data_8HJ9 # _entry.id 8HJ9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HJ9 pdb_00008hj9 10.2210/pdb8hj9/pdb WWPDB D_1300033717 ? ? EMDB EMD-34835 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB '8HHO contains the same protein in complex with the same ligand in a different binding mode.' 8HHO unspecified PDB '8HIQ contains the same protein in complex with the same ligand in a different binding mode.' 8HIQ unspecified PDB '8HIZ contains the same protein in complex with the same ligand in a different binding mode.' 8HIZ unspecified PDB '8HJ3 contains the same protein in complex with the same ligand in a different binding mode.' 8HJ3 unspecified EMDB 'cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP' EMD-34835 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HJ9 _pdbx_database_status.recvd_initial_deposition_date 2022-11-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wakabayashi, T.' 1 ? 'Oide, M.' 2 ? 'Kato, T.' 3 ? 'Nakasako, M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Febs J.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1742-464X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 290 _citation.language ? _citation.page_first 5514 _citation.page_last 5535 _citation.title 'Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/febs.16951 _citation.pdbx_database_id_PubMed 37682540 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wakabayashi, T.' 1 ? primary 'Oide, M.' 2 ? primary 'Kato, T.' 3 ? primary 'Nakasako, M.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glutamate dehydrogenase' 46758.477 1 1.4.1.3 ? ? ? 2 non-polymer syn 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 743.405 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MVEIDPFEMAVKQLERAAQYMDISEEALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETL STVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEY ETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVV AVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANG PVTPEADDILREKGILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHMRDAAY VVAVSRVYQAMKDRGWVKK ; _entity_poly.pdbx_seq_one_letter_code_can ;MVEIDPFEMAVKQLERAAQYMDISEEALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETL STVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEY ETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVV AVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANG PVTPEADDILREKGILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHMRDAAY VVAVSRVYQAMKDRGWVKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 GLU n 1 4 ILE n 1 5 ASP n 1 6 PRO n 1 7 PHE n 1 8 GLU n 1 9 MET n 1 10 ALA n 1 11 VAL n 1 12 LYS n 1 13 GLN n 1 14 LEU n 1 15 GLU n 1 16 ARG n 1 17 ALA n 1 18 ALA n 1 19 GLN n 1 20 TYR n 1 21 MET n 1 22 ASP n 1 23 ILE n 1 24 SER n 1 25 GLU n 1 26 GLU n 1 27 ALA n 1 28 LEU n 1 29 GLU n 1 30 TRP n 1 31 LEU n 1 32 LYS n 1 33 LYS n 1 34 PRO n 1 35 MET n 1 36 ARG n 1 37 ILE n 1 38 VAL n 1 39 GLU n 1 40 VAL n 1 41 SER n 1 42 VAL n 1 43 PRO n 1 44 ILE n 1 45 GLU n 1 46 MET n 1 47 ASP n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 VAL n 1 52 LYS n 1 53 VAL n 1 54 PHE n 1 55 THR n 1 56 GLY n 1 57 PHE n 1 58 ARG n 1 59 VAL n 1 60 GLN n 1 61 HIS n 1 62 ASN n 1 63 TRP n 1 64 ALA n 1 65 ARG n 1 66 GLY n 1 67 PRO n 1 68 THR n 1 69 LYS n 1 70 GLY n 1 71 GLY n 1 72 ILE n 1 73 ARG n 1 74 TRP n 1 75 HIS n 1 76 PRO n 1 77 ALA n 1 78 GLU n 1 79 THR n 1 80 LEU n 1 81 SER n 1 82 THR n 1 83 VAL n 1 84 LYS n 1 85 ALA n 1 86 LEU n 1 87 ALA n 1 88 THR n 1 89 TRP n 1 90 MET n 1 91 THR n 1 92 TRP n 1 93 LYS n 1 94 VAL n 1 95 ALA n 1 96 VAL n 1 97 VAL n 1 98 ASP n 1 99 LEU n 1 100 PRO n 1 101 TYR n 1 102 GLY n 1 103 GLY n 1 104 GLY n 1 105 LYS n 1 106 GLY n 1 107 GLY n 1 108 ILE n 1 109 ILE n 1 110 VAL n 1 111 ASN n 1 112 PRO n 1 113 LYS n 1 114 GLU n 1 115 LEU n 1 116 SER n 1 117 GLU n 1 118 ARG n 1 119 GLU n 1 120 GLN n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 ALA n 1 125 ARG n 1 126 ALA n 1 127 TYR n 1 128 ILE n 1 129 ARG n 1 130 ALA n 1 131 VAL n 1 132 TYR n 1 133 ASP n 1 134 VAL n 1 135 ILE n 1 136 GLY n 1 137 PRO n 1 138 TRP n 1 139 THR n 1 140 ASP n 1 141 ILE n 1 142 PRO n 1 143 ALA n 1 144 PRO n 1 145 ASP n 1 146 VAL n 1 147 TYR n 1 148 THR n 1 149 ASN n 1 150 PRO n 1 151 LYS n 1 152 ILE n 1 153 MET n 1 154 GLY n 1 155 TRP n 1 156 MET n 1 157 MET n 1 158 ASP n 1 159 GLU n 1 160 TYR n 1 161 GLU n 1 162 THR n 1 163 ILE n 1 164 