HEADER TRANSPORT PROTEIN 14-DEC-22 8HQQ TITLE CRYSTAL STRUCTURE OF THE GLUCOSE-BINDING PROTEIN SAR11_0769 FROM TITLE 2 "CANDIDATUS PELAGIBACTER UBIQUE" HTCC1062 BOUND TO GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE BINDING PROTEIN COMPONENT OF ABC SUGAR COMPND 3 TRANSPORTER; COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDATUS PELAGIBACTER UBIQUE HTCC1062; SOURCE 3 ORGANISM_TAXID: 335992; SOURCE 4 GENE: SAR11_0769; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SHUFFLE T7; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28A(+) KEYWDS ABC TRANSPORTER, GLUCOSE TRANSPORTER, PERIPLASMIC BINDING PROTEIN, KEYWDS 2 SOLUTE-BINDING PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.E.CLIFTON,P.LAURINO REVDAT 1 27-DEC-23 8HQQ 0 JRNL AUTH B.E.CLIFTON,P.LAURINO JRNL TITL CRYSTAL STRUCTURE OF THE GLUCOSE-BINDING PROTEIN SAR11_0769 JRNL TITL 2 FROM "CANDIDATUS PELAGIBACTER UBIQUE" HTCC1062 BOUND TO JRNL TITL 3 GLUCOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 33030 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1608 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2543 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.3330 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.3913 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 99 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.270 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -20.8855 8.0377 -15.8174 REMARK 3 T TENSOR REMARK 3 T11: 0.4196 T22: 0.4580 REMARK 3 T33: 0.3825 T12: -0.1249 REMARK 3 T13: 0.1440 T23: -0.0953 REMARK 3 L TENSOR REMARK 3 L11: 0.6730 L22: 0.4788 REMARK 3 L33: 0.1809 L12: -0.4124 REMARK 3 L13: -0.1260 L23: 0.2030 REMARK 3 S TENSOR REMARK 3 S11: 0.1704 S12: -0.1714 S13: 0.3742 REMARK 3 S21: 0.4978 S22: -0.1319 S23: 0.4982 REMARK 3 S31: -0.0909 S32: -0.2614 S33: -0.0397 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -10.1024 17.2134 -16.7316 REMARK 3 T TENSOR REMARK 3 T11: 0.4337 T22: 0.3267 REMARK 3 T33: 0.3301 T12: -0.0786 REMARK 3 T13: 0.1110 T23: -0.0587 REMARK 3 L TENSOR REMARK 3 L11: 1.3607 L22: 1.8404 REMARK 3 L33: 1.7086 L12: 0.2926 REMARK 3 L13: -0.1624 L23: -0.6364 REMARK 3 S TENSOR REMARK 3 S11: 0.2385 S12: -0.2944 S13: 0.4292 REMARK 3 S21: 0.4758 S22: -0.1713 S23: 0.1349 REMARK 3 S31: -0.5424 S32: -0.0282 S33: -0.1300 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -3.4941 4.8033 -6.8018 REMARK 3 T TENSOR REMARK 3 T11: 0.6283 T22: 0.5114 REMARK 3 T33: 0.3104 T12: -0.2282 REMARK 3 T13: -0.0219 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.2762 L22: 1.8061 REMARK 3 L33: 1.6962 L12: -0.3078 REMARK 3 L13: -0.1740 L23: 0.5703 REMARK 3 S TENSOR REMARK 3 S11: 0.3591 S12: -0.5698 S13: 0.0652 REMARK 3 S21: 0.8867 S22: -0.3244 S23: -0.1830 REMARK 3 S31: -0.0152 S32: 0.1068 S33: -0.0902 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -7.4212 -1.4809 -36.5917 REMARK 3 T TENSOR REMARK 3 T11: 0.2625 T22: 0.2415 REMARK 3 T33: 0.2537 T12: -0.0570 REMARK 3 T13: 0.0169 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.7605 L22: 1.0863 REMARK 3 L33: 2.0818 L12: 0.5366 REMARK 3 L13: 0.1461 L23: 0.2177 REMARK 3 S TENSOR REMARK 3 S11: 0.0003 S12: 