG 29 50 ? ? ? D . n C 3 30 DC 30 51 ? ? ? D . n C 3 31 DA 31 52 ? ? ? D . n C 3 32 DC 32 53 ? ? ? D . n C 3 33 DC 33 54 ? ? ? D . n C 3 34 DA 34 55 ? ? ? D . n C 3 35 DT 35 56 ? ? ? D . n C 3 36 DC 36 57 ? ? ? D . n D 4 1 GLY 1 -1 ? ? ? A . n D 4 2 GLY 2 0 ? ? ? A . n D 4 3 MET 3 1 1 MET MET A . n D 4 4 THR 4 2 2 THR THR A . n D 4 5 THR 5 3 3 THR THR A . n D 4 6 MET 6 4 4 MET MET A . n D 4 7 THR 7 5 5 THR THR A . n D 4 8 VAL 8 6 6 VAL VAL A . n D 4 9 HIS 9 7 7 HIS HIS A . n D 4 10 THR 10 8 8 THR THR A . n D 4 11 MET 11 9 9 MET MET A . n D 4 12 GLY 12 10 10 GLY GLY A . n D 4 13 VAL 13 11 11 VAL VAL A . n D 4 14 HIS 14 12 12 HIS HIS A . n D 4 15 TYR 15 13 13 TYR TYR A . n D 4 16 LYS 16 14 14 LYS LYS A . n D 4 17 TRP 17 15 15 TRP TRP A . n D 4 18 GLN 18 16 16 GLN GLN A . n D 4 19 ILE 19 17 17 ILE ILE A . n D 4 20 PRO 20 18 18 PRO PRO A . n D 4 21 GLU 21 19 19 GLU GLU A . n D 4 22 VAL 22 20 20 VAL VAL A . n D 4 23 LEU 23 21 21 LEU LEU A . n D 4 24 ARG 24 22 22 ARG ARG A . n D 4 25 GLN 25 23 23 GLN GLN A . n D 4 26 GLN 26 24 24 GLN GLN A . n D 4 27 LEU 27 25 25 LEU LEU A . n D 4 28 TRP 28 26 26 TRP TRP A . n D 4 29 LEU 29 27 27 LEU LEU A . n D 4 30 ALA 30 28 28 ALA ALA A . n D 4 31 HIS 31 29 29 HIS HIS A . n D 4 32 ASN 32 30 30 ASN ASN A . n D 4 33 LEU 33 31 31 LEU LEU A . n D 4 34 ARG 34 32 32 ARG ARG A . n D 4 35 GLU 35 33 33 GLU GLU A . n D 4 36 ASP 36 34 34 ASP ASP A . n D 4 37 LEU 37 35 35 LEU LEU A . n D 4 38 VAL 38 36 36 VAL VAL A . n D 4 39 SER 39 37 37 SER SER A . n D 4 40 LEU 40 38 38 LEU LEU A . n D 4 41 GLN 41 39 39 GLN GLN A . n D 4 42 LEU 42 40 40 LEU LEU A . n D 4 43 ALA 43 41 41 ALA ALA A . n D 4 44 TYR 44 42 42 TYR TYR A . n D 4 45 ASP 45 43 43 ASP ASP A . n D 4 46 ASP 46 44 44 ASP ASP A . n D 4 47 ASP 47 45 45 ASP ASP A . n D 4 48 LEU 48 46 46 LEU LEU A . n D 4 49 LYS 49 47 47 LYS LYS A . n D 4 50 ALA 50 48 48 ALA ALA A . n D 4 51 ILE 51 49 49 ILE ILE A . n D 4 52 TRP 52 50 50 TRP TRP A . n D 4 53 SER 53 51 51 SER SER A . n D 4 54 SER 54 52 52 SER SER A . n D 4 55 TYR 55 53 ? ? ? A . n D 4 56 PRO 56 54 ? ? ? A . n D 4 57 ASP 57 55 ? ? ? A . n D 4 58 VAL 58 56 ? ? ? A . n D 4 59 ALA 59 57 ? ? ? A . n D 4 60 GLN 60 58 ? ? ? A . n D 4 61 ALA 61 59 ? ? ? A . n D 4 62 GLU 62 60 ? ? ? A . n D 4 63 ASP 63 61 ? ? ? A . n D 4 64 THR 64 62 ? ? ? A . n D 4 65 MET 65 63 ? ? ? A . n D 4 66 ALA 66 64 ? ? ? A . n D 4 67 ALA 67 65 ? ? ? A . n D 4 68 ALA 68 66 ? ? ? A . n D 4 69 GLU 69 67 ? ? ? A . n D 4 70 ALA 70 68 ? ? ? A . n D 4 71 ASP 71 69 ? ? ? A . n D 4 72 ALA 72 70 ? ? ? A . n D 4 73 VAL 73 71 ? ? ? A . n D 4 74 ALA 74 72 ? ? ? A . n D 4 75 LEU 75 73 ? ? ? A . n D 4 76 SER 76 74 ? ? ? A . n D 4 77 GLU 77 75 ? ? ? A . n D 4 78 ARG 78 76 ? ? ? A . n D 4 79 VAL 79 77 ? ? ? A . n D 4 80 LYS 80 78 ? ? ? A . n D 4 81 GLN 81 79 ? ? ? A . n D 4 82 ALA 82 80 ? ? ? A . n D 4 83 ARG 83 81 ? ? ? A . n D 4 84 ILE 84 82 ? ? ? A . n D 4 85 GLU 85 83 ? ? ? A . n D 4 86 ALA 86 84 ? ? ? A . n D 4 87 ARG 87 85 ? ? ? A . n D 4 88 SER 88 86 ? ? ? A . n D 4 89 LYS 89 87 ? ? ? A . n D 4 90 LYS 90 88 ? ? ? A . n D 4 91 ILE 91 89 ? ? ? A . n D 4 92 SER 92 90 ? ? ? A . n D 4 93 THR 93 91 ? ? ? A . n D 4 94 GLU 94 92 ? ? ? A . n D 4 95 LEU 95 93 ? ? ? A . n D 4 96 THR 96 94 ? ? ? A . n D 4 97 GLN 97 95 ? ? ? A . n D 4 98 GLN 98 96 ? ? ? A . n D 4 99 LEU 99 97 ? ? ? A . n D 4 100 ARG 100 98 ? ? ? A . n D 4 101 ASP 101 99 ? ? ? A . n D 4 102 ALA 102 100 ? ? ? A . n D 4 103 LYS 103 101 ? ? ? A . n D 4 104 LYS 104 102 ? ? ? A . n D 4 105 ARG 105 103 ? ? ? A . n D 4 106 LEU 106 104 ? ? ? A . n D 4 107 LYS 107 105 ? ? ? A . n D 4 108 ASP 108 106 ? ? ? A . n D 4 109 ALA 109 107 ? ? ? A . n D 4 110 ARG 110 108 ? ? ? A . n D 4 111 GLN 111 109 ? ? ? A . n D 4 112 ALA 112 110 ? ? ? A . n D 4 113 ARG 113 111 ? ? ? A . n D 4 114 ARG 114 112 ? ? ? A . n D 4 115 ASP 115 113 ? ? ? A . n D 4 116 ALA 116 114 ? ? ? A . n D 4 117 ILE 117 115 ? ? ? A . n D 4 118 ALA 118 116 ? ? ? A . n D 4 119 VAL 119 117 ? ? ? A . n D 4 120 VAL 120 118 ? ? ? A . n D 4 121 LYS 121 119 ? ? ? A . n D 4 122 ASP 122 120 ? ? ? A . n D 4 123 ASP 123 121 121 ASP ASP A . n D 4 124 ALA 124 122 122 ALA ALA A . n D 4 125 ALA 125 123 123 ALA ALA A . n D 4 126 GLU 126 124 124 GLU GLU A . n D 4 127 ARG 127 125 125 ARG ARG A . n D 4 128 ARG 128 126 126 ARG ARG A . n D 4 129 LYS 129 127 127 LYS LYS A . n D 4 130 ALA 130 128 128 ALA ALA A . n D 4 131 ARG 131 129 129 ARG ARG A . n D 4 132 SER 132 130 130 SER SER A . n D 4 133 ASP 133 131 131 ASP ASP A . n D 4 134 GLN 134 132 132 GLN GLN A . n D 4 135 LEU 135 133 133 LEU LEU A . n D 4 136 ALA 136 134 134 ALA ALA A . n D 4 137 ALA 137 135 135 ALA ALA A . n D 4 138 ASP 138 136 136 ASP ASP A . n D 4 139 GLN 139 137 137 GLN GLN A . n D 4 140 LYS 140 138 138 LYS LYS A . n D 4 141 ALA 141 139 139 ALA ALA A . n D 4 142 LEU 142 140 140 LEU LEU A . n D 4 143 TYR 143 141 141 TYR TYR A . n D 4 144 GLY 144 142 142 GLY GLY A . n D 4 145 GLN 145 143 143 GLN GLN A . n D 4 146 TYR 146 144 144 TYR TYR A . n D 4 147 CYS 147 145 145 CYS CYS A . n D 4 148 ARG 148 146 146 ARG ARG A . n D 4 149 ASP 149 147 147 ASP ASP A . n D 4 150 GLY 150 148 148 GLY GLY A . n D 4 151 ASP 151 149 149 ASP ASP A . n D 4 152 LEU 152 150 150 LEU LEU A . n D 4 153 TYR 153 151 151 TYR TYR A . n D 4 154 TRP 154 152 152 TRP TRP A . n D 4 155 ALA 155 153 153 ALA ALA A . n D 4 156 SER 156 154 154 SER SER A . n D 4 157 PHE 157 155 155 PHE PHE A . n D 4 158 ASN 158 156 156 ASN ASN A . n D 4 159 THR 159 157 157 THR THR A . n D 4 160 VAL 160 158 158 VAL VAL A . n D 4 161 LEU 161 159 159 LEU LEU A . n D 4 162 ASP 162 160 160 ASP ASP A . n D 4 163 HIS 163 161 161 HIS HIS A . n D 4 164 HIS 164 162 162 HIS HIS A . n D 4 165 LYS 165 163 163 LYS LYS A . n D 4 166 THR 166 164 164 THR THR A . n D 4 167 ALA 167 165 165 ALA ALA A . n D 4 168 VAL 168 166 166 VAL VAL A . n D 4 169 LYS 169 167 167 LYS LYS A . n D 4 170 ARG 170 168 168 ARG ARG A . n D 4 171 ILE 171 169 169 ILE ILE A . n D 4 172 ALA 172 170 170 ALA ALA A . n D 4 173 ALA 173 171 171 ALA ALA A . n D 4 174 GLN 174 172 172 GLN GLN A . n D 4 175 ARG 175 173 173 ARG ARG A . n D 4 176 ALA 176 174 174 ALA ALA A . n D 4 177 SER 177 175 175 SER SER A . n D 4 178 GLY 178 176 176 GLY GLY A . n D 4 179 LYS 179 177 177 LYS LYS A . n D 4 180 PRO 180 178 178 PRO PRO A . n D 4 181 ALA 181 179 179 ALA ALA A . n D 4 182 THR 182 180 180 THR THR A . n D 4 183 LEU 183 181 181 LEU LEU A . n D 4 184 ARG 184 182 182 ARG ARG A . n D 4 185 HIS 185 183 183 HIS HIS A . n D 4 186 HIS 186 184 184 HIS HIS A . n D 4 187 ARG 187 185 185 ARG ARG A . n D 4 188 PHE 188 186 186 PHE PHE A . n D 4 189 ASP 189 187 187 ASP ASP A . n D 4 190 GLY 190 188 188 GLY GLY A . n D 4 191 SER 191 189 189 SER SER A . n D 4 192 GLY 192 190 190 GLY GLY A . n D 4 193 THR 193 191 191 THR THR A . n D 4 194 ILE 194 192 192 ILE ILE A . n D 4 195 ALA 195 193 193 ALA ALA A . n D 4 196 VAL 196 194 194 VAL VAL A . n D 4 197 GLN 197 195 195 GLN GLN A . n D 4 198 LEU 198 196 196 LEU LEU A . n D 4 199 GLN 199 197 197 GLN GLN A . n D 4 200 ARG 200 198 198 ARG ARG A . n D 4 201 GLN 201 199 199 GLN GLN A . n D 4 202 ALA 202 200 200 ALA ALA A . n D 4 203 GLY 203 201 201 GLY GLY A . n D 4 204 ALA 204 202 202 ALA ALA A . n D 4 205 PRO 205 203 203 PRO PRO A . n D 4 206 PRO 206 204 204 PRO PRO A . n D 4 207 ARG 207 205 205 ARG ARG A . n D 4 208 THR 208 206 206 THR THR A . n D 4 209 PRO 209 207 207 PRO PRO A . n D 4 210 MET 210 208 208 MET MET A . n D 4 211 VAL 211 209 209 VAL VAL A . n D 4 212 LEU 212 210 210 LEU LEU A . n D 4 213 ALA 213 211 211 ALA ALA A . n D 4 214 ASP 214 212 212 ASP ASP A . n D 4 215 GLU 215 213 213 GLU GLU A . n D 4 216 ALA 216 214 214 ALA ALA A . n D 4 217 GLY 217 215 215 GLY GLY