MET n 1 165 ARG n 1 166 ARG n 1 167 LYS n 1 168 GLY n 1 169 PRO n 1 170 ALA n 1 171 PHE n 1 172 GLY n 1 173 VAL n 1 174 ILE n 1 175 THR n 1 176 GLY n 1 177 LYS n 1 178 PRO n 1 179 LEU n 1 180 SER n 1 181 ILE n 1 182 GLY n 1 183 GLY n 1 184 SER n 1 185 LEU n 1 186 GLY n 1 187 ARG n 1 188 GLY n 1 189 THR n 1 190 ALA n 1 191 THR n 1 192 ALA n 1 193 GLN n 1 194 GLY n 1 195 ALA n 1 196 ILE n 1 197 PHE n 1 198 THR n 1 199 ILE n 1 200 ARG n 1 201 GLU n 1 202 ALA n 1 203 ALA n 1 204 LYS n 1 205 ALA n 1 206 LEU n 1 207 GLY n 1 208 ILE n 1 209 ASP n 1 210 LEU n 1 211 LYS n 1 212 GLY n 1 213 LYS n 1 214 LYS n 1 215 ILE n 1 216 ALA n 1 217 VAL n 1 218 GLN n 1 219 GLY n 1 220 TYR n 1 221 GLY n 1 222 ASN n 1 223 ALA n 1 224 GLY n 1 225 TYR n 1 226 TYR n 1 227 THR n 1 228 ALA n 1 229 LYS n 1 230 LEU n 1 231 ALA n 1 232 LYS n 1 233 GLU n 1 234 GLN n 1 235 LEU n 1 236 GLY n 1 237 MET n 1 238 THR n 1 239 VAL n 1 240 VAL n 1 241 ALA n 1 242 VAL n 1 243 SER n 1 244 ASP n 1 245 SER n 1 246 ARG n 1 247 GLY n 1 248 GLY n 1 249 ILE n 1 250 TYR n 1 251 ASN n 1 252 PRO n 1 253 ASP n 1 254 GLY n 1 255 LEU n 1 256 ASP n 1 257 PRO n 1 258 ASP n 1 259 GLU n 1 260 VAL n 1 261 LEU n 1 262 LYS n 1 263 TRP n 1 264 LYS n 1 265 ARG n 1 266 GLU n 1 267 HIS n 1 268 GLY n 1 269 SER n 1 270 VAL n 1 271 LYS n 1 272 ASP n 1 273 PHE n 1 274 PRO n 1 275 GLY n 1 276 ALA n 1 277 THR n 1 278 ASN n 1 279 ILE n 1 280 THR n 1 281 ASN n 1 282 GLU n 1 283 GLU n 1 284 LEU n 1 285 LEU n 1 286 GLU n 1 287 LEU n 1 288 GLU n 1 289 VAL n 1 290 ASP n 1 291 VAL n 1 292 LEU n 1 293 ALA n 1 294 PRO n 1 295 ALA n 1 296 ALA n 1 297 ILE n 1 298 GLU n 1 299 GLU n 1 300 VAL n 1 301 ILE n 1 302 THR n 1 303 GLU n 1 304 LYS n 1 305 ASN n 1 306 ALA n 1 307 ASP n 1 308 ASN n 1 309 ILE n 1 310 LYS n 1 311 ALA n 1 312 LYS n 1 313 ILE n 1 314 VAL n 1 315 ALA n 1 316 GLU n 1 317 VAL n 1 318 ALA n 1 319 ASN n 1 320 GLY n 1 321 PRO n 1 322 VAL n 1 323 THR n 1 324 PRO n 1 325 GLU n 1 326 ALA n 1 327 ASP n 1 328 ASP n 1 329 ILE n 1 330 LEU n 1 331 ARG n 1 332 GLU n 1 333 LYS n 1 334 GLY n 1 335 ILE n 1 336 LEU n 1 337 GLN n 1 338 ILE n 1 339 PRO n 1 340 ASP n 1 341 PHE n 1 342 LEU n 1 343 CYS n 1 344 ASN n 1 345 ALA n 1 346 GLY n 1 347 GLY n 1 348 VAL n 1 349 THR n 1 350 VAL n 1 351 SER n 1 352 TYR n 1 353 PHE n 1 354 GLU n 1 355 TRP n 1 356 VAL n 1 357 GLN n 1 358 ASN n 1 359 ILE n 1 360 ASN n 1 361 GLY n 1 362 TYR n 1 363 TYR n 1 364 TRP n 1 365 THR n 1 366 GLU n 1 367 GLU n 1 368 GLU n 1 369 VAL n 1 370 ARG n 1 371 GLU n 1 372 LYS n 1 373 LEU n 1 374 ASP n 1 375 LYS n 1 376 LYS n 1 377 MET n 1 378 THR n 1 379 LYS n 1 380 ALA n 1 381 PHE n 1 382 TRP n 1 383 GLU n 1 384 VAL n 1 385 TYR n 1 386 ASN n 1 387 THR n 1 388 HIS n 1 389 LYS n 1 390 ASP n 1 391 LYS n 1 392 ASN n 1 393 ILE n 1 394 HIS n 1 395 MET n 1 396 ARG n 1 397 ASP n 1 398 ALA n 1 399 ALA n 1 400 TYR n 1 401 VAL n 1 402 VAL n 1 403 ALA n 1 404 VAL n 1 405 SER n 1 406 ARG n 1 407 VAL n 1 408 TYR n 1 409 GLN n 1 410 ALA n 1 411 MET n 1 412 LYS n 1 413 ASP n 1 414 ARG n 1 415 GLY n 1 416 TRP n 1 417 VAL n 1 418 LYS n 1 419 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 419 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gdhA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus profundus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 49899 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DHE3_THEPR _struct_ref.pdbx_db_accession O74024 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVEIDPFEMAVKQLERAAQYMDISEEALEWLKKPMRIVEVSVPIEMDDGSVKVFTGFRVQHNWARGPTKGGIRWHPAETL STVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQERLARAYIRAVYDVIGPWTDIPAPDVYTNPKIMGWMMDEY ETIMRRKGPAFGVITGKPLSIGGSLGRGTATAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKLAKEQLGMTVV AVSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITEKNADNIKAKIVAEVANG PVTPEADDILREKGILQIPDFLCNAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKMTKAFWEVYNTHKDKNIHMRDAAY VVAVSRVYQAMKDRGWVKK ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8HJ9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 419 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O74024 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 419 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 419 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAP non-polymer . 