0.0332 S13: 0.0180 REMARK 3 S21: 0.0506 S22: 0.0883 S23: 0.0160 REMARK 3 S31: 0.0893 S32: 0.0917 S33: -0.0786 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 0.1252 5.7771 -38.3367 REMARK 3 T TENSOR REMARK 3 T11: 0.2473 T22: 0.2772 REMARK 3 T33: 0.2320 T12: -0.0575 REMARK 3 T13: 0.0129 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.6914 L22: 1.1787 REMARK 3 L33: 1.3698 L12: 0.6323 REMARK 3 L13: 0.0644 L23: 0.0571 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: 0.0575 S13: -0.0601 REMARK 3 S21: -0.0209 S22: 0.0508 S23: -0.0250 REMARK 3 S31: 0.0493 S32: 0.1534 S33: -0.0544 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -13.2264 -0.8041 -22.4091 REMARK 3 T TENSOR REMARK 3 T11: 0.3976 T22: 0.2884 REMARK 3 T33: 0.2567 T12: -0.1135 REMARK 3 T13: 0.0561 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 1.5935 L22: 1.3225 REMARK 3 L33: 1.6191 L12: 0.5336 REMARK 3 L13: -0.0556 L23: 0.4372 REMARK 3 S TENSOR REMARK 3 S11: 0.1418 S12: -0.1839 S13: 0.0261 REMARK 3 S21: 0.4143 S22: -0.1444 S23: 0.1347 REMARK 3 S31: 0.1921 S32: -0.2600 S33: 0.0307 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): -1.1477 -3.3761 -25.4221 REMARK 3 T TENSOR REMARK 3 T11: 0.3582 T22: 0.3179 REMARK 3 T33: 0.2564 T12: -0.0780 REMARK 3 T13: -0.0032 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.7458 L22: 1.0287 REMARK 3 L33: 1.0940 L12: 0.0612 REMARK 3 L13: -0.0699 L23: -0.4536 REMARK 3 S TENSOR REMARK 3 S11: 0.0974 S12: 0.1020 S13: -0.1895 REMARK 3 S21: 0.3051 S22: -0.1103 S23: -0.1280 REMARK 3 S31: 0.1386 S32: 0.0248 S33: 0.0145 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 5.7104 15.6540 -37.6393 REMARK 3 T TENSOR REMARK 3 T11: 0.2781 T22: 0.2961 REMARK 3 T33: 0.2593 T12: -0.1282 REMARK 3 T13: 0.0275 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 0.5677 L22: 0.6867 REMARK 3 L33: 1.3155 L12: -0.2118 REMARK 3 L13: 0.5608 L23: 0.3927 REMARK 3 S TENSOR REMARK 3 S11: 0.0922 S12: 0.2321 S13: 0.0708 REMARK 3 S21: -0.0130 S22: 0.0066 S23: 0.0790 REMARK 3 S31: -0.2160 S32: 0.0224 S33: -0.1061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.10 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: INITIAL REFINEMENT BY SIMULATED REMARK 3 ANNEALING IN PHENIX, FOLLOWED BY ITERATIVE REAL-SPACE AND REMARK 3 RECIPROCAL-SPACE REFINEMENT IN COOT AND REFMAC. FINAL ROUNDS OF REMARK 3 RECIPROCAL-SPACE REFINEMENT INCLUDING TLS REFINEMENT WERE REMARK 3 PERFORMED IN PHENIX. REMARK 4 REMARK 4 8HQQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1300034100. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : XDS JAN 10, 2022 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33089 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 47.