data_8HSI # _entry.id 8HSI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HSI pdb_00008hsi 10.2210/pdb8hsi/pdb WWPDB D_1300033810 ? ? EMDB EMD-34998 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-12-27 2 'Structure model' 1 1 2024-09-18 3 'Structure model' 1 2 2024-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin 4 3 'Structure model' em_admin 5 3 'Structure model' pdbx_entry_details 6 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_em_admin.last_update' 13 3 'Structure model' '_em_admin.last_update' 14 3 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HSI _pdbx_database_status.recvd_initial_deposition_date 2022-12-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of human TMEM87A, PE-bound' _pdbx_database_related.db_id EMD-34998 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email hm_kim@kaist.ac.kr _pdbx_contact_author.name_first 'Ho Min' _pdbx_contact_author.name_last Kim _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-5999-7325 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Han, A.' 1 0000-0003-2090-6769 'Kim, H.M.' 2 0000-0001-5999-7325 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 5830 _citation.page_last 5830 _citation.title ;GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory. ; _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-49297-8 _citation.pdbx_database_id_PubMed 38992057 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kang, H.' 1 ? primary 'Han, A.R.' 2 0000-0003-2090-6769 primary 'Zhang, A.' 3 ? primary 'Jeong, H.' 4 ? primary 'Koh, W.' 5 0000-0002-4398-1094 primary 'Lee, J.M.' 6 0000-0001-5245-7799 primary 'Lee, H.' 7 0000-0003-4648-586X primary 'Jo, H.Y.' 8 ? primary 'Maria-Solano, M.A.' 9 0000-0002-7837-0429 primary 'Bhalla, M.' 10 0000-0001-6045-3683 primary 'Kwon, J.' 11 ? primary 'Roh, W.S.' 12 0000-0002-2626-1618 primary 'Yang, J.' 13 ? primary 'An, H.J.' 14 ? primary 'Choi, S.' 15 0000-0002-7669-7954 primary 'Kim, H.M.' 16 0000-0003-0029-3643 primary 'Lee, C.J.' 17 0000-0002-3555-0980 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transmembrane protein 87A' 63494.766 1 ? ? ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ? 3 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 4 non-polymer syn '(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' 746.050 1 ? ? ? ? 5 non-polymer syn CHOLESTEROL 386.654 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME ; _entity_poly.pdbx_seq_one_letter_code_can ;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' L9Q 5 CHOLESTEROL CLR # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ALA n 1 4 ALA n 1 5 ALA n 1 6 TRP n 1 7 LEU n 1 8 GLN n 1 9 VAL n 1 10 LEU n 1 11 PRO n 1 12 VAL n 1 13 ILE n 1 14 LEU n 1 15 LEU n 1 16 LEU n 1 17 LEU n 1 18 GLY n 1 19 ALA n 1 20 HIS n 1 21 PRO n 1 22 SER n 1 23 PRO n 1 24 LEU n 1 25 SER n 1 26 PHE n 1 27 PHE n 1 28 SER n 1 29 ALA n 1 30 GLY n 1 31 PRO n 1 32 ALA n 1 33 THR n 1 34 VAL n 1 35 ALA n 1 36 ALA n 1 37 ALA n 1 38 ASP n 1 39 ARG n 1 40 SER n 1 41 LYS n 1 42 TRP n 1 43 HIS n 1 44 ILE n 1 45 PRO n 1 46 ILE n 1 47 PRO n 1 48 SER n 1 49 GLY n 1 50 LYS n 1 51 ASN n 1 52 TYR n 1 53 PHE n 1 54 SER n 1 55 PHE n 1 56 GLY n 1 57 LYS n 1 58 ILE n 1 59 LEU n 1 60 PHE n 1 61 ARG n 1 62 ASN n 1 63 THR n 1 64 THR n 1 65 ILE n 1 66 PHE n 1 67 LEU n 1 68 LYS n 1 69 PHE n 1 70 ASP n 1 71 GLY n 1 72 GLU n 1 73 PRO n 1 74 CYS n 1 75 ASP n 1 76 LEU n 1 77 SER n 1 78 LEU n 1 79 ASN n 1 80 ILE n 1 81 THR n 1 82 TRP n 1 83 TYR n 1 84 LEU n 1 85 LYS n 1 86 SER n 1 87 ALA n 1 88 ASP n 1 89 CYS n 1 90 TYR n 1 91 ASN n 1 92 GLU n 1 93 ILE n 1 94 TYR n 1 95 ASN n 1 96 PHE n 1 97 LYS n 1 98 ALA n 1 99 GLU n 1 100 GLU n 1 101 VAL n 1 102 GLU n 1 103 LEU n 1 104 TYR n 1 105 LEU n 1 106 GLU n 1 107 LYS n 1 108 LEU n 1 109 LYS n 1 110 GLU n 1 111 LYS n 1 112 ARG n 1 113 GLY n 1 114 LEU n 1 115 SER n 1 116 GLY n 1 117 LYS n 1 118 TYR n 1 119 GLN n 1 120 THR n 1 121 SER n 1 122 SER n 1 123 LYS n 1 124 LEU n 1 125 PHE n 1 126 GLN n 1 127 ASN n 1 128 CYS n 1 129 SER n 1 130 GLU n 1 131 LEU n 1 132 PHE n 1 133 LYS n 1 134 THR n 1 135 GLN n 1 136 THR n 1 137 PHE n 1 138 SER n 1 139 GLY n 1 140 ASP n 1 141 PHE n 1 142 MET n 1 143 HIS n 1 144 ARG n 1 145 LEU n 1 146 PRO n 1 147 LEU n 1 148 LEU n 1 149 GLY n 1 150 GLU n 1 151 LYS n 1 152 GLN n 1 153 GLU n 1 154 ALA n 1 155 LYS n 1 156 GLU n 1 157 ASN n 1 158 GLY n 1 159 THR n 1 160 ASN n 1 161 LEU n 1 162 THR n 1 163 PHE n 1 164 ILE n 1 165 GLY n 1 166 ASP n 1 167 LYS n 1 168 THR n 1 169 ALA n 1 170 MET n 1 171 HIS n 1 172 GLU n 1 173 PRO n 1 174 LEU n 1 175 GLN n 1 176 THR n 1 177 TRP n 1 178 GLN n 1 179 ASP n 1 180 ALA n 1 181 PRO n 1 182 TYR n 1 183 ILE n 1 184 PHE n 1 185 ILE n 1 186 VAL n 1 187 HIS n 1 188 ILE n 1 189 GLY n 1 190 ILE n 1 191 SER n 1 192 SER n 1 193 SER n 1 194 LYS n 1 195 GLU n 1 196 SER n 1 197 SER n 1 198 LYS n 1 199 GLU n 1 200 ASN n 1 201 SER n 1 202 LEU n 1 203 SER n 1 204 ASN n 1 205 LEU n 1 206 PHE n 1 207 THR n 1 208 MET n 1 209 THR n 1 210 VAL n 1 211 GLU n 1 212 VAL n 1 213 LYS n 1 214 GLY n 1 215 PRO n 1 216 TYR n 1 217 GLU n 1 218 TYR n 1 219 LEU n 1 220 THR n 1 221 LEU n 1 222 GLU n 1 223 ASP n 1 224 TYR n 1 225 PRO n 1 226 LEU n 1 227 MET n 1 228 ILE n 1 229 PHE n 1 230 PHE n 1 231 MET n 1 232 VAL n 1 233 MET n 1 234 CYS n 1 235 ILE n 1 236 VAL n 1 237 TYR n 1 238 VAL n 1 239 LEU n 1 240 PHE n 1 241 GLY n 1 242 VAL n 1 243 LEU n 1 244 TRP n 1 245 LEU n 1 246 ALA n 1 247 TRP n 1 248 SER n 1 249 ALA n 1 250 CYS n 1 251 TYR n 1 252 TRP n 1 253 ARG n 1 254 ASP n 1 255 LEU n 1 256 LEU n 1 257 ARG n 1 258 ILE n 1 259 GLN n 1 260 PHE n 1 261 TRP n 1 262 ILE n 1 263 GLY n 1 264 ALA n 1 265 VAL n 1 266 ILE n 1 267 PHE n 1 268 LEU n 1 269 GLY n 1 270 MET n 1 271 LEU n 1 272 GLU n 1 273 LYS n 1 274 ALA n 1 275 VAL n 1 276 PHE n 1 277 TYR n 1 278 ALA n 1 279 GLU n 1 280 PHE n 1 281 GLN n 1 282 ASN n 1 283 ILE n 1 284 ARG n 1 285 TYR n 1 286 LYS n 1 287 GLY n 1 288 GLU n 1 289 SER n 1 290 VAL n 1 291 GLN n 1 292 GLY n 1 293 ALA n 1 294 LEU n 1 295 ILE n 1 296 LEU n 1 297 ALA n 1 298 GLU n 1 299 LEU n 1 300 LEU n 1 301 SER n 1 302 ALA n 1 303 VAL n 1 304 LYS n 1 305 ARG n 1 306 SER n 1 307 LEU n 1 308 ALA n 1 309 ARG n 1 310 THR n 1 311 LEU n 1 312 VAL n 1 313 ILE n 1 314 ILE n 1 315 VAL n 1 316 SER n 1 317 LEU n 1 318 GLY n 1 319 TYR n 1 320 GLY n 1 321 ILE n 1 322 VAL n 1 323 LYS n 1 324 PRO n 1 325 ARG n 1 326 LEU n 1 327 GLY n 1 328 VAL n 1 329 THR n 1 330 LEU n 1 331 HIS n 1 332 LYS n 1 333 VAL n 1 334 VAL n 1 335 VAL n 1 336 ALA n 1 337 GLY n 1 338 ALA n 1 339 LEU n 1 340 TYR n 1 341 LEU n 1 342 LEU n 1 343 PHE n 1 344 SER n 1 345 GLY n 1 346 MET n 1 347 GLU n 1 348 GLY n 1 349 VAL n 1 350 LEU n 1 351 ARG n 1 352 VAL n 1 353 THR n 1 354 GLY n 1 355 ALA n 1 356 GLN n 1 357 THR n 1 358 ASP n 1 359 LEU n 1 360 ALA n 1 361 SER n 1 362 LEU n 1 363 ALA n 1 364 PHE n 1 365 ILE n 1 366 PRO n 1 367 LEU n 1 368 ALA n 1 369 PHE n 1 370 LEU n 1 371 ASP n 1 372 THR n 1 373 ALA n 1 374 LEU n 1 375 CYS n 1 376 TRP n 1 377 TRP n 1 378 ILE n 1 379 PHE n 1 380 ILE n 1 381 SER n 1 382 LEU n 1 383 THR n 1 384 GLN n 1 385 THR n 1 386 MET n 1 387 LYS n 1 388 LEU n 1 389 LEU n 1 390 LYS n 1 391 LEU n 1 392 ARG n 1 393 ARG n 1 394 ASN n 1 395 ILE n 1 396 VAL n 1 397 LYS n 1 398 LEU n 1 399 SER n 1 400 LEU n 1 401 TYR n 1 402 ARG n 1 403 HIS n 1 404 PHE n 1 405 THR n 1 406 ASN n 1 407 THR n 1 408 LEU n 1 409 ILE n 1 410 LEU n 1 411 ALA n 1 412 VAL n 1 413 ALA n 1 414 ALA n 1 415 SER n 1 416 ILE n 1 417 VAL n 1 418 PHE n 1 419 ILE n 1 420 ILE n 1 421 TRP n 1 422 THR n 1 423 THR n 1 424 MET n 1 425 LYS n 1 426 PHE n 1 427 ARG n 1 428 ILE n 1 429 VAL n 1 430 THR n 1 431 CYS n 1 432 GLN n 1 433 SER n 1 434 ASP n 1 435 TRP n 1 436 ARG n 1 437 GLU n 1 438 LEU n 1 439 TRP n 1 440 VAL n 1 441 ASP n 1 442 ASP n 1 443 ALA n 1 444 