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ;2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE ; 'C21 H28 N7 O17 P3' 743.405 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HJ9 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8HJ9 _struct.title 'cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HJ9 _struct_keywords.text 'Complex, Coenzyme, NADP, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 4 ? GLN A 19 ? ILE A 4 GLN A 19 1 ? 16 HELX_P HELX_P2 AA2 SER A 24 ? LYS A 33 ? SER A 24 LYS A 33 1 ? 10 HELX_P HELX_P3 AA3 THR A 79 ? VAL A 96 ? THR A 79 VAL A 96 1 ? 18 HELX_P HELX_P4 AA4 ASN A 111 ? LEU A 115 ? ASN A 111 LEU A 115 5 ? 5 HELX_P HELX_P5 AA5 SER A 116 ? TYR A 132 ? SER A 116 TYR A 132 1 ? 17 HELX_P HELX_P6 AA6 ASP A 133 ? ILE A 135 ? ASP A 133 ILE A 135 5 ? 3 HELX_P HELX_P7 AA7 ASN A 149 ? ARG A 165 ? ASN A 149 ARG A 165 1 ? 17 HELX_P HELX_P8 AA8 PRO A 169 ? ILE A 174 ? PRO A 169 ILE A 174 5 ? 6 HELX_P HELX_P9 AA9 THR A 189 ? GLY A 207 ? THR A 189 GLY A 207 1 ? 19 HELX_P HELX_P10 AB1 GLY A 221 ? GLN A 234 ? GLY A 221 GLN A 234 1 ? 14 HELX_P HELX_P11 AB2 ASP A 256 ? GLY A 268 ? ASP A 256 GLY A 268 1 ? 13 HELX_P HELX_P12 AB3 THR A 280 ? LEU A 287 ? THR A 280 LEU A 287 1 ? 8 HELX_P HELX_P13 AB4 THR A 302 ? ALA A 306 ? THR A 302 ALA A 306 5 ? 5 HELX_P HELX_P14 AB5 THR A 323 ? LYS A 333 ? THR A 323 LYS A 333 1 ? 11 HELX_P HELX_P15 AB6 PRO A 339 ? ASN A 344 ? PRO A 339 ASN A 344 1 ? 6 HELX_P HELX_P16 AB7 ASN A 344 ? GLY A 361 ? ASN A 344 GLY A 361 1 ? 18 HELX_P HELX_P17 AB8 THR A 365 ? ASN A 392 ? THR A 365 ASN A 392 1 ? 28 HELX_P HELX_P18 AB9 HIS A 394 ? ARG A 414 ? HIS A 394 ARG A 414 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA2 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 36 ? GLU A 45 ? ARG A 36 GLU A 45 AA1 2 VAL A 51 ? ASN A 62 ? VAL A 51 ASN A 62 AA1 3 GLY A 102 ? ILE A 108 ? GLY A 102 ILE A 108 AA1 4 THR A 68 ? ARG A 73 ? THR A 68 ARG A 73 AA1 5 ASP A 140 ? ALA A 143 ? ASP A 140 ALA A 143 AA2 1 THR A 277 ? ILE A 279 ? THR A 277 ILE A 279 AA2 2 GLY A 248 ? TYR A 250 ? GLY A 248 TYR A 250 AA2 3 THR A 238 ? SER A 243 ? THR A 238 SER A 243 AA2 4 LYS A 214 ? GLN A 218 ? LYS A 214 GLN A 218 AA2 5 VAL A 291 ? PRO A 294 ? VAL A 291 PRO A 294 AA2 6 ILE A 313 ? ALA A 315 ? ILE A 313 ALA A 315 AA2 7 LEU A 336 ? ILE A 338 ? LEU A 336 ILE A 338 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 40 ? N VAL A 40 O GLY A 56 ? O GLY A 56 AA1 2 3 N PHE A 57 ? N PHE A 57 O GLY A 107 ? O GLY A 107 AA1 3 4 O GLY A 106 ? O GLY A 106 N GLY A 71 ? N GLY A 71 AA1 4 5 N GLY A 70 ? N GLY A 70 O ILE A 141 ? O ILE A 141 AA2 1 2 O ILE A 279 ? O ILE A 279 N GLY A 248 ? N GLY A 248 AA2 2 3 O ILE A 249 ? O ILE A 249 N VAL A 242 ? N VAL A 242 AA2 3 4 O ALA A 241 ? O ALA A 241 N VAL A 217 ? N VAL A 217 AA2 4 5 N ALA A 216 ? N ALA A 216 O ALA A 293 ? O ALA A 293 AA2 5 6 N LEU A 292 ? N LEU A 292 O ALA A 315 ? O ALA A 315 AA2 6 7 N VAL A 314 ? N VAL A 314 O LEU A 336 ? O LEU A 336 # _atom_sites.entry_id 8HJ9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 GLU 3 3 ? ? ? A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 MET 35 35 35 MET MET A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 HIS 61 61 61 HIS HIS A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 TRP 74 74 74 TRP TRP A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 MET 90 90 90 MET MET A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 TRP 92 92 92 TRP TRP A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 TYR 101 101 101 TYR TYR A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 SER 116 116 116 SER SER A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 GLN 120 120 120 GLN GLN A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 ALA 130 130 130 ALA ALA A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 ASP 133 133 133 ASP ASP A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ILE 135 135 135 ILE ILE A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 TRP 138 138 138 TRP TRP A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 PRO 142 142 142 PRO PRO A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 PRO 144 144 144 PRO PRO A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ASN 149 149 149 ASN ASN A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 TRP 155 155 155 TRP TRP A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 TYR 160 160 160 TYR TYR A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 MET 164 164 164 MET MET A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 