A . n D 4 218 LYS 218 216 216 LYS LYS A . n D 4 219 TYR 219 217 217 TYR TYR A . n D 4 220 ARG 220 218 218 ARG ARG A . n D 4 221 ASN 221 219 219 ASN ASN A . n D 4 222 VAL 222 220 220 VAL VAL A . n D 4 223 LEU 223 221 221 LEU LEU A . n D 4 224 HIS 224 222 222 HIS HIS A . n D 4 225 ILE 225 223 223 ILE ILE A . n D 4 226 PRO 226 224 224 PRO PRO A . n D 4 227 GLY 227 225 225 GLY GLY A . n D 4 228 TRP 228 226 226 TRP TRP A . n D 4 229 THR 229 227 227 THR THR A . n D 4 230 ASP 230 228 228 ASP ASP A . n D 4 231 PRO 231 229 229 PRO PRO A . n D 4 232 ASP 232 230 230 ASP ASP A . n D 4 233 VAL 233 231 231 VAL VAL A . n D 4 234 TRP 234 232 232 TRP TRP A . n D 4 235 GLU 235 233 233 GLU GLU A . n D 4 236 GLN 236 234 234 GLN GLN A . n D 4 237 MET 237 235 235 MET MET A . n D 4 238 THR 238 236 236 THR THR A . n D 4 239 ARG 239 237 237 ARG ARG A . n D 4 240 SER 240 238 238 SER SER A . n D 4 241 GLN 241 239 239 GLN GLN A . n D 4 242 CYS 242 240 240 CYS CYS A . n D 4 243 ARG 243 241 241 ARG ARG A . n D 4 244 GLN 244 242 242 GLN GLN A . n D 4 245 SER 245 243 243 SER SER A . n D 4 246 GLY 246 244 244 GLY GLY A . n D 4 247 ARG 247 245 245 ARG ARG A . n D 4 248 VAL 248 246 246 VAL VAL A . n D 4 249 THR 249 247 247 THR THR A . n D 4 250 VAL 250 248 248 VAL VAL A . n D 4 251 ARG 251 249 249 ARG ARG A . n D 4 252 MET 252 250 250 MET MET A . n D 4 253 ARG 253 251 251 ARG ARG A . n D 4 254 CYS 254 252 252 CYS CYS A . n D 4 255 GLY 255 253 253 GLY GLY A . n D 4 256 SER 256 254 254 SER SER A . n D 4 257 THR 257 255 255 THR THR A . n D 4 258 ASP 258 256 256 ASP ASP A . n D 4 259 GLY 259 257 257 GLY GLY A . n D 4 260 GLN 260 258 258 GLN GLN A . n D 4 261 PRO 261 259 259 PRO PRO A . n D 4 262 GLN 262 260 260 GLN GLN A . n D 4 263 TRP 263 261 261 TRP TRP A . n D 4 264 ILE 264 262 262 ILE ILE A . n D 4 265 ASP 265 263 263 ASP ASP A . n D 4 266 LEU 266 264 264 LEU LEU A . n D 4 267 PRO 267 265 265 PRO PRO A . n D 4 268 VAL 268 266 266 VAL VAL A . n D 4 269 GLN 269 267 267 GLN GLN A . n D 4 270 VAL 270 268 268 VAL VAL A . n D 4 271 HIS 271 269 269 HIS HIS A . n D 4 272 ARG 272 270 270 ARG ARG A . n D 4 273 TRP 273 271 271 TRP TRP A . n D 4 274 LEU 274 272 272 LEU LEU A . n D 4 275 PRO 275 273 273 PRO PRO A . n D 4 276 ALA 276 274 274 ALA ALA A . n D 4 277 ASP 277 275 275 ASP ASP A . n D 4 278 ALA 278 276 276 ALA ALA A . n D 4 279 ASP 279 277 277 ASP ASP A . n D 4 280 ILE 280 278 278 ILE ILE A . n D 4 281 THR 281 279 279 THR THR A . n D 4 282 GLY 282 280 280 GLY GLY A . n D 4 283 ALA 283 281 281 ALA ALA A . n D 4 284 GLU 284 282 282 GLU GLU A . n D 4 285 LEU 285 283 283 LEU LEU A . n D 4 286 VAL 286 284 284 VAL VAL A . n D 4 287 VAL 287 285 285 VAL VAL A . n D 4 288 THR 288 286 286 THR THR A . n D 4 289 ARG 289 287 287 ARG ARG A . n D 4 290 VAL 290 288 288 VAL VAL A . n D 4 291 ALA 291 289 289 ALA ALA A . n D 4 292 GLY 292 290 290 GLY GLY A . n D 4 293 ILE 293 291 291 ILE ILE A . n D 4 294 TYR 294 292 292 TYR TYR A . n D 4 295 ARG 295 293 293 ARG ARG A . n D 4 296 ALA 296 294 294 ALA ALA A . n D 4 297 LYS 297 295 295 LYS LYS A . n D 4 298 LEU 298 296 296 LEU LEU A . n D 4 299 CYS 299 297 297 CYS CYS A . n D 4 300 VAL 300 298 298 VAL VAL A . n D 4 301 THR 301 299 299 THR THR A . n D 4 302 ALA 302 300 300 ALA ALA A . n D 4 303 ARG 303 301 301 ARG ARG A . n D 4 304 ILE 304 302 302 ILE ILE A . n D 4 305 GLY 305 303 303 GLY GLY A . n D 4 306 ASP 306 304 304 ASP ASP A . n D 4 307 THR 307 305 305 THR THR A . n D 4 308 GLU 308 306 306 GLU GLU A . n D 4 309 PRO 309 307 307 PRO PRO A . n D 4 310 VAL 310 308 308 VAL VAL A . n D 4 311 THR 311 309 309 THR THR A . n D 4 312 SER 312 310 310 SER SER A . n D 4 313 GLY 313 311 311 GLY GLY A . n D 4 314 PRO 314 312 312 PRO PRO A . n D 4 315 THR 315 313 313 THR THR A . n D 4 316 VAL 316 314 314 VAL VAL A . n D 4 317 ALA 317 315 315 ALA ALA A . n D 4 318 LEU 318 316 316 LEU LEU A . n D 4 319 HIS 319 317 317 HIS HIS A . n D 4 320 LEU 320 318 318 LEU LEU A . n D 4 321 GLY 321 319 319 GLY GLY A . n D 4 322 TRP 322 320 320 TRP TRP A . n D 4 323 ARG 323 321 321 ARG ARG A . n D 4 324 SER 324 322 322 SER SER A . n D 4 325 THR 325 323 323 THR THR A . n D 4 326 GLU 326 324 324 GLU GLU A . n D 4 327 GLU 327 325 325 GLU GLU A . n D 4 328 GLY 328 326 326 GLY GLY A . n D 4 329 THR 329 327 327 THR THR A . n D 4 330 ALA 330 328 328 ALA ALA A . n D 4 331 VAL 331 329 329 VAL VAL A . n D 4 332 ALA 332 330 330 ALA ALA A . n D 4 333 THR 333 331 331 THR THR A . n D 4 334 TRP 334 332 332 TRP TRP A . n D 4 335 ARG 335 333 333 ARG ARG A . n D 4 336 SER 336 334 334 SER SER A . n D 4 337 ASP 337 335 335 ASP ASP A . n D 4 338 ALA 338 336 336 ALA ALA A . n D 4 339 PRO 339 337 337 PRO PRO A . n D 4 340 LEU 340 338 338 LEU LEU A . n D 4 341 ASP 341 339 339 ASP ASP A . n D 4 342 ILE 342 340 340 ILE ILE A . n D 4 343 PRO 343 341 341 PRO PRO A . n D 4 344 PHE 344 342 342 PHE PHE A . n D 4 345 GLY 345 343 343 GLY GLY A . n D 4 346 LEU 346 344 344 LEU LEU A . n D 4 347 ARG 347 345 345 ARG ARG A . n D 4 348 THR 348 346 346 THR THR A . n D 4 349 VAL 349 347 347 VAL VAL A . n D 4 350 MET 350 348 348 MET MET A . n D 4 351 ARG 351 349 349 ARG ARG A . n D 4 352 VAL 352 350 350 VAL VAL A . n D 4 353 ASP 353 351 351 ASP ASP A . n D 4 354 ALA 354 352 352 ALA ALA A . n D 4 355 ALA 355 353 353 ALA ALA A . n D 4 356 GLY 356 354 354 GLY GLY A . n D 4 357 THR 357 355 355 THR THR A . n D 4 358 SER 358 356 356 SER SER A . n D 4 359 GLY 359 357 357 GLY GLY A . n D 4 360 ILE 360 358 358 ILE ILE A . n D 4 361 ILE 361 359 359 ILE ILE A . n D 4 362 VAL 362 360 360 VAL VAL A . n D 4 363 VAL 363 361 361 VAL VAL A . n D 4 364 PRO 364 362 362 PRO PRO A . n D 4 365 ALA 365 363 363 ALA ALA A . n D 4 366 THR 366 364 364 THR THR A . n D 4 367 ILE 367 365 365 ILE ILE A . n D 4 368 GLU 368 366 366 GLU GLU A . n D 4 369 ARG 369 367 367 ARG ARG A . n D 4 370 ARG 370 368 368 ARG ARG A . n D 4 371 LEU 371 369 369 LEU LEU A . n D 4 372 THR 372 370 370 THR THR A . n D 4 373 ARG 373 371 371 ARG ARG A . n D 4 374 THR 374 372 372 THR THR A . n D 4 375 GLU 375 373 373 GLU GLU A . n D 4 376 ASN 376 374 374 ASN ASN A . n D 4 377 ILE 377 375 375 ILE ILE A . n D 4 378 ALA 378 376 376 ALA ALA A . n D 4 379 SER 379 377 377 SER SER A . n D 4 380 SER 380 378 378 SER SER A . n D 4 381 ARG 381 379 379 ARG ARG A . n D 4 382 SER 382 380 380 SER SER A . n D 4 383 LEU 383 381 381 LEU LEU A . n D 4 384 ALA 384 382 382 ALA ALA A . n D 4 385 LEU 385 383 383 LEU LEU A . n D 4 386 ASP 386 384 384 ASP ASP A . n D 4 387 ALA 387 385 385 ALA ALA A . n D 4 388 LEU 388 386 386 LEU LEU A . n D 4 389 ARG 389 387 387 ARG ARG A . n D 4 390 ASP 390 388 388 ASP ASP A . n D 4 391 LYS 391 389 389 LYS LYS A . n D 4 392 VAL 392 390 390 VAL VAL A . n D 4 393 VAL 393 391 391 VAL VAL A . n D 4 394 GLY 394 392 392 GLY GLY A . n D 4 395 TRP 395 393 393 TRP TRP A . n D 4 396 LEU 396 394 394 LEU LEU A . n D 4 397 SER 397 395 395 SER SER A . n D 4 398 ASP 398 396 396 ASP ASP A . n D 4 399 ASN 399 397 397 ASN ASN A . n D 4 400 ASP 400 398 398 ASP ASP A . n D 4 401 ALA 401 399 399 ALA ALA A . n D 4 402 PRO 402 400 400 PRO PRO A . n D 4 403 THR 403 401 401 THR THR A . n D 4 404 TYR 404 402 402 TYR TYR A . n D 4 405 ARG 405 403 403 ARG ARG A . n D 4 406 ASP 406 404 404 ASP ASP A . n D 4 407 ALA 407 405 405 ALA ALA A . n D 4 408 PRO 408 406 406 PRO PRO A . n D 4 409 LEU 409 407 407 LEU LEU A . n D 4 410 GLU 410 408 408 GLU GLU A . n D 4 411 ALA 411 409 409 ALA ALA A . n D 4 412 ALA 412 410 410 ALA ALA A . n D 4 413 THR 413 411 411 THR THR A . n D 4 414 VAL 414 412 412 VAL VAL A . n D 4 415 LYS 415 413 413 LYS LYS A . n D 4 416 GLN 416 414 414 GLN GLN A . n D 4 417 TRP 417 415 415 TRP TRP A . n D 4 418 LYS 418 416 416 LYS LYS A . n