data_8HR4 # _entry.id 8HR4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HR4 pdb_00008hr4 10.2210/pdb8hr4/pdb WWPDB D_1300034162 ? ? BMRB 36530 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details '[D-Cys5,D-Lys16]-STp(5-17)' _pdbx_database_related.db_id 36530 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 8HR4 _pdbx_database_status.recvd_initial_deposition_date 2022-12-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shimamoto, S.' 1 0000-0002-9470-0352 'Hidaka, Y.' 2 0000-0002-3131-2619 'Yoshino, S.' 3 0000-0002-5923-4464 'Goto, M.' 4 0000-0001-7999-130X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The molecular basis of heat-stable enterotoxin for vaccine development and cancer cell detection' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goto, M.' 1 ? primary 'Yoshino, S.' 2 ? primary 'Kawakami, T.' 3 ? primary 'Murota, K.' 4 ? primary 'Shimamoto, S.' 5 0000-0002-9470-0352 primary 'Hidaka, Y.' 6 0000-0002-3131-2619 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description DCY-CYS-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CYS-ALA-DLY-CYS _entity.formula_weight 1360.690 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DCY)CELCCNPACA(DLY)C' _entity_poly.pdbx_seq_one_letter_code_can CCELCCNPACAKC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DCY n 1 2 CYS n 1 3 GLU n 1 4 LEU n 1 5 CYS n 1 6 CYS n 1 7 ASN n 1 8 PRO n 1 9 ALA n 1 10 CYS n 1 11 ALA n 1 12 DLY n 1 13 CYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 13 _pdbx_entity_src_syn.organism_scientific 'Escherichia coli' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 562 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8HR4 _struct_ref.pdbx_db_accession 8HR4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8HR4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8HR4 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 17 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D DQF-COSY' 1 isotropic 2 1 1 '1H-1H NOESY' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 25 _pdbx_nmr_exptl_sample_conditions.details '20 mM sodium phosphate buffer prepared with a 90% H2O/10% D2O mixture at pH 6.5' _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '3 mM NA- c5,k16-STp, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details 'c5k16-STp(5-17)' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model JNM-ECA800 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer JEOL _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 8HR4 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 8HR4 _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 8HR4 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_software.ordinal 1 _pdbx_nmr_software.classification 'structure calculation' _pdbx_nmr_software.name CNS _pdbx_nmr_software.version ? _pdbx_nmr_software.authors 'Brunger, Adams, Clore, Gros, Nilges and Read' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HR4 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 8HR4 _struct.title '[D-Cys5,D-Lys16]-STp(5-17)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HR4 _struct_keywords.text 'Heat-stable enterotoxin, D-amino acid, topological isomer, STp, STp(5-17), TOXIN' _struct_keywords.pdbx_keywords TOXIN # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A DCY 1 SG ? ? ? 1_555 A CYS 6 SG ? ? A DCY 5 A CYS 10 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 10 SG ? ? A CYS 6 A CYS 14 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 13 SG ? ? A CYS 9 A CYS 17 1_555 ? ? ? ? ? ? ? 2.030 ? ? covale1 covale both ? A DCY 1 C ? ? ? 1_555 A CYS 2 N ? ? A DCY 5 A CYS 6 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? A ALA 11 C ? ? ? 1_555 A DLY 12 N ? ? A ALA 15 A DLY 16 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A DLY 12 C ? ? ? 