HEADER OXIDOREDUCTASE 14-DEC-22 8HR6 TITLE LEUCINE DEHYDROGENASE STRUCTURE IN TERNARY COMPLEX WITH NAD+ FROM TITLE 2 BACILLUS THURINGIENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCINE DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LEUCINE DEHYDROGENASE LDH; COMPND 5 EC: 1.4.1.9; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS THURINGIENSIS; SOURCE 3 ORGANISM_TAXID: 1428; SOURCE 4 GENE: LDH1, BK774_17255, BK775_32270, BTGOE4_46100, BUM91_06765, SOURCE 5 C5676_00473, D7J84_18335, GH851_02505, GH891_02550; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LEUCINE DEHYDROGENASE STRUCTURE IN TERNARY COMPLEX WITH NAD+ FROM KEYWDS 2 BACILLUS THURINGIENSIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR X.LI,W.SONG REVDAT 1 20-MAR-24 8HR6 0 JRNL AUTH X.LI,C.GAO,W.WEI,W.SONG,W.MENG,J.LIU,X.CHEN,C.GAO,L.GUO, JRNL AUTH 2 L.LIU,J.WU JRNL TITL A TRI-ENZYME CASCADE FOR EFFICIENT PRODUCTION OF JRNL TITL 2 L-2-AMINOBUTYRATE FROM L-THREONINE. JRNL REF CHEMBIOCHEM V. 24 00148 2023 JRNL REFN ESSN 1439-7633 JRNL PMID 36946691 JRNL DOI 10.1002/CBIC.202300148 REMARK 2 REMARK 2 RESOLUTION. 3.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 16295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 860 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.53 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1164 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.48 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 64 REMARK 3 BIN FREE R VALUE : 0.4300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5470 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 143 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.39000 REMARK 3 B22 (A**2) : 1.39000 REMARK 3 B33 (A**2) : -2.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.587 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.434 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 63.832 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5691 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5343 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7719 ; 1.380 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12293 ; 1.124 ; 1.584 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 710 ; 7.019 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 291 ;35.150 ;22.784 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 951 ;17.752 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;17.431 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 772 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6449 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1229 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2854 ; 1.703 ; 4.829 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2853 ; 1.703 ; 4.829 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3559 ; 3.014 ; 7.236 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3560 ; 3.014 ; 7.237 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2836 ; 1.425 ; 5.282 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2793 ; 1.373 ; 5.152 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4094 ; 2.535 ; 7.688 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6176 ; 8.278 ;58.055 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6175 ; 8.199 ;58.053 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A B 10851 0.10 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 9.8662 31.1947 38.2522 REMARK 3 T TENSOR REMARK 3 T11: 0.4065 T22: 0.3138 REMARK 3 T33: 0.2713 T12: 0.0551 REMARK 3 T13: 0.0295 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 2.0675 L22: 1.3402 REMARK 3 L33: 0.7683 L12: 0.0622 REMARK 3 L13: 0.4366 L23: 0.1525 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: 0.1073 S13: -0.2348 REMARK 3 S21: -0.0342 S22: -0.0070 S23: -0.0962 REMARK 3 S31: 0.0958 S32: 0.0044 S33: 0.0187 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 263 REMARK 3 ORIGIN FOR THE GROUP (A): 22.4880 31.9452 12.1118 REMARK 3 T TENSOR REMARK 3 T11: 0.3291 T22: 0.4384 REMARK 3 T33: 0.2477 T12: 0.0833 REMARK 3 T13: 0.1687 T23: -0.0729 REMARK 3 L TENSOR REMARK 3 L11: 0.1480 L22: 0.2865 REMARK 3 L33: 4.1232 L12: -0.1964 REMARK 3 L13: -0.6611 L23: 1.0420 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.1565 S13: 0.0092 REMARK 3 S21: 0.0282 S22: -0.1551 S23: 0.0271 REMARK 3 S31: 0.1978 S32: -0.2433 S33: 0.1212 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 264 A 284 REMARK 3 ORIGIN FOR THE GROUP (A): 34.2963 25.8448 23.7631 REMARK 3 T TENSOR REMARK 3 T11: 0.2730 T22: 0.3806 REMARK 3 T33: 0.1576 T12: 0.1225 REMARK 3 T13: 0.0688 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 7.8399 L22: 6.3314 REMARK 3 L33: 4.3324 L12: 1.5594 REMARK 3 L13: -2.6951 L23: -0.2787 REMARK 3 S TENSOR REMARK 3 S11: -0.0043 S12: -0.4256 S13: 0.0135 REMARK 3 S21: -0.0237 S22: -0.1065 S23: -0.5929 REMARK 3 S31: 0.5614 S32: -0.0439 S33: 0.1108 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 285 A 365 REMARK 3 ORIGIN FOR THE GROUP (A): 24.6909 45.1762 30.8438 REMARK 3 T TENSOR REMARK 3 T11: 0.4155 T22: 0.3503 REMARK 3 T33: 0.3264 T12: 0.0427 REMARK 3 T13: 0.0564 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.3012 L22: 0.7016 REMARK 3 L33: 2.4789 L12: -0.9542 REMARK 3 L13: -1.7267 L23: 1.2841 REMARK 3 S TENSOR REMARK 3 S11: 0.0126 S12: -0.0815 S13: -0.0320 REMARK 3 S21: -0.0339 S22: 0.0673 S23: 0.0154 REMARK 3 S31: -0.2506 S32: 0.2041 S33: -0.0799 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 168 REMARK 3 ORIGIN FOR THE GROUP (A): 7.0135 31.4703 62.5529 REMARK 3 T TENSOR REMARK 3 T11: 0.4182 T22: 0.3739 REMARK 3 T33: 0.2578 T12: 0.0278 REMARK 3 T13: 0.0091 T23: 0.0747 REMARK 3 L TENSOR REMARK 3 L11: 1.8908 L22: 1.8488 REMARK 3 L33: 0.3368 L12: -1.3281 REMARK 3 L13: -0.0770 L23: -0.4955 REMARK 3 S TENSOR REMARK 3 S11: -0.2096 S12: -0.1368 S13: -0.1807 REMARK 3 S21: 0.1748 S22: 0.1648 S23: 0.0159 REMARK 3 S31: -0.0117 S32: -0.0231 S33: 0.0448 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 169 B 197 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1731 26.8495 