D 4 419 SER 419 417 417 SER SER A . n D 4 420 PRO 420 418 418 PRO PRO A . n D 4 421 GLN 421 419 419 GLN GLN A . n D 4 422 ARG 422 420 420 ARG ARG A . n D 4 423 PHE 423 421 421 PHE PHE A . n D 4 424 ALA 424 422 422 ALA ALA A . n D 4 425 SER 425 423 423 SER SER A . n D 4 426 LEU 426 424 424 LEU LEU A . n D 4 427 ALA 427 425 425 ALA ALA A . n D 4 428 HIS 428 426 426 HIS HIS A . n D 4 429 ALA 429 427 427 ALA ALA A . n D 4 430 TRP 430 428 428 TRP TRP A . n D 4 431 LYS 431 429 429 LYS LYS A . n D 4 432 ASP 432 430 430 ASP ASP A . n D 4 433 ASN 433 431 431 ASN ASN A . n D 4 434 GLY 434 432 432 GLY GLY A . n D 4 435 THR 435 433 433 THR THR A . n D 4 436 GLU 436 434 434 GLU GLU A . n D 4 437 ILE 437 435 435 ILE ILE A . n D 4 438 SER 438 436 436 SER SER A . n D 4 439 ASP 439 437 437 ASP ASP A . n D 4 440 ILE 440 438 438 ILE ILE A . n D 4 441 LEU 441 439 439 LEU LEU A . n D 4 442 TRP 442 440 440 TRP TRP A . n D 4 443 ALA 443 441 441 ALA ALA A . n D 4 444 TRP 444 442 442 TRP TRP A . n D 4 445 PHE 445 443 443 PHE PHE A . n D 4 446 SER 446 444 444 SER SER A . n D 4 447 LEU 447 445 445 LEU LEU A . n D 4 448 ASP 448 446 446 ASP ASP A . n D 4 449 ARG 449 447 447 ARG ARG A . n D 4 450 LYS 450 448 448 LYS LYS A . n D 4 451 GLN 451 449 449 GLN GLN A . n D 4 452 TRP 452 450 450 TRP TRP A . n D 4 453 ALA 453 451 451 ALA ALA A . n D 4 454 GLN 454 452 452 GLN GLN A . n D 4 455 GLN 455 453 453 GLN GLN A . n D 4 456 GLU 456 454 454 GLU GLU A . n D 4 457 ASN 457 455 455 ASN ASN A . n D 4 458 GLY 458 456 456 GLY GLY A . n D 4 459 ARG 459 457 457 ARG ARG A . n D 4 460 ARG 460 458 458 ARG ARG A . n D 4 461 LYS 461 459 459 LYS LYS A . n D 4 462 ALA 462 460 460 ALA ALA A . n D 4 463 LEU 463 461 461 LEU LEU A . n D 4 464 GLY 464 462 462 GLY GLY A . n D 4 465 HIS 465 463 463 HIS HIS A . n D 4 466 ARG 466 464 464 ARG ARG A . n D 4 467 ASP 467 465 465 ASP ASP A . n D 4 468 ASP 468 466 466 ASP ASP A . n D 4 469 LEU 469 467 467 LEU LEU A . n D 4 470 TYR 470 468 468 TYR TYR A . n D 4 471 ARG 471 469 469 ARG ARG A . n D 4 472 GLN 472 470 470 GLN GLN A . n D 4 473 ILE 473 471 471 ILE ILE A . n D 4 474 ALA 474 472 472 ALA ALA A . n D 4 475 ALA 475 473 473 ALA ALA A . n D 4 476 VAL 476 474 474 VAL VAL A . n D 4 477 ILE 477 475 475 ILE ILE A . n D 4 478 SER 478 476 476 SER SER A . n D 4 479 ASP 479 477 477 ASP ASP A . n D 4 480 GLN 480 478 478 GLN GLN A . n D 4 481 ALA 481 479 479 ALA ALA A . n D 4 482 GLY 482 480 480 GLY GLY A . n D 4 483 HIS 483 481 481 HIS HIS A . n D 4 484 VAL 484 482 482 VAL VAL A . n D 4 485 LEU 485 483 483 LEU LEU A . n D 4 486 VAL 486 484 484 VAL VAL A . n D 4 487 ASP 487 485 485 ASP ASP A . n D 4 488 ASP 488 486 486 ASP ASP A . n D 4 489 THR 489 487 487 THR THR A . n D 4 490 SER 490 488 488 SER SER A . n D 4 491 VAL 491 489 489 VAL VAL A . n D 4 492 ALA 492 490 490 ALA ALA A . n D 4 493 GLU 493 491 491 GLU GLU A . n D 4 494 LEU 494 492 492 LEU LEU A . n D 4 495 SER 495 493 493 SER SER A . n D 4 496 ALA 496 494 494 ALA ALA A . n D 4 497 ARG 497 495 495 ARG ARG A . n D 4 498 ALA 498 496 496 ALA ALA A . n D 4 499 MET 499 497 497 MET MET A . n D 4 500 GLU 500 498 498 GLU GLU A . n D 4 501 ARG 501 499 ? ? ? A . n D 4 502 THR 502 500 ? ? ? A . n D 4 503 GLU 503 501 ? ? ? A . n D 4 504 LEU 504 502 ? ? ? A . n D 4 505 PRO 505 503 ? ? ? A . n D 4 506 THR 506 504 ? ? ? A . n D 4 507 GLU 507 505 ? ? ? A . n D 4 508 VAL 508 506 ? ? ? A . n D 4 509 GLN 509 507 507 GLN GLN A . n D 4 510 GLN 510 508 508 GLN GLN A . n D 4 511 LYS 511 509 509 LYS LYS A . n D 4 512 ILE 512 510 510 ILE ILE A . n D 4 513 ASP 513 511 511 ASP ASP A . n D 4 514 ARG 514 512 512 ARG ARG A . n D 4 515 ARG 515 513 513 ARG ARG A . n D 4 516 ARG 516 514 514 ARG ARG A . n D 4 517 ASP 517 515 515 ASP ASP A . n D 4 518 HIS 518 516 516 HIS HIS A . n D 4 519 ALA 519 517 517 ALA ALA A . n D 4 520 ALA 520 518 518 ALA ALA A . n D 4 521 PRO 521 519 519 PRO PRO A . n D 4 522 GLY 522 520 520 GLY GLY A . n D 4 523 GLY 523 521 521 GLY GLY A . n D 4 524 LEU 524 522 522 LEU LEU A . n D 4 525 ARG 525 523 523 ARG ARG A . n D 4 526 ALA 526 524 524 ALA ALA A . n D 4 527 SER 527 525 525 SER SER A . n D 4 528 VAL 528 526 526 VAL VAL A . n D 4 529 VAL 529 527 527 VAL VAL A . n D 4 530 ALA 530 528 528 ALA ALA A . n D 4 531 ALA 531 529 529 ALA ALA A . n D 4 532 MET 532 530 530 MET MET A . n D 4 533 THR 533 531 531 THR THR A . n D 4 534 ARG 534 532 532 ARG ARG A . n D 4 535 ASP 535 533 533 ASP ASP A . n D 4 536 GLY 536 534 534 GLY GLY A . n D 4 537 VAL 537 535 535 VAL VAL A . n D 4 538 PRO 538 536 536 PRO PRO A . n D 4 539 VAL 539 537 537 VAL VAL A . n D 4 540 THR 540 538 538 THR THR A . n D 4 541 ILE 541 539 539 ILE ILE A . n D 4 542 VAL 542 540 540 VAL VAL A . n D 4 543 ALA 543 541 541 ALA ALA A . n D 4 544 ALA 544 542 542 ALA ALA A . n D 4 545 ALA 545 543 543 ALA ALA A . n D 4 546 ASP 546 544 544 ASP ASP A . n D 4 547 PHE 547 545 545 PHE PHE A . n D 4 548 THR 548 546 546 THR THR A . n D 4 549 ARG 549 547 547 ARG ARG A . n D 4 550 THR 550 548 548 THR THR A . n D 4 551 HIS 551 549 549 HIS HIS A . n D 4 552 SER 552 550 550 SER SER A . n D 4 553 ARG 553 551 551 ARG ARG A . n D 4 554 CYS 554 552 552 CYS CYS A . n D 4 555 GLY 555 553 553 GLY GLY A . n D 4 556 HIS 556 554 554 HIS HIS A . n D 4 557 VAL 557 555 555 VAL VAL A . n D 4 558 ASN 558 556 556 ASN ASN A . n D 4 559 PRO 559 557 557 PRO PRO A . n D 4 560 ALA 560 558 558 ALA ALA A . n D 4 561 ASP 561 559 559 ASP ASP A . n D 4 562 ASP 562 560 560 ASP ASP A . n D 4 563 ARG 563 561 561 ARG ARG A . n D 4 564 TYR 564 562 562 TYR TYR A . n D 4 565 LEU 565 563 563 LEU LEU A . n D 4 566 SER 566 564 564 SER SER A . n D 4 567 ASN 567 565 565 ASN ASN A . n D 4 568 PRO 568 566 566 PRO PRO A . n D 4 569 VAL 569 567 567 VAL VAL A . n D 4 570 ARG 570 568 568 ARG ARG A . n D 4 571 CYS 571 569 569 CYS CYS A . n D 4 572 ASP 572 570 570 ASP ASP A . n D 4 573 GLY 573 571 571 GLY GLY A . n D 4 574 CYS 574 572 572 CYS CYS A . n D 4 575 GLY 575 573 573 GLY GLY A . n D 4 576 ALA 576 574 574 ALA ALA A . n D 4 577 MET 577 575 575 MET MET A . n D 4 578 TYR 578 576 576 TYR TYR A . n D 4 579 ASP 579 577 577 ASP ASP A . n D 4 580 GLN 580 578 578 GLN GLN A . n D 4 581 ASP 581 579 579 ASP ASP A . n D 4 582 ARG 582 580 580 ARG ARG A . n D 4 583 SER 583 581 581 SER SER A . n D 4 584 PHE 584 582 582 PHE PHE A . n D 4 585 VAL 585 583 583 VAL VAL A . n D 4 586 THR 586 584 584 THR THR A . n D 4 587 LEU 587 585 585 LEU LEU A . n D 4 588 MET 588 586 586 MET MET A . n D 4 589 LEU 589 587 587 LEU LEU A . n D 4 590 ARG 590 588 588 ARG ARG A . n D 4 591 ALA 591 589 589 ALA ALA A . n D 4 592 ALA 592 590 590 ALA ALA A . n D 4 593 THR 593 591 591 THR THR A . n D 4 594 ALA 594 592 592 ALA ALA A . n D 4 595 PRO 595 593 ? ? ? A . n D 4 596 SER 596 594 ? ? ? A . n D 4 597 ASN 597 595 ? ? ? A . n D 4 598 PRO 598 596 ? ? ? A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 john.vanderoost@wur.nl John Oost 'van der' 'principal investigator/group leader' 0000-0001-5024-1871 3 nureki@bs.s.u-tokyo.ac.jp Osamu Nureki ? 'principal investigator/group leader' 0000-0003-1813-7008 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 101 1 MG MG B . F 6 G 1 101 12 G G C . G 7 ZN 1 601 1 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A G 14 ? B G -22 ? 1_555 MG ? E MG . ? B MG 101 ? 1_555 OP2 ? A C 15 ? B C -21 ? 1_555 74.0 ? 2 ND1 ? D HIS 551 ? A HIS 549 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 554 ? A CYS 552 ? 1_555 84.1 ? 3 ND1 ? D HIS 551 ? A HIS 549 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 571 ? A CYS 569 ? 1_555 68.8 ? 4 SG ? D CYS 554 ? A CYS 552 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 571 ? A CYS 569 ? 1_555 82.9 ? 