ARG 166 166 166 ARG ARG A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 GLY 168 168 168 GLY GLY A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 GLY 182 182 182 GLY GLY A . n A 1 183 GLY 183 183 183 GLY GLY A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 THR 191 191 191 THR THR A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 GLN 193 193 193 GLN GLN A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 PHE 197 197 197 PHE PHE A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 ARG 200 200 200 ARG ARG A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 ILE 215 215 215 ILE ILE A . n A 1 216 ALA 216 216 216 ALA ALA A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 TYR 220 220 220 TYR TYR A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 ASN 222 222 222 ASN ASN A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 TYR 225 225 225 TYR TYR A . n A 1 226 TYR 226 226 226 TYR TYR A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 LYS 232 232 232 LYS LYS A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 GLN 234 234 234 GLN GLN A . n A 1 235 LEU 235 235 235 LEU LEU A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 MET 237 237 237 MET MET A . n A 1 238 THR 238 238 238 THR THR A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 ASP 244 244 244 ASP ASP A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 ARG 246 246 246 ARG ARG A . n A 1 247 GLY 247 247 247 GLY GLY A . n A 1 248 GLY 248 248 248 GLY GLY A . n A 1 249 ILE 249 249 249 ILE ILE A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 ASN 251 251 251 ASN ASN A . n A 1 252 PRO 252 252 252 PRO PRO A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 ASP 258 258 258 ASP ASP A . n A 1 259 GLU 259 259 259 GLU GLU A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 TRP 263 263 263 TRP TRP A . n A 1 264 LYS 264 264 264 LYS LYS A . n A 1 265 ARG 265 265 265 ARG ARG A . n A 1 266 GLU 266 266 266 GLU GLU A . n A 1 267 HIS 267 267 267 HIS HIS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 ASP 272 272 272 ASP ASP A . n A 1 273 PHE 273 273 273 PHE PHE A . n A 1 274 PRO 274 274 274 PRO PRO A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 ALA 276 276 276 ALA ALA A . n A 1 277 THR 277 277 277 THR THR A . n A 1 278 ASN 278 278 278 ASN ASN A . n A 1 279 ILE 279 279 279 ILE ILE A . n A 1 280 THR 280 280 280 THR THR A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 GLU 282 282 282 GLU GLU A . n A 1 283 GLU 283 283 283 GLU GLU A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 LEU 285 285 285 LEU LEU A . n A 1 286 GLU 286 286 286 GLU GLU A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 VAL 289 289 289 VAL VAL A . n A 1 290 ASP 290 290 290 ASP ASP A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 ALA 295 295 295 ALA ALA A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 ILE 297 297 297 ILE ILE A . n A 1 298 GLU 298 298 298 GLU GLU A . n A 1 299 GLU 299 299 299 GLU GLU A . n A 1 300 VAL 300 300 300 VAL VAL A . n A 1 301 ILE 301 301 301 ILE ILE A . n A 1 302 THR 302 302 302 THR THR A . n A 1 303 GLU 303 303 303 GLU GLU A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 ASN 305 305 305 ASN ASN A . n A 1 306 ALA 306 306 306 ALA ALA A . n A 1 307 ASP 307 307 307 ASP ASP A . n A 1 308 ASN 308 308 308 ASN ASN A . n A 1 309 ILE 309 309 309 ILE ILE A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 ALA 311 311 311 ALA ALA A . n A 1 312 LYS 312 312 312 LYS LYS A . n A 1 313 ILE 313 313 313 ILE ILE A . n A 1 314 VAL 314 314 314 VAL VAL A . n A 1 315 ALA 315 315 315 ALA ALA A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 VAL 317 317 317 VAL VAL A . n A 1 318 ALA 318 318 318 ALA ALA A . n A 1 319 ASN 319 319 319 ASN ASN A . n A 1 320 GLY 320 320 320 GLY GLY A . n A 1 321 PRO 321 321 321 PRO PRO A . n A 1 322 VAL 322 322 322 VAL VAL A . n A 1 323 THR 323 323 323 THR THR A . n A 1 324 PRO 324 324 324 PRO PRO A . n A 1 325 GLU 325 325 325 GLU GLU A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 ASP 327 327 327 ASP ASP A . n A 1 328 ASP 328 328 328 ASP ASP A . n A 1 329 ILE 329 329 329 ILE ILE A . n A 1 330 LEU 330 330 330 LEU LEU A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 GLU 332 332 332 GLU GLU A . n A 1 333 LYS 333 333 333 LYS LYS A . n A 1 334 GLY 334 334 334 GLY GLY A . n A 1 335 ILE 335 335 335 ILE ILE A . n A 1 336 LEU 336 336 336 LEU LEU A . n A 1 337 