89.2157 REMARK 3 T TENSOR REMARK 3 T11: 0.6103 T22: 0.5263 REMARK 3 T33: 0.0847 T12: 0.3921 REMARK 3 T13: 0.1015 T23: 0.1968 REMARK 3 L TENSOR REMARK 3 L11: 1.3797 L22: 5.7860 REMARK 3 L33: 0.5262 L12: 2.8185 REMARK 3 L13: 0.1265 L23: 0.1703 REMARK 3 S TENSOR REMARK 3 S11: 0.2143 S12: -0.1471 S13: -0.1700 REMARK 3 S21: 0.5654 S22: -0.2137 S23: -0.3210 REMARK 3 S31: -0.3544 S32: -0.0422 S33: -0.0006 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 198 B 218 REMARK 3 ORIGIN FOR THE GROUP (A): 5.6372 23.8353 93.7163 REMARK 3 T TENSOR REMARK 3 T11: 0.4933 T22: 0.5916 REMARK 3 T33: 0.3872 T12: 0.0611 REMARK 3 T13: -0.1024 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 2.4692 L22: 0.1019 REMARK 3 L33: 0.8393 L12: 0.1891 REMARK 3 L13: 1.3338 L23: 0.0470 REMARK 3 S TENSOR REMARK 3 S11: 0.2612 S12: -0.1485 S13: 0.2626 REMARK 3 S21: -0.0019 S22: -0.2351 S23: 0.0470 REMARK 3 S31: 0.2993 S32: 0.0438 S33: -0.0261 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 219 B 277 REMARK 3 ORIGIN FOR THE GROUP (A): -2.5250 13.6907 81.2392 REMARK 3 T TENSOR REMARK 3 T11: 0.2685 T22: 1.0205 REMARK 3 T33: 0.4689 T12: 0.2758 REMARK 3 T13: 0.3413 T23: 0.3071 REMARK 3 L TENSOR REMARK 3 L11: 7.4564 L22: 4.5806 REMARK 3 L33: 3.0389 L12: 0.1162 REMARK 3 L13: 4.5021 L23: -1.1162 REMARK 3 S TENSOR REMARK 3 S11: -1.1074 S12: 0.0880 S13: -1.3478 REMARK 3 S21: 0.3865 S22: 1.9191 S23: 0.2276 REMARK 3 S31: -0.7524 S32: -0.3854 S33: -0.8117 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 278 B 328 REMARK 3 ORIGIN FOR THE GROUP (A): -9.3977 31.8302 74.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.3478 T22: 0.4143 REMARK 3 T33: 0.3163 T12: 0.0709 REMARK 3 T13: 0.1015 T23: 0.2684 REMARK 3 L TENSOR REMARK 3 L11: 2.6754 L22: 7.7705 REMARK 3 L33: 0.3339 L12: 1.4880 REMARK 3 L13: -0.8058 L23: -0.8510 REMARK 3 S TENSOR REMARK 3 S11: -0.6286 S12: -0.2239 S13: -0.0439 REMARK 3 S21: 0.0036 S22: 0.7651 S23: 0.0019 REMARK 3 S31: 0.0913 S32: -0.0768 S33: -0.1365 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 329 B 365 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6602 33.5272 58.8197 REMARK 3 T TENSOR REMARK 3 T11: 0.6332 T22: 0.3403 REMARK 3 T33: 0.3239 T12: -0.0350 REMARK 3 T13: 0.0427 T23: 0.0929 REMARK 3 L TENSOR REMARK 3 L11: 1.4354 L22: 0.7744 REMARK 3 L33: 2.1649 L12: -0.8728 REMARK 3 L13: 1.4673 L23: -1.2646 REMARK 3 S TENSOR REMARK 3 S11: 0.0760 S12: -0.4325 S13: -0.0724 REMARK 3 S21: -0.4217 S22: 0.2482 S23: 0.1015 REMARK 3 S31: 0.5709 S32: -0.4078 S33: -0.3242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8HR6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1300034143. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17215 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.520 REMARK 200 RESOLUTION RANGE LOW (A) : 30.