5 ND1 ? D HIS 551 ? A HIS 549 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 N ? D CYS 574 ? A CYS 572 ? 1_555 170.2 ? 6 SG ? D CYS 554 ? A CYS 552 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 N ? D CYS 574 ? A CYS 572 ? 1_555 93.3 ? 7 SG ? D CYS 571 ? A CYS 569 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 N ? D CYS 574 ? A CYS 572 ? 1_555 101.5 ? 8 ND1 ? D HIS 551 ? A HIS 549 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 574 ? A CYS 572 ? 1_555 98.6 ? 9 SG ? D CYS 554 ? A CYS 552 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 574 ? A CYS 572 ? 1_555 164.6 ? 10 SG ? D CYS 571 ? A CYS 569 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 574 ? A CYS 572 ? 1_555 112.3 ? 11 N ? D CYS 574 ? A CYS 572 ? 1_555 ZN ? G ZN . ? A ZN 601 ? 1_555 SG ? D CYS 574 ? A CYS 572 ? 1_555 86.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-04-12 2 'Structure model' 1 1 2023-07-19 3 'Structure model' 1 2 2023-08-09 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 3 'Structure model' citation_author 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' citation 8 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.year' 7 3 'Structure model' '_citation.pdbx_database_id_PubMed' 8 3 'Structure model' '_citation.title' 9 3 'Structure model' '_citation_author.identifier_ORCID' 10 3 'Structure model' '_citation_author.name' 11 4 'Structure model' '_citation.journal_volume' 12 4 'Structure model' '_citation.page_first' 13 4 'Structure model' '_citation.page_last' 14 4 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_entry_details.entry_id 8HHM _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HHM _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8HHM _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.08 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 180921 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.6 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Cas12m2-crRNA-target DNA' ? ? ? 1,2,3,4 2 1 'MULTIPLE SOURCES' COMPLEX 'crRNA-target DNA' ? ? ? 1,2,3 3 1 RECOMBINANT COMPLEX Cas12m2 ? ? ? 4 4 2 RECOMBINANT COMPLEX crRNA ? ? ? 1 5 2 SYNTHETIC COMPLEX 'target DNA' ? ? ? 2,3 # _em_imaging.entry_id 8HHM _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8HHM _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HHM _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 14 ? ? -94.46 58.76 2 1 ARG A 205 ? ? -90.73 57.30 3 1 THR A 309 ? ? -130.27 -30.36 4 1 TRP A 320 ? ? -142.97 20.89 5 1 HIS A 481 ? ? -165.69 118.69 # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag N _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id C _pdbx_unobs_or_zero_occ_atoms.auth_comp_id G _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 101 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OP3 _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id F _pdbx_unobs_or_zero_occ_atoms.label_comp_id G _pdbx_unobs_or_zero_occ_atoms.label_seq_id 1 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OP3 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B G -35 ? A G 1 2 1 Y 1 B U -34 ? A U 2 3 1 Y 1 B G -33 ? A G 3 4 1 Y 1 B U -32 ? A U 4 5 1 Y 1 B C -31 ? A C 5 6 1 Y 1 B A -30 ? A A 6 7 1 Y 1 B U -29 ? A U 7 8 1 Y 1 B G 12 ? A G 48 9 1 Y 1 B C 13 ? A C 49 10 1 Y 1 B G 14 ? A G 50 11 1 Y 1 B C 15 ? A C 51 12 1 Y 1 B G 16 ? A G 52 13 1 Y 1 B U 17 ? A U 53 14 1 Y 1 B G 18 ? A G 54 15 1 Y 1 B G 19 ? A G 55 16 1 Y 1 B C 20 ? A C 56 17 1 Y 1 C DG -8 ? B DG 1 18 1 Y 1 C DA -7 ? B DA 2 19 1 Y 1 C DT -6 ? B DT 3 20 1 Y 1 C DG -5 ? B DG 4 21 1 Y 1 C DG -4 ? B DG 5 22 1 Y 1 C DT -3 ? B DT 6 23 1 Y 1 C DG -2 ? B DG 7 24 1 Y 1 C DC -1 ? B DC 8 25 1 Y 1 C DC 0 ? B DC 9 26 1 Y 1 C DA 1 ? B DA 10 27 1 Y 1 C DC 2 ? B DC 11 28 1 Y 1 C DG 3 ? B DG 12 29 1 Y 1 C DC 4 ? B DC 13 30 1 Y 1 C DG 5 ? B DG 14 31 1 Y 1 C DA 27 ? B DA 36 32 1 Y 1 D DT 22 ? C DT 1 33 1 Y 1 D DG 33 ? C DG 12 34 1 Y 1 D DA 34 ? C DA 13 35 1 Y 1 D DG 35 ? C DG 14 36 1 Y 1 D DA 36 ? C DA 15 37 1 Y 1 D DT 37 ? C DT 16 38 1 Y 1 D DG 38 ? C DG 17 39 1 Y 1 D DA 39 ? C DA 18 40 1 Y 1 D DG 40 ? C DG 19 41 1 Y 1 D DG 41 ? C DG 20 42 1 Y 1 D DT 42 ? C DT 21 43 1 Y 1 D DG 43 ? C DG 22 44 1 Y 1 D DC 44 ? C DC 23 45 1 Y 1 D DG 45 ? C DG 24 46 1 Y 1 D DC 46 ? C DC 25 47 1 Y 1 D DG 47 ? C DG 26 48 1 Y 1 D DT 48 ? C DT 27 49 1 Y 1 D DG 49 ? C DG 28 50 1 Y 1 D DG 50 ? C DG 29 51 1 Y 1 D DC 51 ? C DC 30 52 1 Y 1 D DA 52 ? C DA 31 53 1 Y 1 D DC 53 ? C DC 32 54 1 Y 1 D DC 54 ? C DC 33 55 1 Y 1 D DA 55 ? C DA 34 56 1 Y 1 D DT 56 ? C DT 35 57 1 Y 1 D DC 57 ? C DC 36 58 1 Y 1 A GLY -1 ? D GLY 1 59 1 Y 1 A GLY 0 ? D GLY 2 60 1 Y 1 A TYR 53 ? D TYR 55 61 1 Y 1 A PRO 54 ? D PRO 56 62 1 Y 1 A ASP 55 ? D ASP 57 63 1 Y 1 A VAL 56 ? D VAL 58 64 1 Y 1 A ALA 57 ? D ALA 59 65 1 Y 1 A GLN 58 ? D GLN 60 66 1 Y 1 A ALA 59 ? D ALA 61 67 1 Y 1 A GLU 60 ? D GLU 62 68 1 Y 1 A ASP 61 ? D ASP 63 69 1 Y 1 A THR 62 ? D THR 64 70 1 Y 1 A MET 63 ? D MET 65 71 1 Y 1 A ALA 64 ? D ALA 66 72 1 Y 1 A ALA 65 ? D ALA 67 73 1 Y 1 A ALA 66 ? D ALA 68 74 1 Y 1 A GLU 67 ? D GLU 69 75 1 Y 1 A ALA 68 ? D ALA 70 76 1 Y 1 A ASP 69 ? D ASP 71 77 1 Y 1 A ALA 70 ? D ALA 72 78 1 Y 1 A VAL 71 ? D VAL 73 79 1 Y 1 A ALA 72 ? D ALA 74 80 1 Y 1 A LEU 73 ? D LEU 75 81 1 Y 1 A SER 74 ? D SER 76 82 1 Y 1 A GLU 75 ? D GLU 77 83 1 Y 1 A ARG 76 ? D ARG 78 84 1 Y 1 A VAL 77 ? D VAL 79 85 1 Y 1 A LYS 78 ? D LYS 80 86 1 Y 1 A GLN 79 ? D GLN 81 87 1 Y 1 A ALA 80 ? D ALA 82 88 1 Y 1 A ARG 81 ? D ARG 83 89 1 Y 1 A ILE 82 ? D ILE 84 90 1 Y 1 A GLU 83 ? D GLU 85 91 1 Y 1 A ALA 84 ? D ALA 86 92 1 Y 1 A ARG 85 ? D ARG 87 93 1 Y 1 A SER 86 ? D SER 88 94 1 Y 1 A LYS 87 ? D LYS 89 95 1 Y 1 A LYS 88 ? D LYS 90 96 1 Y 1 A ILE 89 ? D ILE 91 97 1 Y 1 A SER 90 ? D SER 92 98 1 Y 1 A THR 91 ? D THR 93 99 1 Y 1 A GLU 92 ? D GLU 94 100 1 Y 1 A LEU 93 ? D LEU 95 101 1 Y 1 A THR 94 ? D THR 96 102 1 Y 1 A GLN 95 ? D GLN 97 103 1 Y 1 A GLN 96 ? D GLN 98 104 1 Y 1 A LEU 97 ? D LEU 99 105 1 Y 1 A ARG 98 ? D ARG 100 106 1 Y 1 A ASP 99 ? D ASP 101 107 1 Y 1 A ALA 100 ? D ALA 102 108 1 Y 1 A LYS 101 ? D LYS 103 109 1 Y 1 A LYS 102 ? D LYS 104 110 1 Y 1 A ARG 103 ? D ARG 105 111 1 Y 1 A LEU 104 ? D LEU 106 112 1 Y 1 A LYS 105 ? D LYS 107 113 1 Y 1 A ASP 106 ? D ASP 108 114 1 Y 1 A ALA 107 ? D ALA 109 115 1 Y 1 A ARG 108 ? D ARG 110 116 1 Y 1 A GLN 109 ? D GLN 111 117 1 Y 1 A ALA 110 ? D ALA 112 118 1 Y 1 A ARG 111 ? D ARG 113 119 1 Y 1 A ARG 112 ? D ARG 114 120 1 Y 1 A ASP 113 ? D ASP 115 121 1 Y 1 A ALA 114 ? D ALA 116 122 1 Y 1 A ILE 115 ? D ILE 117 123 1 Y 1 A ALA 116 ? D ALA 118 124 1 Y 1 A VAL 117 ? D VAL 119 125 1 Y 1 A VAL 118 ? D VAL 120 126 1 Y 1 A LYS 119 ? D LYS 121 127 1 Y 1 A ASP 120 ? D ASP 122 128 1 Y 1 A ARG 499 ? D ARG 501 129 1 Y 1 A THR 500 ? D THR 502 130 1 Y 1 A GLU 501 ? D GLU 503 131 1 Y 1 A LEU 502 ? D LEU 504 132 1 Y 1 A PRO 503 ? D PRO 505 133 1 Y 1 A THR 504 ? D THR 506 134 1 Y 1 A GLU 505 ? D GLU 507 135 1 Y 1 A VAL 506 ? D VAL 508 136 1 Y 1 A PRO 593 ? D PRO 595 137 1 Y 1 A SER 594 ? D SER 596 138 1 Y 1 A ASN 595 ? D ASN 597 139 1 Y 1 A PRO 596 ? D PRO 598 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 DA OP3 O N N 160 DA P P N N 161 DA OP1 O N N 162 DA OP2 O N N 163 DA "O5'" O N N 164 DA "C5'" C N N 165 DA "C4'" C N R 166 DA "O4'" O N N 167 DA "C3'" C N S 168 DA "O3'" O N N 169 DA "C2'" C N N 170 DA "C1'" C N R 171 DA N9 N Y N 172 DA C8 C Y N 173 DA N7 N Y N 174 DA C5 C Y N 175 DA C6 C Y N 176 DA N6 N N N 177 DA N1 N Y N 178 DA C2 C Y N 179 DA N3 N Y N 180 DA C4 C Y N 181 DA HOP3 H N N 182 DA HOP2 H N N 183 DA "H5'" H N N 184 DA "H5''" H N N 185 DA "H4'" H N N 186 DA "H3'" H N N 187 DA "HO3'" H N N 188 DA "H2'" H N N 189 DA "H2''" H N N 190 DA "H1'" H N N 191 DA H8 H N N 192 DA H61 H N N 193 