data_8HSI
#
_entry.id 8HSI
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.398
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 8HSI pdb_00008hsi 10.2210/pdb8hsi/pdb
WWPDB D_1300033810 ? ?
EMDB EMD-34998 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2023-12-27
2 'Structure model' 1 1 2024-09-18
3 'Structure model' 1 2 2024-11-13
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Data collection'
2 2 'Structure model' 'Database references'
3 3 'Structure model' 'Data collection'
4 3 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 2 'Structure model' citation
2 2 'Structure model' citation_author
3 2 'Structure model' em_admin
4 3 'Structure model' em_admin
5 3 'Structure model' pdbx_entry_details
6 3 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 2 'Structure model' '_citation.country'
2 2 'Structure model' '_citation.journal_abbrev'
3 2 'Structure model' '_citation.journal_id_CSD'
4 2 'Structure model' '_citation.journal_id_ISSN'
5 2 'Structure model' '_citation.journal_volume'
6 2 'Structure model' '_citation.page_first'
7 2 'Structure model' '_citation.page_last'
8 2 'Structure model' '_citation.pdbx_database_id_DOI'
9 2 'Structure model' '_citation.pdbx_database_id_PubMed'
10 2 'Structure model' '_citation.title'
11 2 'Structure model' '_citation.year'
12 2 'Structure model' '_em_admin.last_update'
13 3 'Structure model' '_em_admin.last_update'
14 3 'Structure model' '_pdbx_entry_details.has_protein_modification'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.entry_id 8HSI
_pdbx_database_status.recvd_initial_deposition_date 2022-12-19
_pdbx_database_status.SG_entry N
_pdbx_database_status.deposit_site PDBJ
_pdbx_database_status.process_site PDBJ
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.status_code_nmr_data ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.pdb_format_compatible Y
#
_pdbx_database_related.db_name EMDB
_pdbx_database_related.details 'Cryo-EM structure of human TMEM87A, PE-bound'
_pdbx_database_related.db_id EMD-34998
_pdbx_database_related.content_type 'associated EM volume'
#
_pdbx_contact_author.id 2
_pdbx_contact_author.email hm_kim@kaist.ac.kr
_pdbx_contact_author.name_first 'Ho Min'
_pdbx_contact_author.name_last Kim
_pdbx_contact_author.name_mi ?
_pdbx_contact_author.role 'principal investigator/group leader'
_pdbx_contact_author.identifier_ORCID 0000-0001-5999-7325
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
_audit_author.identifier_ORCID
'Han, A.' 1 0000-0003-2090-6769
'Kim, H.M.' 2 0000-0001-5999-7325
#
_citation.abstract ?
_citation.abstract_id_CAS ?
_citation.book_id_ISBN ?
_citation.book_publisher ?
_citation.book_publisher_city ?
_citation.book_title ?
_citation.coordinate_linkage ?
_citation.country UK
_citation.database_id_Medline ?
_citation.details ?
_citation.id primary
_citation.journal_abbrev 'Nat Commun'
_citation.journal_id_ASTM ?
_citation.journal_id_CSD ?
_citation.journal_id_ISSN 2041-1723
_citation.journal_full ?
_citation.journal_issue ?
_citation.journal_volume 15
_citation.language ?
_citation.page_first 5830
_citation.page_last 5830
_citation.title
;GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory.
;
_citation.year 2024
_citation.database_id_CSD ?
_citation.pdbx_database_id_DOI 10.1038/s41467-024-49297-8
_citation.pdbx_database_id_PubMed 38992057
_citation.pdbx_database_id_patent ?
_citation.unpublished_flag ?
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Kang, H.' 1 ?
primary 'Han, A.R.' 2 0000-0003-2090-6769
primary 'Zhang, A.' 3 ?
primary 'Jeong, H.' 4 ?
primary 'Koh, W.' 5 0000-0002-4398-1094
primary 'Lee, J.M.' 6 0000-0001-5245-7799
primary 'Lee, H.' 7 0000-0003-4648-586X
primary 'Jo, H.Y.' 8 ?
primary 'Maria-Solano, M.A.' 9 0000-0002-7837-0429
primary 'Bhalla, M.' 10 0000-0001-6045-3683
primary 'Kwon, J.' 11 ?
primary 'Roh, W.S.' 12 0000-0002-2626-1618
primary 'Yang, J.' 13 ?
primary 'An, H.J.' 14 ?
primary 'Choi, S.' 15 0000-0002-7669-7954
primary 'Kim, H.M.' 16 0000-0003-0029-3643
primary 'Lee, C.J.' 17 0000-0002-3555-0980
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'Transmembrane protein 87A' 63494.766 1 ? ? ? ?
2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 2 ? ? ? ?
3 branched man
'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ?
? ? ?
4 non-polymer syn '(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate'
746.050 1 ? ? ? ?
5 non-polymer syn CHOLESTEROL 386.654 2 ? ? ? ?
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI
TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN
LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF
GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG
IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL
YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE
DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME
;
_entity_poly.pdbx_seq_one_letter_code_can
;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI
TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN
LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF
GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG
IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL
YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE
DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
4 '(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate' L9Q
5 CHOLESTEROL CLR
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 MET n
1 2 ALA n
1 3 ALA n
1 4 ALA n
1 5 ALA n
1 6 TRP n
1 7 LEU n
1 8 GLN n
1 9 VAL n
1 10 LEU n
1 11 PRO n
1 12 VAL n
1 13 ILE n
1 14 LEU n
1 15 LEU n
1 16 LEU n
1 17 LEU n
1 18 GLY n
1 19 ALA n
1 20 HIS n
1 21 PRO n
1 22 SER n
1 23 PRO n
1 24 LEU n
1 25 SER n
1 26 PHE n
1 27 PHE n
1 28 SER n
1 29 ALA n
1 30 GLY n
1 31 PRO n
1 32 ALA n
1 33 THR n
1 34 VAL n
1 35 ALA n
1 36 ALA n
1 37 ALA n
1 38 ASP n
1 39 ARG n
1 40 SER n
1 41 LYS n
1 42 TRP n
1 43 HIS n
1 44 ILE n
1 45 PRO n
1 46 ILE n
1 47 PRO n
1 48 SER n
1 49 GLY n
1 50 LYS n
1 51 ASN n
1 52 TYR n
1 53 PHE n
1 54 SER n
1 55 PHE n
1 56 GLY n
1 57 LYS n
1 58 ILE n
1 59 LEU n
1 60 PHE n
1 61 ARG n
1 62 ASN n
1 63 THR n
1 64 THR n
1 65 ILE n
1 66 PHE n
1 67 LEU n
1 68 LYS n
1 69 PHE n
1 70 ASP n
1 71 GLY n
1 72 GLU n
1 73 PRO n
1 74 CYS n
1 75 ASP n
1 76 LEU n
1 77 SER n
1 78 LEU n
1 79 ASN n
1 80 ILE n
1 81 THR n
1 82 TRP n
1 83 TYR n
1 84 LEU n
1 85 LYS n
1 86 SER n
1 87 ALA n
1 88 ASP n
1 89 CYS n
1 90 TYR n
1 91 ASN n
1 92 GLU n
1 93 ILE n
1 94 TYR n
1 95 ASN n
1 96 PHE n
1 97 LYS n
1 98 ALA n
1 99 GLU n
1 100 GLU n
1 101 VAL n
1 102 GLU n