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.23900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.4 REMARK 200 DATA REDUNDANCY IN SHELL : 9.49 REMARK 200 R MERGE FOR SHELL (I) : 0.52100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: ALPHAFOLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL 12 MG/ML PROTEIN + 1 UL 18.5% REMARK 280 (W/V) PEG 1500, 10% (V/V) ISOPROPANOL, 0.1 M BIS-TRIS PH 6.5. REMARK 280 CRYSTAL WAS CRYOPROTECTED IN 15% (W/V) PEG 1500, 30% (V/V) REMARK 280 ETHYLENE GLYCOL, 10% (V/V) ISOPROPANOL, 0.1 M BIS-TRIS PH 6.5., REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 219.40800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 109.70400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 109.70400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 219.40800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 465 HIS A 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 21 CG SD CE REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 LYS A 152 CG CD CE NZ REMARK 470 LYS A 307 CG CD CE NZ REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 LYS A 311 CG CD CE NZ REMARK 470 LYS A 357 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 401 136.03 -39.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 8HQQ A 22 418 UNP Q4FMK2 Q4FMK2_PELUB 23 419 SEQADV 8HQQ MET A 1 UNP Q4FMK2 INITIATING METHIONINE SEQADV 8HQQ GLY A 2 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ SER A 3 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ SER A 4 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 5 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 6 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 7 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 8 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 9 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 10 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ SER A 11 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ SER A 12 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ GLY A 13 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ LEU A 14 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ VAL A 15 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ PRO A 16 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ ARG A 17 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ GLY A 18 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ SER A 19 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ HIS A 20 UNP Q4FMK2 EXPRESSION TAG SEQADV 8HQQ MET A 21 UNP Q4FMK2 EXPRESSION TAG SEQRES 1 A 418 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 418 LEU VAL PRO ARG GLY SER HIS MET ALA PRO LYS ALA GLU SEQRES 3 A 418 VAL LEU HIS TRP TRP THR GLY GLY GLY GLU ALA LYS ALA SEQRES 4 A 418 LEU LYS VAL LEU GLN ASP GLU PHE ALA ALA GLN ASN GLY SEQRES 5 A 418 VAL TRP LEU ASP MET PRO VAL SER GLY GLY GLY GLY ASP SEQRES 6 A 418 ALA ALA MET GLN THR LEU LYS ALA ARG ILE VAL ALA ASN SEQRES 7 A 418 ASP ALA PRO ALA ALA ALA GLN ILE LYS GLY PRO THR ILE SEQRES 8 A 418 GLN GLU TYR ASP GLU GLU GLY VAL VAL ALA PRO TYR ASN SEQRES 9 A 418 ILE ASP ALA VAL ALA LYS LYS GLU GLY TRP ASP ASN LEU SEQRES 10 A 418 LEU SER LYS GLN VAL ALA SER HIS MET LYS CYS ASP ASP SEQRES 11 A 418 GLY LYS ALA TYR CYS ALA ALA PRO VAL ASN ILE HIS ARG SEQRES 12 A 418 ILE ASP TRP ILE TRP ALA ASN LYS LYS VAL LEU ASP SER SEQRES 13 A 418 ASN GLY ILE LYS MET PRO SER THR TRP ALA GLU PHE ASN SEQRES 14 A 418 ALA ALA ALA ASP LYS LEU GLN ALA ASN GLY ILE ILE PRO SEQRES 15 A 418 LEU ALA HIS GLY SER GLN PRO TRP GLN ASP ALA THR VAL SEQRES 16 A 418 PHE GLU ALA VAL ALA