GLN 337 337 337 GLN GLN A . n A 1 338 ILE 338 338 338 ILE ILE A . n A 1 339 PRO 339 339 339 PRO PRO A . n A 1 340 ASP 340 340 340 ASP ASP A . n A 1 341 PHE 341 341 341 PHE PHE A . n A 1 342 LEU 342 342 342 LEU LEU A . n A 1 343 CYS 343 343 343 CYS CYS A . n A 1 344 ASN 344 344 344 ASN ASN A . n A 1 345 ALA 345 345 345 ALA ALA A . n A 1 346 GLY 346 346 346 GLY GLY A . n A 1 347 GLY 347 347 347 GLY GLY A . n A 1 348 VAL 348 348 348 VAL VAL A . n A 1 349 THR 349 349 349 THR THR A . n A 1 350 VAL 350 350 350 VAL VAL A . n A 1 351 SER 351 351 351 SER SER A . n A 1 352 TYR 352 352 352 TYR TYR A . n A 1 353 PHE 353 353 353 PHE PHE A . n A 1 354 GLU 354 354 354 GLU GLU A . n A 1 355 TRP 355 355 355 TRP TRP A . n A 1 356 VAL 356 356 356 VAL VAL A . n A 1 357 GLN 357 357 357 GLN GLN A . n A 1 358 ASN 358 358 358 ASN ASN A . n A 1 359 ILE 359 359 359 ILE ILE A . n A 1 360 ASN 360 360 360 ASN ASN A . n A 1 361 GLY 361 361 361 GLY GLY A . n A 1 362 TYR 362 362 362 TYR TYR A . n A 1 363 TYR 363 363 363 TYR TYR A . n A 1 364 TRP 364 364 364 TRP TRP A . n A 1 365 THR 365 365 365 THR THR A . n A 1 366 GLU 366 366 366 GLU GLU A . n A 1 367 GLU 367 367 367 GLU GLU A . n A 1 368 GLU 368 368 368 GLU GLU A . n A 1 369 VAL 369 369 369 VAL VAL A . n A 1 370 ARG 370 370 370 ARG ARG A . n A 1 371 GLU 371 371 371 GLU GLU A . n A 1 372 LYS 372 372 372 LYS LYS A . n A 1 373 LEU 373 373 373 LEU LEU A . n A 1 374 ASP 374 374 374 ASP ASP A . n A 1 375 LYS 375 375 375 LYS LYS A . n A 1 376 LYS 376 376 376 LYS LYS A . n A 1 377 MET 377 377 377 MET MET A . n A 1 378 THR 378 378 378 THR THR A . n A 1 379 LYS 379 379 379 LYS LYS A . n A 1 380 ALA 380 380 380 ALA ALA A . n A 1 381 PHE 381 381 381 PHE PHE A . n A 1 382 TRP 382 382 382 TRP TRP A . n A 1 383 GLU 383 383 383 GLU GLU A . n A 1 384 VAL 384 384 384 VAL VAL A . n A 1 385 TYR 385 385 385 TYR TYR A . n A 1 386 ASN 386 386 386 ASN ASN A . n A 1 387 THR 387 387 387 THR THR A . n A 1 388 HIS 388 388 388 HIS HIS A . n A 1 389 LYS 389 389 389 LYS LYS A . n A 1 390 ASP 390 390 390 ASP ASP A . n A 1 391 LYS 391 391 391 LYS LYS A . n A 1 392 ASN 392 392 392 ASN ASN A . n A 1 393 ILE 393 393 393 ILE ILE A . n A 1 394 HIS 394 394 394 HIS HIS A . n A 1 395 MET 395 395 395 MET MET A . n A 1 396 ARG 396 396 396 ARG ARG A . n A 1 397 ASP 397 397 397 ASP ASP A . n A 1 398 ALA 398 398 398 ALA ALA A . n A 1 399 ALA 399 399 399 ALA ALA A . n A 1 400 TYR 400 400 400 TYR TYR A . n A 1 401 VAL 401 401 401 VAL VAL A . n A 1 402 VAL 402 402 402 VAL VAL A . n A 1 403 ALA 403 403 403 ALA ALA A . n A 1 404 VAL 404 404 404 VAL VAL A . n A 1 405 SER 405 405 405 SER SER A . n A 1 406 ARG 406 406 406 ARG ARG A . n A 1 407 VAL 407 407 407 VAL VAL A . n A 1 408 TYR 408 408 408 TYR TYR A . n A 1 409 GLN 409 409 409 GLN GLN A . n A 1 410 ALA 410 410 410 ALA ALA A . n A 1 411 MET 411 411 411 MET MET A . n A 1 412 LYS 412 412 412 LYS LYS A . n A 1 413 ASP 413 413 413 ASP ASP A . n A 1 414 ARG 414 414 414 ARG ARG A . n A 1 415 GLY 415 415 415 GLY GLY A . n A 1 416 TRP 416 416 416 TRP TRP A . n A 1 417 VAL 417 417 417 VAL VAL A . n A 1 418 LYS 418 418 418 LYS LYS A . n A 1 419 LYS 419 419 419 LYS LYS A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email nakasako@phys.keio.ac.jp _pdbx_contact_author.name_first Masayoshi _pdbx_contact_author.name_last Nakasako _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1639-0173 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id NAP _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 501 _pdbx_nonpoly_scheme.pdb_mon_id NAP _pdbx_nonpoly_scheme.auth_mon_id NAP _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-08 2 'Structure model' 2 0 2023-08-09 3 'Structure model' 2 1 2023-09-20 4 'Structure model' 2 2 2023-12-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' author 'Coordinate replacement' 'Atomic clashes' 'All close contacts between heavy atoms were removed.' # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' pdbx_contact_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' citation 6 3 'Structure model' citation_author 7 4 'Structure model' citation 8 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.Cartn_x' 2 2 'Structure model' '_atom_site.Cartn_y' 3 2 'Structure model' '_atom_site.Cartn_z' 4 3 'Structure model' '_citation.country' 5 3 'Structure model' '_citation.journal_abbrev' 6 3 'Structure model' '_citation.journal_id_CSD' 7 3 'Structure