1 103 LEU n
1 104 TYR n
1 105 LEU n
1 106 GLU n
1 107 LYS n
1 108 LEU n
1 109 LYS n
1 110 GLU n
1 111 LYS n
1 112 ARG n
1 113 GLY n
1 114 LEU n
1 115 SER n
1 116 GLY n
1 117 LYS n
1 118 TYR n
1 119 GLN n
1 120 THR n
1 121 SER n
1 122 SER n
1 123 LYS n
1 124 LEU n
1 125 PHE n
1 126 GLN n
1 127 ASN n
1 128 CYS n
1 129 SER n
1 130 GLU n
1 131 LEU n
1 132 PHE n
1 133 LYS n
1 134 THR n
1 135 GLN n
1 136 THR n
1 137 PHE n
1 138 SER n
1 139 GLY n
1 140 ASP n
1 141 PHE n
1 142 MET n
1 143 HIS n
1 144 ARG n
1 145 LEU n
1 146 PRO n
1 147 LEU n
1 148 LEU n
1 149 GLY n
1 150 GLU n
1 151 LYS n
1 152 GLN n
1 153 GLU n
1 154 ALA n
1 155 LYS n
1 156 GLU n
1 157 ASN n
1 158 GLY n
1 159 THR n
1 160 ASN n
1 161 LEU n
1 162 THR n
1 163 PHE n
1 164 ILE n
1 165 GLY n
1 166 ASP n
1 167 LYS n
1 168 THR n
1 169 ALA n
1 170 MET n
1 171 HIS n
1 172 GLU n
1 173 PRO n
1 174 LEU n
1 175 GLN n
1 176 THR n
1 177 TRP n
1 178 GLN n
1 179 ASP n
1 180 ALA n
1 181 PRO n
1 182 TYR n
1 183 ILE n
1 184 PHE n
1 185 ILE n
1 186 VAL n
1 187 HIS n
1 188 ILE n
1 189 GLY n
1 190 ILE n
1 191 SER n
1 192 SER n
1 193 SER n
1 194 LYS n
1 195 GLU n
1 196 SER n
1 197 SER n
1 198 LYS n
1 199 GLU n
1 200 ASN n
1 201 SER n
1 202 LEU n
1 203 SER n
1 204 ASN n
1 205 LEU n
1 206 PHE n
1 207 THR n
1 208 MET n
1 209 THR n
1 210 VAL n
1 211 GLU n
1 212 VAL n
1 213 LYS n
1 214 GLY n
1 215 PRO n
1 216 TYR n
1 217 GLU n
1 218 TYR n
1 219 LEU n
1 220 THR n
1 221 LEU n
1 222 GLU n
1 223 ASP n
1 224 TYR n
1 225 PRO n
1 226 LEU n
1 227 MET n
1 228 ILE n
1 229 PHE n
1 230 PHE n
1 231 MET n
1 232 VAL n
1 233 MET n
1 234 CYS n
1 235 ILE n
1 236 VAL n
1 237 TYR n
1 238 VAL n
1 239 LEU n
1 240 PHE n
1 241 GLY n
1 242 VAL n
1 243 LEU n
1 244 TRP n
1 245 LEU n
1 246 ALA n
1 247 TRP n
1 248 SER n
1 249 ALA n
1 250 CYS n
1 251 TYR n
1 252 TRP n
1 253 ARG n
1 254 ASP n
1 255 LEU n
1 256 LEU n
1 257 ARG n
1 258 ILE n
1 259 GLN n
1 260 PHE n
1 261 TRP n
1 262 ILE n
1 263 GLY n
1 264 ALA n
1 265 VAL n
1 266 ILE n
1 267 PHE n
1 268 LEU n
1 269 GLY n
1 270 MET n
1 271 LEU n
1 272 GLU n
1 273 LYS n
1 274 ALA n
1 275 VAL n
1 276 PHE n
1 277 TYR n
1 278 ALA n
1 279 GLU n
1 280 PHE n
1 281 GLN n
1 282 ASN n
1 283 ILE n
1 284 ARG n
1 285 TYR n
1 286 LYS n
1 287 GLY n
1 288 GLU n
1 289 SER n
1 290 VAL n
1 291 GLN n
1 292 GLY n
1 293 ALA n
1 294 LEU n
1 295 ILE n
1 296 LEU n
1 297 ALA n
1 298 GLU n
1 299 LEU n
1 300 LEU n
1 301 SER n
1 302 ALA n
1 303 VAL n
1 304 LYS n
1 305 ARG n
1 306 SER n
1 307 LEU n
1 308 ALA n
1 309 ARG n
1 310 THR n
1 311 LEU n
1 312 VAL n
1 313 ILE n
1 314 ILE n
1 315 VAL n
1 316 SER n
1 317 LEU n
1 318 GLY n
1 319 TYR n
1 320 GLY n
1 321 ILE n
1 322 VAL n
1 323 LYS n
1 324 PRO n
1 325 ARG n
1 326 LEU n
1 327 GLY n
1 328 VAL n
1 329 THR n
1 330 LEU n
1 331 HIS n
1 332 LYS n
1 333 VAL n
1 334 VAL n
1 335 VAL n
1 336 ALA n
1 337 GLY n
1 338 ALA n
1 339 LEU n
1 340 TYR n
1 341 LEU n
1 342 LEU n
1 343 PHE n
1 344 SER n
1 345 GLY n
1 346 MET n
1 347 GLU n
1 348 GLY n
1 349 VAL n
1 350 LEU n
1 351 ARG n
1 352 VAL n
1 353 THR n
1 354 GLY n
1 355 ALA n
1 356 GLN n
1 357 THR n
1 358 ASP n
1 359 LEU n
1 360 ALA n
1 361 SER n
1 362 LEU n
1 363 ALA n
1 364 PHE n
1 365 ILE n
1 366 PRO n
1 367 LEU n
1 368 ALA n
1 369 PHE n
1 370 LEU n
1 371 ASP n
1 372 THR n
1 373 ALA n
1 374 LEU n
1 375 CYS n
1 376 TRP n
1 377 TRP n
1 378 ILE n
1 379 PHE n
1 380 ILE n
1 381 SER n
1 382 LEU n
1 383 THR n
1 384 GLN n
1 385 THR n
1 386 MET n
1 387 LYS n
1 388 LEU n
1 389 LEU n
1 390 LYS n
1 391 LEU n
1 392 ARG n
1 393 ARG n
1 394 ASN n
1 395 ILE n
1 396 VAL n
1 397 LYS n
1 398 LEU n
1 399 SER n
1 400 LEU n
1 401 TYR n
1 402 ARG n
1 403 HIS n
1 404 PHE n
1 405 THR n
1 406 ASN n
1 407 THR n
1 408 LEU n
1 409 ILE n
1 410 LEU n
1 411 ALA n
1 412 VAL n
1 413 ALA n
1 414 ALA n
1 415 SER n
1 416 ILE n
1 417 VAL n
1 418 PHE n
1 419 ILE n
1 420 ILE n
1 421 TRP n
1 422 THR n
1 423 THR n
1 424 MET n
1 425 LYS n
1 426 PHE n
1 427 ARG n
1 428 ILE n
1 429 VAL n
1 430 THR n
1 431 CYS n
1 432 GLN n
1 433 SER n
1 434 ASP n
1 435 TRP n
1 436 ARG n
1 437 GLU n
1 438 LEU n
1 439 TRP n
1 440 VAL n
1 441 ASP n
1 442 ASP n
1 443 ALA n
1 444 ILE n
1 445 TRP n
1 446 ARG n
1 447 LEU n
1 448 LEU n
1 449 PHE n
1 450 SER n
1 451 MET n
1 452 ILE n
1 453 LEU n
1 454 PHE n
1 455 VAL n
1 456 ILE n
1 457 MET n
1 458 VAL n
1 459 LEU n
1 460 TRP n
1 461 ARG n
1 462 PRO n
1 463 SER n
1 464 ALA n
1 465 ASN n
1 466 ASN n
1 467 GLN n
1 468 ARG n
1 469 PHE n
1 470 ALA n
1 471 PHE n
1 472 SER n
1 473 PRO n
1 474 LEU n
1 475 SER n
1 476 GLU n
1 477 GLU n
1 478 GLU n
1 479 GLU n
1 480 GLU n
1 481 ASP n
1 482 GLU n
1 483 GLN n
1 484 LYS n
1 485 GLU n
1 486 PRO n
1 487 MET n
1 488 LEU n
1 489 LYS n
1 490 GLU n
1 491 SER n
1 492 PHE n
1 493 GLU n
1 494 GLY n
1 495 MET n
1 496 LYS n
1 497 MET n
1 498 ARG n
1 499 SER n
1 500 THR n
1 501 LYS n
1 502 GLN n
1 503 GLU n
1 504 PRO n
1 505 ASN n
1 506 GLY n
1 507 ASN n
1 508 SER n
1 509 LYS n
1 510 VAL n
1 511 ASN n
1 512 LYS n
1 513 ALA n
1 514 GLN n
1 515 GLU n
1 516 ASP n
1 517 ASP n
1 518 LEU n
1 519 LYS n
1 520 TRP n
1 521 VAL n
1 522 GLU n
1 523 GLU n
1 524 ASN n
1 525 VAL n
1 526 PRO n
1 527 SER n
1 528 SER n
1 529 VAL n
1 530 THR n
1 531 ASP n
1 532 VAL n
1 533 ALA n
1 534 LEU n
1 535 PRO n
1 536 ALA n
1 537 LEU n
1 538 LEU n
1 539 ASP n
1 540 SER n
1 541 ASP n
1 542 GLU n
1 543 GLU n
1 544 ARG n
1 545 MET n
1 546 ILE n
1 547 THR n
1 548 HIS n
1 549 PHE n
1 550 GLU n
1 551 ARG n
1 552 SER n
1 553 LYS n
1 554 MET n
1 555 GLU n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type 'Biological sequence'
_entity_src_gen.pdbx_beg_seq_num 1
_entity_src_gen.pdbx_end_seq_num 555
_entity_src_gen.gene_src_common_name human
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene 'TMEM87A, PSEC0094'
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line HEK293F
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell Expi293F
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
2 oligosaccharide
3 oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0
2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0
3 2 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ?
4 3 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0
5 3 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0
6 3 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ?
2 3 2 NAG C1 O1 1 NAG O4 HO4 sing ?
3 3 3 BMA C1 O1 2 NAG O4 HO4 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156
CLR non-polymer . CHOLESTEROL ? 'C27 H46 O' 386.654
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
L9Q non-polymer .