DA H62 H N N 194 DA H2 H N N 195 DC OP3 O N N 196 DC P P N N 197 DC OP1 O N N 198 DC OP2 O N N 199 DC "O5'" O N N 200 DC "C5'" C N N 201 DC "C4'" C N R 202 DC "O4'" O N N 203 DC "C3'" C N S 204 DC "O3'" O N N 205 DC "C2'" C N N 206 DC "C1'" C N R 207 DC N1 N N N 208 DC C2 C N N 209 DC O2 O N N 210 DC N3 N N N 211 DC C4 C N N 212 DC N4 N N N 213 DC C5 C N N 214 DC C6 C N N 215 DC HOP3 H N N 216 DC HOP2 H N N 217 DC "H5'" H N N 218 DC "H5''" H N N 219 DC "H4'" H N N 220 DC "H3'" H N N 221 DC "HO3'" H N N 222 DC "H2'" H N N 223 DC "H2''" H N N 224 DC "H1'" H N N 225 DC H41 H N N 226 DC H42 H N N 227 DC H5 H N N 228 DC H6 H N N 229 DG OP3 O N N 230 DG P P N N 231 DG OP1 O N N 232 DG OP2 O N N 233 DG "O5'" O N N 234 DG "C5'" C N N 235 DG "C4'" C N R 236 DG "O4'" O N N 237 DG "C3'" C N S 238 DG "O3'" O N N 239 DG "C2'" C N N 240 DG "C1'" C N R 241 DG N9 N Y N 242 DG C8 C Y N 243 DG N7 N Y N 244 DG C5 C Y N 245 DG C6 C N N 246 DG O6 O N N 247 DG N1 N N N 248 DG C2 C N N 249 DG N2 N N N 250 DG N3 N N N 251 DG C4 C Y N 252 DG HOP3 H N N 253 DG HOP2 H N N 254 DG "H5'" H N N 255 DG "H5''" H N N 256 DG "H4'" H N N 257 DG "H3'" H N N 258 DG "HO3'" H N N 259 DG "H2'" H N N 260 DG "H2''" H N N 261 DG "H1'" H N N 262 DG H8 H N N 263 DG H1 H N N 264 DG H21 H N N 265 DG H22 H N N 266 DT OP3 O N N 267 DT P P N N 268 DT OP1 O N N 269 DT OP2 O N N 270 DT "O5'" O N N 271 DT "C5'" C N N 272 DT "C4'" C N R 273 DT "O4'" O N N 274 DT "C3'" C N S 275 DT "O3'" O N N 276 DT "C2'" C N N 277 DT "C1'" C N R 278 DT N1 N N N 279 DT C2 C N N 280 DT O2 O N N 281 DT N3 N N N 282 DT C4 C N N 283 DT O4 O N N 284 DT C5 C N N 285 DT C7 C N N 286 DT C6 C N N 287 DT HOP3 H N N 288 DT HOP2 H N N 289 DT "H5'" H N N 290 DT "H5''" H N N 291 DT "H4'" H N N 292 DT "H3'" H N N 293 DT "HO3'" H N N 294 DT "H2'" H N N 295 DT "H2''" H N N 296 DT "H1'" H N N 297 DT H3 H N N 298 DT H71 H N N 299 DT H72 H N N 300 DT H73 H N N 301 DT H6 H N N 302 G OP3 O N N 303 G P P N N 304 G OP1 O N N 305 G OP2 O N N 306 G "O5'" O N N 307 G "C5'" C N N 308 G "C4'" C N R 309 G "O4'" O N N 310 G "C3'" C N S 311 G "O3'" O N N 312 G "C2'" C N R 313 G "O2'" O N N 314 G "C1'" C N R 315 G N9 N Y N 316 G C8 C Y N 317 G N7 N Y N 318 G C5 C Y N 319 G C6 C N N 320 G O6 O N N 321 G N1 N N N 322 G C2 C N N 323 G N2 N N N 324 G N3 N N N 325 G C4 C Y N 326 G HOP3 H N N 327 G HOP2 H N N 328 G "H5'" H N N 329 G "H5''" H N N 330 G "H4'" H N N 331 G "H3'" H N N 332 G "HO3'" H N N 333 G "H2'" H N N 334 G "HO2'" H N N 335 G "H1'" H N N 336 G H8 H N N 337 G H1 H N N 338 G H21 H N N 339 G H22 H N N 340 GLN N N N N 341 GLN CA C N S 342 GLN C C N N 343 GLN O O N N 344 GLN CB C N N 345 GLN CG C N N 346 GLN CD C N N 347 GLN OE1 O N N 348 GLN NE2 N N N 349 GLN OXT O N N 350 GLN H H N N 351 GLN H2 H N N 352 GLN HA H N N 353 GLN HB2 H N N 354 GLN HB3 H N N 355 GLN HG2 H N N 356 GLN HG3 H N N 357 GLN HE21 H N N 358 GLN HE22 H N N 359 GLN HXT H N N 360 GLU N N N N 361 GLU CA C N S 362 GLU C C N N 363 GLU O O N N 364 GLU CB C N N 365 GLU CG C N N 366 GLU CD C N N 367 GLU OE1 O N N 368 GLU OE2 O N N 369 GLU OXT O N N 370 GLU H H N N 371 GLU H2 H N N 372 GLU HA H N N 373 GLU HB2 H N N 374 GLU HB3 H N N 375 GLU HG2 H N N 376 GLU HG3 H N N 377 GLU HE2 H N N 378 GLU HXT H N N 379 GLY N N N N 380 GLY CA C N N 381 GLY C C N N 382 GLY O O N N 383 GLY OXT O N N 384 GLY H H N N 385 GLY H2 H N N 386 GLY HA2 H N N 387 GLY HA3 H N N 388 GLY HXT H N N 389 HIS N N N N 390 HIS CA C N S 391 HIS C C N N 392 HIS O O N N 393 HIS CB C N N 394 HIS CG C Y N 395 HIS ND1 N Y N 396 HIS CD2 C Y N 397 HIS CE1 C Y N 398 HIS NE2 N Y N 399 HIS OXT O N N 400 HIS H H N N 401 HIS H2 H N N 402 HIS HA H N N 403 HIS HB2 H N N 404 HIS HB3 H N N 405 HIS HD1 H N N 406 HIS HD2 H N N 407 HIS HE1 H N N 408 HIS HE2 H N N 409 HIS HXT H N N 410 ILE N N N N 411 ILE CA C N S 412 ILE C C N N 413 ILE O O N N 414 ILE CB C N S 415 ILE CG1 C N N 416 ILE CG2 C N N 417 ILE CD1 C N N 418 ILE OXT O N N 419 ILE H H N N 420 ILE H2 H N N 421 ILE HA H N N 422 ILE HB H N N 423 ILE HG12 H N N 424 ILE HG13 H N N 425 ILE HG21 H N N 426 ILE HG22 H N N 427 ILE HG23 H N N 428 ILE HD11 H N N 429 ILE HD12 H N N 430 ILE HD13 H N N 431 ILE HXT H N N 432 LEU N N N N 433 LEU CA C N S 434 LEU C C N N 435 LEU O O N N 436 LEU CB C N N 437 LEU CG C N N 438 LEU CD1 C N N 439 LEU CD2 C N N 440 LEU OXT O N N 441 LEU H H N N 442 LEU H2 H N N 443 LEU HA H N N 444 LEU HB2 H N N 445 LEU HB3 H N N 446 LEU HG H N N 447 LEU HD11 H N N 448 LEU HD12 H N N 449 LEU HD13 H N N 450 LEU HD21 H N N 451 LEU HD22 H N N 452 LEU HD23 H N N 453 LEU HXT H N N 454 LYS N N N N 455 LYS CA C N S 456 LYS C C N N 457 LYS O O N N 458 LYS CB C N N 459 LYS CG C N N 460 LYS CD C N N 461 LYS CE C N N 462 LYS NZ N N N 463 LYS OXT O N N 464 LYS H H N N 465 LYS H2 H N N 466 LYS HA H N N 467 LYS HB2 H N N 468 LYS HB3 H N N 469 LYS HG2 H N N 470 LYS HG3 H N N 471 LYS HD2 H N N 472 LYS HD3 H N N 473 LYS HE2 H N N 474 LYS HE3 H N N 475 LYS HZ1 H N N 476 LYS HZ2 H N N 477 LYS HZ3 H N N 478 LYS HXT H N N 479 MET N N N N 480 MET CA C N S 481 MET C C N N 482 MET O O N N 483 MET CB C N N 484 MET CG C N N 485 MET SD S N N 486 MET CE C N N 487 MET OXT O N N 488 MET H H N N 489 MET H2 H N N 490 MET HA H N N 491 MET HB2 H N N 492 MET HB3 H N N 493 MET HG2 H N N 494 MET HG3 H N N 495 MET HE1 H N N 496 MET HE2 H N N 497 MET HE3 H N N 498 MET HXT H N N 499 MG MG MG N N 500 PHE N N N N 501 PHE CA C N S 502 PHE C C N N 503 PHE O O N N 504 PHE CB C N N 505 PHE CG C Y N 506 PHE CD1 C Y N 507 PHE CD2 C Y N 508 PHE CE1 C Y N 509 PHE CE2 C Y N 510 PHE CZ C Y N 511 PHE OXT O N N 512 PHE H H N N 513 PHE H2 H N N 514 PHE HA H N N 515 PHE HB2 H N N 516 PHE HB3 H N N 517 PHE HD1 H N N 518 PHE HD2 H N N 519 PHE HE1 H N N 520 PHE HE2 H N N 521 PHE HZ H N N 522 PHE HXT H N N 523 PRO N N N N 524 PRO CA C N S 525 PRO C C N N 526 PRO O O N N 527 PRO CB C N N 528 PRO CG C N N 529 PRO CD C N N 530 PRO OXT O N N 531 PRO H H N N 532 PRO HA H N N 533 PRO HB2 H N N 534 PRO HB3 H N N 535 PRO HG2 H N N 536 PRO HG3 H N N 537 PRO HD2 H N N 538 PRO HD3 H N N 539 PRO HXT H N N 540 SER N N N N 541 SER CA C N S 542 SER C C N N 543 SER O O N N 544 SER CB C N N 545 SER OG O N N 546 SER OXT O N N 547 SER H H N N 548 SER H2 H N N 549 SER HA H N N 550 SER HB2 H N N 551 SER HB3 H N N 552 SER HG H N N 553 SER HXT H N N 554 THR N N N N 555 THR CA C N S 556 THR C C N N 557 THR O O N N 558 THR CB C N R 559 THR OG1 O N N 560 THR CG2 C N N 561 THR OXT O N N 562 THR H H N N 563 THR H2 H N N 564 THR HA H N N 565 THR HB H N N 566 THR HG1 H N N 567 THR HG21 H N N 568 THR HG22 H N N 569 THR HG23 H N N 570 THR HXT H N N 571 TRP N N N N 572 TRP CA C N S 573 TRP C C N N 574 TRP O O N N 575 TRP CB C N N 576 TRP CG C Y N 577 TRP CD1 C Y N 578 TRP CD2 C Y N 579 TRP NE1 N Y N 580 TRP CE2 C Y N 581 TRP CE3 C Y N 582 TRP CZ2 C Y N 583 TRP CZ3 C Y N 584 TRP CH2 C Y N 585 TRP OXT O N N 586 TRP H H N N 587 TRP H2 H N N 588 TRP HA H N N 589 TRP HB2 H N N 590 TRP HB3 H N N 591 TRP HD1 H N N 592 TRP HE1 H N N 593 TRP HE3 H N N 594 TRP HZ2 H N N 595 TRP HZ3 H N N 596 TRP HH2 H N N 597 TRP HXT H N N 598 TYR N N N N 599 TYR CA C N S 600 TYR C C N N 601 TYR O O N N 602 TYR CB C N N 603 TYR CG C Y N 604 TYR CD1 C Y N 605 TYR CD2 C Y N 606 TYR CE1 C Y N 607 TYR CE2 C Y N 608 TYR CZ C Y N 609 TYR OH O N N 610 TYR OXT O N N 611 TYR H H N N 612 TYR H2 H N N 613 TYR HA H N N 614 TYR HB2 H N N 615 TYR HB3 H N N 616 TYR HD1 H N N 617 TYR HD2 H N N 618 TYR HE1 H N N 619 TYR HE2 H N N 620 TYR HH H N N 621 TYR HXT H N N 622 U OP3 O N N 623 U P P N N 624 U OP1 O N N 625 U OP2 O N N 626 U "O5'" O N N 627 U "C5'" C N N 628 U "C4'" C N R 629 U "O4'" O N N 630 U "C3'" C N S 631 U "O3'" O N N 632 U "C2'" C N R 633 U "O2'" O N N 634 U "C1'" C N R 635 U N1 N N N 636 U C2 C N N 637 U O2 O N N 638 U N3 N N N 639 U C4 C N N 640 U O4 O N N 641 U C5 C N N 642 U C6 C N N 643 U HOP3 H N N 644 U HOP2 H N N 645 U "H5'" H N N 646 U "H5''" H N N 647 U "H4'" H N N 648 U "H3'" H N N 649 U "HO3'" H N N 650 U "H2'" H N N 651 U "HO2'" H N N 652 U "H1'" H N N 653 U H3 H N N 654 U H5 H N N 655 U H6 H N N 656 VAL N N N N 657 VAL CA C N S 658 VAL C C N N 659 VAL O O N N 660 VAL CB C N N 661 VAL CG1 C N N 662 VAL CG2 C N N 663 VAL OXT O N N 664 VAL H H N N 665 VAL H2 H N N 666 VAL HA H N N 667 VAL HB H N N 668 VAL HG11 H N N 669 VAL HG12 H N N 670 VAL HG13 H N N 671 VAL HG21 H N N 672 VAL HG22 H N N 673 VAL HG23 H N N 674 VAL HXT H N N 675 ZN ZN ZN N N 676 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 DA OP3 P sing N N 158 DA OP3 HOP3 sing N N 159 DA P OP1 doub N N 160 DA P OP2 sing N N 161 DA P "O5'" sing N N 162 DA OP2 HOP2 sing N N 163 DA "O5'" "C5'" sing N N 164 DA "C5'" "C4'" sing N N 165 DA "C5'" "H5'" sing N N 166 DA "C5'" "H5''" sing N N 167 DA "C4'" "O4'" sing N N 168 DA "C4'" "C3'" sing N N 169 DA "C4'" "H4'" sing N N 170 DA "O4'" "C1'" sing N N 171 DA "C3'" "O3'" sing N N 172 DA "C3'" "C2'" sing N N 173 DA "C3'" "H3'" sing N N 174 DA "O3'" "HO3'" sing N N 175 DA "C2'" "C1'" sing N N 176 DA "C2'" "H2'" sing N N 177 DA "C2'" "H2''" sing N N 178 DA "C1'" N9 sing N N 179 DA "C1'" "H1'" sing N N 180 DA N9 C8 sing Y N 181 DA N9 C4 sing Y N 182 DA C8 N7 doub Y N 183 DA C8 H8 sing N N 184 DA N7 C5 sing Y N 185 DA C5 C6 sing Y N 186 DA C5 C4 doub Y N 187 DA C6 N6 sing N N 188 DA C6 N1 doub Y N 189 DA N6 H61 sing N N 190 DA N6 H62 sing N N 191 DA N1 C2 sing Y N 192 DA C2 N3 doub Y N 193 DA C2 H2 sing N N 194 DA N3 C4 sing Y N 195 DC OP3 P sing N N 196 DC OP3 HOP3 sing N N 197 DC P OP1 doub N N 198 DC P OP2 sing N N 199 DC P "O5'" sing N N 200 DC OP2 HOP2 sing N N 201 DC "O5'" "C5'" sing N N 202 DC "C5'" "C4'" sing N N 203 DC "C5'" "H5'" sing N N 204 DC "C5'" "H5''" sing N N 205 DC "C4'" "O4'" sing N N 206 DC "C4'" "C3'" sing N N 207 DC "C4'" "H4'" sing N N 208 DC "O4'" "C1'" sing N N 209 DC "C3'" "O3'" sing N N 210 DC "C3'" "C2'" sing N N 211 DC "C3'" "H3'" sing N N 212 DC "O3'" "HO3'" sing N N 213 DC "C2'" "C1'" sing N N 214 DC "C2'" "H2'" sing N N 215 DC "C2'" "H2''" sing N N 216 DC "C1'" N1 sing N N 217 DC "C1'" "H1'" sing N N 218 DC N1 C2 sing N N 219 DC N1 C6 sing N N 220 DC C2 O2 doub N N 221 DC C2 N3 sing N N 222 DC N3 C4 doub N N 223 DC C4 N4 sing N N 224 DC C4 C5 sing N N 225 DC N4 H41 sing N N 226 DC N4 H42 sing N N 227 DC C5 C6 doub N N 228 DC C5 H5 sing N N 229 DC C6 H6 sing N N 230 DG OP3 P sing N N 231 DG OP3 HOP3 sing N N 232 DG P OP1 doub N N 233 DG P OP2 sing N N 234 DG P "O5'" sing N N 235 DG OP2 HOP2 sing N N 236 DG "O5'" "C5'" sing N N 237 DG "C5'" "C4'" sing N N 238 DG "C5'" "H5'" sing N N 239 DG "C5'" "H5''" sing N N 240 DG "C4'" "O4'" sing N N 241 DG "C4'" "C3'" sing N N 242 DG "C4'" "H4'" sing N N 243 DG "O4'" "C1'" sing N N 244 DG "C3'" "O3'" sing N N 245 DG "C3'" "C2'" sing N N 246 DG "C3'" "H3'" sing N N 247 DG "O3'" "HO3'" sing N N 248 DG "C2'" "C1'" sing N N 249 DG "C2'" "H2'" sing N N 250 DG "C2'" "H2''" sing N N 251 DG "C1'" N9 sing N N 252 DG "C1'" "H1'" sing N N 253 DG N9 C8 sing Y N 254 DG N9 C4 sing Y N 255 DG C8 N7 doub Y N 256 DG C8 H8 sing N N 257 DG N7 C5 sing Y N 258 DG C5 C6 sing N N 259 DG C5 C4 doub Y N 260 DG C6 O6 doub N N 261 DG C6 N1 sing N N 262 DG N1 C2 sing N N 263 DG N1 H1 sing N N 264 DG C2 N2 sing N N 265 DG C2 N3 doub N N 266 DG N2 H21 sing N N 267 DG N2 H22 sing N N 268 DG N3 C4 sing N N 269 DT OP3 P sing N N 270 DT OP3 HOP3 sing N N 271 DT P OP1 doub N N 272 DT P OP2 sing N N 273 DT P "O5'" sing N N 274 DT OP2 HOP2 sing N N 275 DT "O5'" "C5'" sing N N 276 DT "C5'" "C4'" sing N N 277 DT "C5'" "H5'" sing N N 278 DT "C5'" "H5''" sing N N 279 DT "C4'" "O4'" sing N N 280 DT "C4'" "C3'" sing N N 281 DT "C4'" "H4'" sing N N 282 DT "O4'" "C1'" sing N N 283 DT "C3'" "O3'" sing N N 284 DT "C3'" "C2'" sing N N 285 DT "C3'" "H3'" sing N N 286 DT "O3'" "HO3'" sing N N 287 DT "C2'" "C1'" sing N N 288 DT "C2'" "H2'" sing N N 289 DT "C2'" "H2''" sing N N 290 DT "C1'" N1 sing N N 291 DT "C1'" "H1'" sing N N 292 DT N1 C2 sing N N 293 DT N1 C6 sing N N 294 DT C2 O2 doub N N 295 DT C2 N3 sing N N 296 DT N3 C4 sing N N 297 DT N3 H3 sing N N 298 DT C4 O4 doub N N 299 DT C4 C5 sing N N 300 DT C5 C7 sing N N 301 DT C5 C6 doub N N 302 DT C7 H71 sing N N 303 DT C7 H72 sing N N 304 DT C7 H73 sing N N 305 DT C6 H6 sing N N 306 G OP3 P sing N N 307 G OP3 HOP3 sing N N 308 G P OP1 doub N N 309 G P OP2 sing N N 310 G P "O5'" sing N N 311 G OP2 HOP2 sing N N 312 G "O5'" "C5'" sing N N 313 G "C5'" "C4'" sing N N 314 G "C5'" "H5'" sing N N 315 G "C5'" "H5''" sing N N 316 G "C4'" "O4'" sing N N 317 G "C4'" "C3'" sing N N 318 G "C4'" "H4'" sing N N 319 G "O4'" "C1'" sing N N 320 G "C3'" "O3'" sing N N 321 G "C3'" "C2'" sing N N 322 G "C3'" "H3'" sing N N 323 G "O3'" "HO3'" sing N N 324 G "C2'" "O2'" sing N N 325 G "C2'" "C1'" sing N N 326 G "C2'" "H2'" sing N N 327 G "O2'" "HO2'" sing N N 328 G "C1'" N9 sing N N 329 G "C1'" "H1'" sing N N 330 G N9 C8 sing Y N 331 G N9 C4 sing Y N 332 G C8 N7 doub Y N 333 G C8 H8 sing N N 334 G N7 C5 sing Y N 335 G C5 C6 sing N N 336 G C5 C4 doub Y N 337 G C6 O6 doub N N 338 G C6 N1 sing N N 339 G N1 C2 sing N N 340 G N1 H1 sing N N 341 G C2 N2 sing N N 342 G C2 N3 doub N N 343 G N2 H21 sing N N 344 G N2 H22 sing N N 345 G N3 C4 sing N N 346 GLN N CA sing N N 347 GLN N H sing N N 348 GLN N H2 sing N N 349 GLN CA C sing N N 350 GLN CA CB sing N N 351 GLN CA HA sing N N 352 GLN C O doub N N 353 GLN C OXT sing N N 354 GLN CB CG sing N N 355 GLN CB HB2 sing N N 356 GLN CB HB3 sing N N 357 GLN CG CD sing N N 358 GLN CG HG2 sing N N 359 GLN CG HG3 sing N N 360 GLN CD OE1 doub N N 361 GLN CD NE2 sing N N 362 GLN NE2 HE21 sing N N 363 GLN NE2 HE22 sing N N 364 GLN OXT HXT sing N N 365 GLU N CA sing N N 366 GLU N H sing N N 367 GLU N H2 sing N N 368 GLU CA C sing N N 369 GLU CA CB sing N N 370 GLU CA HA sing N N 371 GLU C O doub N N 372 GLU C OXT sing N N 373 GLU CB CG sing N N 374 GLU CB HB2 sing N N 375 GLU CB HB3 sing N N 376 GLU CG CD sing N N 377 GLU CG HG2 sing N N 378 GLU CG HG3 sing N N 379 GLU CD OE1 doub N N 380 GLU CD OE2 sing N N 381 GLU OE2 HE2 sing N N 382 GLU OXT HXT sing N N 383 GLY N CA sing N N 384 GLY N H sing N N 385 GLY N H2 sing N N 386 GLY CA C sing N N 387 GLY CA HA2 sing N N 388 GLY CA HA3 sing N N 389 GLY C O doub N N 390 GLY C OXT sing N N 391 GLY OXT HXT sing N N 392 HIS N CA sing N N 393 HIS N H sing N N 394 HIS N H2 sing N N 395 HIS CA C sing N N 396 HIS CA CB sing N N 397 HIS CA HA sing N N 398 HIS C O doub N N 399 HIS C OXT sing N N 400 HIS CB CG sing N N 401 HIS CB HB2 sing N N 402 HIS CB HB3 sing N N 403 HIS CG ND1 sing Y N 404 HIS CG CD2 doub Y N 405 HIS ND1 CE1 doub Y N 406 HIS ND1 HD1 sing N N 407 HIS CD2 NE2 sing Y N 408 HIS CD2 HD2 sing N N 409 HIS CE1 NE2 sing Y N 410 HIS CE1 HE1 sing N N 411 HIS NE2 HE2 sing N N 412 HIS OXT HXT sing N N 413 ILE N CA sing N N 414 ILE N H sing N N 415 ILE N H2 sing N N 416 ILE CA C sing N N 417 ILE CA CB sing N N 418 ILE CA HA sing N N 419 ILE C O doub N N 420 ILE C OXT sing N N 421 ILE CB CG1 sing N N 422 ILE CB CG2 sing N N 423 ILE CB HB sing N N 424 ILE CG1 CD1 sing N N 425 ILE CG1 HG12 sing N N 426 ILE CG1 HG13 sing N N 427 ILE CG2 HG21 sing N N 428 ILE CG2 HG22 sing N N 429 ILE CG2 HG23 sing N N 430 ILE CD1 HD11 sing N N 431 ILE CD1 HD12 sing N N 432 ILE CD1 HD13 sing N N 433 ILE OXT HXT sing N N 434 LEU N CA sing N N 435 LEU N H sing N N 436 LEU N H2 sing N N 437 LEU CA C sing N N 438 LEU CA CB sing N N 439 