ILE n 1 445 TRP n 1 446 ARG n 1 447 LEU n 1 448 LEU n 1 449 PHE n 1 450 SER n 1 451 MET n 1 452 ILE n 1 453 LEU n 1 454 PHE n 1 455 VAL n 1 456 ILE n 1 457 MET n 1 458 VAL n 1 459 LEU n 1 460 TRP n 1 461 ARG n 1 462 PRO n 1 463 SER n 1 464 ALA n 1 465 ASN n 1 466 ASN n 1 467 GLN n 1 468 ARG n 1 469 PHE n 1 470 ALA n 1 471 PHE n 1 472 SER n 1 473 PRO n 1 474 LEU n 1 475 SER n 1 476 GLU n 1 477 GLU n 1 478 GLU n 1 479 GLU n 1 480 GLU n 1 481 ASP n 1 482 GLU n 1 483 GLN n 1 484 LYS n 1 485 GLU n 1 486 PRO n 1 487 MET n 1 488 LEU n 1 489 LYS n 1 490 GLU n 1 491 SER n 1 492 PHE n 1 493 GLU n 1 494 GLY n 1 495 MET n 1 496 LYS n 1 497 MET n 1 498 ARG n 1 499 SER n 1 500 THR n 1 501 LYS n 1 502 GLN n 1 503 GLU n 1 504 PRO n 1 505 ASN n 1 506 GLY n 1 507 ASN n 1 508 SER n 1 509 LYS n 1 510 VAL n 1 511 ASN n 1 512 LYS n 1 513 ALA n 1 514 GLN n 1 515 GLU n 1 516 ASP n 1 517 ASP n 1 518 LEU n 1 519 LYS n 1 520 TRP n 1 521 VAL n 1 522 GLU n 1 523 GLU n 1 524 ASN n 1 525 VAL n 1 526 PRO n 1 527 SER n 1 528 SER n 1 529 VAL n 1 530 THR n 1 531 ASP n 1 532 VAL n 1 533 ALA n 1 534 LEU n 1 535 PRO n 1 536 ALA n 1 537 LEU n 1 538 LEU n 1 539 ASP n 1 540 SER n 1 541 ASP n 1 542 GLU n 1 543 GLU n 1 544 ARG n 1 545 MET n 1 546 ILE n 1 547 THR n 1 548 HIS n 1 549 PHE n 1 550 GLU n 1 551 ARG n 1 552 SER n 1 553 LYS n 1 554 MET n 1 555 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 555 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TMEM87A, PSEC0094' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell Expi293F _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? 4 3 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 6 3 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 3 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CLR non-polymer . CHOLESTEROL ? 'C27 H46 O' 386.654 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 L9Q non-polymer . '(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' 1-stearoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine 'C41 H80 N O8 P' 746.050 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ALA 5 5 ? ? ? A . n A 1 6 TRP 6 6 ? ? ? A . n A 1 7 LEU 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 VAL 9 9 ? ? ? A . n A 1 10 LEU 10 10 ? ? ? A . n A 1 11 PRO 11 11 ? ? ? A . n A 1 12 VAL 12 12 ? ? ? A . n A 1 13 ILE 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 LEU 15 15 ? ? ? A . n A 1 16 LEU 16 16 ? ? ? A . n A 1 17 LEU 17 17 ? ? ? A . n A 1 18 GLY 18 18 ? ? ? A . n A 1 19 ALA 19 19 ? ? ? A . n A 1 20 HIS 20 20 ? ? ? A . n A 1 21 PRO 21 21 ? ? ? A . n A 1 22 SER 22 22 ? ? ? A . n A 1 23 PRO 23 23 ? ? ? A . n A 1 24 LEU 24 24 ? ? ? A . n A 1 25 SER 25 25 ? ? ? A . n A 1 26 PHE 26 26 ? ? ? A . n A 1 27 PHE 27 27 ? ? ? A . n A 1 28 SER 28 28 ? ? ? A . n A 1 29 ALA 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n A 1 31 PRO 31 31 ? ? ? A . n A 1 32 ALA 32 32 ? ? ? A . n A 1 33 THR 33 33 ? ? ? A . n A 1 34 VAL 34 34 ? ? ? A . n A 1 35 ALA 35 35 ? ? ? A . n A 1 36 ALA 36 36 ? ? ? A . n A 1 37 ALA 37 37 ? ? ? A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 HIS 43 43 43 HIS HIS A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 THR 63 63 63 THR THR A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 CYS 74 74 74 CYS CYS A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 TYR 118 118 118 TYR TYR A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 CYS 128 128 128 CYS CYS A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 ASP 140 140 140 ASP ASP A . n A 1 141 PHE 141 141 141 PHE PHE A . n A 1 142 MET 142 142 142 MET MET A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 LEU 147 147 ? ? ? A . n A 1 148 LEU 148 148 ? ? ? A . n A 1 149 GLY 149 149 ? ? ? A . n A 1 150 GLU 150 150 ? ? ? A . n A 1 151 LYS 151 151 ? ? ? A . n A 1 152 GLN 152 152 ? ? ? A . n A 1 153 GLU 153 153 ? ? ? A . n A 1 154 ALA 154 154 ? ? ? A . n A 1 155 LYS 155 155 ? ? ? A . n A 1 156 GLU 156 156 ? ? ? A . n A 1 157 ASN 157 157 ? ? ? A . n A 1 158 GLY 158 158 ? ? ? A . n A 1 159 THR 159 159 ? ? ? A . n A 1 160 ASN 160 160 ? ? ? A . n A 1 161 LEU 161 161 ? ? ? A . n A 1 162 THR 162 162 ? ? ? A . n A 1 163 PHE 163 163 ? ? ? A . n A 1 164 ILE 164 164 ? ? ? A . n A 1 165 GLY 165 165 ? ? ? A . n A 1 166 ASP 166 166 ? ? ? A . n A 1 167 LYS 167 167 ? ? ? A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 ALA 169 169 169 ALA ALA A . n A 1 170 MET 170 170 170 MET MET A . n A 1 171 HIS 171 171 171 HIS HIS A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 PRO 173 173 173 PRO PRO A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLN 175 175 175 GLN GLN A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 TRP 177 177 177 TRP TRP A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 HIS 187 187 187 HIS HIS A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 SER 191 191 191 SER SER A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 SER 193 193 ? ? ? A . n A 1 194 LYS 194 194 ? ? ? A . n A 1 195 GLU 195 195 ? ? ? A . n A 1 196 SER 196 196 ? ? ? A . n A 1 197 SER 197 197 ? ? ? A . n A 1 198 LYS 198 198 ? ? ? A . n A 1 199 GLU 199 199 ? ? ? A . n A 1 200 ASN 200 200 ? ? ? A . n A 1 201 SER 201 201 ? ? ? A . n A 1 202 LEU 202 202 ? ? ? A . n A 1 203 SER 203 203 203 SER SER A . n A 1 204 ASN 204 204 204 ASN ASN A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 PHE 206 206 206 PHE PHE A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 MET 208 208 208 MET MET A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 LYS 213 213 213 LYS LYS A . n A 1 214 GLY 214 214 214 GLY GLY A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 THR 220 220 220 THR THR A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 GLU 222 222 222 GLU GLU A . n A 1 223 ASP 223 223 223 ASP ASP A . n A 1 224 TYR 224 224 224 TYR TYR A . n A 1 225 PRO 225 225 225 PRO PRO A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 MET 227 227 227 MET MET A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 PHE 229 229 229 PHE PHE A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 MET 231 231 231 MET MET A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 MET 233 233 233 MET MET A . n A 1 234 CYS 234 234 234 CYS CYS A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 TYR 237 237 237 TYR TYR A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 LEU 239 239 239 LEU LEU A . n A 1 240 PHE 240 240 240 PHE PHE A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 LEU 243 243 243 LEU LEU A . n A 1 244 TRP 244 244 244 TRP TRP A . n A 1 245 LEU 245 245 245 LEU LEU A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 TRP 247 247 247 TRP TRP A . n A 1 248 SER 248 248 248 SER SER A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 CYS 250 250 250 CYS CYS A . n A 1 251 TYR 251 251 251 TYR TYR A . n A 1 252 TRP 252 252 252 TRP TRP A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 LEU 255 255 255 LEU LEU A . n A 1 256 LEU 256 256 256 LEU LEU A . n A 1 257 ARG 257 257 257 ARG ARG A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 GLN 259 259 259 GLN GLN A . n A 1 260 PHE 260 260 260 PHE PHE A . n A 1 261 TRP 261 261 261 TRP TRP A . n A 1 262 ILE 262 262 262 ILE ILE A . n A 1 263 GLY 263 263 263 GLY GLY A . n A 1 264 ALA 264 264 264 ALA ALA A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 ILE 266 266 266 ILE ILE A . n A 1 267 PHE 267 267 267 PHE PHE A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 GLY 269 269 269 GLY GLY A . n A 1 270 MET 270 270 270 MET MET A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LYS 273 273 273 LYS LYS A . n A 1 274 ALA 274 274 274 ALA ALA A . n A 1 275 VAL 275 275 275 VAL VAL A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 TYR 277 277 277 TYR TYR A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLU 279 279 279 GLU GLU A . n A 1 280 PHE 280 280 280 PHE PHE A . n A 1 281 GLN 281 281 281 GLN GLN A . n A 1 282 ASN 282 282 282 ASN ASN A . n A 1 283 ILE 283 283 283 ILE ILE A . n A 1 284 ARG 284 284 284 ARG ARG A . n A 1 285 TYR 285 285 285 TYR TYR A . n A 1 286 LYS 286 286 286 LYS LYS A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 GLN 291 291 291 GLN GLN A . n A 1 292 GLY 292 292 292 GLY GLY A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 LEU 296 296 296 LEU LEU A . n A 1 297 ALA 297 297 297 ALA ALA A . n A 1 298 GLU 298 298 298 GLU GLU A . n A 1 299 LEU 299 299 299 LEU LEU A . n A 1 300 LEU 300 300 300 LEU LEU A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 ARG 305 305 305 ARG ARG A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 ALA 308 308 308 ALA ALA A . n A 1 309 ARG 309 309 309 ARG ARG A . n A 1 310 THR 310 310 310 THR THR A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 VAL 312 312 312 VAL VAL A . n A 1 313 ILE 313 313 313 ILE ILE A . n A 1 314 ILE 314 314 314 ILE ILE A . n A 1 315 VAL 315 315 315 VAL VAL A . n A 1 316 SER 316 316 316 SER SER A . n A 1 317 LEU 317 317 317 LEU LEU A . n A 1 318 GLY 318 318 318 GLY GLY A . n A 1 319 TYR 319 319 319 TYR TYR A . n A 1 320 GLY 320 320 320 GLY GLY A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 VAL 322 322 322 VAL VAL A . n A 1 323 LYS 323 323 323 LYS LYS A . n A 1 324 PRO 324 324 324 PRO PRO A . n A 1 325 ARG 325 325 325 ARG ARG A . n A 1 326 LEU 326 326 326 LEU LEU A . n A 1 327 GLY 327 327 327 GLY GLY A . n A 1 328 VAL 328 328 328 VAL VAL A . n A 1 329 THR 329 329 329 THR THR A . n A 1 330 LEU 330 330 330 LEU LEU A . n A 1 331 HIS 331 331 331 HIS HIS A . n A 1 332 LYS 332 332 332 LYS LYS A . n A 1 333 VAL 333 333 333 VAL VAL A . n A 1 334 VAL 334 334 334 VAL VAL A . n A 1 335 VAL 335 335 335 VAL VAL A . n A 1 336 ALA 336 336 336 ALA ALA A . n A 1 337 GLY 337 337 337 GLY GLY A . n A 1 338 ALA 338 338 338 ALA ALA A . n A 1 339 LEU 339 339 339 LEU LEU A . n A 1 340 TYR 340 340 340 TYR TYR A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 LEU 342 342 342 LEU LEU A . n A 1 343 PHE 343 343 343 PHE PHE A . n A 1 344 SER 344 344 344 SER SER A . n A 1 345 GLY 345 345 345 GLY GLY A . n A 1 346 MET 346 346 346 MET MET A . n A 1 347 GLU 347 347 347 GLU GLU A . n A 1 348 GLY 348 348 348 GLY GLY A . n A 1 349 VAL 349 349 349 VAL VAL A . n A 1 350 LEU 350 350 350 LEU LEU A . n A 1 351 ARG 351 351 351 ARG ARG A . n A 1 352 VAL 352 352 352 VAL VAL A . n A 1 353 THR 353 353 353 THR THR A . n A 1 354 GLY 354 354 354 GLY GLY A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 GLN 356 356 356 GLN GLN A . n A 1 357 THR 357 357 357 THR THR A . n A 1 358 ASP 358 358 358 ASP ASP A . n A 1 359 LEU 359 359 359 LEU LEU A . n A 1 360 ALA 360 360 360 ALA ALA A . n A 1 361 SER 361 361 361 SER SER A . n A 1 362 LEU 362 362 362 LEU LEU A . n A 1 363 ALA 363 363 363 ALA ALA A . n A 1 364 PHE 364 364 364 PHE PHE A . n A 1 365 ILE 365 365 365 ILE ILE A . n A 1 366 PRO 366 366 366 PRO PRO A . n A 1 367 LEU 367 367 367 LEU LEU A . n A 1 368 ALA 368 368 368 ALA ALA A . n A 1 369 PHE 369 369 369 PHE PHE A . n A 1 370 LEU 370 370 370 LEU LEU A . n A 1 371 ASP 371 371 371 ASP ASP A . n A 1 372 THR 372 372 372 THR THR A . n A 1 373 ALA 373 373 373 ALA ALA A . n A 1 374 LEU 374 374 374 LEU LEU A . n A 1 375 CYS 375 375 375 CYS CYS A . n A 1 376 TRP 376 376 376 TRP TRP A . n A 1 377 TRP 377 377 377 TRP TRP A . n A 1 378 ILE 378 378 378 ILE ILE A . n A 1 379 PHE 379 379 379 PHE PHE A . n A 1 380 ILE 380 380 380 ILE ILE A . n A 1 381 SER 381 381 381 SER SER A . n A 1 382 LEU 382 382 382 LEU LEU A . n A 1 383 THR 383 383 383 THR THR A . n A 1 384 GLN 384 384 384 GLN GLN A . n A 1 385 THR 385 385 385 THR THR A . n A 1 386 MET 386 386 386 MET MET A . n A 1 387 LYS 387 387 387 LYS LYS A . n A 1 388 LEU 388 388 388 LEU LEU A . n A 1 389 LEU 389 389 389 LEU LEU A . n A 1 390 LYS 390 390 390 LYS LYS A . n A 1 391 LEU 391 391 391 LEU LEU A . n A 1 392 ARG 392 392 392 ARG ARG A . n A 1 393 ARG 393 393 393 ARG ARG A . n A 1 394 ASN 394 394 394 ASN ASN A . n A 1 395 ILE 395 395 395 ILE ILE A . n A 1 396 VAL 396 396 396 VAL VAL A . n A 1 397 LYS 397 397 397 LYS LYS A . n A 1 398 LEU 398 398 398 LEU LEU A . n A 1 399 SER 399 399 399 SER SER A . n A 1 400 LEU 400 400 400 LEU LEU A . n A 1 401 TYR 401 401 401 TYR TYR A . n A 1 402 ARG 402 402 402 ARG ARG A . n A 1 403 HIS 403 403 403 HIS HIS A . n A 1 404 PHE 404 404 404 PHE PHE A . n A 1 405 THR 405 405 405 THR THR A . n A 1 406 ASN 406 406 406 ASN ASN A . n A 1 407 THR 407 407 407 THR THR A . n A 1 408 LEU 408 408 408 LEU LEU A . n A 1 409 ILE 409 409 409 ILE ILE A . n A 1 410 LEU 410 410 410 LEU LEU A . n A 1 411 ALA 411 411 411 ALA ALA A . n A 1 412 VAL 412 412 412 VAL VAL A . n A 1 413 ALA 413 413 413 ALA ALA A . n A 1 414 ALA 414 414 414 ALA ALA A . n A 1 415 SER 415 415 415 SER SER A . n A 1 416 ILE 416 416 416 ILE ILE A . n A 1 417 VAL 417 417 417 VAL VAL A . n A 1 418 PHE 418 418 418 PHE PHE A . n A 1 419 ILE 419 419 419 ILE ILE A . n A 1 420 ILE 420 420 420 ILE ILE A . n A 1 421 TRP 421 421 421 TRP TRP A . n A 1 422 THR 422 422 422 THR THR A . n A 1 423 THR 423 423 423 THR THR A . n A 1 424 MET 424 424 424 MET MET A . n A 1 425 LYS 425 425 425 LYS LYS A . n A 1 426 PHE 426 426 426 PHE PHE A . n A 1 427 ARG 427 427 427 ARG ARG A . n A 1 428 ILE 428 428 428 ILE ILE A . n A 1 429 VAL 429 429 429 VAL VAL A . n A 1 430 THR 430 430 430 THR THR A . n A 1 431 CYS 431 431 431 CYS CYS A . n A 1 432 GLN 432 432 432 GLN GLN A . n A 1 433 SER 433 433 433 SER SER A . n A 1 434 ASP 434 434 434 ASP ASP A . n A 1 435 TRP 435 435 435 TRP TRP A . n A 1 436 ARG 436 436 436 ARG ARG A . n A 1 437 GLU 437 437 437 GLU GLU A . n A 1 438 LEU 438 438 438 LEU LEU A . n A 1 439 TRP 439 439 439 TRP TRP A . n A 1 440 VAL 440 440 440 VAL VAL A . n A 1 441 ASP 441 441 441 ASP ASP A . n A 1 442 ASP 442 442 442 ASP ASP A . n A 1 443 ALA 443 443 443 ALA ALA A . n A 1 444 ILE 444 444 444 ILE ILE A . n A 1 445 TRP 445 445 445 TRP TRP A . n A 1 446 ARG 446 446 446 ARG ARG A . n A 1 447 LEU 447 447 447 LEU LEU A . n A 1 448 LEU 448 448 448 LEU LEU A . n A 1 449 PHE 449 449 449 PHE PHE A . n A 1 450 SER 450 450 450 SER SER A . n A 1 451 MET 451 451 451 MET MET A . n A 1 452 ILE 452 452 452 ILE ILE A . n A 1 453 LEU 453 453 453 LEU LEU A . n A 1 454 PHE 454 454 454 PHE PHE A . n A 1 455 VAL 455 455 455 VAL VAL A . n A 1 456 ILE 456 456 456 ILE ILE A . n A 1 457 MET 457 457 457 MET MET A . n A 1 458 VAL 458 458 458 VAL VAL A . n A 1 459 LEU 459 459 459 LEU LEU A . n A 1 460 TRP 460 460 460 TRP TRP A . n A 1 461 ARG 461 461 461 ARG ARG A . n A 1 462 PRO 462 462 462 PRO PRO A . n A 1 463 SER 463 463 463 SER SER A . n A 1 464 ALA 464 464 464 ALA ALA A . n A 1 465 ASN 465 465 465 ASN ASN A . n A 1 466 ASN 466 466 466 ASN ASN A . n A 1 467 GLN 467 467 467 GLN GLN A . n A 1 468 ARG 468 468 468 ARG ARG A . n A 1 469 PHE 469 469 469 PHE PHE A . n A 1 470 ALA 470 470 470 ALA ALA A . n A 1 471 PHE 471 471 471 PHE PHE A . n A 1 472 SER 472 472 472 SER SER A . n A 1 473 PRO 473 473 473 PRO PRO A . n A 1 474 LEU 474 474 ? ? ? A . n A 1 475 SER 475 475 ? ? ? A . n A 1 476 GLU 476 476 ? ? ? A . n A 1 477 GLU 477 477 ? ? ? A . n A 1 478 GLU 478 478 ? ? ? A . n A 1 479 GLU 479 479 ? ? ? A . n A 1 480 GLU 480 480 ? ? ? A . n A 1 481 ASP 481 481 ? ? ? A . n A 1 482 GLU 482 482 ? ? ? A . n A 1 483 GLN 483 483 ? ? ? A . n A 1 484 LYS 484 484 ? ? ? A . n A 1 485 GLU 485 485 ? ? ? A . n A 1 486 PRO 486 486 ? ? ? A . n A 1 487 MET 487 487 ? ? ? A . n A 1 488 LEU 488 488 ? ? ? A . n A 1 489 LYS 489 489 ? ? ? A . n A 1 490 GLU 490 490 ? ? ? A . n A 1 491 SER 491 491 ? ? ? A . n A 1 492 PHE 492 492 ? ? ? A . n A 1 493 GLU 493 493 ? ? ? A . n A 1 494 GLY 494 494 ? ? ? A . n A 1 495 MET 495 495 ? ? ? A . n A 1 496 LYS 496 496 ? ? ? A . n A 1 497 MET 497 497 ? ? ? A . n A 1 498 ARG 498 498 ? ? ? A . n A 1 499 SER 499 499 ? ? ? A . n A 1 500 THR 500 500 ? ? ? A . n A 1 501 LYS 501 501 ? ? ? A . n A 1 502 GLN 502 502 ? ? ? A . n A 1 503 GLU 503 503 ? ? ? A . n A 1 504 PRO 504 504 ? ? ? A . n A 1 505 ASN 505 505 ? ? ? A . n A 1 506 GLY 506 506 ? ? ? A . n A 1 507 ASN 507 507 ? ? ? A . n A 1 508 SER 508 508 ? ? ? A . n A 1 509 LYS 509 509 ? ? ? A . n A 1 510 VAL 510 510 ? ? ? A . n A 1 511 ASN 511 511 ? ? ? A . n A 1 512 LYS 512 512 ? ? ? A . n A 1 513 ALA 513 513 ? ? ? A . n A 1 514 GLN 514 514 ? ? ? A . n A 1 515 GLU 515 515 ? ? ? A . n A 1 516 ASP 516 516 ? ? ? A . n A 1 517 ASP 517 517 ? ? ? A . n A 1 518 LEU 518 518 ? ? ? A . n A 1 519 LYS 519 519 ? ? ? A . n A 1 520 TRP 520 520 ? ? ? A . n A 1 521 VAL 521 521 ? ? ? A . n A 1 522 GLU 522 522 ? ? ? A . n A 1 523 GLU 523 523 ? ? ? A . n A 1 524 ASN 524 524 ? ? ? A . n A 1 525 VAL 525 525 ? ? ? A . n A 1 526 PRO 526 526 ? ? ? A . n A 1 527 SER 527 527 ? ? ? A . n A 1 528 SER 528 528 ? ? ? A . n A 1 529 VAL 529 529 ? ? ? A . n A 1 530 THR 530 530 ? ? ? A . n A 1 531 ASP 531 531 ? ? ? A . n A 1 532 VAL 532 532 ? ? ? A . n A 1 533 ALA 533 533 ? ? ? A . n A 1 534 LEU 534 534 ? ? ? A . n A 1 535 PRO 535 535 ? ? ? A . n A 1 536 ALA 536 536 ? ? ? A . n A 1 537 LEU 537 537 ? ? ? A . n A 1 538 LEU 538 538 ? ? ? A . n A 1 539 ASP 539 539 ? ? ? A . n A 1 540 SER 540 540 ? ? ? A . n A 1 541 ASP 541 541 ? ? ? A . n A 1 542 GLU 542 542 ? ? ? A . n A 1 543 GLU 543 543 ? ? ? A . n A 1 544 ARG 544 544 ? ? ? A . n A 1 545 MET 545 545 ? ? ? A . n A 1 546 ILE 546 546 ? ? ? A . n A 1 547 THR 547 547 ? ? ? A . n A 1 548 HIS 548 548 ? ? ? A . n A 1 549 PHE 549 549 ? ? ? A . n A 1 550 GLU 550 550 ? ? ? A . n A 1 551 ARG 551 551 ? ? ? A . n A 1 552 SER 552 552 ? ? ? A . n A 1 553 LYS 553 553 ? ? ? A . n A 1 554 MET 554 554 ? ? ? A . n A 1 555 GLU 555 555 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 486 n B 2 NAG 2 B NAG 2 A NAG 487 n C 2 NAG 1 C NAG 1 A NAG 602 n C 2 NAG 2 C NAG 2 A NAG 603 n D 3 NAG 1 D NAG 1 A NAG 604 n D 3 NAG 2 D NAG 2 A NAG 605 n D 3 BMA 3 D BMA 3 A BMA 606 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ? 2 CLR ? ? CLR ? ? 'SUBJECT OF INVESTIGATION' ? 3 L9Q ? ? L9Q ? ? 'SUBJECT OF INVESTIGATION' ? 4 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 L9Q 1 601 607 L9Q L9Q A . F 5 CLR 1 602 701 CLR CLR A . G 5 CLR 1 603 801 CLR CLR A . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.19_4092: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8HSI _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HSI _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8HSI _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 3619 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 1.081 ? 4908 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 16.234 ? 539 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.285 ? 577 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 ? 567 ? f_plane_restr ? ? # _struct.entry_id 8HSI _struct.title 'Cryo-EM structure of human TMEM87A, PE-bound' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HSI _struct_keywords.text 'non-selective cation channel, ion channel, membrane protein, Golgi-localized protein' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TM87A_HUMAN _struct_ref.pdbx_db_accession Q8NBN3 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8HSI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 555 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8NBN3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 555 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 555 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 90 ? ASN A 95 ? TYR A 90 ASN A 95 1 ? 6 HELX_P HELX_P2 AA2 LYS A 97 ? GLU A 99 ? LYS A 97 GLU A 99 5 ? 3 HELX_P HELX_P3 AA3 GLU A 100 ? LEU A 108 ? GLU A 100 LEU A 108 1 ? 9 HELX_P HELX_P4 AA4 ASP A 223 ? TYR A 251 ? ASP A 223 TYR A 251 1 ? 29 HELX_P HELX_P5 AA5 ARG A 257 ? GLY A 287 ? ARG A 257 GLY A 287 1 ? 31 HELX_P HELX_P6 AA6 ALA A 293 ? LEU A 317 ? ALA A 293 LEU A 317 1 ? 25 HELX_P HELX_P7 AA7 VAL A 334 ? GLY A 337 ? VAL A 334 GLY A 337 5 ? 4 HELX_P HELX_P8 AA8 ALA A 338 ? THR A 353 ? ALA A 338 THR A 353 1 ? 16 HELX_P HELX_P9 AA9 LEU A 359 ? ARG A 392 ? LEU A 359 ARG A 392 1 ? 34 HELX_P HELX_P10 AB1 ILE A 395 ? PHE A 426 ? ILE A 395 PHE A 426 1 ? 32 HELX_P HELX_P11 AB2 TRP A 439 ? ASP A 442 ? TRP A 439 ASP A 442 5 ? 4 HELX_P HELX_P12 AB3 ALA A 443 ? TRP A 460 ? ALA A 443 TRP A 460 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 74 SG ? ? ? 1_555 A CYS 128 SG ? ? A CYS 74 A CYS 128 1_555 ? ? ? ? ? ? ? 2.023 ? ? disulf2 disulf ? ? A CYS 89 SG ? ? ? 1_555 A CYS 431 SG ? ? A CYS 89 A CYS 431 1_555 ? ? ? ? ? ? ? 2.035 ? ? covale1 covale one ? A ASN 62 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 62 C NAG 1 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation covale2 covale one ? A ASN 79 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 79 B NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation covale3 covale one ? A ASN 127 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 127 D NAG 1 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.440 ? ? covale6 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.437 ? ? covale7 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.439 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG B . ? ASN A 79 ? NAG B 1 ? 1_555 ASN A 79 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG C . ? ASN A 62 ? NAG C 1 ? 1_555 ASN A 62 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG D . ? ASN A 127 ? NAG D 1 ? 1_555 ASN A 127 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 CYS A 74 ? CYS A 128 ? CYS A 74 ? 1_555 CYS A 128 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 89 ? CYS A 431 ? CYS A 89 ? 1_555 CYS A 431 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 41 ? ILE A 44 ? LYS A 41 ILE A 44 AA1 2 PHE A 206 ? LYS A 213 ? PHE A 206 LYS A 213 AA1 3 THR A 64 ? GLY A 71 ? THR A 64 GLY A 71 AA2 1 TYR A 52 ? LEU A 59 ? TYR A 52 LEU A 59 AA2 2 ALA A 180 ? SER A 191 ? ALA A 180 SER A 191 AA2 3 SER A 77 ? LYS A 85 ? SER A 77 LYS A 85 AA2 4 TYR A 118 ? PHE A 125 ? TYR A 118 PHE A 125 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 44 ? N ILE A 44 O MET A 208 ? O MET A 208 AA1 2 3 O LYS A 213 ? O LYS A 213 N THR A 64 ? N THR A 64 AA2 1 2 N LYS A 57 ? N LYS A 57 O TYR A 182 ? O TYR A 182 AA2 2 3 O HIS A 187 ? O HIS A 187 N THR A 81 ? N THR A 81 AA2 3 4 N LEU A 78 ? N LEU A 78 O PHE A 125 ? O PHE A 125 # _pdbx_entry_details.entry_id 8HSI _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 47 ? ? -67.50 76.76 2 1 CYS A 128 ? ? -145.41 -28.30 3 1 GLN A 178 ? ? -170.97 143.67 4 1 GLU A 222 ? ? 77.44 -6.33 5 1 ALA A 293 ? ? -130.82 -61.43 6 1 THR A 329 ? ? -121.55 -55.35 7 1 LYS A 332 ? ? 75.15 -5.67 8 1 VAL A 333 ? ? -124.01 -62.65 9 1 THR A 357 ? ? -97.60 32.97 10 1 ARG A 393 ? ? 62.39 60.55 11 1 PHE A 426 ? ? -93.92 -60.30 12 1 ARG A 427 ? ? -94.97 47.51 13 1 GLU A 437 ? ? -94.46 56.66 14 1 ASN A 466 ? ? -90.57 56.56 15 1 GLN A 467 ? ? -143.87 -0.94 16 1 PHE A 469 ? ? -97.94 30.92 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8HSI _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ;Chimera Fit in map tool was used for initial local fitting. Then, Real-space refinement with the rigid body option in PHENIX was used for flexible fitting. ; _em_3d_fitting.overall_b_value 40 _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_reconstruction.entry_id 8HSI _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'Non-uniform refinement and CTF refinement were used to improve the particle alignment and map quality.' _em_3d_reconstruction.resolution 3.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 445198 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '50mM Tris pH 9.0, 250mM NaCl, 0.01% (w/v) LMNG, 0.002% (w/v) CHS' _em_buffer.pH 9.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT' _em_entity_assembly.name 'Transmembrane protein 87A with GFP tag and Twin-strep tag' _em_entity_assembly.details 'Transmembrane protein 87A with GFP tag and Twin-strep tag purified with detergent LMNG/CHS' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_image_scans.entry_id 8HSI _em_image_scans.id 1 _em_image_scans.number_digital_images ? _em_image_scans.details ? _em_image_scans.scanner_model ? _em_image_scans.sampling_size ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.citation_id ? _em_image_scans.dimension_height 4092 _em_image_scans.dimension_width 5760 _em_image_scans.frames_per_image ? _em_image_scans.image_recording_id 1 _em_image_scans.used_frames_per_image ? # _em_imaging.entry_id 8HSI _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt 10 _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details 'Using Zemlin tableau in sherpa' _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1900 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification 58900 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 70 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details 15mA _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8HSI _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8HSI _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8HSI _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ALA 5 ? A ALA 5 6 1 Y 1 A TRP 6 ? A TRP 6 7 1 Y 1 A LEU 7 ? A LEU 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A VAL 9 ? A VAL 9 10 1 Y 1 A LEU 10 ? A LEU 10 11 1 Y 1 A PRO 11 ? A PRO 11 12 1 Y 1 A VAL 12 ? A VAL 12 13 1 Y 1 A ILE 13 ? A ILE 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A LEU 15 ? A LEU 15 16 1 Y 1 A LEU 16 ? A LEU 16 17 1 Y 1 A LEU 17 ? A LEU 17 18 1 Y 1 A GLY 18 ? A GLY 18 19 1 Y 1 A ALA 19 ? A ALA 19 20 1 Y 1 A HIS 20 ? A HIS 20 21 1 Y 1 A PRO 21 ? A PRO 21 22 1 Y 1 A SER 22 ? A SER 22 23 1 Y 1 A PRO 23 ? A PRO 23 24 1 Y 1 A LEU 24 ? A LEU 24 25 1 Y 1 A SER 25 ? A SER 25 26 1 Y 1 A PHE 26 ? A PHE 26 27 1 Y 1 A PHE 27 ? A PHE 27 28 1 Y 1 A SER 28 ? A SER 28 29 1 Y 1 A ALA 29 ? A ALA 29 30 1 Y 1 A GLY 30 ? A GLY 30 31 1 Y 1 A PRO 31 ? A PRO 31 32 1 Y 1 A ALA 32 ? A ALA 32 33 1 Y 1 A THR 33 ? A THR 33 34 1 Y 1 A VAL 34 ? A VAL 34 35 1 Y 1 A ALA 35 ? A ALA 35 36 1 Y 1 A ALA 36 ? A ALA 36 37 1 Y 1 A ALA 37 ? A ALA 37 38 1 Y 1 A LEU 147 ? A LEU 147 39 1 Y 1 A LEU 148 ? A LEU 148 40 1 Y 1 A GLY 149 ? A GLY 149 41 1 Y 1 A GLU 150 ? A GLU 150 42 1 Y 1 A LYS 151 ? A LYS 151 43 1 Y 1 A GLN 152 ? A GLN 152 44 1 Y 1 A GLU 153 ? A GLU 153 45 1 Y 1 A ALA 154 ? A ALA 154 46 1 Y 1 A LYS 155 ? A LYS 155 47 1 Y 1 A GLU 156 ? A GLU 156 48 1 Y 1 A ASN 157 ? A ASN 157 49 1 Y 1 A GLY 158 ? A GLY 158 50 1 Y 1 A THR 159 ? A THR 159 51 1 Y 1 A ASN 160 ? A ASN 160 52 1 Y 1 A LEU 161 ? A LEU 161 53 1 Y 1 A THR 162 ? A THR 162 54 1 Y 1 A PHE 163 ? A PHE 163 55 1 Y 1 A ILE 164 ? A ILE 164 56 1 Y 1 A GLY 165 ? A GLY 165 57 1 Y 1 A ASP 166 ? A ASP 166 58 1 Y 1 A LYS 167 ? A LYS 167 59 1 Y 1 A SER 193 ? A SER 193 60 1 Y 1 A LYS 194 ? A LYS 194 61 1 Y 1 A GLU 195 ? A GLU 195 62 1 Y 1 A SER 196 ? A SER 196 63 1 Y 1 A SER 197 ? A SER 197 64 1 Y 1 A LYS 198 ? A LYS 198 65 1 Y 1 A GLU 199 ? A GLU 199 66 1 Y 1 A ASN 200 ? A ASN 200 67 1 Y 1 A SER 201 ? A SER 201 68 1 Y 1 A LEU 202 ? A LEU 202 69 1 Y 1 A LEU 474 ? A LEU 474 70 1 Y 1 A SER 475 ? A SER 475 71 1 Y 1 A GLU 476 ? A GLU 476 72 1 Y 1 A GLU 477 ? A GLU 477 73 1 Y 1 A GLU 478 ? A GLU 478 74 1 Y 1 A GLU 479 ? A GLU 479 75 1 Y 1 A GLU 480 ? A GLU 480 76 1 Y 1 A ASP 481 ? A ASP 481 77 1 Y 1 A GLU 482 ? A GLU 482 78 1 Y 1 A GLN 483 ? A GLN 483 79 1 Y 1 A LYS 484 ? A LYS 484 80 1 Y 1 A GLU 485 ? A GLU 485 81 1 Y 1 A PRO 486 ? A PRO 486 82 1 Y 1 A MET 487 ? A MET 487 83 1 Y 1 A LEU 488 ? A LEU 488 84 1 Y 1 A LYS 489 ? A LYS 489 85 1 Y 1 A GLU 490 ? A GLU 490 86 1 Y 1 A SER 491 ? A SER 491 87 1 Y 1 A PHE 492 ? A PHE 492 88 1 Y 1 A GLU 493 ? A GLU 493 89 1 Y 1 A GLY 494 ? A GLY 494 90 1 Y 1 A MET 495 ? A MET 495 91 1 Y 1 A LYS 496 ? A LYS 496 92 1 Y 1 A MET 497 ? A MET 497 93 1 Y 1 A ARG 498 ? A ARG 498 94 1 Y 1 A SER 499 ? A SER 499 95 1 Y 1 A THR 500 ? A THR 500 96 1 Y 1 A LYS 501 ? A LYS 501 97 1 Y 1 A GLN 502 ? A GLN 502 98 1 Y 1 A GLU 503 ? A GLU 503 99 1 Y 1 A PRO 504 ? A PRO 504 100 1 Y 1 A ASN 505 ? A ASN 505 101 1 Y 1 A GLY 506 ? A GLY 506 102 1 Y 1 A ASN 507 ? A ASN 507 103 1 Y 1 A SER 508 ? A SER 508 104 1 Y 1 A LYS 509 ? A LYS 509 105 1 Y 1 A VAL 510 ? A VAL 510 106 1 Y 1 A ASN 511 ? A ASN 511 107 1 Y 1 A LYS 512 ? A LYS 512 108 1 Y 1 A ALA 513 ? A ALA 513 109 1 Y 1 A GLN 514 ? A GLN 514 110 1 Y 1 A GLU 515 ? A GLU 515 111 1 Y 1 A ASP 516 ? A ASP 516 112 1 Y 1 A ASP 517 ? A ASP 517 113 1 Y 1 A LEU 518 ? A LEU 518 114 1 Y 1 A LYS 519 ? A LYS 519 115 1 Y 1 A TRP 520 ? A TRP 520 116 1 Y 1 A VAL 521 ? A VAL 521 117 1 Y 1 A GLU 522 ? A GLU 522 118 1 Y 1 A GLU 523 ? A GLU 523 119 1 Y 1 A ASN 524 ? A ASN 524 120 1 Y 1 A VAL 525 ? A VAL 525 121 1 Y 1 A PRO 526 ? A PRO 526 122 1 Y 1 A SER 527 ? A SER 527 123 1 Y 1 A SER 528 ? A SER 528 124 1 Y 1 A VAL 529 ? A VAL 529 125 1 Y 1 A THR 530 ? A THR 530 126 1 Y 1 A ASP 531 ? A ASP 531 127 1 Y 1 A VAL 532 ? A VAL 532 128 1 Y 1 A ALA 533 ? A ALA 533 129 1 Y 1 A LEU 534 ? A LEU 534 130 1 Y 1 A PRO 535 ? A PRO 535 131 1 Y 1 A ALA 536 ? A ALA 536 132 1 Y 1 A LEU 537 ? A LEU 537 133 1 Y 1 A LEU 538 ? A LEU 538 134 1 Y 1 A ASP 539 ? A ASP 539 135 1 Y 1 A SER 540 ? A SER 540 136 1 Y 1 A ASP 541 ? A ASP 541 137 1 Y 1 A GLU 542 ? A GLU 542 138 1 Y 1 A GLU 543 ? A GLU 543 139 1 Y 1 A ARG 544 ? A ARG 544 140 1 Y 1 A MET 545 ? A MET 545 141 1 Y 1 A ILE 546 ? A ILE 546 142 1 Y 1 A THR 547 ? A THR 547 143 1 Y 1 A HIS 548 ? A HIS 548 144 1 Y 1 A PHE 549 ? A PHE 549 145 1 Y 1 A GLU 550 ? A GLU 550 146 1 Y 1 A ARG 551 ? A ARG 551 147 1 Y 1 A SER 552 ? A SER 552 148 1 Y 1 A LYS 553 ? A LYS 553 149 1 Y 1 A MET 554 ? A MET 554 150 1 Y 1 A GLU 555 ? A GLU 555 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CLR C1 C N N 98 CLR C2 C N N 99 CLR C3 C N S 100 CLR C4 C N N 101 CLR C5 C N N 102 CLR C6 C N N 103 CLR C7 C N N 104 CLR C8 C N S 105 CLR C9 C N S 106 CLR C10 C N R 107 CLR C11 C N N 108 CLR C12 C N N 109 CLR C13 C N R 110 CLR C14 C N S 111 CLR C15 C N N 112 CLR C16 C N N 113 CLR C17 C N R 114 CLR C18 C N N 115 CLR C19 C N N 116 CLR C20 C N R 117 CLR C21 C N N 118 CLR C22 C N N 119 CLR C23 C N N 120 CLR C24 C N N 121 CLR C25 C N N 122 CLR C26 C N N 123 CLR C27 C N N 124 CLR O1 O N N 125 CLR H11 H N N 126 CLR H12 H N N 127 CLR H21 H N N 128 CLR H22 H N N 129 CLR H3 H N N 130 CLR H41 H N N 131 CLR H42 H N N 132 CLR H6 H N N 133 CLR H71 H N N 134 CLR H72 H N N 135 CLR H8 H N N 136 CLR H9 H N N 137 CLR H111 H N N 138 CLR H112 H N N 139 CLR H121 H N N 140 CLR H122 H N N 141 CLR H14 H N N 142 CLR H151 H N N 143 CLR H152 H N N 144 CLR H161 H N N 145 CLR H162 H N N 146 CLR H17 H N N 147 CLR H181 H N N 148 CLR H182 H N N 149 CLR H183 H N N 150 CLR H191 H N N 151 CLR H192 H N N 152 CLR H193 H N N 153 CLR H20 H N N 154 CLR H211 H N N 155 CLR H212 H N N 156 CLR H213 H N N 157 CLR H221 H N N 158 CLR H222 H N N 159 CLR H231 H N N 160 CLR H232 H N N 161 CLR H241 H N N 162 CLR H242 H N N 163 CLR H25 H N N 164 CLR H261 H N N 165 CLR H262 H N N 166 CLR H263 H N N 167 CLR H271 H N N 168 CLR H272 H N N 169 CLR H273 H N N 170 CLR H1 H N N 171 CYS N N N N 172 CYS CA C N R 173 CYS C C N N 174 CYS O O N N 175 CYS CB C N N 176 CYS SG S N N 177 CYS OXT O N N 178 CYS H H N N 179 CYS H2 H N N 180 CYS HA H N N 181 CYS HB2 H N N 182 CYS HB3 H N N 183 CYS HG H N N 184 CYS HXT H N N 185 GLN N N N N 186 GLN CA C N S 187 GLN C C N N 188 GLN O O N N 189 GLN CB C N N 190 GLN CG C N N 191 GLN CD C N N 192 GLN OE1 O N N 193 GLN NE2 N N N 194 GLN OXT O N N 195 GLN H H N N 196 GLN H2 H N N 197 GLN HA H N N 198 GLN HB2 H N N 199 GLN HB3 H N N 200 GLN HG2 H N N 201 GLN HG3 H N N 202 GLN HE21 H N N 203 GLN HE22 H N N 204 GLN HXT H N N 205 GLU N N N N 206 GLU CA C N S 207 GLU C C N N 208 GLU O O N N 209 GLU CB C N N 210 GLU CG C N N 211 GLU CD C N N 212 GLU OE1 O N N 213 GLU OE2 O N N 214 GLU OXT O N N 215 GLU H H N N 216 GLU H2 H N N 217 GLU HA H N N 218 GLU HB2 H N N 219 GLU HB3 H N N 220 GLU HG2 H N N 221 GLU HG3 H N N 222 GLU HE2 H N N 223 GLU HXT H N N 224 GLY N N N N 225 GLY CA C N N 226 GLY C C N N 227 GLY O O N N 228 GLY OXT O N N 229 GLY H H N N 230 GLY H2 H N N 231 GLY HA2 H N N 232 GLY HA3 H N N 233 GLY HXT H N N 234 HIS N N N N 235 HIS CA C N S 236 HIS C C N N 237 HIS O O N N 238 HIS CB C N N 239 HIS CG C Y N 240 HIS ND1 N Y N 241 HIS CD2 C Y N 242 HIS CE1 C Y N 243 HIS NE2 N Y N 244 HIS OXT O N N 245 HIS H H N N 246 HIS H2 H N N 247 HIS HA H N N 248 HIS HB2 H N N 249 HIS HB3 H N N 250 HIS HD1 H N N 251 HIS HD2 H N N 252 HIS HE1 H N N 253 HIS HE2 H N N 254 HIS HXT H N N 255 ILE N N N N 256 ILE CA C N S 257 ILE C C N N 258 ILE O O N N 259 ILE CB C N S 260 ILE CG1 C N N 261 ILE CG2 C N N 262 ILE CD1 C N N 263 ILE OXT O N N 264 ILE H H N N 265 ILE H2 H N N 266 ILE HA H N N 267 ILE HB H N N 268 ILE HG12 H N N 269 ILE HG13 H N N 270 ILE HG21 H N N 271 ILE HG22 H N N 272 ILE HG23 H N N 273 ILE HD11 H N N 274 ILE HD12 H N N 275 ILE HD13 H N N 276 ILE HXT H N N 277 L9Q N N N N 278 L9Q P P N N 279 L9Q C1 C N N 280 L9Q C2 C N S 281 L9Q O2 O N N 282 L9Q C3 C N N 283 L9Q O3 O N N 284 L9Q C4 C N N 285 L9Q C5 C N N 286 L9Q C11 C N N 287 L9Q O11 O N N 288 L9Q C12 C N N 289 L9Q C13 C N N 290 L9Q C14 C N N 291 L9Q C15 C N N 292 L9Q C16 C N N 293 L9Q C17 C N N 294 L9Q C18 C N N 295 L9Q C19 C N N 296 L9Q O1P O N N 297 L9Q C20 C N N 298 L9Q C21 C N N 299 L9Q C22 C N N 300 L9Q C23 C N N 301 L9Q C24 C N N 302 L9Q C25 C N N 303 L9Q C26 C N N 304 L9Q C27 C N N 305 L9Q C28 C N N 306 L9Q O2P O N N 307 L9Q C31 C N N 308 L9Q O31 O N N 309 L9Q C32 C N N 310 L9Q C33 C N N 311 L9Q C34 C N N 312 L9Q C35 C N N 313 L9Q C36 C N N 314 L9Q C37 C N N 315 L9Q C38 C N N 316 L9Q C39 C N N 317 L9Q O3P O N N 318 L9Q C40 C N N 319 L9Q C41 C N N 320 L9Q C42 C N N 321 L9Q C43 C N N 322 L9Q C44 C N N 323 L9Q C45 C N N 324 L9Q C46 C N N 325 L9Q C47 C N N 326 L9Q C48 C N N 327 L9Q O4P O N N 328 L9Q HN H N N 329 L9Q HNA H N N 330 L9Q H1 H N N 331 L9Q H1A H N N 332 L9Q H2 H N N 333 L9Q H3 H N N 334 L9Q H3A H N N 335 L9Q H4 H N N 336 L9Q H4A H N N 337 L9Q H5 H N N 338 L9Q H5A H N N 339 L9Q H12 H N N 340 L9Q H12A H N N 341 L9Q H13 H N N 342 L9Q H13A H N N 343 L9Q H14 H N N 344 L9Q H14A H N N 345 L9Q H15 H N N 346 L9Q H15A H N N 347 L9Q H16 H N N 348 L9Q H16A H N N 349 L9Q H17 H N N 350 L9Q H17A H N N 351 L9Q H18 H N N 352 L9Q H18A H N N 353 L9Q H19 H N N 354 L9Q H19A H N N 355 L9Q H20 H N N 356 L9Q H20A H N N 357 L9Q H21 H N N 358 L9Q H21A H N N 359 L9Q H22 H N N 360 L9Q H22A H N N 361 L9Q H23 H N N 362 L9Q H23A H N N 363 L9Q H24 H N N 364 L9Q H24A H N N 365 L9Q H25 H N N 366 L9Q H25A H N N 367 L9Q H26 H N N 368 L9Q H26A H N N 369 L9Q H27 H N N 370 L9Q H27A H N N 371 L9Q H28 H N N 372 L9Q H28A H N N 373 L9Q H28B H N N 374 L9Q HO2P H N N 375 L9Q H32 H N N 376 L9Q H32A H N N 377 L9Q H33 H N N 378 L9Q H33A H N N 379 L9Q H34 H N N 380 L9Q H34A H N N 381 L9Q H35 H N N 382 L9Q H35A H N N 383 L9Q H36 H N N 384 L9Q H36A H N N 385 L9Q H37 H N N 386 L9Q H37A H N N 387 L9Q H38 H N N 388 L9Q H38A H N N 389 L9Q H39 H N N 390 L9Q H40 H N N 391 L9Q H41 H N N 392 L9Q H41A H N N 393 L9Q H42 H N N 394 L9Q H42A H N N 395 L9Q H43 H N N 396 L9Q H43A H N N 397 L9Q H44 H N N 398 L9Q H44A H N N 399 L9Q H45 H N N 400 L9Q H45A H N N 401 L9Q H46 H N N 402 L9Q H46A H N N 403 L9Q H47 H N N 404 L9Q H47A H N N 405 L9Q H48 H N N 406 L9Q H48A H N N 407 L9Q H48B H N N 408 LEU N N N N 409 LEU CA C N S 410 LEU C C N N 411 LEU O O N N 412 LEU CB C N N 413 LEU CG C N N 414 LEU CD1 C N N 415 LEU CD2 C N N 416 LEU OXT O N N 417 LEU H H N N 418 LEU H2 H N N 419 LEU HA H N N 420 LEU HB2 H N N 421 LEU HB3 H N N 422 LEU HG H N N 423 LEU HD11 H N N 424 LEU HD12 H N N 425 LEU HD13 H N N 426 LEU HD21 H N N 427 LEU HD22 H N N 428 LEU HD23 H N N 429 LEU HXT H N N 430 LYS N N N N 431 LYS CA C N S 432 LYS C C N N 433 LYS O O N N 434 LYS CB C N N 435 LYS CG C N N 436 LYS CD C N N 437 LYS CE C N N 438 LYS NZ N N N 439 LYS OXT O N N 440 LYS H H N N 441 LYS H2 H N N 442 LYS HA H N N 443 LYS HB2 H N N 444 LYS HB3 H N N 445 LYS HG2 H N N 446 LYS HG3 H N N 447 LYS HD2 H N N 448 LYS HD3 H N N 449 LYS HE2 H N N 450 LYS HE3 H N N 451 LYS HZ1 H N N 452 LYS HZ2 H N N 453 LYS HZ3 H N N 454 LYS HXT H N N 455 MET N N N N 456 MET CA C N S 457 MET C C N N 458 MET O O N N 459 MET CB C N N 460 MET CG C N N 461 MET SD S N N 462 MET CE C N N 463 MET OXT O N N 464 MET H H N N 465 MET H2 H N N 466 MET HA H N N 467 MET HB2 H N N 468 MET HB3 H N N 469 MET HG2 H N N 470 MET HG3 H N N 471 MET HE1 H N N 472 MET HE2 H N N 473 MET HE3 H N N 474 MET HXT H N N 475 NAG C1 C N R 476 NAG C2 C N R 477 NAG C3 C N R 478 NAG C4 C N S 479 NAG C5 C N R 480 NAG C6 C N N 481 NAG C7 C N N 482 NAG C8 C N N 483 NAG N2 N N N 484 NAG O1 O N N 485 NAG O3 O N N 486 NAG O4 O N N 487 NAG O5 O N N 488 NAG O6 O N N 489 NAG O7 O N N 490 NAG H1 H N N 491 NAG H2 H N N 492 NAG H3 H N N 493 NAG H4 H N N 494 NAG H5 H N N 495 NAG H61 H N N 496 NAG H62 H N N 497 NAG H81 H N N 498 NAG H82 H N N 499 NAG H83 H N N 500 NAG HN2 H N N 501 NAG HO1 H N N 502 NAG HO3 H N N 503 NAG HO4 H N N 504 NAG HO6 H N N 505 PHE N N N N 506 PHE CA C N S 507 PHE C C N N 508 PHE O O N N 509 PHE CB C N N 510 PHE CG C Y N 511 PHE CD1 C Y N 512 PHE CD2 C Y N 513 PHE CE1 C Y N 514 PHE CE2 C Y N 515 PHE CZ C Y N 516 PHE OXT O N N 517 PHE H H N N 518 PHE H2 H N N 519 PHE HA H N N 520 PHE HB2 H N N 521 PHE HB3 H N N 522 PHE HD1 H N N 523 PHE HD2 H N N 524 PHE HE1 H N N 525 PHE HE2 H N N 526 PHE HZ H N N 527 PHE HXT H N N 528 PRO N N N N 529 PRO CA C N S 530 PRO C C N N 531 PRO O O N N 532 PRO CB C N N 533 PRO CG C N N 534 PRO CD C N N 535 PRO OXT O N N 536 PRO H H N N 537 PRO HA H N N 538 PRO HB2 H N N 539 PRO HB3 H N N 540 PRO HG2 H N N 541 PRO HG3 H N N 542 PRO HD2 H N N 543 PRO HD3 H N N 544 PRO HXT H N N 545 SER N N N N 546 SER CA C N S 547 SER C C N N 548 SER O O N N 549 SER CB C N N 550 SER OG O N N 551 SER OXT O N N 552 SER H H N N 553 SER H2 H N N 554 SER HA H N N 555 SER HB2 H N N 556 SER HB3 H N N 557 SER HG H N N 558 SER HXT H N N 559 THR N N N N 560 THR CA C N S 561 THR C C N N 562 THR O O N N 563 THR CB C N R 564 THR OG1 O N N 565 THR CG2 C N N 566 THR OXT O N N 567 THR H H N N 568 THR H2 H N N 569 THR HA H N N 570 THR HB H N N 571 THR HG1 H N N 572 THR HG21 H N N 573 THR HG22 H N N 574 THR HG23 H N N 575 THR HXT H N N 576 TRP N N N N 577 TRP CA C N S 578 TRP C C N N 579 TRP O O N N 580 TRP CB C N N 581 TRP CG C Y N 582 TRP CD1 C Y N 583 TRP CD2 C Y N 584 TRP NE1 N Y N 585 TRP CE2 C Y N 586 TRP CE3 C Y N 587 TRP CZ2 C Y N 588 TRP CZ3 C Y N 589 TRP CH2 C Y N 590 TRP OXT O N N 591 TRP H H N N 592 TRP H2 H N N 593 TRP HA H N N 594 TRP HB2 H N N 595 TRP HB3 H N N 596 TRP HD1 H N N 597 TRP HE1 H N N 598 TRP HE3 H N N 599 TRP HZ2 H N N 600 TRP HZ3 H N N 601 TRP HH2 H N N 602 TRP HXT H N N 603 TYR N N N N 604 TYR CA C N S 605 TYR C C N N 606 TYR O O N N 607 TYR CB C N N 608 TYR CG C Y N 609 TYR CD1 C Y N 610 TYR CD2 C Y N 611 TYR CE1 C Y N 612 TYR CE2 C Y N 613 TYR CZ C Y N 614 TYR OH O N N 615 TYR OXT O N N 616 TYR H H N N 617 TYR H2 H N N 618 TYR HA H N N 619 TYR HB2 H N N 620 TYR HB3 H N N 621 TYR HD1 H N N 622 TYR HD2 H N N 623 TYR HE1 H N N 624 TYR HE2 H N N 625 TYR HH H N N 626 TYR HXT H N N 627 VAL N N N N 628 VAL CA C N S 629 VAL C C N N 630 VAL O O N N 631 VAL CB C N N 632 VAL CG1 C N N 633 VAL