'(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate'
1-stearoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine 'C41 H80 N O8 P' 746.050
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose
;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb
BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose
BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp
BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man
NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb
NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine
NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc
NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 MET 1 1 ? ? ? A . n
A 1 2 ALA 2 2 ? ? ? A . n
A 1 3 ALA 3 3 ? ? ? A . n
A 1 4 ALA 4 4 ? ? ? A . n
A 1 5 ALA 5 5 ? ? ? A . n
A 1 6 TRP 6 6 ? ? ? A . n
A 1 7 LEU 7 7 ? ? ? A . n
A 1 8 GLN 8 8 ? ? ? A . n
A 1 9 VAL 9 9 ? ? ? A . n
A 1 10 LEU 10 10 ? ? ? A . n
A 1 11 PRO 11 11 ? ? ? A . n
A 1 12 VAL 12 12 ? ? ? A . n
A 1 13 ILE 13 13 ? ? ? A . n
A 1 14 LEU 14 14 ? ? ? A . n
A 1 15 LEU 15 15 ? ? ? A . n
A 1 16 LEU 16 16 ? ? ? A . n
A 1 17 LEU 17 17 ? ? ? A . n
A 1 18 GLY 18 18 ? ? ? A . n
A 1 19 ALA 19 19 ? ? ? A . n
A 1 20 HIS 20 20 ? ? ? A . n
A 1 21 PRO 21 21 ? ? ? A . n
A 1 22 SER 22 22 ? ? ? A . n
A 1 23 PRO 23 23 ? ? ? A . n
A 1 24 LEU 24 24 ? ? ? A . n
A 1 25 SER 25 25 ? ? ? A . n
A 1 26 PHE 26 26 ? ? ? A . n
A 1 27 PHE 27 27 ? ? ? A . n
A 1 28 SER 28 28 ? ? ? A . n
A 1 29 ALA 29 29 ? ? ? A . n
A 1 30 GLY 30 30 ? ? ? A . n
A 1 31 PRO 31 31 ? ? ? A . n
A 1 32 ALA 32 32 ? ? ? A . n
A 1 33 THR 33 33 ? ? ? A . n
A 1 34 VAL 34 34 ? ? ? A . n
A 1 35 ALA 35 35 ? ? ? A . n
A 1 36 ALA 36 36 ? ? ? A . n
A 1 37 ALA 37 37 ? ? ? A . n
A 1 38 ASP 38 38 38 ASP ASP A . n
A 1 39 ARG 39 39 39 ARG ARG A . n
A 1 40 SER 40 40 40 SER SER A . n
A 1 41 LYS 41 41 41 LYS LYS A . n
A 1 42 TRP 42 42 42 TRP TRP A . n
A 1 43 HIS 43 43 43 HIS HIS A . n
A 1 44 ILE 44 44 44 ILE ILE A . n
A 1 45 PRO 45 45 45 PRO PRO A . n
A 1 46 ILE 46 46 46 ILE ILE A . n
A 1 47 PRO 47 47 47 PRO PRO A . n
A 1 48 SER 48 48 48 SER SER A . n
A 1 49 GLY 49 49 49 GLY GLY A . n
A 1 50 LYS 50 50 50 LYS LYS A . n
A 1 51 ASN 51 51 51 ASN ASN A . n
A 1 52 TYR 52 52 52 TYR TYR A . n
A 1 53 PHE 53 53 53 PHE PHE A . n
A 1 54 SER 54 54 54 SER SER A . n
A 1 55 PHE 55 55 55 PHE PHE A . n
A 1 56 GLY 56 56 56 GLY GLY A . n
A 1 57 LYS 57 57 57 LYS LYS A . n
A 1 58 ILE 58 58 58 ILE ILE A . n
A 1 59 LEU 59 59 59 LEU LEU A . n
A 1 60 PHE 60 60 60 PHE PHE A . n
A 1 61 ARG 61 61 61 ARG ARG A . n
A 1 62 ASN 62 62 62 ASN ASN A . n
A 1 63 THR 63 63 63 THR THR A . n
A 1 64 THR 64 64 64 THR THR A . n
A 1 65 ILE 65 65 65 ILE ILE A . n
A 1 66 PHE 66 66 66 PHE PHE A . n
A 1 67 LEU 67 67 67 LEU LEU A . n
A 1 68 LYS 68 68 68 LYS LYS A . n
A 1 69 PHE 69 69 69 PHE PHE A . n
A 1 70 ASP 70 70 70 ASP ASP A . n
A 1 71 GLY 71 71 71 GLY GLY A . n
A 1 72 GLU 72 72 72 GLU GLU A . n
A 1 73 PRO 73 73 73 PRO PRO A . n
A 1 74 CYS 74 74 74 CYS CYS A . n
A 1 75 ASP 75 75 75 ASP ASP A . n
A 1 76 LEU 76 76 76 LEU LEU A . n
A 1 77 SER 77 77 77 SER SER A . n
A 1 78 LEU 78 78 78 LEU LEU A . n
A 1 79 ASN 79 79 79 ASN ASN A . n
A 1 80 ILE 80 80 80 ILE ILE A . n
A 1 81 THR 81 81 81 THR THR A . n
A 1 82 TRP 82 82 82 TRP TRP A . n
A 1 83 TYR 83 83 83 TYR TYR A . n
A 1 84 LEU 84 84 84 LEU LEU A . n
A 1 85 LYS 85 85 85 LYS LYS A . n
A 1 86 SER 86 86 86 SER SER A . n
A 1 87 ALA 87 87 87 ALA ALA A . n
A 1 88 ASP 88 88 88 ASP ASP A . n
A 1 89 CYS 89 89 89 CYS CYS A . n
A 1 90 TYR 90 90 90 TYR TYR A . n
A 1 91 ASN 91 91 91 ASN ASN A . n
A 1 92 GLU 92 92 92 GLU GLU A . n
A 1 93 ILE 93 93 93 ILE ILE A . n
A 1 94 TYR 94 94 94 TYR TYR A . n
A 1 95 ASN 95 95 95 ASN ASN A . n
A 1 96 PHE 96 96 96 PHE PHE A . n
A 1 97 LYS 97 97 97 LYS LYS A . n
A 1 98 ALA 98 98 98 ALA ALA A . n
A 1 99 GLU 99 99 99 GLU GLU A . n
A 1 100 GLU 100 100 100 GLU GLU A . n
A 1 101 VAL 101 101 101 VAL VAL A . n
A 1 102 GLU 102 102 102 GLU GLU A . n
A 1 103 LEU 103 103 103 LEU LEU A . n
A 1 104 TYR 104 104 104 TYR TYR A . n
A 1 105 LEU 105 105 105 LEU LEU A . n
A 1 106 GLU 106 106 106 GLU GLU A . n
A 1 107 LYS 107 107 107 LYS LYS A . n
A 1 108 LEU 108 108 108 LEU LEU A . n
A 1 109 LYS 109 109 109 LYS LYS A . n
A 1 110 GLU 110 110 110 GLU GLU A . n
A 1 111 LYS 111 111 111 LYS LYS A . n
A 1 112 ARG 112 112 112 ARG ARG A . n
A 1 113 GLY 113 113 113 GLY GLY A . n
A 1 114 LEU 114 114 114 LEU LEU A . n
A 1 115 SER 115 115 115 SER SER A . n
A 1 116 GLY 116 116 116 GLY GLY A . n
A 1 117 LYS 117 117 117 LYS LYS A . n
A 1 118 TYR 118 118 118 TYR TYR A . n
A 1 119 GLN 119 119 119 GLN GLN A . n
A 1 120 THR 120 120 120 THR THR A . n
A 1 121 SER 121 121 121 SER SER A . n
A 1 122 SER 122 122 122 SER SER A . n
A 1 123 LYS 123 123 123 LYS LYS A . n
A 1 124 LEU 124 124 124 LEU LEU A . n
A 1 125 PHE 125 125 125 PHE PHE A . n
A 1 126 GLN 126 126 126 GLN GLN A . n
A 1 127 ASN 127 127 127 ASN ASN A . n
A 1 128 CYS 128 128 128 CYS CYS A . n
A 1 129 SER 129 129 129 SER SER A . n
A 1 130 GLU 130 130 130 GLU GLU A . n
A 1 131 LEU 131 131 131 LEU LEU A . n
A 1 132 PHE 132 132 132 PHE PHE A . n
A 1 133 LYS 133 133 133 LYS LYS A . n
A 1 134 THR 134 134 134 THR THR A . n
A 1 135 GLN 135 135 135 GLN GLN A . n
A 1 136 THR 136 136 136 THR THR A . n
A 1 137 PHE 137 137 137 PHE PHE A . n
A 1 138 SER 138 138 138 SER SER A . n
A 1 139 GLY 139 139 139 GLY GLY A . n
A 1 140 ASP 140 140 140 ASP ASP A . n
A 1 141 PHE 141 141 141 PHE PHE A . n
A 1 142 MET 142 142 142 MET MET A . n
A 1 143 HIS 143 143 143 HIS HIS A . n
A 1 144 ARG 144 144 144 ARG ARG A . n
A 1 145 LEU 145 145 145 LEU LEU A . n
A 1 146 PRO 146 146 146 PRO PRO A . n
A 1 147 LEU 147 147 ? ? ? A . n
A 1 148 LEU 148 148 ? ? ? A . n
A 1 149 GLY 149 149 ? ? ? A . n
A 1 150 GLU 150 150 ? ? ? A . n
A 1 151 LYS 151 151 ? ? ? A . n
A 1 152 GLN 152 152 ? ? ? A . n
A 1 153 GLU 153 153 ? ? ? A . n