model' '_citation.journal_id_ISSN' 8 3 'Structure model' '_citation.pdbx_database_id_DOI' 9 3 'Structure model' '_citation.pdbx_database_id_PubMed' 10 3 'Structure model' '_citation.title' 11 3 'Structure model' '_citation.year' 12 3 'Structure model' '_citation_author.identifier_ORCID' 13 4 'Structure model' '_citation.journal_volume' 14 4 'Structure model' '_citation.page_first' 15 4 'Structure model' '_citation.page_last' 16 4 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_entry_details.entry_id 8HJ9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HJ9 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_reconstruction.entry_id 8HJ9 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.12 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 94360 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Hexamer of glutamate dehydrogenase in the presence of NADP' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8HJ9 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'JEOL CRYO ARM 300' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode OTHER _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 3300 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material MOLYBDENUM _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8HJ9 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HJ9 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8HJ9 _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 74 ? ? -95.64 57.49 2 1 ASP A 98 ? ? 60.60 60.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 13 ? CG ? A GLN 13 CG 2 1 Y 1 A GLN 13 ? CD ? A GLN 13 CD 3 1 Y 1 A GLN 13 ? OE1 ? A GLN 13 OE1 4 1 Y 1 A GLN 13 ? NE2 ? A GLN 13 NE2 5 1 Y 1 A ASP 22 ? CG ? A ASP 22 CG 6 1 Y 1 A ASP 22 ? OD1 ? A ASP 22 OD1 7 1 Y 1 A ASP 22 ? OD2 ? A ASP 22 OD2 8 1 Y 1 A LYS 113 ? CG ? A LYS 113 CG 9 1 Y 1 A LYS 113 ? CD ? A LYS 113 CD 10 1 Y 1 A LYS 113 ? CE ? A LYS 113 CE 11 1 Y 1 A LYS 113 ? NZ ? A LYS 113 NZ 12 1 Y 1 A LYS 211 ? CG ? A LYS 211 CG 13 1 Y 1 A LYS 211 ? CD ? A LYS 211 CD 14 1 Y 1 A LYS 211 ? CE ? A LYS 211 CE 15 1 Y 1 A LYS 211 ? NZ ? A LYS 211 NZ 16 1 Y 1 A ARG 246 ? CG ? A ARG 246 CG 17 1 Y 1 A ARG 246 ? CD ? A ARG 246 CD 18 1 Y 1 A ARG 246 ? NE ? A ARG 246 NE 19 1 Y 1 A ARG 246 ? CZ ? A ARG 246 CZ 20 1 Y 1 A ARG 246 ? NH1 ? A ARG 246 NH1 21 1 Y 1 A ARG 246 ? NH2 ? A ARG 246 NH2 22 1 Y 1 A ARG 265 ? CG ? A ARG 265 CG 23 1 Y 1 A ARG 265 ? CD ? A ARG 265 CD 24 1 Y 1 A ARG 265 ? NE ? A ARG 265 NE 25 1 Y 1 A ARG 265 ? CZ ? A ARG 265 CZ 26 1 Y 1 A ARG 265 ? NH1 ? A ARG 265 NH1 27 1 Y 1 A ARG 265 ? NH2 ? A ARG 265 NH2 28 1 Y 1 A GLU 266 ? CG ? A GLU 266 CG 29 1 Y 1 A GLU 266 ? CD ? A GLU 266 CD 30 1 Y 1 A GLU 266 ? OE1 ? A GLU 266 OE1 31 1 Y 1 A GLU 266 ? OE2 ? A GLU 266 OE2 32 1 Y 1 A LYS 271 ? CG ? A LYS 271 CG 33 1 Y 1 A LYS 271 ? CD ? A LYS 271 CD 34 1 Y 1 A LYS 271 ? CE ? A LYS 271 CE 35 1 Y 1 A LYS 271 ? NZ ? A LYS 271 NZ 36 1 Y 1 A LYS 304 ? CG ? A LYS 304 CG 37 1 Y 1 A LYS 304 ? CD ? A LYS 304 CD 38 1 Y 1 A LYS 304 ? CE ? A LYS 304 CE 39 1 Y 1 A LYS 304 ? NZ ? A LYS 304 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A GLU 3 ? A GLU 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAP PA P N R 247 NAP O1A O N N 248 NAP O2A O N N 249 NAP O5B O N N 250 NAP C5B C N N 251 NAP C4B C N R 252 NAP O4B O N N 253 NAP C3B C N R 254 NAP O3B O N N 255 NAP C2B C N R 256 NAP O2B O N N 257 NAP C1B C N R 258 NAP N9A N Y N 259 NAP C8A C Y N 260 NAP N7A N Y N 261 NAP C5A C Y N 262 NAP C6A C Y N 263 NAP N6A N N N 264 NAP N1A N Y N 265 NAP C2A C Y N 266 NAP N3A N Y N 267 NAP C4A C Y N 268 NAP O3 O N N 269 NAP PN P N N 270 NAP O1N O N N 271 NAP O2N O N N 272 NAP O5D O N N 273 NAP C5D C N N 274 NAP C4D C N R 275 NAP O4D O N N 276 NAP C3D C N S 277 NAP O3D O N N 278 NAP C2D C N R 279 NAP O2D O N N 280 NAP C1D C N R 281 NAP N1N N Y N 282 NAP C2N C Y N 283 NAP C3N C Y N 284 NAP C7N C N N 285 NAP O7N O N N 286 NAP N7N N N N 287 NAP C4N C Y N 288 NAP C5N C Y N 289 NAP C6N C Y N 290 NAP P2B P N N 291 NAP O1X O N N 292 NAP O2X O N N 293 NAP O3X O N N 294 NAP HOA2 H N N 295 NAP H51A H N N 296 NAP H52A H N N 297 NAP H4B H N N 298 NAP H3B H N N 299 NAP HO3A H N N 300 NAP H2B H N N 301 NAP H1B H N N 302 NAP H8A H N N 303 NAP H61A H N N 304 NAP H62A H N N 305 NAP H2A H N N 306 NAP H51N H N N 307 NAP H52N H N N 308 NAP H4D H N N 309 NAP H3D H N N 310 NAP HO3N H N N 311 NAP H2D H N N 312 NAP HO2N H N N 313 NAP H1D H N N 314 NAP H2N