CG2 C N N 634 VAL OXT O N N 635 VAL H H N N 636 VAL H2 H N N 637 VAL HA H N N 638 VAL HB H N N 639 VAL HG11 H N N 640 VAL HG12 H N N 641 VAL HG13 H N N 642 VAL HG21 H N N 643 VAL HG22 H N N 644 VAL HG23 H N N 645 VAL HXT H N N 646 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CLR C1 C2 sing N N 94 CLR C1 C10 sing N N 95 CLR C1 H11 sing N N 96 CLR C1 H12 sing N N 97 CLR C2 C3 sing N N 98 CLR C2 H21 sing N N 99 CLR C2 H22 sing N N 100 CLR C3 C4 sing N N 101 CLR C3 O1 sing N N 102 CLR C3 H3 sing N N 103 CLR C4 C5 sing N N 104 CLR C4 H41 sing N N 105 CLR C4 H42 sing N N 106 CLR C5 C6 doub N N 107 CLR C5 C10 sing N N 108 CLR C6 C7 sing N N 109 CLR C6 H6 sing N N 110 CLR C7 C8 sing N N 111 CLR C7 H71 sing N N 112 CLR C7 H72 sing N N 113 CLR C8 C9 sing N N 114 CLR C8 C14 sing N N 115 CLR C8 H8 sing N N 116 CLR C9 C10 sing N N 117 CLR C9 C11 sing N N 118 CLR C9 H9 sing N N 119 CLR C10 C19 sing N N 120 CLR C11 C12 sing N N 121 CLR C11 H111 sing N N 122 CLR C11 H112 sing N N 123 CLR C12 C13 sing N N 124 CLR C12 H121 sing N N 125 CLR C12 H122 sing N N 126 CLR C13 C14 sing N N 127 CLR C13 C17 sing N N 128 CLR C13 C18 sing N N 129 CLR C14 C15 sing N N 130 CLR C14 H14 sing N N 131 CLR C15 C16 sing N N 132 CLR C15 H151 sing N N 133 CLR C15 H152 sing N N 134 CLR C16 C17 sing N N 135 CLR C16 H161 sing N N 136 CLR C16 H162 sing N N 137 CLR C17 C20 sing N N 138 CLR C17 H17 sing N N 139 CLR C18 H181 sing N N 140 CLR C18 H182 sing N N 141 CLR C18 H183 sing N N 142 CLR C19 H191 sing N N 143 CLR C19 H192 sing N N 144 CLR C19 H193 sing N N 145 CLR C20 C21 sing N N 146 CLR C20 C22 sing N N 147 CLR C20 H20 sing N N 148 CLR C21 H211 sing N N 149 CLR C21 H212 sing N N 150 CLR C21 H213 sing N N 151 CLR C22 C23 sing N N 152 CLR C22 H221 sing N N 153 CLR C22 H222 sing N N 154 CLR C23 C24 sing N N 155 CLR C23 H231 sing N N 156 CLR C23 H232 sing N N 157 CLR C24 C25 sing N N 158 CLR C24 H241 sing N N 159 CLR C24 H242 sing N N 160 CLR C25 C26 sing N N 161 CLR C25 C27 sing N N 162 CLR C25 H25 sing N N 163 CLR C26 H261 sing N N 164 CLR C26 H262 sing N N 165 CLR C26 H263 sing N N 166 CLR C27 H271 sing N N 167 CLR C27 H272 sing N N 168 CLR C27 H273 sing N N 169 CLR O1 H1 sing N N 170 CYS N CA sing N N 171 CYS N H sing N N 172 CYS N H2 sing N N 173 CYS CA C sing N N 174 CYS CA CB sing N N 175 CYS CA HA sing N N 176 CYS C O doub N N 177 CYS C OXT sing N N 178 CYS CB SG sing N N 179 CYS CB HB2 sing N N 180 CYS CB HB3 sing N N 181 CYS SG HG sing N N 182 CYS OXT HXT sing N N 183 GLN N CA sing N N 184 GLN N H sing N N 185 GLN N H2 sing N N 186 GLN CA C sing N N 187 GLN CA CB sing N N 188 GLN CA HA sing N N 189 GLN C O doub N N 190 GLN C OXT sing N N 191 GLN CB CG sing N N 192 GLN CB HB2 sing N N 193 GLN CB HB3 sing N N 194 GLN CG CD sing N N 195 GLN CG HG2 sing N N 196 GLN CG HG3 sing N N 197 GLN CD OE1 doub N N 198 GLN CD NE2 sing N N 199 GLN NE2 HE21 sing N N 200 GLN NE2 HE22 sing N N 201 GLN OXT HXT sing N N 202 GLU N CA sing N N 203 GLU N H sing N N 204 GLU N H2 sing N N 205 GLU CA C sing N N 206 GLU CA CB sing N N 207 GLU CA HA sing N N 208 GLU C O doub N N 209 GLU C OXT sing N N 210 GLU CB CG sing N N 211 GLU CB HB2 sing N N 212 GLU CB HB3 sing N N 213 GLU CG CD sing N N 214 GLU CG HG2 sing N N 215 GLU CG HG3 sing N N 216 GLU CD OE1 doub N N 217 GLU CD OE2 sing N N 218 GLU OE2 HE2 sing N N 219 GLU OXT HXT sing N N 220 GLY N CA sing N N 221 GLY N H sing N N 222 GLY N H2 sing N N 223 GLY CA C sing N N 224 GLY CA HA2 sing N N 225 GLY CA HA3 sing N N 226 GLY C O doub N N 227 GLY C OXT sing N N 228 GLY OXT HXT sing N N 229 HIS N CA sing N N 230 HIS N H sing N N 231 HIS N H2 sing N N 232 HIS CA C sing N N 233 HIS CA CB sing N N 234 HIS CA HA sing N N 235 HIS C O doub N N 236 HIS C OXT sing N N 237 HIS CB CG sing N N 238 HIS CB HB2 sing N N 239 HIS CB HB3 sing N N 240 HIS CG ND1 sing Y N 241 HIS CG CD2 doub Y N 242 HIS ND1 CE1 doub Y N 243 HIS ND1 HD1 sing N N 244 HIS CD2 NE2 sing Y N 245 HIS CD2 HD2 sing N N 246 HIS CE1 NE2 sing Y N 247 HIS CE1 HE1 sing N N 248 HIS NE2 HE2 sing N N 249 HIS OXT HXT sing N N 250 ILE N CA sing N N 251 ILE N H sing N N 252 ILE N H2 sing N N 253 ILE CA C sing N N 254 ILE CA CB sing N N 255 ILE CA HA sing N N 256 ILE C O doub N N 257 ILE C OXT sing N N 258 ILE CB CG1 sing N N 259 ILE CB CG2 sing N N 260 ILE CB HB sing N N 261 ILE CG1 CD1 sing N N 262 ILE CG1 HG12 sing N N 263 ILE CG1 HG13 sing N N 264 ILE CG2 HG21 sing N N 265 ILE CG2 HG22 sing N N 266 ILE CG2 HG23 sing N N 267 ILE CD1 HD11 sing N N 268 ILE CD1 HD12 sing N N 269 ILE CD1 HD13 sing N N 270 ILE OXT HXT sing N N 271 L9Q C5 N sing N N 272 L9Q N HN sing N N 273 L9Q N HNA sing N N 274 L9Q O3P P sing N N 275 L9Q O1P P doub N N 276 L9Q P O2P sing N N 277 L9Q P O4P sing N N 278 L9Q C2 C1 sing N N 279 L9Q O3P C1 sing N N 280 L9Q C1 H1 sing N N 281 L9Q C1 H1A sing N N 282 L9Q C3 C2 sing N N 283 L9Q C2 O2 sing N N 284 L9Q C2 H2 sing N N 285 L9Q C31 O2 sing N N 286 L9Q O3 C3 sing N N 287 L9Q C3 H3 sing N N 288 L9Q C3 H3A sing N N 289 L9Q C11 O3 sing N N 290 L9Q O4P C4 sing N N 291 L9Q C4 C5 sing N N 292 L9Q C4 H4 sing N N 293 L9Q C4 H4A sing N N 294 L9Q C5 H5 sing N N 295 L9Q C5 H5A sing N N 296 L9Q C12 C11 sing N N 297 L9Q O11 C11 doub N N 298 L9Q C12 C13 sing N N 299 L9Q C12 H12 sing N N 300 L9Q C12 H12A sing N N 301 L9Q C14 C13 sing N N 302 L9Q C13 H13 sing N N 303 L9Q C13 H13A sing N N 304 L9Q C15 C14 sing N N 305 L9Q C14 H14 sing N N 306 L9Q C14 H14A sing N N 307 L9Q C16 C15 sing N N 308 L9Q C15 H15 sing N N 309 L9Q C15 H15A sing N N 310 L9Q C16 C17 sing N N 311 L9Q C16 H16 sing N N 312 L9Q C16 H16A sing N N 313 L9Q C17 C18 sing N N 314 L9Q C17 H17 sing N N 315 L9Q C17 H17A sing N N 316 L9Q C19 C18 sing N N 317 L9Q C18 H18 sing N N 318 L9Q C18 H18A sing N N 319 L9Q C19 C20 sing N N 320 L9Q C19 H19 sing N N 321 L9Q C19 H19A sing N N 322 L9Q C21 C20 sing N N 323 L9Q C20 H20 sing N N 324 L9Q C20 H20A sing N N 325 L9Q C21 C22 sing N N 326 L9Q C21 H21 sing N N 327 L9Q C21 H21A sing N N 328 L9Q C23 C22 sing N N 329 L9Q C22 H22 sing N N 330 L9Q C22 H22A sing N N 331 L9Q C23 C24 sing N N 332 L9Q C23 H23 sing N N 333 L9Q C23 H23A sing N N 334 L9Q C25 C24 sing N N 335 L9Q C24 H24 sing N N 336 L9Q C24 H24A sing N N 337 L9Q C25 C26 sing N N 338 L9Q C25 H25 sing N N 339 L9Q C25 H25A sing N N 340 L9Q C27 C26 sing N N 341 L9Q C26 H26 sing N N 342 L9Q C26 H26A sing N N 343 L9Q C28 C27 sing N N 344 L9Q C27 H27 sing N N 345 L9Q C27 H27A sing N N 346 L9Q C28 H28 sing N N 347 L9Q C28 H28A sing N N 348 L9Q C28 H28B sing N N 349 L9Q O2P HO2P sing N N 350 L9Q C32 C31 sing N N 351 L9Q C31 O31 doub N N 352 L9Q C32 C33 sing N N 353 L9Q C32 H32 sing N N 354 L9Q C32 H32A sing N N 355 L9Q C34 C33 sing N N 356 L9Q C33 H33 sing N N 357 L9Q C33 H33A sing N N 358 L9Q C34 C35 sing N N 359 L9Q C34 H34 sing N N 360 L9Q C34 H34A sing N N 361 L9Q C36 C35 sing N N 362 L9Q C35 H35 sing N N 363 L9Q C35 H35A sing N N 364 L9Q C36 C37 sing N N 365 L9Q C36 H36 sing N N 366 L9Q C36 H36A sing N N 367 L9Q C38 C37 sing N N 368 L9Q C37 H37 sing N N 369 L9Q C37 H37A sing N N 370 L9Q C39 C38 sing N Z 371 L9Q C38 H38 sing N N 372 L9Q C38 H38A sing N N 373 L9Q C39 C40 doub N N 374 L9Q C39 H39 sing N N 375 L9Q C40 C41 sing N N 376 L9Q C40 H40 sing N N 377 L9Q C41 C42 sing N N 378 L9Q C41 H41 sing N N 379 L9Q C41 H41A sing N N 380 L9Q C42 C43 sing N N 381 L9Q C42 H42 sing N N 382 L9Q C42 H42A sing N N 383 L9Q C43 C44 sing N N 384 L9Q C43 H43 sing N N 385 L9Q C43 H43A sing N N 386 L9Q C44 C45 sing N N 387 L9Q C44 H44 sing N N 388 L9Q C44 H44A sing N N 389 L9Q C45 C46 sing N N 390 L9Q C45 H45 sing N N 391 L9Q C45 H45A sing N N 392 L9Q C46 C47 sing N N 393 L9Q C46 H46 sing N N 394 L9Q C46 H46A sing N N 395 L9Q C47 C48 sing N N 396 L9Q C47 H47 sing N N 397 L9Q C47 H47A sing N N 398 L9Q C48 H48 sing N N 399 L9Q C48 H48A sing N N 400 L9Q C48 