A 1 154 ALA 154 154 ? ? ? A . n
A 1 155 LYS 155 155 ? ? ? A . n
A 1 156 GLU 156 156 ? ? ? A . n
A 1 157 ASN 157 157 ? ? ? A . n
A 1 158 GLY 158 158 ? ? ? A . n
A 1 159 THR 159 159 ? ? ? A . n
A 1 160 ASN 160 160 ? ? ? A . n
A 1 161 LEU 161 161 ? ? ? A . n
A 1 162 THR 162 162 ? ? ? A . n
A 1 163 PHE 163 163 ? ? ? A . n
A 1 164 ILE 164 164 ? ? ? A . n
A 1 165 GLY 165 165 ? ? ? A . n
A 1 166 ASP 166 166 ? ? ? A . n
A 1 167 LYS 167 167 ? ? ? A . n
A 1 168 THR 168 168 168 THR THR A . n
A 1 169 ALA 169 169 169 ALA ALA A . n
A 1 170 MET 170 170 170 MET MET A . n
A 1 171 HIS 171 171 171 HIS HIS A . n
A 1 172 GLU 172 172 172 GLU GLU A . n
A 1 173 PRO 173 173 173 PRO PRO A . n
A 1 174 LEU 174 174 174 LEU LEU A . n
A 1 175 GLN 175 175 175 GLN GLN A . n
A 1 176 THR 176 176 176 THR THR A . n
A 1 177 TRP 177 177 177 TRP TRP A . n
A 1 178 GLN 178 178 178 GLN GLN A . n
A 1 179 ASP 179 179 179 ASP ASP A . n
A 1 180 ALA 180 180 180 ALA ALA A . n
A 1 181 PRO 181 181 181 PRO PRO A . n
A 1 182 TYR 182 182 182 TYR TYR A . n
A 1 183 ILE 183 183 183 ILE ILE A . n
A 1 184 PHE 184 184 184 PHE PHE A . n
A 1 185 ILE 185 185 185 ILE ILE A . n
A 1 186 VAL 186 186 186 VAL VAL A . n
A 1 187 HIS 187 187 187 HIS HIS A . n
A 1 188 ILE 188 188 188 ILE ILE A . n
A 1 189 GLY 189 189 189 GLY GLY A . n
A 1 190 ILE 190 190 190 ILE ILE A . n
A 1 191 SER 191 191 191 SER SER A . n
A 1 192 SER 192 192 192 SER SER A . n
A 1 193 SER 193 193 ? ? ? A . n
A 1 194 LYS 194 194 ? ? ? A . n
A 1 195 GLU 195 195 ? ? ? A . n
A 1 196 SER 196 196 ? ? ? A . n
A 1 197 SER 197 197 ? ? ? A . n
A 1 198 LYS 198 198 ? ? ? A . n
A 1 199 GLU 199 199 ? ? ? A . n
A 1 200 ASN 200 200 ? ? ? A . n
A 1 201 SER 201 201 ? ? ? A . n
A 1 202 LEU 202 202 ? ? ? A . n
A 1 203 SER 203 203 203 SER SER A . n
A 1 204 ASN 204 204 204 ASN ASN A . n
A 1 205 LEU 205 205 205 LEU LEU A . n
A 1 206 PHE 206 206 206 PHE PHE A . n
A 1 207 THR 207 207 207 THR THR A . n
A 1 208 MET 208 208 208 MET MET A . n
A 1 209 THR 209 209 209 THR THR A . n
A 1 210 VAL 210 210 210 VAL VAL A . n
A 1 211 GLU 211 211 211 GLU GLU A . n
A 1 212 VAL 212 212 212 VAL VAL A . n
A 1 213 LYS 213 213 213 LYS LYS A . n
A 1 214 GLY 214 214 214 GLY GLY A . n
A 1 215 PRO 215 215 215 PRO PRO A . n
A 1 216 TYR 216 216 216 TYR TYR A . n
A 1 217 GLU 217 217 217 GLU GLU A . n
A 1 218 TYR 218 218 218 TYR TYR A . n
A 1 219 LEU 219 219 219 LEU LEU A . n
A 1 220 THR 220 220 220 THR THR A . n
A 1 221 LEU 221 221 221 LEU LEU A . n
A 1 222 GLU 222 222 222 GLU GLU A . n
A 1 223 ASP 223 223 223 ASP ASP A . n
A 1 224 TYR 224 224 224 TYR TYR A . n
A 1 225 PRO 225 225 225 PRO PRO A . n
A 1 226 LEU 226 226 226 LEU LEU A . n
A 1 227 MET 227 227 227 MET MET A . n
A 1 228 ILE 228 228 228 ILE ILE A . n
A 1 229 PHE 229 229 229 PHE PHE A . n
A 1 230 PHE 230 230 230 PHE PHE A . n
A 1 231 MET 231 231 231 MET MET A . n
A 1 232 VAL 232 232 232 VAL VAL A . n
A 1 233 MET 233 233 233 MET MET A . n
A 1 234 CYS 234 234 234 CYS CYS A . n
A 1 235 ILE 235 235 235 ILE ILE A . n
A 1 236 VAL 236 236 236 VAL VAL A . n
A 1 237 TYR 237 237 237 TYR TYR A . n
A 1 238 VAL 238 238 238 VAL VAL A . n
A 1 239 LEU 239 239 239 LEU LEU A . n
A 1 240 PHE 240 240 240 PHE PHE A . n
A 1 241 GLY 241 241 241 GLY GLY A . n
A 1 242 VAL 242 242 242 VAL VAL A . n
A 1 243 LEU 243 243 243 LEU LEU A . n
A 1 244 TRP 244 244 244 TRP TRP A . n
A 1 245 LEU 245 245 245 LEU LEU A . n
A 1 246 ALA 246 246 246 ALA ALA A . n
A 1 247 TRP 247 247 247 TRP TRP A . n
A 1 248 SER 248 248 248 SER SER A . n
A 1 249 ALA 249 249 249 ALA ALA A . n
A 1 250 CYS 250 250 250 CYS CYS A . n
A 1 251 TYR 251 251 251 TYR TYR A . n
A 1 252 TRP 252 252 252 TRP TRP A . n
A 1 253 ARG 253 253 253 ARG ARG A . n
A 1 254 ASP 254 254 254 ASP ASP A . n
A 1 255 LEU 255 255 255 LEU LEU A . n
A 1 256 LEU 256 256 256 LEU LEU A . n
A 1 257 ARG 257 257 257 ARG ARG A . n
A 1 258 ILE 258 258 258 ILE ILE A . n
A 1 259 GLN 259 259 259 GLN GLN A . n
A 1 260 PHE 260 260 260 PHE PHE A . n
A 1 261 TRP 261 261 261 TRP TRP A . n
A 1 262 ILE 262 262 262 ILE ILE A . n
A 1 263 GLY 263 263 263 GLY GLY A . n
A 1 264 ALA 264 264 264 ALA ALA A . n
A 1 265 VAL 265 265 265 VAL VAL A . n
A 1 266 ILE 266 266 266 ILE ILE A . n
A 1 267 PHE 267 267 267 PHE PHE A . n
A 1 268 LEU 268 268 268 LEU LEU A . n
A 1 269 GLY 269 269 269 GLY GLY A . n
A 1 270 MET 270 270 270 MET MET A . n
A 1 271 LEU 271 271 271 LEU LEU A . n
A 1 272 GLU 272 272 272 GLU GLU A . n
A 1 273 LYS 273 273 273 LYS LYS A . n
A 1 274 ALA 274 274 274 ALA ALA A . n
A 1 275 VAL 275 275 275 VAL VAL A . n
A 1 276 PHE 276 276 276 PHE PHE A . n
A 1 277 TYR 277 277 277 TYR TYR A . n
A 1 278 ALA 278 278 278 ALA ALA A . n
A 1 279 GLU 279 279 279 GLU GLU A . n
A 1 280 PHE 280 280 280 PHE PHE A . n
A 1 281 GLN 281 281 281 GLN GLN A . n
A 1 282 ASN 282 282 282 ASN ASN A . n
A 1 283 ILE 283 283 283 ILE ILE A . n
A 1 284 ARG 284 284 284 ARG ARG A . n
A 1 285 TYR 285 285 285 TYR TYR A . n
A 1 286 LYS 286 286 286 LYS LYS A . n
A 1 287 GLY 287 287 287 GLY GLY A . n
A 1 288 GLU 288 288 288 GLU GLU A . n
A 1 289 SER 289 289 289 SER SER A . n
A 1 290 VAL 290 290 290 VAL VAL A . n
A 1 291 GLN 291 291 291 GLN GLN A . n
A 1 292 GLY 292 292 292 GLY GLY A . n
A 1 293 ALA 293 293 293 ALA ALA A . n
A 1 294 LEU 294 294 294 LEU LEU A . n
A 1 295 ILE 295 295 295 ILE ILE A . n
A 1 296 LEU 296 296 296 LEU LEU A . n
A 1 297 ALA 297 297 297 ALA ALA A . n
A 1 298 GLU 298 298 298 GLU GLU A . n
A 1 299 LEU 299 299 299 LEU LEU A . n
A 1 300 LEU 300 300 300 LEU LEU A . n
A 1 301 SER 301 301 301 SER SER A . n
A 1 302 ALA 302 302 302 ALA ALA A . n
A 1 303 VAL 303 303 303 VAL VAL A . n
A 1 304 LYS 304 304 304 LYS LYS A . n
A 1 305 ARG 305 305 305 ARG ARG A . n
A 1 306 SER 306 306 306 SER SER A . n
A 1 307 LEU 307 307 307 LEU LEU A . n
A 1 308 ALA 308 308 308 ALA ALA A . n
A 1 309 ARG 309 309 309 ARG ARG A . n
A 1 310 THR 310 310 310 THR THR A . n