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% GLYCEROL, 3.75% ISOPROPANOL, 1.5M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z REMARK 290 4555 Y+1/2,-X+1/2,Z REMARK 290 5555 -X+1/2,Y+1/2,-Z REMARK 290 6555 X+1/2,-Y+1/2,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 60.71700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.71700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.71700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 60.71700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.71700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.71700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 60.71700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.71700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -157.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LEU A 3 REMARK 465 PHE A 142 REMARK 465 GLY A 143 REMARK 465 SER A 144 REMARK 465 ARG A 366 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 141 REMARK 465 PHE B 142 REMARK 465 GLY B 143 REMARK 465 SER B 144 REMARK 465 SER B 145 REMARK 465 GLY B 146 REMARK 465 ASN B 147 REMARK 465 ARG B 366 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O VAL B 168 O VAL B 168 8556 0.92 REMARK 500 OE2 GLU B 232 O LEU B 253 8556 1.99 REMARK 500 C VAL B 168 O VAL B 168 8556 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 77 65.46 -104.11 REMARK 500 ASP A 123 -36.26 -38.18 REMARK 500 VAL A 183 60.72 -114.43 REMARK 500 ILE A 228 -19.28 -45.85 REMARK 500 ALA A 240 -67.27 -133.74 REMARK 500 ALA A 259 111.06 -166.46 REMARK 500 ASN A 358 44.91 -109.27 REMARK 500 ASN B 77 65.83 -102.90 REMARK 500 ASP B 123 -36.58 -38.11 REMARK 500 VAL B 183 60.14 -116.49 REMARK 500 ASN B 226 40.53 -94.86 REMARK 500 ILE B 228 -19.94 -47.17 REMARK 500 ALA B 240 -64.75 -135.58 REMARK 500 ALA B 259 111.08 -165.45 REMARK 500 ASP B 285 -70.88 -33.17 REMARK 500 GLU B 306 -71.11 -53.79 REMARK 500 ASN B 358 47.46 -108.60 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8HR6 A 1 366 UNP A0A0G3E5D9_BACTU DBREF2 8HR6 A A0A0G3E5D9 1 366 DBREF1 8HR6 B 1 366 UNP A0A0G3E5D9_BACTU DBREF2 8HR6 B A0A0G3E5D9 1 366 SEQADV 8HR6 VAL A 168 UNP A0A0G3E5D PHE 168 CONFLICT SEQADV 8HR6 VAL B 168 UNP A0A0G3E5D PHE 168 CONFLICT SEQRES 1 A 366 MET THR LEU GLU ILE PHE GLU TYR LEU GLU LYS TYR ASP SEQRES 2 A 366 TYR GLU GLN VAL VAL PHE CYS GLN ASP LYS GLU SER GLY SEQRES 3 A 366 LEU LYS ALA ILE ILE ALA ILE HIS ASP THR THR LEU GLY SEQRES 4 A 366 PRO ALA LEU GLY GLY THR ARG MET TRP THR TYR ASP SER SEQRES 5 A 366 GLU GLU ALA ALA ILE GLU ASP ALA LEU ARG LEU ALA LYS SEQRES 6 A 366 GLY MET THR TYR LYS ASN ALA ALA ALA GLY LEU ASN LEU SEQRES 7 A 366 GLY GLY ALA LYS THR VAL ILE ILE GLY ASP PRO ARG LYS SEQRES 8 A 366 ASP LYS SER GLU ALA MET PHE ARG ALA LEU GLY ARG TYR SEQRES 9 A 366 ILE GLN GLY LEU ASN GLY ARG TYR ILE THR ALA GLU ASP SEQRES 10 A 366 VAL GLY THR THR VAL ASP ASP MET ASP ILE ILE HIS GLU SEQRES 11 A 366 GLU THR ASP PHE VAL THR GLY ILE SER PRO SER PHE GLY SEQRES 12 A 366 SER SER GLY ASN PRO SER PRO VAL THR ALA TYR GLY VAL SEQRES 13 A 366 TYR ARG GLY MET LYS ALA ALA ALA LYS GLU ALA VAL GLY SEQRES 14 A 366 THR ASP ASN LEU GLU GLY LYS VAL ILE ALA VAL GLN GLY SEQRES 15 A 366 VAL GLY ASN VAL ALA TYR HIS LEU CYS LYS HIS LEU HIS SEQRES 16 