H N N 315 NAP H71N H N N 316 NAP H72N H N N 317 NAP H4N H N N 318 NAP H5N H N N 319 NAP H6N H N N 320 NAP HOP2 H N N 321 NAP HOP3 H N N 322 PHE N N N N 323 PHE CA C N S 324 PHE C C N N 325 PHE O O N N 326 PHE CB C N N 327 PHE CG C Y N 328 PHE CD1 C Y N 329 PHE CD2 C Y N 330 PHE CE1 C Y N 331 PHE CE2 C Y N 332 PHE CZ C Y N 333 PHE OXT O N N 334 PHE H H N N 335 PHE H2 H N N 336 PHE HA H N N 337 PHE HB2 H N N 338 PHE HB3 H N N 339 PHE HD1 H N N 340 PHE HD2 H N N 341 PHE HE1 H N N 342 PHE HE2 H N N 343 PHE HZ H N N 344 PHE HXT H N N 345 PRO N N N N 346 PRO CA C N S 347 PRO C C N N 348 PRO O O N N 349 PRO CB C N N 350 PRO CG C N N 351 PRO CD C N N 352 PRO OXT O N N 353 PRO H H N N 354 PRO HA H N N 355 PRO HB2 H N N 356 PRO HB3 H N N 357 PRO HG2 H N N 358 PRO HG3 H N N 359 PRO HD2 H N N 360 PRO HD3 H N N 361 PRO HXT H N N 362 SER N N N N 363 SER CA C N S 364 SER C C N N 365 SER O O N N 366 SER CB C N N 367 SER OG O N N 368 SER OXT O N N 369 SER H H N N 370 SER H2 H N N 371 SER HA H N N 372 SER HB2 H N N 373 SER HB3 H N N 374 SER HG H N N 375 SER HXT H N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 VAL N N N N 445 VAL CA C N S 446 VAL C C N N 447 VAL O O N N 448 VAL CB C N N 449 VAL CG1 C N N 450 VAL CG2 C N N 451 VAL OXT O N N 452 VAL H H N N 453 VAL H2 H N N 454 VAL HA H N N 455 VAL HB H N N 456 VAL HG11 H N N 457 VAL HG12 H N N 458 VAL HG13 H N N 459 VAL HG21 H N N 460 VAL HG22 H N N 461 VAL HG23 H N N 462 VAL HXT H N N 463 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAP PA O1A doub N N 235 NAP PA O2A sing N N 236 NAP PA O5B sing N N 237 NAP PA O3 sing N N 238 NAP O2A HOA2 sing N N 239 NAP O5B C5B sing N N 240 NAP C5B C4B sing N N 241 NAP C5B H51A sing N N 242 NAP C5B H52A sing N N 243 NAP C4B O4B sing N N 244 NAP C4B C3B sing N N 245 NAP C4B H4B sing N N 246 NAP O4B C1B sing N N 247 NAP C3B O3B sing N N 248 NAP C3B C2B sing N N 249 NAP C3B H3B sing N N 250 NAP O3B HO3A sing N N 251 NAP C2B O2B sing N N 252 NAP C2B C1B sing N N 253 NAP C2B H2B sing N N 254 NAP O2B P2B sing N N 255 NAP C1B N9A sing N N 256 NAP C1B H1B sing N N 257 NAP N9A C8A sing Y N 258 NAP N9A C4A sing Y N 259 NAP C8A N7A doub Y N 260 NAP C8A H8A sing N N 261 NAP N7A C5A sing Y N 262 NAP C5A C6A sing Y N 263 NAP C5A C4A doub Y N 264 NAP C6A N6A sing N N 265 NAP C6A N1A doub Y N 266 NAP N6A H61A sing N N 267 NAP N6A H62A sing N N 268 NAP N1A C2A sing Y N 269 NAP C2A N3A doub Y N 270 NAP C2A H2A sing N N 271 NAP N3A C4A sing Y N 272 NAP O3 PN sing N N 273 NAP PN O1N doub N N 274 NAP PN O2N sing N N 275 NAP PN O5D sing N N 276 NAP O5D C5D sing N N 277 NAP C5D C4D sing N N 278 NAP C5D H51N sing N N 279 NAP C5D H52N sing N N 280 NAP C4D O4D sing N N 281 NAP C4D C3D sing N N 282 NAP C4D H4D sing N N 283 NAP O4D C1D sing N N 284 NAP C3D O3D sing N N 285 NAP C3D C2D sing N N 286 NAP C3D H3D sing N N 287 NAP O3D HO3N sing N N 288 NAP C2D O2D sing N N 289 NAP C2D C1D sing N N 290 NAP C2D H2D sing N N 291 NAP O2D HO2N sing N N 292 NAP C1D N1N sing N N 293 NAP C1D H1D sing N N 294 NAP N1N C2N sing Y N 295 NAP N1N C6N doub Y N 296 NAP C2N C3N doub Y N 297 NAP C2N H2N sing N N 298 NAP C3N C7N sing N N 299 NAP C3N C4N sing Y N 300 NAP C7N O7N doub N N 301 NAP C7N N7N sing N N 302 NAP N7N H71N sing N N 303 NAP N7N H72N sing N N 304 NAP C4N C5N doub Y N 305 NAP C4N H4N sing N N 306 NAP C5N C6N sing Y N 307 NAP C5N H5N sing N N 308 NAP C6N H6N sing N N 309 NAP P2B O1X doub N N 310 NAP P2B O2X sing N N 311 NAP P2B O3X sing N N 312 NAP O2X HOP2 sing N N 313 NAP O3X HOP3 sing N N 314 PHE N CA sing N N 315 PHE N H sing N N 316 PHE N H2 sing N N 317 PHE CA C sing N N 318 PHE CA CB sing N N 319 PHE CA HA sing N N 320 PHE C O doub N N 321 PHE C OXT sing N N 322 PHE CB CG sing N N 323 PHE CB HB2 sing N N 324 PHE CB HB3 sing N N 325 PHE CG CD1 doub Y N 326 PHE CG CD2 sing Y N 327 PHE CD1 CE1 sing Y N 328 PHE CD1 HD1 sing N N 329 PHE CD2 CE2 doub Y N 330 PHE CD2 HD2 sing N N 331 PHE CE1 CZ doub Y N 332 PHE CE1 HE1 sing N N 333 PHE CE2 CZ sing Y N 334 PHE CE2 HE2 sing N N 335 PHE CZ HZ sing N N 336 PHE OXT HXT sing N N 337 PRO N CA sing N N 338 PRO N CD sing N N 339 PRO N H sing N N 340 PRO CA C sing N N 341 PRO CA CB sing N N 342 PRO CA HA sing N N 343 PRO C O doub N N 344 PRO C OXT sing N N 345 PRO CB CG sing N N 346 PRO CB HB2 sing N N 347 PRO CB HB3 sing N N 348 PRO CG CD sing N N 349 PRO CG HG2 sing N N 350 PRO CG HG3 sing N N 351 PRO CD HD2 sing N N 352 PRO