A 1 311 LEU 311 311 311 LEU LEU A . n
A 1 312 VAL 312 312 312 VAL VAL A . n
A 1 313 ILE 313 313 313 ILE ILE A . n
A 1 314 ILE 314 314 314 ILE ILE A . n
A 1 315 VAL 315 315 315 VAL VAL A . n
A 1 316 SER 316 316 316 SER SER A . n
A 1 317 LEU 317 317 317 LEU LEU A . n
A 1 318 GLY 318 318 318 GLY GLY A . n
A 1 319 TYR 319 319 319 TYR TYR A . n
A 1 320 GLY 320 320 320 GLY GLY A . n
A 1 321 ILE 321 321 321 ILE ILE A . n
A 1 322 VAL 322 322 322 VAL VAL A . n
A 1 323 LYS 323 323 323 LYS LYS A . n
A 1 324 PRO 324 324 324 PRO PRO A . n
A 1 325 ARG 325 325 325 ARG ARG A . n
A 1 326 LEU 326 326 326 LEU LEU A . n
A 1 327 GLY 327 327 327 GLY GLY A . n
A 1 328 VAL 328 328 328 VAL VAL A . n
A 1 329 THR 329 329 329 THR THR A . n
A 1 330 LEU 330 330 330 LEU LEU A . n
A 1 331 HIS 331 331 331 HIS HIS A . n
A 1 332 LYS 332 332 332 LYS LYS A . n
A 1 333 VAL 333 333 333 VAL VAL A . n
A 1 334 VAL 334 334 334 VAL VAL A . n
A 1 335 VAL 335 335 335 VAL VAL A . n
A 1 336 ALA 336 336 336 ALA ALA A . n
A 1 337 GLY 337 337 337 GLY GLY A . n
A 1 338 ALA 338 338 338 ALA ALA A . n
A 1 339 LEU 339 339 339 LEU LEU A . n
A 1 340 TYR 340 340 340 TYR TYR A . n
A 1 341 LEU 341 341 341 LEU LEU A . n
A 1 342 LEU 342 342 342 LEU LEU A . n
A 1 343 PHE 343 343 343 PHE PHE A . n
A 1 344 SER 344 344 344 SER SER A . n
A 1 345 GLY 345 345 345 GLY GLY A . n
A 1 346 MET 346 346 346 MET MET A . n
A 1 347 GLU 347 347 347 GLU GLU A . n
A 1 348 GLY 348 348 348 GLY GLY A . n
A 1 349 VAL 349 349 349 VAL VAL A . n
A 1 350 LEU 350 350 350 LEU LEU A . n
A 1 351 ARG 351 351 351 ARG ARG A . n
A 1 352 VAL 352 352 352 VAL VAL A . n
A 1 353 THR 353 353 353 THR THR A . n
A 1 354 GLY 354 354 354 GLY GLY A . n
A 1 355 ALA 355 355 355 ALA ALA A . n
A 1 356 GLN 356 356 356 GLN GLN A . n
A 1 357 THR 357 357 357 THR THR A . n
A 1 358 ASP 358 358 358 ASP ASP A . n
A 1 359 LEU 359 359 359 LEU LEU A . n
A 1 360 ALA 360 360 360 ALA ALA A . n
A 1 361 SER 361 361 361 SER SER A . n
A 1 362 LEU 362 362 362 LEU LEU A . n
A 1 363 ALA 363 363 363 ALA ALA A . n
A 1 364 PHE 364 364 364 PHE PHE A . n
A 1 365 ILE 365 365 365 ILE ILE A . n
A 1 366 PRO 366 366 366 PRO PRO A . n
A 1 367 LEU 367 367 367 LEU LEU A . n
A 1 368 ALA 368 368 368 ALA ALA A . n
A 1 369 PHE 369 369 369 PHE PHE A . n
A 1 370 LEU 370 370 370 LEU LEU A . n
A 1 371 ASP 371 371 371 ASP ASP A . n
A 1 372 THR 372 372 372 THR THR A . n
A 1 373 ALA 373 373 373 ALA ALA A . n
A 1 374 LEU 374 374 374 LEU LEU A . n
A 1 375 CYS 375 375 375 CYS CYS A . n
A 1 376 TRP 376 376 376 TRP TRP A . n
A 1 377 TRP 377 377 377 TRP TRP A . n
A 1 378 ILE 378 378 378 ILE ILE A . n
A 1 379 PHE 379 379 379 PHE PHE A . n
A 1 380 ILE 380 380 380 ILE ILE A . n
A 1 381 SER 381 381 381 SER SER A . n
A 1 382 LEU 382 382 382 LEU LEU A . n
A 1 383 THR 383 383 383 THR THR A . n
A 1 384 GLN 384 384 384 GLN GLN A . n
A 1 385 THR 385 385 385 THR THR A . n
A 1 386 MET 386 386 386 MET MET A . n
A 1 387 LYS 387 387 387 LYS LYS A . n
A 1 388 LEU 388 388 388 LEU LEU A . n
A 1 389 LEU 389 389 389 LEU LEU A . n
A 1 390 LYS 390 390 390 LYS LYS A . n
A 1 391 LEU 391 391 391 LEU LEU A . n
A 1 392 ARG 392 392 392 ARG ARG A . n
A 1 393 ARG 393 393 393 ARG ARG A . n
A 1 394 ASN 394 394 394 ASN ASN A . n
A 1 395 ILE 395 395 395 ILE ILE A . n
A 1 396 VAL 396 396 396 VAL VAL A . n
A 1 397 LYS 397 397 397 LYS LYS A . n
A 1 398 LEU 398 398 398 LEU LEU A . n
A 1 399 SER 399 399 399 SER SER A . n
A 1 400 LEU 400 400 400 LEU LEU A . n
A 1 401 TYR 401 401 401 TYR TYR A . n
A 1 402 ARG 402 402 402 ARG ARG A . n
A 1 403 HIS 403 403 403 HIS HIS A . n
A 1 404 PHE 404 404 404 PHE PHE A . n
A 1 405 THR 405 405 405 THR THR A . n
A 1 406 ASN 406 406 406 ASN ASN A . n
A 1 407 THR 407 407 407 THR THR A . n
A 1 408 LEU 408 408 408 LEU LEU A . n
A 1 409 ILE 409 409 409 ILE ILE A . n
A 1 410 LEU 410 410 410 LEU LEU A . n
A 1 411 ALA 411 411 411 ALA ALA A . n
A 1 412 VAL 412 412 412 VAL VAL A . n
A 1 413 ALA 413 413 413 ALA ALA A . n
A 1 414 ALA 414 414 414 ALA ALA A . n
A 1 415 SER 415 415 415 SER SER A . n
A 1 416 ILE 416 416 416 ILE ILE A . n
A 1 417 VAL 417 417 417 VAL VAL A . n
A 1 418 PHE 418 418 418 PHE PHE A . n
A 1 419 ILE 419 419 419 ILE ILE A . n
A 1 420 ILE 420 420 420 ILE ILE A . n
A 1 421 TRP 421 421 421 TRP TRP A . n
A 1 422 THR 422 422 422 THR THR A . n
A 1 423 THR 423 423 423 THR THR A . n
A 1 424 MET 424 424 424 MET MET A . n
A 1 425 LYS 425 425 425 LYS LYS A . n
A 1 426 PHE 426 426 426 PHE PHE A . n
A 1 427 ARG 427 427 427 ARG ARG A . n
A 1 428 ILE 428 428 428 ILE ILE A . n
A 1 429 VAL 429 429 429 VAL VAL A . n
A 1 430 THR 430 430 430 THR THR A . n
A 1 431 CYS 431 431 431 CYS CYS A . n
A 1 432 GLN 432 432 432 GLN GLN A . n
A 1 433 SER 433 433 433 SER SER A . n
A 1 434 ASP 434 434 434 ASP ASP A . n
A 1 435 TRP 435 435 435 TRP TRP A . n
A 1 436 ARG 436 436 436 ARG ARG A . n
A 1 437 GLU 437 437 437 GLU GLU A . n
A 1 438 LEU 438 438 438 LEU LEU A . n
A 1 439 TRP 439 439 439 TRP TRP A . n
A 1 440 VAL 440 440 440 VAL VAL A . n
A 1 441 ASP 441 441 441 ASP ASP A . n
A 1 442 ASP 442 442 442 ASP ASP A . n
A 1 443 ALA 443 443 443 ALA ALA A . n
A 1 444 ILE 444 444 444 ILE ILE A . n
A 1 445 TRP 445 445 445 TRP TRP A . n
A 1 446 ARG 446 446 446 ARG ARG A . n
A 1 447 LEU 447 447 447 LEU LEU A . n
A 1 448 LEU 448 448 448 LEU LEU A . n
A 1 449 PHE 449 449 449 PHE PHE A . n
A 1 450 SER 450 450 450 SER SER A . n
A 1 451 MET 451 451 451 MET MET A . n
A 1 452 ILE 452 452 452 ILE ILE A . n
A 1 453 LEU 453 453 453 LEU LEU A . n
A 1 454 PHE 454 454 454 PHE PHE A . n
A 1 455 VAL 455 455 455 VAL VAL A . n
A 1 456 ILE 456 456 456 ILE ILE A . n
A 1 457 MET 457 457 457 MET MET A . n
A 1 458 VAL 458 458 458 VAL VAL A . n
A 1 459 LEU 459 459 459 LEU LEU A . n
A 1 460 TRP 460 460 460 TRP TRP A . n
A 1 461 ARG 461 461 461 ARG ARG A . n
A 1 462 PRO 462 462 462 PRO PRO A . n
A 1 463 SER 463 463 463 SER SER A . n