A 366 ALA GLU GLY ALA LYS LEU ILE VAL THR ASP ILE ASN LYS SEQRES 17 A 366 GLU ALA VAL GLN ARG ALA VAL GLU GLU PHE GLY ALA SER SEQRES 18 A 366 ALA VAL GLU PRO ASN GLU ILE TYR GLY VAL GLU CYS ASP SEQRES 19 A 366 ILE TYR ALA PRO CYS ALA LEU GLY ALA THR VAL ASN ASP SEQRES 20 A 366 GLU THR ILE PRO GLN LEU LYS ALA LYS VAL ILE ALA GLY SEQRES 21 A 366 SER ALA ASN ASN GLN LEU LYS GLU ASN ARG HIS GLY ASP SEQRES 22 A 366 ILE ILE HIS GLU MET GLY ILE VAL TYR ALA PRO ASP TYR SEQRES 23 A 366 VAL ILE ASN ALA GLY GLY VAL ILE ASN VAL ALA ASP GLU SEQRES 24 A 366 LEU TYR GLY TYR ASN ARG GLU ARG ALA LEU LYS ARG VAL SEQRES 25 A 366 GLU SER ILE TYR ASP THR ILE ALA LYS VAL ILE GLU ILE SEQRES 26 A 366 SER LYS ARG ASP GLY ILE ALA THR TYR VAL ALA ALA ASP SEQRES 27 A 366 ARG LEU ALA GLU GLU ARG ILE ALA SER LEU LYS ASN SER SEQRES 28 A 366 ARG SER THR TYR LEU ARG ASN GLY HIS ASP ILE ILE SER SEQRES 29 A 366 ARG ARG SEQRES 1 B 366 MET THR LEU GLU ILE PHE GLU TYR LEU GLU LYS TYR ASP SEQRES 2 B 366 TYR GLU GLN VAL VAL PHE CYS GLN ASP LYS GLU SER GLY SEQRES 3 B 366 LEU LYS ALA ILE ILE ALA ILE HIS ASP THR THR LEU GLY SEQRES 4 B 366 PRO ALA LEU GLY GLY THR ARG MET TRP THR TYR ASP SER SEQRES 5 B 366 GLU GLU ALA ALA ILE GLU ASP ALA LEU ARG LEU ALA LYS SEQRES 6 B 366 GLY MET THR TYR LYS ASN ALA ALA ALA GLY LEU ASN LEU SEQRES 7 B 366 GLY GLY ALA LYS THR VAL ILE ILE GLY ASP PRO ARG LYS SEQRES 8 B 366 ASP LYS SER GLU ALA MET PHE ARG ALA LEU GLY ARG TYR SEQRES 9 B 366 ILE GLN GLY LEU ASN GLY ARG TYR ILE THR ALA GLU ASP SEQRES 10 B 366 VAL GLY THR THR VAL ASP ASP MET ASP ILE ILE HIS GLU SEQRES 11 B 366 GLU THR ASP PHE VAL THR GLY ILE SER PRO SER PHE GLY SEQRES 12 B 366 SER SER GLY ASN PRO SER PRO VAL THR ALA TYR GLY VAL SEQRES 13 B 366 TYR ARG GLY MET LYS ALA ALA ALA LYS GLU ALA VAL GLY SEQRES 14 B 366 THR ASP ASN LEU GLU GLY LYS VAL ILE ALA VAL GLN GLY SEQRES 15 B 366 VAL GLY ASN VAL ALA TYR HIS LEU CYS LYS HIS LEU HIS SEQRES 16 B 366 ALA GLU GLY ALA LYS LEU ILE VAL THR ASP ILE ASN LYS SEQRES 17 B 366 GLU ALA VAL GLN ARG ALA VAL GLU GLU PHE GLY ALA SER SEQRES 18 B 366 ALA VAL GLU PRO ASN GLU ILE TYR GLY VAL GLU CYS ASP SEQRES 19 B 366 ILE TYR ALA PRO CYS ALA LEU GLY ALA THR VAL ASN ASP SEQRES 20 B 366 GLU THR ILE PRO GLN LEU LYS ALA LYS VAL ILE ALA GLY SEQRES 21 B 366 SER ALA ASN ASN GLN LEU LYS GLU ASN ARG HIS GLY ASP SEQRES 22 B 366 ILE ILE HIS GLU MET GLY ILE VAL TYR ALA PRO ASP TYR SEQRES 23 B 366 VAL ILE ASN ALA GLY GLY VAL ILE ASN VAL ALA ASP GLU SEQRES 24 B 366 LEU TYR GLY TYR ASN ARG GLU ARG ALA LEU LYS ARG VAL SEQRES 25 B 366 GLU SER ILE TYR ASP THR ILE ALA LYS VAL ILE GLU ILE SEQRES 26 B 366 SER LYS ARG ASP GLY ILE ALA THR TYR VAL ALA ALA ASP SEQRES 27 B 366 ARG LEU ALA GLU GLU ARG ILE ALA SER LEU LYS ASN SER SEQRES 28 B 366 ARG SER THR TYR LEU ARG ASN GLY HIS ASP ILE ILE SER SEQRES 29 B 366 ARG ARG HET NAD A 401 44 HET SO4 A 402 5 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET NAD B 401 44 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM SO4 SULFATE ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 