LEU CA HA sing N N 440 LEU C O doub N N 441 LEU C OXT sing N N 442 LEU CB CG sing N N 443 LEU CB HB2 sing N N 444 LEU CB HB3 sing N N 445 LEU CG CD1 sing N N 446 LEU CG CD2 sing N N 447 LEU CG HG sing N N 448 LEU CD1 HD11 sing N N 449 LEU CD1 HD12 sing N N 450 LEU CD1 HD13 sing N N 451 LEU CD2 HD21 sing N N 452 LEU CD2 HD22 sing N N 453 LEU CD2 HD23 sing N N 454 LEU OXT HXT sing N N 455 LYS N CA sing N N 456 LYS N H sing N N 457 LYS N H2 sing N N 458 LYS CA C sing N N 459 LYS CA CB sing N N 460 LYS CA HA sing N N 461 LYS C O doub N N 462 LYS C OXT sing N N 463 LYS CB CG sing N N 464 LYS CB HB2 sing N N 465 LYS CB HB3 sing N N 466 LYS CG CD sing N N 467 LYS CG HG2 sing N N 468 LYS CG HG3 sing N N 469 LYS CD CE sing N N 470 LYS CD HD2 sing N N 471 LYS CD HD3 sing N N 472 LYS CE NZ sing N N 473 LYS CE HE2 sing N N 474 LYS CE HE3 sing N N 475 LYS NZ HZ1 sing N N 476 LYS NZ HZ2 sing N N 477 LYS NZ HZ3 sing N N 478 LYS OXT HXT sing N N 479 MET N CA sing N N 480 MET N H sing N N 481 MET N H2 sing N N 482 MET CA C sing N N 483 MET CA CB sing N N 484 MET CA HA sing N N 485 MET C O doub N N 486 MET C OXT sing N N 487 MET CB CG sing N N 488 MET CB HB2 sing N N 489 MET CB HB3 sing N N 490 MET CG SD sing N N 491 MET CG HG2 sing N N 492 MET CG HG3 sing N N 493 MET SD CE sing N N 494 MET CE HE1 sing N N 495 MET CE HE2 sing N N 496 MET CE HE3 sing N N 497 MET OXT HXT sing N N 498 PHE N CA sing N N 499 PHE N H sing N N 500 PHE N H2 sing N N 501 PHE CA C sing N N 502 PHE CA CB sing N N 503 PHE CA HA sing N N 504 PHE C O doub N N 505 PHE C OXT sing N N 506 PHE CB CG sing N N 507 PHE CB HB2 sing N N 508 PHE CB HB3 sing N N 509 PHE CG CD1 doub Y N 510 PHE CG CD2 sing Y N 511 PHE CD1 CE1 sing Y N 512 PHE CD1 HD1 sing N N 513 PHE CD2 CE2 doub Y N 514 PHE CD2 HD2 sing N N 515 PHE CE1 CZ doub Y N 516 PHE CE1 HE1 sing N N 517 PHE CE2 CZ sing Y N 518 PHE CE2 HE2 sing N N 519 PHE CZ HZ sing N N 520 PHE OXT HXT sing N N 521 PRO N CA sing N N 522 PRO N CD sing N N 523 PRO N H sing N N 524 PRO CA C sing N N 525 PRO CA CB sing N N 526 PRO CA HA sing N N 527 PRO C O doub N N 528 PRO C OXT sing N N 529 PRO CB CG sing N N 530 PRO CB HB2 sing N N 531 PRO CB HB3 sing N N 532 PRO CG CD sing N N 533 PRO CG HG2 sing N N 534 PRO CG HG3 sing N N 535 PRO CD HD2 sing N N 536 PRO CD HD3 sing N N 537 PRO OXT HXT sing N N 538 SER N CA sing N N 539 SER N H sing N N 540 SER N H2 sing N N 541 SER CA C sing N N 542 SER CA CB sing N N 543 SER CA HA sing N N 544 SER C O doub N N 545 SER C OXT sing N N 546 SER CB OG sing N N 547 SER CB HB2 sing N N 548 SER CB HB3 sing N N 549 SER OG HG sing N N 550 SER OXT HXT sing N N 551 THR N CA sing N N 552 THR N H sing N N 553 THR N H2 sing N N 554 THR CA C sing N N 555 THR CA CB sing N N 556 THR CA HA sing N N 557 THR C O doub N N 558 THR C OXT sing N N 559 THR CB OG1 sing N N 560 THR CB CG2 sing N N 561 THR CB HB sing N N 562 THR OG1 HG1 sing N N 563 THR CG2 HG21 sing N N 564 THR CG2 HG22 sing N N 565 THR CG2 HG23 sing N N 566 THR OXT HXT sing N N 567 TRP N CA sing N N 568 TRP N H sing N N 569 TRP N H2 sing N N 570 TRP CA C sing N N 571 TRP CA CB sing N N 572 TRP CA HA sing N N 573 TRP C O doub N N 574 TRP C OXT sing N N 575 TRP CB CG sing N N 576 TRP CB HB2 sing N N 577 TRP CB HB3 sing N N 578 TRP CG CD1 doub Y N 579 TRP CG CD2 sing Y N 580 TRP CD1 NE1 sing Y N 581 TRP CD1 HD1 sing N N 582 TRP CD2 CE2 doub Y N 583 TRP CD2 CE3 sing Y N 584 TRP NE1 CE2 sing Y N 585 TRP NE1 HE1 sing N N 586 TRP CE2 CZ2 sing Y N 587 TRP CE3 CZ3 doub Y N 588 TRP CE3 HE3 sing N N 589 TRP CZ2 CH2 doub Y N 590 TRP CZ2 HZ2 sing N N 591 TRP CZ3 CH2 sing Y N 592 TRP CZ3 HZ3 sing N N 593 TRP CH2 HH2 sing N N 594 TRP OXT HXT sing N N 595 TYR N CA sing N N 596 TYR N H sing N N 597 TYR N H2 sing N N 598 TYR CA C sing N N 599 TYR CA CB sing N N 600 TYR CA HA sing N N 601 TYR C O doub N N 602 TYR C OXT sing N N 603 TYR CB CG sing N N 604 TYR CB HB2 sing N N 605 TYR CB HB3 sing N N 606 TYR CG CD1 doub Y N 607 TYR CG CD2 sing Y N 608 TYR CD1 CE1 sing Y N 609 TYR CD1 HD1 sing N N 610 TYR CD2 CE2 doub Y N 611 TYR CD2 HD2 sing N N 612 TYR CE1 CZ doub Y N 613 TYR CE1 HE1 sing N N 614 TYR CE2 CZ sing Y N 615 TYR CE2 HE2 sing N N 616 TYR CZ OH sing N N 617 TYR OH HH sing N N 618 TYR OXT HXT sing N N 619 U OP3 P sing N N 620 U OP3 HOP3 sing N N 621 U P OP1 doub N N 622 U P OP2 sing N N 623 U P "O5'" sing N N 624 U OP2 HOP2 sing N N 625 U "O5'" "C5'" sing N N 626 U "C5'" "C4'" sing N N 627 U "C5'" "H5'" sing N N 628 U "C5'" "H5''" sing N N 629 U "C4'" "O4'" sing N N 630 U "C4'" "C3'" sing N N 631 U "C4'" "H4'" sing N N 632 U "O4'" "C1'" sing N N 633 U "C3'" "O3'" sing N N 634 U "C3'" "C2'" sing N N 635 U "C3'" "H3'" sing N N 636 U "O3'" "HO3'" sing N N 637 U "C2'" "O2'" sing N N 638 U "C2'" "C1'" sing N N 639 U "C2'" "H2'" sing N N 640 U "O2'" "HO2'" sing N N 641 U "C1'" N1 sing N N 642 U "C1'" "H1'" sing N N 643 U N1 C2 sing N N 644 U N1 C6 sing N N 645 U C2 O2 doub N N 646 U C2 N3 sing N N 647 U N3 C4 sing N N 648 U N3 H3 sing N N 649 U C4 O4 doub N N 650 U C4 C5 sing N N 651 U C5 C6 doub N N 652 U C5 H5 sing N N 653 U C6 H6 sing N N 654 VAL N CA sing N N 655 VAL N H sing N N 656 VAL N H2 sing N N 657 VAL CA C sing N N 658 VAL CA CB sing N N 659 VAL CA HA sing N N 660 VAL C O doub N N 661 VAL C OXT sing N N 662 VAL CB CG1 sing N N 663 VAL CB CG2 sing N N 664 VAL CB HB sing N N 665 VAL CG1 HG11 sing N N 666 VAL CG1 HG12 sing N N 667 VAL CG1 HG13 sing N N 668 VAL CG2 HG21 sing N N 669 VAL CG2 HG22 sing N N 670 VAL CG2 HG23 sing N N 671 VAL OXT HXT sing N N 672 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 56689 _em_entity_assembly_naturalsource.organism 'Mycolicibacterium mucogenicum' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 3 2 562 'Escherichia coli' ? ? ? 4 3 562 'Escherichia coli' ? ? # _em_entity_assembly_synthetic.cell ? _em_entity_assembly_synthetic.cellular_location ? _em_entity_assembly_synthetic.entity_assembly_id 5 _em_entity_assembly_synthetic.id 1 _em_entity_assembly_synthetic.ncbi_tax_id 32630 _em_entity_assembly_synthetic.organ ? _em_entity_assembly_synthetic.organelle ? _em_entity_assembly_synthetic.organism 'synthetic construct' _em_entity_assembly_synthetic.strain ? _em_entity_assembly_synthetic.tissue ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 55 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8HHM 'double helix' 8HHM 'a-form double helix' 8HHM 'b-form double helix' 8HHM 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 9 1_555 A C 24 1_555 -0.222 -0.126 -0.208 -7.828 -2.537 -2.094 1 B_G-27:C-12_B B -27 ? B -12 ? 19 1 1 A C 10 1_555 A G 23 1_555 0.170 -0.169 -0.281 4.830 -0.921 -0.132 2 B_C-26:G-13_B B -26 ? B -13 ? 19 1 1 A C 11 1_555 A G 22 1_555 0.209 -0.114 0.012 4.727 -5.630 1.846 3 B_C-25:G-14_B B -25 ? B -14 ? 19 1 1 A C 12 1_555 A G 21 1_555 0.129 -0.135 -0.392 10.879 4.046 0.690 4 B_C-24:G-15_B B -24 ? B -15 ? 19 1 1 A G 29 1_555 A C 20 1_555 -0.187 -0.111 -0.465 -5.513 0.037 1.306 5 B_G-7:C-16_B B -7 ? B -16 ? 19 1 1 A C 30 1_555 A G 19 1_555 0.101 -0.142 -0.274 -1.717 3.606 1.225 6 B_C-6:G-17_B B -6 ? B -17 ? 19 1 1 A C 31 1_555 A G 18 1_555 0.146 -0.108 0.334 -4.285 -8.400 0.647 7 B_C-5:G-18_B B -5 ? B -18 ? 19 1 1 A A 32 1_555 A U 17 1_555 0.115 -0.130 0.667 -0.551 -1.816 1.831 8 B_A-4:U-19_B B -4 ? B -19 ? 20 1 1 A A 33 1_555 A U 16 1_555 0.047 -0.160 0.535 -1.333 -1.823 -1.545 9 B_A-3:U-20_B B -3 ? B -20 ? 20 1 1 A G 34 1_555 A C 15 1_555 -0.158 -0.134 0.297 3.452 -6.213 -0.837 10 B_G-2:C-21_B B -2 ? B -21 ? 19 1 1 A A 35 1_555 A G 14 1_555 0.663 1.274 -0.803 0.563 -12.372 -14.317 11 B_A-1:G-22_B B -1 ? B -22 ? 8 1 1 A G 37 1_555 B DC 26 1_555 -0.122 -0.223 -1.121 -13.595 2.233 0.386 12 B_G1:DC17_C B 1 ? C 17 ? 