LEU GLY VAL GLY GLY ASN ASP PHE SEQRES 17 A 418 TYR ARG LYS ALA PHE VAL ASP LEU ASP ALA ALA THR LEU SEQRES 18 A 418 GLY GLY SER THR MET THR LYS VAL PHE ASP GLN MET ARG SEQRES 19 A 418 LYS LEU LYS GLY TYR THR ASP ALA GLY SER PRO GLY ARG SEQRES 20 A 418 ASP TRP ASN VAL ALA THR GLY MET VAL MET GLU GLY LYS SEQRES 21 A 418 ALA ALA PHE GLN ILE MET GLY ASP TRP ALA LYS GLY GLU SEQRES 22 A 418 PHE ALA ALA ASN ASN MET ALA PRO GLY LYS ASP TYR ILE SEQRES 23 A 418 CYS ALA PRO THR PRO SER ASN ASN GLY TYR LEU TYR ASN SEQRES 24 A 418 VAL ASP SER PHE ILE PHE TYR LYS VAL LYS GLY LYS ASP SEQRES 25 A 418 LYS VAL GLU GLY GLN LYS LEU LEU ALA SER LEU MET MET SEQRES 26 A 418 GLY LYS ASN PHE GLN LYS VAL PHE ASN ILE TYR LYS GLY SEQRES 27 A 418 SER ILE PRO ALA ARG LEU ASP VAL SER MET ASP GLU PHE SEQRES 28 A 418 ASP MET CYS ALA LYS LYS SER ASN ALA ASP LEU LYS THR SEQRES 29 A 418 ALA GLY SER LYS GLY GLY LEU LEU PRO SER PHE ALA HIS SEQRES 30 A 418 GLY MET ALA LEU ARG LEU ALA GLN LYS GLY ALA ILE GLN SEQRES 31 A 418 ASP VAL VAL THR GLU HIS PHE ASN SER ASN MET SER SER SEQRES 32 A 418 SER ASP ALA ALA LYS LYS LEU ALA ALA ALA VAL LYS ALA SEQRES 33 A 418 SER LEU HET BGC A 501 12 HETNAM BGC BETA-D-GLUCOPYRANOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 BGC C6 H12 O6 FORMUL 3 HOH *99(H2 O) HELIX 1 AA1 GLY A 33 GLN A 50 1 18 HELIX 2 AA2 GLY A 61 GLY A 63 5 3 HELIX 3 AA3 GLY A 64 ALA A 77 1 14 HELIX 4 AA4 GLY A 88 GLU A 97 1 10 HELIX 5 AA5 ILE A 105 GLY A 113 1 9 HELIX 6 AA6 TRP A 114 LEU A 117 5 4 HELIX 7 AA7 SER A 119 MET A 126 1 8 HELIX 8 AA8 LYS A 151 ASN A 157 1 7 HELIX 9 AA9 THR A 164 ASN A 178 1 15 HELIX 10 AB1 GLN A 188 GLY A 205 1 18 HELIX 11 AB2 GLY A 205 VAL A 214 1 10 HELIX 12 AB3 ASP A 217 GLY A 222 1 6 HELIX 13 AB4 GLY A 223 TYR A 239 1 17 HELIX 14 AB5 ASP A 248 GLU A 258 1 11 HELIX 15 AB6 ASP A 268 ASN A 277 1 10 HELIX 16 AB7 GLY A 310 MET A 325 1 16 HELIX 17 AB8 GLY A 326 GLY A 338 1 13 HELIX 18 AB9 ASP A 352 LYS A 368 1 17 HELIX 19 AC1 ARG A 382 ASN A 398 1 17 HELIX 20 AC2 SER A 402 SER A 417 1 16 SHEET 1 AA1 5 VAL A 53 PRO A 58 0 SHEET 2 AA1 5 LYS A 24 HIS A 29 1 N ALA A 25 O LEU A 55 SHEET 3 AA1 5 ALA A 83 ILE A 86 1 O GLN A 85 N LEU A 28 SHEET 4 AA1 5 SER A 302 PHE A 305 -1 O SER A 302 N ILE A 86 SHEET 5 AA1 5 ALA A 136 PRO A 138 -1 N ALA A 137 O PHE A 303 SHEET 1 AA2 2 LYS A 127 CYS A 128 0 SHEET 2 AA2 2 ALA A 133 TYR A 134 -1 O ALA A 133 N CYS A 128 SHEET 1 AA3 4 ILE A 340 PRO A 341 0 SHEET 2 AA3 4 ASN A 140 ARG A 143 -1 N ILE A 141 O ILE A 340 SHEET 3 AA3 4 TYR A 296 ASN A 299 -1 O ASN A 299 N HIS A 142 SHEET 4 AA3 4 LEU A 371 PRO A 373 1 O LEU A 372 N TYR A 296 SHEET 1 AA4 4 ILE A 181 LEU A 183 0 SHEET 2 AA4 4 ALA A 261 ILE A 265 1 O PHE A 263 N PRO A 182 SHEET 3 AA4 4 TRP A 146 ASN A 150 -1 N TRP A 148 O GLN A 264 SHEET 4 AA4 4 TYR A 285 PRO A 289 -1 O ALA A 288 N ILE A 147 SSBOND 1 CYS A 128 CYS A 135 1555 1555 2.04 SSBOND 2 CYS A 287 CYS A 354 1555 1555 2.08 CISPEP 1 ALA A 101 PRO A 102 0 -2.00 CRYST1 44.642 44.642 329.112 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022400 0.012933 0.000000 0.00000 SCALE2 0.000000 0.025866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003038 0.00000