CD HD3 sing N N 353 PRO OXT HXT sing N N 354 SER N CA sing N N 355 SER N H sing N N 356 SER N H2 sing N N 357 SER CA C sing N N 358 SER CA CB sing N N 359 SER CA HA sing N N 360 SER C O doub N N 361 SER C OXT sing N N 362 SER CB OG sing N N 363 SER CB HB2 sing N N 364 SER CB HB3 sing N N 365 SER OG HG sing N N 366 SER OXT HXT sing N N 367 THR N CA sing N N 368 THR N H sing N N 369 THR N H2 sing N N 370 THR CA C sing N N 371 THR CA CB sing N N 372 THR CA HA sing N N 373 THR C O doub N N 374 THR C OXT sing N N 375 THR CB OG1 sing N N 376 THR CB CG2 sing N N 377 THR CB HB sing N N 378 THR OG1 HG1 sing N N 379 THR CG2 HG21 sing N N 380 THR CG2 HG22 sing N N 381 THR CG2 HG23 sing N N 382 THR OXT HXT sing N N 383 TRP N CA sing N N 384 TRP N H sing N N 385 TRP N H2 sing N N 386 TRP CA C sing N N 387 TRP CA CB sing N N 388 TRP CA HA sing N N 389 TRP C O doub N N 390 TRP C OXT sing N N 391 TRP CB CG sing N N 392 TRP CB HB2 sing N N 393 TRP CB HB3 sing N N 394 TRP CG CD1 doub Y N 395 TRP CG CD2 sing Y N 396 TRP CD1 NE1 sing Y N 397 TRP CD1 HD1 sing N N 398 TRP CD2 CE2 doub Y N 399 TRP CD2 CE3 sing Y N 400 TRP NE1 CE2 sing Y N 401 TRP NE1 HE1 sing N N 402 TRP CE2 CZ2 sing Y N 403 TRP CE3 CZ3 doub Y N 404 TRP CE3 HE3 sing N N 405 TRP CZ2 CH2 doub Y N 406 TRP CZ2 HZ2 sing N N 407 TRP CZ3 CH2 sing Y N 408 TRP CZ3 HZ3 sing N N 409 TRP CH2 HH2 sing N N 410 TRP OXT HXT sing N N 411 TYR N CA sing N N 412 TYR N H sing N N 413 TYR N H2 sing N N 414 TYR CA C sing N N 415 TYR CA CB sing N N 416 TYR CA HA sing N N 417 TYR C O doub N N 418 TYR C OXT sing N N 419 TYR CB CG sing N N 420 TYR CB HB2 sing N N 421 TYR CB HB3 sing N N 422 TYR CG CD1 doub Y N 423 TYR CG CD2 sing Y N 424 TYR CD1 CE1 sing Y N 425 TYR CD1 HD1 sing N N 426 TYR CD2 CE2 doub Y N 427 TYR CD2 HD2 sing N N 428 TYR CE1 CZ doub Y N 429 TYR CE1 HE1 sing N N 430 TYR CE2 CZ sing Y N 431 TYR CE2 HE2 sing N N 432 TYR CZ OH sing N N 433 TYR OH HH sing N N 434 TYR OXT HXT sing N N 435 VAL N CA sing N N 436 VAL N H sing N N 437 VAL N H2 sing N N 438 VAL CA C sing N N 439 VAL CA CB sing N N 440 VAL CA HA sing N N 441 VAL C O doub N N 442 VAL C OXT sing N N 443 VAL CB CG1 sing N N 444 VAL CB CG2 sing N N 445 VAL CB HB sing N N 446 VAL CG1 HG11 sing N N 447 VAL CG1 HG12 sing N N 448 VAL CG1 HG13 sing N N 449 VAL CG2 HG21 sing N N 450 VAL CG2 HG22 sing N N 451 VAL CG2 HG23 sing N N 452 VAL OXT HXT sing N N 453 # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 3.0 mM NADP 1 'nicotinamide adenine dinucleotide phosphate' 1 135 mM NaCl 2 'sodium chloride' 1 15 mM Tris 3 'tris(hydroxymethyl)aminomethane' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.264 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 49899 _em_entity_assembly_naturalsource.organism 'Thermococcus profundus' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 1.2 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 10389 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 3037558 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 3.0 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? Warp ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? RELION 3.0 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? RELION 3.0 CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 3.0 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 0.0036 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan jp13480214 1 'Japan Society for the Promotion of Science (JSPS)' Japan jp19204042 2 'Japan Society for the Promotion of Science (JSPS)' Japan jp22244054 3 'Japan Society for the Promotion of Science (JSPS)' Japan jp21H01050 4 'Japan Society for the Promotion of Science (JSPS)' Japan jp26800227 5 'Japan Society for the Promotion of Science (JSPS)' Japan jp18J11653 6 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp15076210 7 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp20050030 8 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp22018027 9 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp23120525 10 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp25120725 11 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp15H01647 12 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan jp17H05891 13 'Japan Science and Technology' Japan JPMJPR22E2 14 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _pdbx_entity_nonpoly.comp_id NAP # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? #