19 1 1 A G 38 1_555 B DC 25 1_555 -0.218 -0.229 -1.114 -16.427 -7.144 0.768 13 B_G2:DC16_C B 2 ? C 16 ? 19 1 1 A A 39 1_555 B DT 24 1_555 0.313 -0.420 -1.524 -12.419 -3.784 -5.341 14 B_A3:DT15_C B 3 ? C 15 ? 20 1 1 A G 40 1_555 B DC 23 1_555 -0.148 -0.147 -0.588 -4.551 2.395 -0.261 15 B_G4:DC14_C B 4 ? C 14 ? 19 1 1 A A 41 1_555 B DT 22 1_555 0.129 -0.144 0.153 1.098 1.326 -0.242 16 B_A5:DT13_C B 5 ? C 13 ? 20 1 1 A U 42 1_555 B DA 21 1_555 0.003 -0.167 0.656 4.257 -1.305 -0.692 17 B_U6:DA12_C B 6 ? C 12 ? 20 1 1 A G 43 1_555 B DC 20 1_555 -0.212 -0.206 0.680 2.927 5.048 1.277 18 B_G7:DC11_C B 7 ? C 11 ? 19 1 1 A A 44 1_555 B DT 19 1_555 0.203 -0.187 0.561 7.155 -1.444 -3.776 19 B_A8:DT10_C B 8 ? C 10 ? 20 1 1 A G 45 1_555 B DC 18 1_555 -0.188 -0.181 -0.380 -4.040 -2.539 0.254 20 B_G9:DC9_C B 9 ? C 9 ? 19 1 1 A G 46 1_555 B DC 17 1_555 -0.181 -0.254 -0.700 -1.158 -0.430 -1.338 21 B_G10:DC8_C B 10 ? C 8 ? 19 1 1 A U 47 1_555 B DA 16 1_555 0.008 -0.261 -0.660 -0.074 -3.390 4.868 22 B_U11:DA7_C B 11 ? C 7 ? 20 1 1 B DC 27 1_555 C DG 10 1_555 0.178 -0.165 0.543 0.393 -1.008 1.298 23 C_DC18:DG31_D C 18 ? D 31 ? 19 1 1 B DA 28 1_555 C DT 9 1_555 0.103 -0.151 0.061 1.931 -1.939 5.820 24 C_DA19:DT30_D C 19 ? D 30 ? 20 1 1 B DA 29 1_555 C DT 8 1_555 0.011 -0.168 -0.452 -5.846 -8.715 -2.891 25 C_DA20:DT29_D C 20 ? D 29 ? 20 1 1 B DA 30 1_555 C DT 7 1_555 0.196 -0.121 -0.837 -10.327 -8.155 -2.085 26 C_DA21:DT28_D C 21 ? D 28 ? 20 1 1 B DT 31 1_555 C DA 6 1_555 -0.500 0.342 -0.442 -11.367 -7.632 10.323 27 C_DT22:DA27_D C 22 ? D 27 ? 20 1 1 B DA 32 1_555 C DT 5 1_555 0.089 -0.208 -0.927 -8.525 -1.376 3.055 28 C_DA23:DT26_D C 23 ? D 26 ? 20 1 1 B DG 33 1_555 C DC 4 1_555 -0.146 -0.210 -0.883 -5.469 -1.165 0.304 29 C_DG24:DC25_D C 24 ? D 25 ? 19 1 1 B DA 34 1_555 C DT 3 1_555 0.159 -0.169 -0.622 -3.795 -1.227 -3.138 30 C_DA25:DT24_D C 25 ? D 24 ? 20 1 1 B DC 35 1_555 C DG 2 1_555 0.169 -0.375 -1.168 0.571 0.629 1.505 31 C_DC26:DG23_D C 26 ? D 23 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 9 1_555 A C 24 1_555 A C 10 1_555 A G 23 1_555 -0.160 -0.723 3.346 -4.879 6.141 34.360 -2.116 -0.466 3.166 10.230 8.128 35.217 1 BB_G-27C-26:G-13C-12_BB B -27 ? B -12 ? B -26 ? B -13 ? 1 A C 10 1_555 A G 23 1_555 A C 11 1_555 A G 22 1_555 0.621 -1.793 3.358 -0.458 2.865 34.664 -3.438 -1.109 3.196 4.798 0.766 34.781 2 BB_C-26C-25:G-14G-13_BB B -26 ? B -13 ? B -25 ? B -14 ? 1 A C 11 1_555 A G 22 1_555 A C 12 1_555 A G 21 1_555 -0.210 -2.237 3.252 0.382 1.644 26.601 -5.271 0.553 3.108 3.569 -0.828 26.653 3 BB_C-25C-24:G-15G-14_BB B -25 ? B -14 ? B -24 ? B -15 ? 1 A C 12 1_555 A G 21 1_555 A G 29 1_555 A C 20 1_555 -1.268 -1.462 3.378 -1.869 27.185 41.719 -3.619 1.385 2.153 34.162 2.349 49.495 4 BB_C-24G-7:C-16G-15_BB B -24 ? B -15 ? B -7 ? B -16 ? 1 A G 29 1_555 A C 20 1_555 A C 30 1_555 A G 19 1_555 -0.379 -1.875 3.069 -2.251 4.562 33.086 -3.937 0.323 2.812 7.951 3.925 33.464 5 BB_G-7C-6:G-17C-16_BB B -7 ? B -16 ? B -6 ? B -17 ? 1 A C 30 1_555 A G 19 1_555 A C 31 1_555 A G 18 1_555 0.250 -2.018 3.493 0.360 8.955 29.289 -5.559 -0.404 2.772 17.208 -0.692 30.601 6 BB_C-6C-5:G-18G-17_BB B -6 ? B -17 ? B -5 ? B -18 ? 1 A C 31 1_555 A G 18 1_555 A A 32 1_555 A U 17 1_555 -0.519 -1.996 2.984 -5.529 12.160 29.484 -5.337 0.138 2.081 22.494 10.228 32.307 7 BB_C-5A-4:U-19G-18_BB B -5 ? B -18 ? B -4 ? B -19 ? 1 A A 32 1_555 A U 17 1_555 A A 33 1_555 A U 16 1_555 -0.563 -1.731 3.188 -0.159 5.394 31.466 -4.061 0.996 2.862 9.856 0.291 31.914 8 BB_A-4A-3:U-20U-19_BB B -4 ? B -19 ? B -3 ? B -20 ? 1 A A 33 1_555 A U 16 1_555 A G 34 1_555 A C 15 1_555 0.256 -1.611 2.964 3.863 7.152 33.132 -3.726 0.093 2.583 12.313 -6.650 34.087 9 BB_A-3G-2:C-21U-20_BB B -3 ? B -20 ? B -2 ? B -21 ? 1 A G 34 1_555 A C 15 1_555 A A 35 1_555 A G 14 1_555 -0.288 -1.456 3.286 10.497 0.654 37.878 -2.245 1.669 3.077 0.985 -15.802 39.260 10 BB_G-2A-1:G-22C-21_BB B -2 ? B -21 ? B -1 ? B -22 ? 1 A G 37 1_555 B DC 26 1_555 A G 38 1_555 B DC 25 1_555 -1.225 1.217 3.903 -5.820 -8.761 36.040 3.249 1.006 3.665 -13.802 9.169 37.495 11 BB_G1G2:DC16DC17_CC B 1 ? C 17 ? B 2 ? C 16 ? 1 A G 38 1_555 B DC 25 1_555 A A 39 1_555 B DT 24 1_555 -0.716 0.045 3.580 0.474 4.897 32.462 -0.840 1.356 3.538 8.697 -0.842 32.822 12 BB_G2A3:DT15DC16_CC B 2 ? C 16 ? B 3 ? C 15 ? 1 A A 39 1_555 B DT 24 1_555 A G 40 1_555 B DC 23 1_555 1.046 -0.690 3.235 -1.701 6.222 29.576 -2.530 -2.335 2.968 12.010 3.283 30.256 13 BB_A3G4:DC14DT15_CC B 3 ? C 15 ? B 4 ? C 14 ? 1 A G 40 1_555 B DC 23 1_555 A A 41 1_555 B DT 22 1_555 0.440 -0.411 3.376 1.097 6.093 29.823 -2.027 -0.613 3.244 11.680 -2.104 30.445 14 BB_G4A5:DT13DC14_CC B 4 ? C 14 ? B 5 ? C 13 ? 1 A A 41 1_555 B DT 22 1_555 A U 42 1_555 B DA 21 1_555 0.544 -1.164 3.348 -0.172 2.755 30.332 -2.771 -1.070 3.229 5.251 0.329 30.454 15 BB_A5U6:DA12DT13_CC B 5 ? C 13 ? B 6 ? C 12 ? 1 A U 42 1_555 B DA 21 1_555 A G 43 1_555 B DC 20 1_555 0.603 -1.497 2.986 1.176 6.528 34.891 -3.291 -0.839 2.690 10.766 -1.939 35.497 16 BB_U6G7:DC11DA12_CC B 6 ? C 12 ? B 7 ? C 11 ? 1 A G 43 1_555 B DC 20 1_555 A A 44 1_555 B DT 19 1_555 0.184 -1.778 2.983 -0.668 6.734 32.854 -4.033 -0.413 2.574 11.750 1.165 33.525 17 BB_G7A8:DT10DC11_CC B 7 ? C 11 ? B 8 ? C 10 ? 1 A A 44 1_555 B DT 19 1_555 A G 45 1_555 B DC 18 1_555 0.211 -1.726 3.460 4.172 2.549 35.890 -3.150 0.272 3.336 4.112 -6.732 36.210 18 BB_A8G9:DC9DT10_CC B 8 ? C 10 ? B 9 ? C 9 ? 1 A G 45 1_555 B DC 18 1_555 A G 46 1_555 B DC 17 1_555 0.430 -1.472 3.158 1.764 4.035 26.723 -4.102 -0.500 2.930 8.656 -3.783 27.077 19 BB_G9G10:DC8DC9_CC B 9 ? C 9 ? B 10 ? C 8 ? 1 A G 46 1_555 B DC 17 1_555 A U 47 1_555 B DA 16 1_555 0.076 -1.554 3.174 -0.167 -0.644 35.328 -2.467 -0.150 3.200 -1.061 0.275 35.334 20 BB_G10U11:DA7DC8_CC B 10 ? C 8 ? B 11 ? C 7 ? 1 B DC 27 1_555 C DG 10 1_555 B DA 28 1_555 C DT 9 1_555 0.406 0.903 3.882 1.066 0.197 31.809 1.604 -0.509 3.899 0.359 -1.944 31.827 21 CC_DC18DA19:DT30DG31_DD C 18 ? D 31 ? C 19 ? D 30 ? 1 B DA 28 1_555 C DT 9 1_555 B DA 29 1_555 C DT 8 1_555 -1.885 0.136 3.591 -6.397 0.462 34.825 0.145 2.019 3.867 0.764 10.577 35.393 22 CC_DA19DA20:DT29DT30_DD C 19 ? D 30 ? C 20 ? D 29 ? 1 B DA 29 1_555 C DT 8 1_555 B DA 30 1_555 C DT 7 1_555 -0.235 -0.189 3.441 -2.511 1.333 38.999 -0.450 0.033 3.441 1.994 3.756 39.099 23 CC_DA20DA21:DT28DT29_DD C 20 ? D 29 ? C 21 ? D 28 ? 1 B DA 30 1_555 C DT 7 1_555 B DT 31 1_555 C DA 6 1_555 0.575 -0.673 3.338 -3.447 0.895 29.097 -1.525 -1.885 3.228 1.773 6.828 29.309 24 CC_DA21DT22:DA27DT28_DD C 21 ? D 28 ? C 22 ? D 27 ? 1 B DT 31 1_555 C DA 6 1_555 B DA 32 1_555 C DT 5 1_555 -0.200 0.931 3.517 -1.859 3.054 39.946 0.979 0.061 3.581 4.460 2.715 40.099 25 CC_DT22DA23:DT26DA27_DD C 22 ? D 27 ? C 23 ? D 26 ? 1 B DA 32 1_555 C DT 5 1_555 B DG 33 1_555 C DC 4 1_555 -0.624 -0.581 3.191 -2.838 3.163 31.584 -1.620 0.632 3.162 5.779 5.185 31.862 26 CC_DA23DG24:DC25DT26_DD C 23 ? D 26 ? C 24 ? D 25 ? 1 B DG 33 1_555 C DC 4 1_555 B DA 34 1_555 C DT 3 1_555 -0.670 0.933 3.352 -1.083 2.241 40.104 1.094 0.847 3.414 3.264 1.578 40.178 27 CC_DG24DA25:DT24DC25_DD C 24 ? D 25 ? C 25 ? D 24 ? 1 B DA 34 1_555 C DT 3 1_555 B DC 35 1_555 C DG 2 1_555 1.173 -0.118 3.625 -2.371 0.703 34.915 -0.313 -2.341 3.538 1.169 3.946 35.000 28 CC_DA25DC26:DG23DT24_DD C 25 ? D 24 ? C 26 ? D 23 ? # _pdbx_audit_support.funding_organization 'Japan Agency for Medical Research and Development (AMED)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 G ? ? G ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? 3 ZN ? ? ZN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 "GUANOSINE-5'-MONOPHOSPHATE" G 7 'ZINC ION' ZN # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #