HEADER TRANSPORT PROTEIN 13-DEC-22 8HQA TITLE CRYSTAL STRUCTURE OF THE ECTODOMAIN OF THE MLAD PROTEIN FROM TITLE 2 ESCHERICHIA COLI IN THE RESTING STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERMEMBRANE PHOSPHOLIPID TRANSPORT SYSTEM BINDING PROTEIN COMPND 3 MLAD; COMPND 4 CHAIN: A, B, C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 GENE: MLAD, YRBD, B3193, JW3160; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (D3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS ABC TRANSPORTER, ASYMMETRIC PROTOMER MOVEMENT, CENTRAL CHANNEL, GRAM- KEYWDS 2 NEGATIVE BACTERIA, MLA SYSTEM, TRANSPORT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.DUTTA,S.P.KANAUJIA REVDAT 3 15-MAY-24 8HQA 1 JRNL REVDAT 2 21-FEB-24 8HQA 1 JRNL REVDAT 1 10-JAN-24 8HQA 0 JRNL AUTH A.DUTTA,S.P.KANAUJIA JRNL TITL THE STRUCTURAL FEATURES OF MLAD ILLUMINATE ITS UNIQUE JRNL TITL 2 LIGAND-TRANSPORTING MECHANISM AND ANCESTRY. JRNL REF PROTEIN J. V. 43 298 2024 JRNL REFN ISSN 1572-3887 JRNL PMID 38347327 JRNL DOI 10.1007/S10930-023-10179-5 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 8175 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 442 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.28 REMARK 3 REFLECTION IN BIN (WORKING SET) : 565 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.3590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2645 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.99000 REMARK 3 B22 (A**2) : 1.99000 REMARK 3 B33 (A**2) : -3.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.513 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.381 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 48.063 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.913 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2694 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2599 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3666 ; 1.812 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5991 ; 1.217 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 340 ; 8.027 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 130 ;38.301 ;22.769 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 454 ;20.208 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;16.092 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 374 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3011 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 569 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1369 ; 2.609 ; 4.360 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1368 ; 2.609 ; 4.360 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1703 ; 4.387 ; 6.524 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1704 ; 4.386 ; 6.524 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1325 ; 2.772 ; 4.748 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1326 ; 2.771 ; 4.747 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1963 ; 4.661 ; 6.986 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2680 ; 7.325 ;49.476 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2680 ; 7.300 ;49.481 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 3251 0.10 0.05 REMARK 3 2 A C 3286 0.09 0.05 REMARK 3 3 B C 3280 0.09 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 152 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3877 12.8562 33.8644 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.1732 REMARK 3 T33: 0.0932 T12: -0.0577 REMARK 3 T13: -0.0557 T23: 0.0298 REMARK 3 L TENSOR REMARK 3 L11: 1.7968 L22: 4.0963 REMARK 3 L33: 4.9646 L12: 0.4611 REMARK 3 L13: -0.5434 L23: -1.1037 REMARK 3 S TENSOR REMARK 3 S11: 0.1943 S12: 0.0199 S13: -0.3106 REMARK 3 S21: -0.1044 S22: -0.1263 S23: -0.2929 REMARK 3 S31: 0.0491 S32: 0.4778 S33: -0.0681 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 35 B 152 REMARK 3 ORIGIN FOR THE GROUP (A): -17.0318 26.4439 22.7452 REMARK 3 T TENSOR REMARK 3 T11: 0.2049 T22: 0.0350 REMARK 3 T33: 0.1426 T12: 0.0108 REMARK 3 T13: -0.0665 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 3.0364 L22: 2.4342 REMARK 3 L33: 6.8020 L12: -0.7128 REMARK 3 L13: 0.7390 L23: -0.1483 REMARK 3 S TENSOR REMARK 3 S11: -0.0529 S12: -0.1653 S13: -0.1679 REMARK 3 S21: 0.1142 S22: -0.1206 S23: 0.0242 REMARK 3 S31: -0.0580 S32: -0.2337 S33: 0.1735 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 37 C 152 REMARK 3 ORIGIN FOR THE GROUP (A): -8.4834 18.1761 -1.8674 REMARK 3 T TENSOR REMARK 3 T11: 0.2374 T22: 0.0827 REMARK 3 T33: 0.1276 T12: 0.1135 REMARK 3 T13: 0.0676 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 3.0725 L22: 3.6719 REMARK 3 L33: 6.3631 L12: -1.0677 REMARK 3 L13: 0.3838 L23: -0.6101 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: 0.1303 S13: -0.3114 REMARK 3 S21: -0.0187 S22: 0.1546 S23: -0.2285 REMARK 3 S31: 0.5730 S32: 0.3209 S33: -0.0895 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8HQA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1300034130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : VARIMAX HF REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.4.0 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8680 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 77.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.16600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 0.55200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: TETRAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01 M NICKEL(II) CHLORIDE REMARK 280 HEXAHYDRATE, 0.1 M TRIS PH 8.5, 20% (W/V) PEG MONOETHYL ETHER REMARK 280 2000, MICROBATCH, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.53000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.14000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.14000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.76500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.14000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.14000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 173.29500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.14000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.14000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.76500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.14000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.14000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 173.29500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 115.53000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -64.28000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 64.28000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 -32.14000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 32.14000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -57.76500 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 -32.14000 REMARK 350 BIOMT2 4 0.000000 1.000000 0.000000 32.14000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 57.76500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 22 REMARK 465 HIS A 23 REMARK 465 HIS A 24 REMARK 465 HIS A 25 REMARK 465 HIS A 26 REMARK 465 HIS A 27 REMARK 465 HIS A 28 REMARK 465 ALA A 29 REMARK 465 ASN A 30 REMARK 465 VAL A 31 REMARK 465 THR A 32 REMARK 465 SER A 33 REMARK 465 ILE A 34 REMARK 465 ARG A 35 REMARK 465 THR A 36 REMARK 465 PRO A 121 REMARK 465 GLU A 122 REMARK 465 LEU A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 153 REMARK 465 SER A 154 REMARK 465 LYS A 155 REMARK 465 GLY A 156 REMARK 465 ASP A 157 REMARK 465 ASP A 158 REMARK 465 ASN A 159 REMARK 465 LYS A 160 REMARK 465 ASN A 161 REMARK 465 SER A 162 REMARK 465 GLY A 163 REMARK 465 ASP A 164 REMARK 465 ALA A 165 REMARK 465 PRO A 166 REMARK 465 ALA A 167 REMARK 465 ALA A 168 REMARK 465 ALA A 169 REMARK 465 PRO A 170 REMARK 465 GLY A 171 REMARK 465 ASN A 172 REMARK 465 ASN A 173 REMARK 465 GLU A 174 REMARK 465 THR A 175 REMARK 465 THR A 176 REMARK 465 GLU A 177 REMARK 465 PRO A 178 REMARK 465 VAL A 179 REMARK 465 GLY A 180 REMARK 465 THR A 181 REMARK 465 THR A 182 REMARK 465 LYS A 183 REMARK 465 MET B 22 REMARK 465 HIS B 23 REMARK 465 HIS B 24 REMARK 465 HIS B 25 REMARK 465 HIS B 26 REMARK 465 HIS B 27 REMARK 465 HIS B 28 REMARK 465 ALA B 29 REMARK 465 ASN B 30 REMARK 465 VAL B 31 REMARK 465 THR B 32 REMARK 465 SER B 33 REMARK 465 ILE B 34 REMARK 465 GLY B 153 REMARK 465 SER B 154 REMARK 465 LYS B 155 REMARK 465 GLY B 156 REMARK 465 ASP B 157 REMARK 465 ASP B 158 REMARK 465 ASN B 159 REMARK 465 LYS B 160 REMARK 465 ASN B 161 REMARK 465 SER B 162 REMARK 465 GLY B 163 REMARK 465 ASP B 164 REMARK 465 ALA B 165 REMARK 465 PRO B 166 REMARK 465 ALA B 167 REMARK 465 ALA B 168 REMARK 465 ALA B 169 REMARK 465 PRO B 170 REMARK 465 GLY B 171 REMARK 465 ASN B 172 REMARK 465 ASN B 173 REMARK 465 GLU B 174 REMARK 465 THR B 175 REMARK 465 THR B 176 REMARK 465 GLU B 177 REMARK 465 PRO B 178 REMARK 465 VAL B 179 REMARK 465 GLY B 180 REMARK 465 THR B 181 REMARK 465 THR B 182 REMARK 465 LYS B 183 REMARK 465 MET C 22 REMARK 465 HIS C 23 REMARK 465 HIS C 24 REMARK 465 HIS C 25 REMARK 465 HIS C 26 REMARK 465 HIS C 27 REMARK 465 HIS C 28 REMARK 465 ALA C 29 REMARK 465 ASN C 30 REMARK 465 VAL C 31 REMARK 465 THR C 32 REMARK 465 SER C 33 REMARK 465 ILE C 34 REMARK 465 ARG C 35 REMARK 465 THR C 36 REMARK 465 GLU C 122 REMARK 465 LEU C 123 REMARK 465 GLY C 124 REMARK 465 GLY C 153 REMARK 465 SER C 154 REMARK 465 LYS C 155 REMARK 465 GLY C 156 REMARK 465 ASP C 157 REMARK 465 ASP C 158 REMARK 465 ASN C 159 REMARK 465 LYS C 160 REMARK 465 ASN C 161 REMARK 465 SER C 162 REMARK 465 GLY C 163 REMARK 465 ASP C 164 REMARK 465 ALA C 165 REMARK 465 PRO C 166 REMARK 465 ALA C 167 REMARK 465 ALA C 168 REMARK 465 ALA C 169 REMARK 465 PRO C 170 REMARK 465 GLY C 171 REMARK 465 ASN C 172 REMARK 465 ASN C 173 REMARK 465 GLU C 174 REMARK 465 THR C 175 REMARK 465 THR C 176 REMARK 465 GLU C 177 REMARK 465 PRO C 178 REMARK 465 VAL C 179 REMARK 465 GLY C 180 REMARK 465 THR C 181 REMARK 465 THR C 182 REMARK 465 LYS C 183 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 41 O HOH A 201 1.86 REMARK 500 OD2 ASP A 130 O HOH A 202 1.90 REMARK 500 OE2 GLU A 119 O HOH A 203 2.10 REMARK 500 O HOH A 201 O HOH A 202 2.12 REMARK 500 CE1 HIS B 92 O HOH B 201 2.15 REMARK 500 OG1 THR C 41 O HOH C 201 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU B 122 CB - CA - C ANGL. DEV. = 12.5 DEGREES REMARK 500 ASP C 95 CB - CA - C ANGL. DEV. = -12.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 55 -10.79 85.10 REMARK 500 TYR A 90 70.43 -110.51 REMARK 500 HIS A 92 46.24 -88.46 REMARK 500 ARG B 55 -7.42 82.99 REMARK 500 TYR B 90 71.00 -112.53 REMARK 500 GLU B 122 -82.42 -64.61 REMARK 500 LEU B 123 -167.99 -163.22 REMARK 500 ALA B 126 -158.64 -93.38 REMARK 500 ARG C 55 -6.60 81.37 REMARK 500 TYR C 90 70.11 -111.91 REMARK 500 ALA C 126 -160.84 -100.42 REMARK 500 ASP C 130 115.09 -39.35 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HQA A 29 183 UNP P64604 MLAD_ECOLI 29 183 DBREF 8HQA B 29 183 UNP P64604 MLAD_ECOLI 29 183 DBREF 8HQA C 29 183 UNP P64604 MLAD_ECOLI 29 183 SEQADV 8HQA MET A 22 UNP P64604 INITIATING METHIONINE SEQADV 8HQA HIS A 23 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS A 24 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS A 25 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS A 26 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS A 27 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS A 28 UNP P64604 EXPRESSION TAG SEQADV 8HQA MET B 22 UNP P64604 INITIATING METHIONINE SEQADV 8HQA HIS B 23 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS B 24 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS B 25 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS B 26 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS B 27 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS B 28 UNP P64604 EXPRESSION TAG SEQADV 8HQA MET C 22 UNP P64604 INITIATING METHIONINE SEQADV 8HQA HIS C 23 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS C 24 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS C 25 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS C 26 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS C 27 UNP P64604 EXPRESSION TAG SEQADV 8HQA HIS C 28 UNP P64604 EXPRESSION TAG SEQRES 1 A 162 MET HIS HIS HIS HIS HIS HIS ALA ASN VAL THR SER ILE SEQRES 2 A 162 ARG THR GLU PRO THR TYR THR LEU TYR ALA THR PHE ASP SEQRES 3 A 162 ASN ILE GLY GLY LEU LYS ALA ARG SER PRO VAL SER ILE SEQRES 4 A 162 GLY GLY VAL VAL VAL GLY ARG VAL ALA ASP ILE THR LEU SEQRES 5 A 162 ASP PRO LYS THR TYR LEU PRO ARG VAL THR LEU GLU ILE SEQRES 6 A 162 GLU GLN ARG TYR ASN HIS ILE PRO ASP THR SER SER LEU SEQRES 7 A 162 SER ILE ARG THR SER GLY LEU LEU GLY GLU GLN TYR LEU SEQRES 8 A 162 ALA LEU ASN VAL GLY PHE GLU ASP PRO GLU LEU GLY THR SEQRES 9 A 162 ALA ILE LEU LYS ASP GLY ASP THR ILE GLN ASP THR LYS SEQRES 10 A 162 SER ALA MET VAL LEU GLU ASP LEU ILE GLY GLN PHE LEU SEQRES 11 A 162 TYR GLY SER LYS GLY ASP ASP ASN LYS ASN SER GLY ASP SEQRES 12 A 162 ALA PRO ALA ALA ALA PRO GLY ASN ASN GLU THR THR GLU SEQRES 13 A 162 PRO VAL GLY THR THR LYS SEQRES 1 B 162 MET HIS HIS HIS HIS HIS HIS ALA ASN VAL THR SER ILE SEQRES 2 B 162 ARG THR GLU PRO THR TYR THR LEU TYR ALA THR PHE ASP SEQRES 3 B 162 ASN ILE GLY GLY LEU LYS ALA ARG SER PRO VAL SER ILE SEQRES 4 B 162 GLY GLY VAL VAL VAL GLY ARG VAL ALA ASP ILE THR LEU SEQRES 5 B 162 ASP PRO LYS THR TYR LEU PRO ARG VAL THR LEU GLU ILE SEQRES 6 B 162 GLU GLN ARG TYR ASN HIS ILE PRO ASP THR SER SER LEU SEQRES 7 B 162 SER ILE ARG THR SER GLY LEU LEU GLY GLU GLN TYR LEU SEQRES 8 B 162 ALA LEU ASN VAL GLY PHE GLU ASP PRO GLU LEU GLY THR SEQRES 9 B 162 ALA ILE LEU LYS ASP GLY ASP THR ILE GLN ASP THR LYS SEQRES 10 B 162 SER ALA MET VAL LEU GLU ASP LEU ILE GLY GLN PHE LEU SEQRES 11 B 162 TYR GLY SER LYS GLY ASP ASP ASN LYS ASN SER GLY ASP SEQRES 12 B 162 ALA PRO ALA ALA ALA PRO GLY ASN ASN GLU THR THR GLU SEQRES 13 B 162 PRO VAL GLY THR THR LYS SEQRES 1 C 162 MET HIS HIS HIS HIS HIS HIS ALA ASN VAL THR SER ILE SEQRES 2 C 162 ARG THR GLU PRO THR TYR THR LEU TYR ALA THR PHE ASP SEQRES 3 C 162 ASN ILE GLY GLY LEU LYS ALA ARG SER PRO VAL SER ILE SEQRES 4 C 162 GLY GLY VAL VAL VAL GLY ARG VAL ALA ASP ILE THR LEU SEQRES 5 C 162 ASP PRO LYS THR TYR LEU PRO ARG VAL THR LEU GLU ILE SEQRES 6 C 162 GLU GLN ARG TYR ASN HIS ILE PRO ASP THR SER SER LEU SEQRES 7 C 162 SER ILE ARG THR SER GLY LEU LEU GLY GLU GLN TYR LEU SEQRES 8 C 162 ALA LEU ASN VAL GLY PHE GLU ASP PRO GLU LEU GLY THR SEQRES 9 C 162 ALA ILE LEU LYS ASP GLY ASP THR ILE GLN ASP THR LYS SEQRES 10 C 162 SER ALA MET VAL LEU GLU ASP LEU ILE GLY GLN PHE LEU SEQRES 11 C 162 TYR GLY SER LYS GLY ASP ASP ASN LYS ASN SER GLY ASP SEQRES 12 C 162 ALA PRO ALA ALA ALA PRO GLY ASN ASN GLU THR THR GLU SEQRES 13 C 162 PRO VAL GLY THR THR LYS FORMUL 4 HOH *22(H2 O) HELIX 1 AA1 VAL A 142 TYR A 152 1 11 HELIX 2 AA2 VAL B 142 TYR B 152 1 11 HELIX 3 AA3 VAL C 142 TYR C 152 1 11 SHEET 1 AA1 8 ASP A 132 ILE A 134 0 SHEET 2 AA1 8 THR A 39 THR A 45 1 N TYR A 43 O ILE A 134 SHEET 3 AA1 8 PRO A 80 GLU A 87 -1 O LEU A 84 N LEU A 42 SHEET 4 AA1 8 VAL A 63 LEU A 73 -1 N THR A 72 O ARG A 81 SHEET 5 AA1 8 PRO A 57 ILE A 60 -1 N VAL A 58 O VAL A 65 SHEET 6 AA1 8 GLN A 110 ASN A 115 1 O LEU A 112 N SER A 59 SHEET 7 AA1 8 SER A 98 THR A 103 -1 N SER A 100 O ALA A 113 SHEET 8 AA1 8 ASP A 136 LYS A 138 1 O LYS A 138 N ILE A 101 SHEET 1 AA2 8 ASP B 132 ILE B 134 0 SHEET 2 AA2 8 THR B 39 THR B 45 1 N TYR B 43 O ILE B 134 SHEET 3 AA2 8 PRO B 80 GLU B 87 -1 O LEU B 84 N LEU B 42 SHEET 4 AA2 8 VAL B 63 LEU B 73 -1 N THR B 72 O ARG B 81 SHEET 5 AA2 8 PRO B 57 ILE B 60 -1 N VAL B 58 O VAL B 65 SHEET 6 AA2 8 GLN B 110 ASN B 115 1 O LEU B 114 N SER B 59 SHEET 7 AA2 8 SER B 98 THR B 103 -1 N SER B 100 O ALA B 113 SHEET 8 AA2 8 ASP B 136 LYS B 138 1 O ASP B 136 N LEU B 99 SHEET 1 AA3 8 ASP C 132 ILE C 134 0 SHEET 2 AA3 8 THR C 39 THR C 45 1 N TYR C 43 O ILE C 134 SHEET 3 AA3 8 PRO C 80 GLU C 87 -1 O VAL C 82 N ALA C 44 SHEET 4 AA3 8 VAL C 63 LEU C 73 -1 N THR C 72 O ARG C 81 SHEET 5 AA3 8 PRO C 57 ILE C 60 -1 N VAL C 58 O VAL C 65 SHEET 6 AA3 8 GLN C 110 ASN C 115 1 O LEU C 112 N SER C 59 SHEET 7 AA3 8 SER C 98 THR C 103 -1 N SER C 100 O ALA C 113 SHEET 8 AA3 8 ASP C 136 LYS C 138 1 O LYS C 138 N ILE C 101 CRYST1 64.280 64.280 231.060 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015557 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015557 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004328 0.00000