A 1 464 ALA 464 464 464 ALA ALA A . n
A 1 465 ASN 465 465 465 ASN ASN A . n
A 1 466 ASN 466 466 466 ASN ASN A . n
A 1 467 GLN 467 467 467 GLN GLN A . n
A 1 468 ARG 468 468 468 ARG ARG A . n
A 1 469 PHE 469 469 469 PHE PHE A . n
A 1 470 ALA 470 470 470 ALA ALA A . n
A 1 471 PHE 471 471 471 PHE PHE A . n
A 1 472 SER 472 472 472 SER SER A . n
A 1 473 PRO 473 473 473 PRO PRO A . n
A 1 474 LEU 474 474 ? ? ? A . n
A 1 475 SER 475 475 ? ? ? A . n
A 1 476 GLU 476 476 ? ? ? A . n
A 1 477 GLU 477 477 ? ? ? A . n
A 1 478 GLU 478 478 ? ? ? A . n
A 1 479 GLU 479 479 ? ? ? A . n
A 1 480 GLU 480 480 ? ? ? A . n
A 1 481 ASP 481 481 ? ? ? A . n
A 1 482 GLU 482 482 ? ? ? A . n
A 1 483 GLN 483 483 ? ? ? A . n
A 1 484 LYS 484 484 ? ? ? A . n
A 1 485 GLU 485 485 ? ? ? A . n
A 1 486 PRO 486 486 ? ? ? A . n
A 1 487 MET 487 487 ? ? ? A . n
A 1 488 LEU 488 488 ? ? ? A . n
A 1 489 LYS 489 489 ? ? ? A . n
A 1 490 GLU 490 490 ? ? ? A . n
A 1 491 SER 491 491 ? ? ? A . n
A 1 492 PHE 492 492 ? ? ? A . n
A 1 493 GLU 493 493 ? ? ? A . n
A 1 494 GLY 494 494 ? ? ? A . n
A 1 495 MET 495 495 ? ? ? A . n
A 1 496 LYS 496 496 ? ? ? A . n
A 1 497 MET 497 497 ? ? ? A . n
A 1 498 ARG 498 498 ? ? ? A . n
A 1 499 SER 499 499 ? ? ? A . n
A 1 500 THR 500 500 ? ? ? A . n
A 1 501 LYS 501 501 ? ? ? A . n
A 1 502 GLN 502 502 ? ? ? A . n
A 1 503 GLU 503 503 ? ? ? A . n
A 1 504 PRO 504 504 ? ? ? A . n
A 1 505 ASN 505 505 ? ? ? A . n
A 1 506 GLY 506 506 ? ? ? A . n
A 1 507 ASN 507 507 ? ? ? A . n
A 1 508 SER 508 508 ? ? ? A . n
A 1 509 LYS 509 509 ? ? ? A . n
A 1 510 VAL 510 510 ? ? ? A . n
A 1 511 ASN 511 511 ? ? ? A . n
A 1 512 LYS 512 512 ? ? ? A . n
A 1 513 ALA 513 513 ? ? ? A . n
A 1 514 GLN 514 514 ? ? ? A . n
A 1 515 GLU 515 515 ? ? ? A . n
A 1 516 ASP 516 516 ? ? ? A . n
A 1 517 ASP 517 517 ? ? ? A . n
A 1 518 LEU 518 518 ? ? ? A . n
A 1 519 LYS 519 519 ? ? ? A . n
A 1 520 TRP 520 520 ? ? ? A . n
A 1 521 VAL 521 521 ? ? ? A . n
A 1 522 GLU 522 522 ? ? ? A . n
A 1 523 GLU 523 523 ? ? ? A . n
A 1 524 ASN 524 524 ? ? ? A . n
A 1 525 VAL 525 525 ? ? ? A . n
A 1 526 PRO 526 526 ? ? ? A . n
A 1 527 SER 527 527 ? ? ? A . n
A 1 528 SER 528 528 ? ? ? A . n
A 1 529 VAL 529 529 ? ? ? A . n
A 1 530 THR 530 530 ? ? ? A . n
A 1 531 ASP 531 531 ? ? ? A . n
A 1 532 VAL 532 532 ? ? ? A . n
A 1 533 ALA 533 533 ? ? ? A . n
A 1 534 LEU 534 534 ? ? ? A . n
A 1 535 PRO 535 535 ? ? ? A . n
A 1 536 ALA 536 536 ? ? ? A . n
A 1 537 LEU 537 537 ? ? ? A . n
A 1 538 LEU 538 538 ? ? ? A . n
A 1 539 ASP 539 539 ? ? ? A . n
A 1 540 SER 540 540 ? ? ? A . n
A 1 541 ASP 541 541 ? ? ? A . n
A 1 542 GLU 542 542 ? ? ? A . n
A 1 543 GLU 543 543 ? ? ? A . n
A 1 544 ARG 544 544 ? ? ? A . n
A 1 545 MET 545 545 ? ? ? A . n
A 1 546 ILE 546 546 ? ? ? A . n
A 1 547 THR 547 547 ? ? ? A . n
A 1 548 HIS 548 548 ? ? ? A . n
A 1 549 PHE 549 549 ? ? ? A . n
A 1 550 GLU 550 550 ? ? ? A . n
A 1 551 ARG 551 551 ? ? ? A . n
A 1 552 SER 552 552 ? ? ? A . n
A 1 553 LYS 553 553 ? ? ? A . n
A 1 554 MET 554 554 ? ? ? A . n
A 1 555 GLU 555 555 ? ? ? A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NAG 1 B NAG 1 A NAG 486 n
B 2 NAG 2 B NAG 2 A NAG 487 n
C 2 NAG 1 C NAG 1 A NAG 602 n
C 2 NAG 2 C NAG 2 A NAG 603 n
D 3 NAG 1 D NAG 1 A NAG 604 n
D 3 NAG 2 D NAG 2 A NAG 605 n
D 3 BMA 3 D BMA 3 A BMA 606 n
#
loop_
_pdbx_entity_instance_feature.ordinal
_pdbx_entity_instance_feature.comp_id
_pdbx_entity_instance_feature.asym_id
_pdbx_entity_instance_feature.seq_num
_pdbx_entity_instance_feature.auth_comp_id
_pdbx_entity_instance_feature.auth_asym_id
_pdbx_entity_instance_feature.auth_seq_num
_pdbx_entity_instance_feature.feature_type
_pdbx_entity_instance_feature.details
1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ?
2 CLR ? ? CLR ? ? 'SUBJECT OF INVESTIGATION' ?
3 L9Q ? ? L9Q ? ? 'SUBJECT OF INVESTIGATION' ?
4 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ?
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 L9Q 1 601 607 L9Q L9Q A .
F 5 CLR 1 602 701 CLR CLR A .
G 5 CLR 1 603 801 CLR CLR A .
#
_software.citation_id ?
_software.classification refinement
_software.compiler_name ?
_software.compiler_version ?
_software.contact_author ?
_software.contact_author_email ?
_software.date ?
_software.description ?
_software.dependencies ?
_software.hardware ?
_software.language ?
_software.location ?
_software.mods ?
_software.name PHENIX
_software.os ?
_software.os_version ?
_software.type ?
_software.version 1.19_4092:
_software.pdbx_ordinal 1
#
_cell.angle_alpha 90.00
_cell.angle_alpha_esd ?
_cell.angle_beta 90.00
_cell.angle_beta_esd ?
_cell.angle_gamma 90.00
_cell.angle_gamma_esd ?
_cell.entry_id 8HSI
_cell.details ?
_cell.formula_units_Z ?
_cell.length_a 1.00
_cell.length_a_esd ?
_cell.length_b 1.00
_cell.length_b_esd ?
_cell.length_c 1.00
_cell.length_c_esd ?
_cell.volume ?
_cell.volume_esd ?
_cell.Z_PDB ?
_cell.reciprocal_angle_alpha ?
_cell.reciprocal_angle_beta ?
_cell.reciprocal_angle_gamma ?
_cell.reciprocal_angle_alpha_esd ?
_cell.reciprocal_angle_beta_esd ?
_cell.reciprocal_angle_gamma_esd ?
_cell.reciprocal_length_a ?
_cell.reciprocal_length_b ?
_cell.reciprocal_length_c ?
_cell.reciprocal_length_a_esd ?
_cell.reciprocal_length_b_esd ?
_cell.reciprocal_length_c_esd ?
_cell.pdbx_unique_axis ?
_cell.pdbx_esd_method ?
#
_symmetry.entry_id 8HSI
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 1
_symmetry.space_group_name_Hall ?
_symmetry.space_group_name_H-M 'P 1'
_symmetry.pdbx_full_space_group_name_H-M ?
#
_exptl.absorpt_coefficient_mu ?
_exptl.absorpt_correction_T_max ?
_exptl.absorpt_correction_T_min ?
_exptl.absorpt_correction_type ?
_exptl.absorpt_process_details ?
_exptl.entry_id 8HSI
_exptl.crystals_number ?
_exptl.details ?
_exptl.method 'ELECTRON MICROSCOPY'
_exptl.method_details ?
#
_refine.pdbx_refine_id 'ELECTRON MICROSCOPY'
_refine.entry_id 8HSI
_refine.pdbx_diffrn_id ?