1_555 A CYS 13 N ? ? A DLY 16 A CYS 17 1_555 ? ? ? ? ? ? ? 1.339 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _atom_sites.entry_id 8HR4 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DCY 1 5 5 DCY DCY A . n A 1 2 CYS 2 6 6 CYS CYS A . n A 1 3 GLU 3 7 7 GLU GLU A . n A 1 4 LEU 4 8 8 LEU LEU A . n A 1 5 CYS 5 9 9 CYS CYS A . n A 1 6 CYS 6 10 10 CYS CYS A . n A 1 7 ASN 7 11 11 ASN ASN A . n A 1 8 PRO 8 12 12 PRO PRO A . n A 1 9 ALA 9 13 13 ALA ALA A . n A 1 10 CYS 10 14 14 CYS CYS A . n A 1 11 ALA 11 15 15 ALA ALA A . n A 1 12 DLY 12 16 16 DLY DLY A . n A 1 13 CYS 13 17 17 CYS CYS A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 3 sh1nya.4sh1no@gmail.com Shinya Yoshino ? 'principal investigator/group leader' 0000-0002-5923-4464 4 tf.rongu.800@gmail.com Masaya Goto ? 'principal investigator/group leader' 0000-0001-7999-130X # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_entry_details.entry_id 8HR4 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details 'The side chain of DLY(D-Lys)16 were protonated' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_nmr_exptl_sample.solution_id 1 _pdbx_nmr_exptl_sample.component c5,k16-STp _pdbx_nmr_exptl_sample.concentration 3 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling NA- # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 7 ? ? -154.00 -43.15 2 1 LEU A 8 ? ? -136.96 -36.50 3 1 CYS A 10 ? ? -113.84 65.34 4 1 CYS A 14 ? ? 58.22 97.19 5 2 CYS A 6 ? ? -96.09 -60.62 6 2 GLU A 7 ? ? -153.89 -42.91 7 2 LEU A 8 ? ? -136.97 -36.52 8 2 CYS A 10 ? ? -116.26 65.62 9 2 CYS A 14 ? ? 59.90 96.18 10 3 CYS A 6 ? ? -96.12 -60.40 11 3 GLU A 7 ? ? -153.90 -43.08 12 3 LEU A 8 ? ? -136.96 -36.34 13 3 CYS A 10 ? ? -119.16 64.79 14 3 CYS A 14 ? ? 58.94 95.93 15 4 CYS A 6 ? ? -98.33 -62.33 16 4 GLU A 7 ? ? -154.08 -43.15 17 4 LEU A 8 ? ? -138.50 -36.39 18 4 CYS A 10 ? ? -118.00 65.34 19 4 CYS A 14 ? ? 59.95 96.78 20 5 CYS A 6 ? ? -96.17 -60.30 21 5 GLU A 7 ? ? -154.15 -43.18 22 5 LEU A 8 ? ? -136.82 -36.30 23 5 CYS A 10 ? ? -118.09 65.16 24 5 CYS A 14 ? ? 59.23 96.09 25 6 CYS A 6 ? ? -96.34 -60.33 26 6 GLU A 7 ? ? -154.15 -42.83 27 6 LEU A 8 ? ? -137.16 -36.34 28 6 CYS A 10 ? ? -118.49 65.11 29 6 CYS A 14 ? ? 59.40 95.95 30 7 CYS A 6 ? ? -98.26 -61.26 31 7 GLU A 7 ? ? -154.17 -42.95 32 7 LEU A 8 ? ? -139.15 -36.37 33 7 CYS A 10 ? ? -118.96 65.12 34 7 CYS A 14 ? ? 60.16 96.73 35 8 CYS A 6 ? ? -98.10 -61.64 36 8 GLU A 7 ? ? -154.12 -43.24 37 8 LEU A 8 ? ? -138.85 -36.30 38 8 CYS A 10 ? ? -118.43 65.20 39 8 CYS A 14 ? ? 60.23 96.89 40 9 CYS A 6 ? ? -96.19 -60.48 41 9 GLU A 7 ? ? -153.83 -42.73 42 9 LEU A 8 ? ? -137.38 -36.61 43 9 CYS A 10 ? ? -117.58 65.15 44 9 CYS A 14 ? ? 59.51 96.05 45 10 CYS A 6 ? ? -97.94 -61.83 46 10 GLU A 7 ? ? -154.33 -43.15 47 10 LEU A 8 ? ? -138.80 -36.40 48 10 CYS A 10 ? ? -116.23 65.64 49 10 CYS A 14 ? ? 58.65 98.91 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 CYS N N N N 31 CYS CA C N R 32 CYS C C N N 33 CYS O O N N 34 CYS CB C N N 35 CYS SG S N N 36 CYS OXT O N N 37 CYS H H N N 38 CYS H2 H N N 39 CYS HA H N N 40 CYS HB2 H N N 41 CYS HB3 H N N 42 CYS HG H N N 43 CYS HXT H N N 44 DCY N N N N 45 DCY CA C N S 46 DCY C C N N 47 DCY O O N N 48 DCY CB C N N 49 DCY SG S N N 50 DCY OXT O N N 51 DCY H H N N 52 DCY H2 H N N 53 DCY HA H N N 54 DCY HB2 H N N 55 DCY HB3 H N N 56 DCY HG H N N 57 DCY HXT H N N 58 DLY N N N N 59 DLY CA C N R 60 DLY C C N N 61 DLY O O N N 62 DLY CB C N N 63 DLY CG C N N 64 DLY CD C N N 65 DLY CE C N N 66 DLY NZ N N N 67 DLY OXT O N N 68 DLY H H N N 69 DLY H2 H N N 70 DLY HA H N N 71 DLY HB2 H N N 72 DLY HB3 H N N 73 DLY HG2 H N N 74 DLY HG3 H N N 75 DLY HD2 H N N 76 DLY HD3 H N N 77 DLY HE2 H N N 78 DLY HE3 H N N 79 DLY HZ1 H N N 80 DLY HZ2 H N N 81 DLY HXT H N N 82 GLU N N N N 83 GLU CA