H48B sing N N 401 LEU N CA sing N N 402 LEU N H sing N N 403 LEU N H2 sing N N 404 LEU CA C sing N N 405 LEU CA CB sing N N 406 LEU CA HA sing N N 407 LEU C O doub N N 408 LEU C OXT sing N N 409 LEU CB CG sing N N 410 LEU CB HB2 sing N N 411 LEU CB HB3 sing N N 412 LEU CG CD1 sing N N 413 LEU CG CD2 sing N N 414 LEU CG HG sing N N 415 LEU CD1 HD11 sing N N 416 LEU CD1 HD12 sing N N 417 LEU CD1 HD13 sing N N 418 LEU CD2 HD21 sing N N 419 LEU CD2 HD22 sing N N 420 LEU CD2 HD23 sing N N 421 LEU OXT HXT sing N N 422 LYS N CA sing N N 423 LYS N H sing N N 424 LYS N H2 sing N N 425 LYS CA C sing N N 426 LYS CA CB sing N N 427 LYS CA HA sing N N 428 LYS C O doub N N 429 LYS C OXT sing N N 430 LYS CB CG sing N N 431 LYS CB HB2 sing N N 432 LYS CB HB3 sing N N 433 LYS CG CD sing N N 434 LYS CG HG2 sing N N 435 LYS CG HG3 sing N N 436 LYS CD CE sing N N 437 LYS CD HD2 sing N N 438 LYS CD HD3 sing N N 439 LYS CE NZ sing N N 440 LYS CE HE2 sing N N 441 LYS CE HE3 sing N N 442 LYS NZ HZ1 sing N N 443 LYS NZ HZ2 sing N N 444 LYS NZ HZ3 sing N N 445 LYS OXT HXT sing N N 446 MET N CA sing N N 447 MET N H sing N N 448 MET N H2 sing N N 449 MET CA C sing N N 450 MET CA CB sing N N 451 MET CA HA sing N N 452 MET C O doub N N 453 MET C OXT sing N N 454 MET CB CG sing N N 455 MET CB HB2 sing N N 456 MET CB HB3 sing N N 457 MET CG SD sing N N 458 MET CG HG2 sing N N 459 MET CG HG3 sing N N 460 MET SD CE sing N N 461 MET CE HE1 sing N N 462 MET CE HE2 sing N N 463 MET CE HE3 sing N N 464 MET OXT HXT sing N N 465 NAG C1 C2 sing N N 466 NAG C1 O1 sing N N 467 NAG C1 O5 sing N N 468 NAG C1 H1 sing N N 469 NAG C2 C3 sing N N 470 NAG C2 N2 sing N N 471 NAG C2 H2 sing N N 472 NAG C3 C4 sing N N 473 NAG C3 O3 sing N N 474 NAG C3 H3 sing N N 475 NAG C4 C5 sing N N 476 NAG C4 O4 sing N N 477 NAG C4 H4 sing N N 478 NAG C5 C6 sing N N 479 NAG C5 O5 sing N N 480 NAG C5 H5 sing N N 481 NAG C6 O6 sing N N 482 NAG C6 H61 sing N N 483 NAG C6 H62 sing N N 484 NAG C7 C8 sing N N 485 NAG C7 N2 sing N N 486 NAG C7 O7 doub N N 487 NAG C8 H81 sing N N 488 NAG C8 H82 sing N N 489 NAG C8 H83 sing N N 490 NAG N2 HN2 sing N N 491 NAG O1 HO1 sing N N 492 NAG O3 HO3 sing N N 493 NAG O4 HO4 sing N N 494 NAG O6 HO6 sing N N 495 PHE N CA sing N N 496 PHE N H sing N N 497 PHE N H2 sing N N 498 PHE CA C sing N N 499 PHE CA CB sing N N 500 PHE CA HA sing N N 501 PHE C O doub N N 502 PHE C OXT sing N N 503 PHE CB CG sing N N 504 PHE CB HB2 sing N N 505 PHE CB HB3 sing N N 506 PHE CG CD1 doub Y N 507 PHE CG CD2 sing Y N 508 PHE CD1 CE1 sing Y N 509 PHE CD1 HD1 sing N N 510 PHE CD2 CE2 doub Y N 511 PHE CD2 HD2 sing N N 512 PHE CE1 CZ doub Y N 513 PHE CE1 HE1 sing N N 514 PHE CE2 CZ sing Y N 515 PHE CE2 HE2 sing N N 516 PHE CZ HZ sing N N 517 PHE OXT HXT sing N N 518 PRO N CA sing N N 519 PRO N CD sing N N 520 PRO N H sing N N 521 PRO CA C sing N N 522 PRO CA CB sing N N 523 PRO CA HA sing N N 524 PRO C O doub N N 525 PRO C OXT sing N N 526 PRO CB CG sing N N 527 PRO CB HB2 sing N N 528 PRO CB HB3 sing N N 529 PRO CG CD sing N N 530 PRO CG HG2 sing N N 531 PRO CG HG3 sing N N 532 PRO CD HD2 sing N N 533 PRO CD HD3 sing N N 534 PRO OXT HXT sing N N 535 SER N CA sing N N 536 SER N H sing N N 537 SER N H2 sing N N 538 SER CA C sing N N 539 SER CA CB sing N N 540 SER CA HA sing N N 541 SER C O doub N N 542 SER C OXT sing N N 543 SER CB OG sing N N 544 SER CB HB2 sing N N 545 SER CB HB3 sing N N 546 SER OG HG sing N N 547 SER OXT HXT sing N N 548 THR N CA sing N N 549 THR N H sing N N 550 THR N H2 sing N N 551 THR CA C sing N N 552 THR CA CB sing N N 553 THR CA HA sing N N 554 THR C O doub N N 555 THR C OXT sing N N 556 THR CB OG1 sing N N 557 THR CB CG2 sing N N 558 THR CB HB sing N N 559 THR OG1 HG1 sing N N 560 THR CG2 HG21 sing N N 561 THR CG2 HG22 sing N N 562 THR CG2 HG23 sing N N 563 THR OXT HXT sing N N 564 TRP N CA sing N N 565 TRP N H sing N N 566 TRP N H2 sing N N 567 TRP CA C sing N N 568 TRP CA CB sing N N 569 TRP CA HA sing N N 570 TRP C O doub N N 571 TRP C OXT sing N N 572 TRP CB CG sing N N 573 TRP CB HB2 sing N N 574 TRP CB HB3 sing N N 575 TRP CG CD1 doub Y N 576 TRP CG CD2 sing Y N 577 TRP CD1 NE1 sing Y N 578 TRP CD1 HD1 sing N N 579 TRP CD2 CE2 doub Y N 580 TRP CD2 CE3 sing Y N 581 TRP NE1 CE2 sing Y N 582 TRP NE1 HE1 sing N N 583 TRP CE2 CZ2 sing Y N 584 TRP CE3 CZ3 doub Y N 585 TRP CE3 HE3 sing N N 586 TRP CZ2 CH2 doub Y N 587 TRP CZ2 HZ2 sing N N 588 TRP CZ3 CH2 sing Y N 589 TRP CZ3 HZ3 sing N N 590 TRP CH2 HH2 sing N N 591 TRP OXT HXT sing N N 592 TYR N CA sing N N 593 TYR N H sing N N 594 TYR N H2 sing N N 595 TYR CA C sing N N 596 TYR CA CB sing N N 597 TYR CA HA sing N N 598 TYR C O doub N N 599 TYR C OXT sing N N 600 TYR CB CG sing N N 601 TYR CB HB2 sing N N 602 TYR CB HB3 sing N N 603 TYR CG CD1 doub Y N 604 TYR CG CD2 sing Y N 605 TYR CD1 CE1 sing Y N 606 TYR CD1 HD1 sing N N 607 TYR CD2 CE2 doub Y N 608 TYR CD2 HD2 sing N N 609 TYR CE1 CZ doub Y N 610 TYR CE1 HE1 sing N N 611 TYR CE2 CZ sing Y N 612 TYR CE2 HE2 sing N N 613 TYR CZ OH sing N N 614 TYR OH HH sing N N 615 TYR OXT HXT sing N N 616 VAL N CA sing N N 617 VAL N H sing N N 618 VAL N H2 sing N N 619 VAL CA C sing N N 620 VAL CA CB sing N N 621 VAL CA HA sing N N 622 VAL C O doub N N 623 VAL C OXT sing N N 624 VAL CB CG1 sing N N 625 VAL CB CG2 sing N N 626 VAL CB HB sing N N 627 VAL CG1 HG11 sing N N 628 VAL CG1 HG12 sing N N 629 VAL CG1 HG13 sing N N 630 VAL CG2 HG21 sing N N 631 VAL CG2 HG22 sing N N 632 VAL CG2 HG23 sing N N 633 VAL OXT HXT sing N N 634 # _em_admin.current_status REL _em_admin.deposition_date 2022-12-19 _em_admin.deposition_site PDBJ _em_admin.entry_id 8HSI _em_admin.last_update 2024-11-13 _em_admin.map_release_date 2023-12-27 _em_admin.title 'Cryo-EM structure of human TMEM87A, PE-bound' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 50 mM Tris 1 trisaminomethane 1 250 mM NaCl 2 'Sodium Chloride' 1 0.01 '% (w/v)' DDM 3 Dodecylmaltoside 1 0.002 '% (w/v)' CHS 4 'Cholesteryl hemisuccinate' # _em_ctf_correction.details 'PatchCTF in Cryosparc was used' _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.cell Expi293F _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid 'pcDNA3.4 TOPO' _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 6.14 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 67.72 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 10377 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ;96,330 particles were first picked using a blob picker of cryoSPARC. 2D class average images were generated as templates for subsequent reference-based auto-picking. ; _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 8101104 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' 'Cryospatc template based auto-picking was used.' 1 1 ? ? cryoSPARC 3.3.2 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 2.13 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' 'patch CTF estimation was used.' 4 1 ? ? cryoSPARC 3.3.2 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' 'Fit in map tool' 7 ? 1 ? 'UCSF Chimera' 1.16 OTHER ? 8 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' 'Ab-intio reconstruction' 9 1 ? ? cryoSPARC 3.3.2 'FINAL EULER ASSIGNMENT' 'Non-uniform refinement' 10 1 ? ? cryoSPARC 3.3.2 CLASSIFICATION 'Hetero refinement' 11 1 ? ? cryoSPARC 3.3.2 RECONSTRUCTION 'Local refinement' 12 1 ? ? cryoSPARC 3.3.2 'MODEL REFINEMENT' 'Real-space refinement' 13 ? 1 ? PHENIX 1.19.2 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration 0.8 _em_specimen.details 'This sample was monodisperse' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country 'Korea, Republic Of' _pdbx_audit_support.grant_number IBS-R030-C1 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n # _atom_sites.entry_id 8HSI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_