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs ?
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low ?
_refine.ls_d_res_high .
_refine.ls_percent_reflns_obs ?
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work ?
_refine.ls_R_factor_R_free ?
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free ?
_refine.ls_number_reflns_R_free ?
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean ?
_refine.aniso_B[1][1] ?
_refine.aniso_B[2][2] ?
_refine.aniso_B[3][3] ?
_refine.aniso_B[1][2] ?
_refine.aniso_B[1][3] ?
_refine.aniso_B[2][3] ?
_refine.solvent_model_details ?
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method ?
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct ?
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
loop_
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.criterion
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.number
_refine_ls_restr.rejects
_refine_ls_restr.type
_refine_ls_restr.weight
_refine_ls_restr.pdbx_restraint_function
'ELECTRON MICROSCOPY' ? 0.004 ? 3619 ? f_bond_d ? ?
'ELECTRON MICROSCOPY' ? 1.081 ? 4908 ? f_angle_d ? ?
'ELECTRON MICROSCOPY' ? 16.234 ? 539 ? f_dihedral_angle_d ? ?
'ELECTRON MICROSCOPY' ? 0.285 ? 577 ? f_chiral_restr ? ?
'ELECTRON MICROSCOPY' ? 0.004 ? 567 ? f_plane_restr ? ?
#
_struct.entry_id 8HSI
_struct.title 'Cryo-EM structure of human TMEM87A, PE-bound'
_struct.pdbx_model_details ?
_struct.pdbx_formula_weight ?
_struct.pdbx_formula_weight_method ?
_struct.pdbx_model_type_details ?
_struct.pdbx_CASP_flag N
#
_struct_keywords.entry_id 8HSI
_struct_keywords.text 'non-selective cation channel, ion channel, membrane protein, Golgi-localized protein'
_struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 2 ?
D N N 3 ?
E N N 4 ?
F N N 5 ?
G N N 5 ?
#
_struct_ref.id 1
_struct_ref.db_name UNP
_struct_ref.db_code TM87A_HUMAN
_struct_ref.pdbx_db_accession Q8NBN3
_struct_ref.pdbx_db_isoform ?
_struct_ref.entity_id 1
_struct_ref.pdbx_seq_one_letter_code
;MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNI
TWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTN
LTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLF
GVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYG
IVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSL
YRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEE
DEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME
;
_struct_ref.pdbx_align_begin 1
#
_struct_ref_seq.align_id 1
_struct_ref_seq.ref_id 1
_struct_ref_seq.pdbx_PDB_id_code 8HSI
_struct_ref_seq.pdbx_strand_id A
_struct_ref_seq.seq_align_beg 1
_struct_ref_seq.pdbx_seq_align_beg_ins_code ?
_struct_ref_seq.seq_align_end 555
_struct_ref_seq.pdbx_seq_align_end_ins_code ?
_struct_ref_seq.pdbx_db_accession Q8NBN3
_struct_ref_seq.db_align_beg 1
_struct_ref_seq.pdbx_db_align_beg_ins_code ?
_struct_ref_seq.db_align_end 555
_struct_ref_seq.pdbx_db_align_end_ins_code ?
_struct_ref_seq.pdbx_auth_seq_align_beg 1
_struct_ref_seq.pdbx_auth_seq_align_end 555
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_defined_assembly
_pdbx_struct_assembly.method_details ?
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G
#
_pdbx_struct_assembly_auth_evidence.id 1
_pdbx_struct_assembly_auth_evidence.assembly_id 1
_pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration'
_pdbx_struct_assembly_auth_evidence.details ?
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation ?
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 AA1 TYR A 90 ? ASN A 95 ? TYR A 90 ASN A 95 1 ? 6
HELX_P HELX_P2 AA2 LYS A 97 ? GLU A 99 ? LYS A 97 GLU A 99 5 ? 3
HELX_P HELX_P3 AA3 GLU A 100 ? LEU A 108 ? GLU A 100 LEU A 108 1 ? 9
HELX_P HELX_P4 AA4 ASP A 223 ? TYR A 251 ? ASP A 223 TYR A 251 1 ? 29
HELX_P HELX_P5 AA5 ARG A 257 ? GLY A 287 ? ARG A 257 GLY A 287 1 ? 31
HELX_P HELX_P6 AA6 ALA A 293 ? LEU A 317 ? ALA A 293 LEU A 317 1 ? 25
HELX_P HELX_P7 AA7 VAL A 334 ? GLY A 337 ? VAL A 334 GLY A 337 5 ? 4
HELX_P HELX_P8 AA8 ALA A 338 ? THR A 353 ? ALA A 338 THR A 353 1 ? 16
HELX_P HELX_P9 AA9 LEU A 359 ? ARG A 392 ? LEU A 359 ARG A 392 1 ? 34
HELX_P HELX_P10 AB1 ILE A 395 ? PHE A 426 ? ILE A 395 PHE A 426 1 ? 32
HELX_P HELX_P11 AB2 TRP A 439 ? ASP A 442 ? TRP A 439 ASP A 442 5 ? 4
HELX_P HELX_P12 AB3 ALA A 443 ? TRP A 460 ? ALA A 443 TRP A 460 1 ? 18
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 74 SG ? ? ? 1_555 A CYS 128 SG ? ? A CYS 74 A CYS 128 1_555 ? ? ? ? ? ? ? 2.023 ? ?
disulf2 disulf ? ? A CYS 89 SG ? ? ? 1_555 A CYS 431 SG ? ? A CYS 89 A CYS 431 1_555 ? ? ? ? ? ? ? 2.035 ? ?
covale1 covale one ? A ASN 62 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 62 C NAG 1 1_555 ? ? ? ? ? ? ? 1.438 ? N-Glycosylation
covale2 covale one ? A ASN 79 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 79 B NAG 1 1_555 ? ? ? ? ? ? ? 1.439 ? N-Glycosylation
covale3 covale one ? A ASN 127 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 127 D NAG 1 1_555 ? ? ? ? ? ? ? 1.435 ? N-Glycosylation
covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.442 ? ?
covale5 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.440 ? ?
covale6 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.437 ? ?
covale7 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.439 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 NAG B . ? ASN A 79 ? NAG B 1 ? 1_555 ASN A 79 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
2 NAG C . ? ASN A 62 ? NAG C 1 ? 1_555 ASN A 62 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
3 NAG D . ? ASN A 127 ? NAG D 1 ? 1_555 ASN A 127 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate
4 CYS A 74 ? CYS A 128 ? CYS A 74 ? 1_555 CYS A 128 ? 1_555 SG SG . . . None 'Disulfide bridge'
5 CYS A 89 ? CYS A 431 ? CYS A 89 ? 1_555 CYS A 431 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA1 ? 3 ?
AA2 ? 4 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA1 1 2 ? anti-parallel
AA1 2 3 ? anti-parallel
AA2 1 2 ? anti-parallel
AA2 2 3 ? anti-parallel
AA2 3 4 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA1 1 LYS A 41 ? ILE A 44 ? LYS A 41 ILE A 44
AA1 2 PHE A 206 ? LYS A 213 ? PHE A 206 LYS A 213
AA1 3 THR A 64 ? GLY A 71 ? THR A 64 GLY A 71
AA2 1 TYR A 52 ? LEU A 59 ? TYR A 52 LEU A 59
AA2 2 ALA A 180 ? SER A 191 ? ALA A 180 SER A 191
AA2 3 SER A 77 ? LYS A 85 ? SER A 77 LYS A 85
AA2 4 TYR A 118 ? PHE A 125 ? TYR A 118 PHE A 125
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA1 1 2 N ILE A 44 ? N ILE A 44 O MET A 208 ? O MET A 208
AA1 2 3 O LYS A 213 ? O LYS A 213 N THR A 64 ? N THR A 64
AA2 1 2 N LYS A 57 ? N LYS A 57 O TYR A 182 ? O TYR A 182
AA2 2 3 O HIS A 187 ? O HIS A 187 N THR A 81 ? N THR A 81
AA2 3 4 N LEU A 78 ? N LEU A 78 O PHE A 125 ? O PHE A 125
#
_pdbx_entry_details.entry_id 8HSI
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.has_ligand_of_interest Y
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 PRO A 47 ? ? -67.50 76.76
2 1 CYS A 128 ? ? -145.41 -28.30
3 1 GLN A 178 ? ? -170.97 143.67
4 1 GLU A 222 ? ? 77.44 -6.33
5 1 ALA A 293 ? ? -130.82 -61.43
6 1 THR A 329 ? ? -121.55 -55.35
7 1 LYS A 332 ? ? 75.15 -5.67
8 1 VAL A 333 ? ? -124.01 -62.65
9 1 THR A 357 ? ? -97.60 32.97
10 1 ARG A 393 ? ? 62.39 60.55
11 1 PHE A 426 ? ? -93.92 -60.30
12 1 ARG A 427 ? ? -94.97 47.51
13 1 GLU A 437 ? ? -94.46 56.66
14 1 ASN A 466 ? ? -90.57 56.56
15 1 GLN A 467 ? ? -143.87 -0.94
16 1 PHE A 469 ? ? -97.94 30.92
#
_em_3d_fitting.id 1
_em_3d_fitting.entry_id 8HSI
_em_3d_fitting.method ?
_em_3d_fitting.target_criteria ?