C N S 84 GLU C C N N 85 GLU O O N N 86 GLU CB C N N 87 GLU CG C N N 88 GLU CD C N N 89 GLU OE1 O N N 90 GLU OE2 O N N 91 GLU OXT O N N 92 GLU H H N N 93 GLU H2 H N N 94 GLU HA H N N 95 GLU HB2 H N N 96 GLU HB3 H N N 97 GLU HG2 H N N 98 GLU HG3 H N N 99 GLU HE2 H N N 100 GLU HXT H N N 101 LEU N N N N 102 LEU CA C N S 103 LEU C C N N 104 LEU O O N N 105 LEU CB C N N 106 LEU CG C N N 107 LEU CD1 C N N 108 LEU CD2 C N N 109 LEU OXT O N N 110 LEU H H N N 111 LEU H2 H N N 112 LEU HA H N N 113 LEU HB2 H N N 114 LEU HB3 H N N 115 LEU HG H N N 116 LEU HD11 H N N 117 LEU HD12 H N N 118 LEU HD13 H N N 119 LEU HD21 H N N 120 LEU HD22 H N N 121 LEU HD23 H N N 122 LEU HXT H N N 123 PRO N N N N 124 PRO CA C N S 125 PRO C C N N 126 PRO O O N N 127 PRO CB C N N 128 PRO CG C N N 129 PRO CD C N N 130 PRO OXT O N N 131 PRO H H N N 132 PRO HA H N N 133 PRO HB2 H N N 134 PRO HB3 H N N 135 PRO HG2 H N N 136 PRO HG3 H N N 137 PRO HD2 H N N 138 PRO HD3 H N N 139 PRO HXT H N N 140 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 CYS N CA sing N N 29 CYS N H sing N N 30 CYS N H2 sing N N 31 CYS CA C sing N N 32 CYS CA CB sing N N 33 CYS CA HA sing N N 34 CYS C O doub N N 35 CYS C OXT sing N N 36 CYS CB SG sing N N 37 CYS CB HB2 sing N N 38 CYS CB HB3 sing N N 39 CYS SG HG sing N N 40 CYS OXT HXT sing N N 41 DCY N CA sing N N 42 DCY N H sing N N 43 DCY N H2 sing N N 44 DCY CA C sing N N 45 DCY CA CB sing N N 46 DCY CA HA sing N N 47 DCY C O doub N N 48 DCY C OXT sing N N 49 DCY CB SG sing N N 50 DCY CB HB2 sing N N 51 DCY CB HB3 sing N N 52 DCY SG HG sing N N 53 DCY OXT HXT sing N N 54 DLY N CA sing N N 55 DLY N H sing N N 56 DLY N H2 sing N N 57 DLY CA C sing N N 58 DLY CA CB sing N N 59 DLY CA HA sing N N 60 DLY C O doub N N 61 DLY C OXT sing N N 62 DLY CB CG sing N N 63 DLY CB HB2 sing N N 64 DLY CB HB3 sing N N 65 DLY CG CD sing N N 66 DLY CG HG2 sing N N 67 DLY CG HG3 sing N N 68 DLY CD CE sing N N 69 DLY CD HD2 sing N N 70 DLY CD HD3 sing N N 71 DLY CE NZ sing N N 72 DLY CE HE2 sing N N 73 DLY CE HE3 sing N N 74 DLY NZ HZ1 sing N N 75 DLY NZ HZ2 sing N N 76 DLY OXT HXT sing N N 77 GLU N CA sing N N 78 GLU N H sing N N 79 GLU N H2 sing N N 80 GLU CA C sing N N 81 GLU CA CB sing N N 82 GLU CA HA sing N N 83 GLU C O doub N N 84 GLU C OXT sing N N 85 GLU CB CG sing N N 86 GLU CB HB2 sing N N 87 GLU CB HB3 sing N N 88 GLU CG CD sing N N 89 GLU CG HG2 sing N N 90 GLU CG HG3 sing N N 91 GLU CD OE1 doub N N 92 GLU CD OE2 sing N N 93 GLU OE2 HE2 sing N N 94 GLU OXT HXT sing N N 95 LEU N CA sing N N 96 LEU N H sing N N 97 LEU N H2 sing N N 98 LEU CA C sing N N 99 LEU CA CB sing N N 100 LEU CA HA sing N N 101 LEU C O doub N N 102 LEU C OXT sing N N 103 LEU CB CG sing N N 104 LEU CB HB2 sing N N 105 LEU CB HB3 sing N N 106 LEU CG CD1 sing N N 107 LEU CG CD2 sing N N 108 LEU CG HG sing N N 109 LEU CD1 HD11 sing N N 110 LEU CD1 HD12 sing N N 111 LEU CD1 HD13 sing N N 112 LEU CD2 HD21 sing N N 113 LEU CD2 HD22 sing N N 114 LEU CD2 HD23 sing N N 115 LEU OXT HXT sing N N 116 PRO N CA sing N N 117 PRO N CD sing N N 118 PRO N H sing N N 119 PRO CA C sing N N 120 PRO CA CB sing N N 121 PRO CA HA sing N N 122 PRO C O doub N N 123 PRO C OXT sing N N 124 PRO CB CG sing N N 125 PRO CB HB2 sing N N 126 PRO CB HB3 sing N N 127 PRO CG CD sing N N 128 PRO CG HG2 sing N N 129 PRO CG HG3 sing N N 130 PRO CD HD2 sing N N 131 PRO CD HD3 sing N N 132 PRO OXT HXT sing N N 133 # _pdbx_audit_support.funding_organization 'Japan Society for the Promotion of Science (JSPS)' _pdbx_audit_support.country Japan _pdbx_audit_support.grant_number 16K01925 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id DLY _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id DLY _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'NMR Distance Restraints' ? 2 1 'mass spectrometry' ? #