SO4 11(O4 S 2-) FORMUL 16 HOH *3(H2 O) HELIX 1 AA1 GLU A 4 TYR A 12 1 9 HELIX 2 AA2 SER A 52 ALA A 74 1 23 HELIX 3 AA3 SER A 94 GLY A 107 1 14 HELIX 4 AA4 THR A 121 HIS A 129 1 9 HELIX 5 AA5 PRO A 148 VAL A 168 1 21 HELIX 6 AA6 GLY A 184 ALA A 196 1 13 HELIX 7 AA7 ASN A 207 GLY A 219 1 13 HELIX 8 AA8 GLU A 224 ILE A 228 5 5 HELIX 9 AA9 GLU A 268 MET A 278 1 11 HELIX 10 AB1 PRO A 284 ASN A 289 1 6 HELIX 11 AB2 ALA A 290 TYR A 303 1 14 HELIX 12 AB3 ASN A 304 SER A 314 1 11 HELIX 13 AB4 SER A 314 ASP A 329 1 16 HELIX 14 AB5 ALA A 332 ARG A 352 1 21 HELIX 15 AB6 ASP A 361 ARG A 365 5 5 HELIX 16 AB7 GLU B 4 TYR B 12 1 9 HELIX 17 AB8 SER B 52 ALA B 74 1 23 HELIX 18 AB9 SER B 94 GLY B 107 1 14 HELIX 19 AC1 THR B 121 HIS B 129 1 9 HELIX 20 AC2 SER B 149 GLY B 169 1 21 HELIX 21 AC3 GLY B 184 ALA B 196 1 13 HELIX 22 AC4 ASN B 207 PHE B 218 1 12 HELIX 23 AC5 GLU B 224 ILE B 228 5 5 HELIX 24 AC6 GLU B 268 MET B 278 1 11 HELIX 25 AC7 PRO B 284 ASN B 289 1 6 HELIX 26 AC8 ALA B 290 TYR B 303 1 14 HELIX 27 AC9 ASN B 304 SER B 314 1 11 HELIX 28 AD1 SER B 314 ASP B 329 1 16 HELIX 29 AD2 ALA B 332 ARG B 352 1 21 HELIX 30 AD3 ASP B 361 ARG B 365 5 5 SHEET 1 AA1 8 THR A 45 TRP A 48 0 SHEET 2 AA1 8 GLY A 79 ILE A 86 1 O THR A 83 N ARG A 46 SHEET 3 AA1 8 LEU A 27 ASP A 35 -1 N LYS A 28 O ILE A 86 SHEET 4 AA1 8 GLN A 16 ASP A 22 -1 N VAL A 18 O ILE A 31 SHEET 5 AA1 8 GLN B 16 ASP B 22 -1 O VAL B 17 N PHE A 19 SHEET 6 AA1 8 LEU B 27 ASP B 35 -1 O ILE B 31 N VAL B 18 SHEET 7 AA1 8 GLY B 79 ILE B 86 -1 O ILE B 86 N LYS B 28 SHEET 8 AA1 8 THR B 45 TRP B 48 1 N ARG B 46 O THR B 83 SHEET 1 AA210 TYR A 112 ILE A 113 0 SHEET 2 AA210 ALA A 41 LEU A 42 1 N ALA A 41 O ILE A 113 SHEET 3 AA210 GLY A 79 ILE A 86 1 O GLY A 79 N LEU A 42 SHEET 4 AA210 LEU A 27 ASP A 35 -1 N LYS A 28 O ILE A 86 SHEET 5 AA210 GLN A 16 ASP A 22 -1 N VAL A 18 O ILE A 31 SHEET 6 AA210 GLN B 16 ASP B 22 -1 O VAL B 17 N PHE A 19 SHEET 7 AA210 LEU B 27 ASP B 35 -1 O ILE B 31 N VAL B 18 SHEET 8 AA210 GLY B 79 ILE B 86 -1 O ILE B 86 N LYS B 28 SHEET 9 AA210 ALA B 41 LEU B 42 1 N LEU B 42 O GLY B 79 SHEET 10 AA210 TYR B 112 ILE B 113 1 O ILE B 113 N ALA B 41 SHEET 1 AA3 6 SER A 221 ALA A 222 0 SHEET 2 AA3 6 LYS A 200 THR A 204 1 N VAL A 203 O SER A 221 SHEET 3 AA3 6 VAL A 177 GLN A 181 1 N ILE A 178 O LYS A 200 SHEET 4 AA3 6 ILE A 235 PRO A 238 1 O ALA A 237 N ALA A 179 SHEET 5 AA3 6 VAL A 257 ILE A 258 1 O VAL A 257 N TYR A 236 SHEET 6 AA3 6 VAL A 281 TYR A 282 1 O VAL A 281 N ILE A 258 SHEET 1 AA4 4 SER B 221 ALA B 222 0 SHEET 2 AA4 4 LYS B 200 THR B 204 1 N VAL B 203 O SER B 221 SHEET 3 AA4 4 VAL B 177 GLN B 181 1 N ILE B 178 O LYS B 200 SHEET 4 AA4 4 ILE B 235 PRO B 238 1 O ALA B 237 N ALA B 179 SHEET 1 AA5 2 VAL B 257 ILE B 258 0 SHEET 2 AA5 2 VAL B 281 TYR B 282 1 O VAL B 281 N ILE B 258 CISPEP 1 ASN A 147 PRO A 148 0 -14.05 CRYST1 121.434 121.434 178.472 90.00 90.00 90.00 P 4 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008235 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005603 0.00000