_em_3d_fitting.details
;Chimera Fit in map tool was used for initial local fitting. Then, Real-space refinement with the rigid body option in PHENIX was used for flexible fitting.
;
_em_3d_fitting.overall_b_value 40
_em_3d_fitting.ref_space REAL
_em_3d_fitting.ref_protocol 'RIGID BODY FIT'
#
_em_3d_reconstruction.entry_id 8HSI
_em_3d_reconstruction.id 1
_em_3d_reconstruction.method ?
_em_3d_reconstruction.algorithm 'FOURIER SPACE'
_em_3d_reconstruction.citation_id ?
_em_3d_reconstruction.details
'Non-uniform refinement and CTF refinement were used to improve the particle alignment and map quality.'
_em_3d_reconstruction.resolution 3.1
_em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF'
_em_3d_reconstruction.magnification_calibration ?
_em_3d_reconstruction.nominal_pixel_size ?
_em_3d_reconstruction.actual_pixel_size ?
_em_3d_reconstruction.num_particles 445198
_em_3d_reconstruction.euler_angles_details ?
_em_3d_reconstruction.num_class_averages 1
_em_3d_reconstruction.refinement_type ?
_em_3d_reconstruction.image_processing_id 1
_em_3d_reconstruction.symmetry_type POINT
#
_em_buffer.id 1
_em_buffer.specimen_id 1
_em_buffer.name ?
_em_buffer.details '50mM Tris pH 9.0, 250mM NaCl, 0.01% (w/v) LMNG, 0.002% (w/v) CHS'
_em_buffer.pH 9.0
#
_em_entity_assembly.id 1
_em_entity_assembly.parent_id 0
_em_entity_assembly.source RECOMBINANT
_em_entity_assembly.type 'ORGANELLE OR CELLULAR COMPONENT'
_em_entity_assembly.name 'Transmembrane protein 87A with GFP tag and Twin-strep tag'
_em_entity_assembly.details
'Transmembrane protein 87A with GFP tag and Twin-strep tag purified with detergent LMNG/CHS'
_em_entity_assembly.synonym ?
_em_entity_assembly.oligomeric_details ?
_em_entity_assembly.entity_id_list 1
#
_em_image_scans.entry_id 8HSI
_em_image_scans.id 1
_em_image_scans.number_digital_images ?
_em_image_scans.details ?
_em_image_scans.scanner_model ?
_em_image_scans.sampling_size ?
_em_image_scans.od_range ?
_em_image_scans.quant_bit_size ?
_em_image_scans.citation_id ?
_em_image_scans.dimension_height 4092
_em_image_scans.dimension_width 5760
_em_image_scans.frames_per_image ?
_em_image_scans.image_recording_id 1
_em_image_scans.used_frames_per_image ?
#
_em_imaging.entry_id 8HSI
_em_imaging.id 1
_em_imaging.astigmatism ?
_em_imaging.electron_beam_tilt_params ?
_em_imaging.residual_tilt 10
_em_imaging.microscope_model 'FEI TITAN KRIOS'
_em_imaging.specimen_holder_type ?
_em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER'
_em_imaging.details 'Using Zemlin tableau in sherpa'
_em_imaging.date ?
_em_imaging.accelerating_voltage 300
_em_imaging.illumination_mode 'FLOOD BEAM'
_em_imaging.mode 'BRIGHT FIELD'
_em_imaging.nominal_cs 2.7
_em_imaging.nominal_defocus_min 800
_em_imaging.nominal_defocus_max 1900
_em_imaging.calibrated_defocus_min ?
_em_imaging.calibrated_defocus_max ?
_em_imaging.tilt_angle_min ?
_em_imaging.tilt_angle_max ?
_em_imaging.nominal_magnification 105000
_em_imaging.calibrated_magnification 58900
_em_imaging.electron_source 'FIELD EMISSION GUN'
_em_imaging.citation_id ?
_em_imaging.temperature ?
_em_imaging.detector_distance ?
_em_imaging.recording_temperature_minimum ?
_em_imaging.recording_temperature_maximum ?
_em_imaging.alignment_procedure 'COMA FREE'
_em_imaging.c2_aperture_diameter 70
_em_imaging.specimen_id 1
_em_imaging.cryogen NITROGEN
#
_em_sample_support.id 1
_em_sample_support.film_material ?
_em_sample_support.method ?
_em_sample_support.grid_material COPPER
_em_sample_support.grid_mesh_size 200
_em_sample_support.grid_type 'Quantifoil R1.2/1.3'
_em_sample_support.details 15mA
_em_sample_support.specimen_id 1
_em_sample_support.citation_id ?
#
_em_vitrification.entry_id 8HSI
_em_vitrification.id 1
_em_vitrification.specimen_id 1
_em_vitrification.cryogen_name ETHANE
_em_vitrification.humidity 100
_em_vitrification.temp ?
_em_vitrification.chamber_temperature 277
_em_vitrification.instrument 'FEI VITROBOT MARK IV'
_em_vitrification.method ?
_em_vitrification.time_resolved_state ?
_em_vitrification.citation_id ?
_em_vitrification.details ?
#
_em_experiment.entry_id 8HSI
_em_experiment.id 1
_em_experiment.reconstruction_method 'SINGLE PARTICLE'
_em_experiment.aggregation_state PARTICLE
_em_experiment.entity_assembly_id 1
#
_em_single_particle_entity.entry_id 8HSI
_em_single_particle_entity.id 1
_em_single_particle_entity.image_processing_id 1
_em_single_particle_entity.point_symmetry C1
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A MET 1 ? A MET 1
2 1 Y 1 A ALA 2 ? A ALA 2
3 1 Y 1 A ALA 3 ? A ALA 3
4 1 Y 1 A ALA 4 ? A ALA 4
5 1 Y 1 A ALA 5 ? A ALA 5
6 1 Y 1 A TRP 6 ? A TRP 6
7 1 Y 1 A LEU 7 ? A LEU 7
8 1 Y 1 A GLN 8 ? A GLN 8
9 1 Y 1 A VAL 9 ? A VAL 9
10 1 Y 1 A LEU 10 ? A LEU 10
11 1 Y 1 A PRO 11 ? A PRO 11
12 1 Y 1 A VAL 12 ? A VAL 12
13 1 Y 1 A ILE 13 ? A ILE 13
14 1 Y 1 A LEU 14 ? A LEU 14
15 1 Y 1 A LEU 15 ? A LEU 15
16 1 Y 1 A LEU 16 ? A LEU 16
17 1 Y 1 A LEU 17 ? A LEU 17
18 1 Y 1 A GLY 18 ? A GLY 18
19 1 Y 1 A ALA 19 ? A ALA 19
20 1 Y 1 A HIS 20 ? A HIS 20
21 1 Y 1 A PRO 21 ? A PRO 21
22 1 Y 1 A SER 22 ? A SER 22
23 1 Y 1 A PRO 23 ? A PRO 23
24 1 Y 1 A LEU 24 ? A LEU 24
25 1 Y 1 A SER 25 ? A SER 25
26 1 Y 1 A PHE 26 ? A PHE 26
27 1 Y 1 A PHE 27 ? A PHE 27
28 1 Y 1 A SER 28 ? A SER 28
29 1 Y 1 A ALA 29 ? A ALA 29
30 1 Y 1 A GLY 30 ? A GLY 30
31 1 Y 1 A PRO 31 ? A PRO 31
32 1 Y 1 A ALA 32 ? A ALA 32
33 1 Y 1 A THR 33 ? A THR 33
34 1 Y 1 A VAL 34 ? A VAL 34
35 1 Y 1 A ALA 35 ? A ALA 35
36 1 Y 1 A ALA 36 ? A ALA 36
37 1 Y 1 A ALA 37 ? A ALA 37
38 1 Y 1 A LEU 147 ? A LEU 147
39 1 Y 1 A LEU 148 ? A LEU 148
40 1 Y 1 A GLY 149 ? A GLY 149
41 1 Y 1 A GLU 150 ? A GLU 150
42 1 Y 1 A LYS 151 ? A LYS 151
43 1 Y 1 A GLN 152 ? A GLN 152
44 1 Y 1 A GLU 153 ? A GLU 153
45 1 Y 1 A ALA 154 ? A ALA 154
46 1 Y 1 A LYS 155 ? A LYS 155
47 1 Y 1 A GLU 156 ? A GLU 156
48 1 Y 1 A ASN 157 ? A ASN 157
49 1 Y 1 A GLY 158 ? A GLY 158
50 1 Y 1 A THR 159 ? A THR 159
51 1 Y 1 A ASN 160 ? A ASN 160
52 1 Y 1 A LEU 161 ? A LEU 161
53 1 Y 1 A THR 162 ? A THR 162
54 1 Y 1 A PHE 163 ? A PHE 163
55 1 Y 1 A ILE 164 ? A ILE 164
56 1 Y 1 A GLY 165 ? A GLY 165
57 1 Y 1 A ASP 166 ? A ASP 166
58 1 Y 1 A LYS 167 ? A LYS 167
59 1 Y 1 A SER 193 ? A SER 193
60 1 Y 1 A LYS 194 ? A LYS 194
61 1 Y 1 A GLU 195 ? A GLU 195
62 1 Y 1 A SER 196 ? A SER 196
63 1 Y 1 A SER 197 ? A SER 197
64 1 Y 1 A LYS 198 ? A LYS 198
65 1 Y 1 A GLU 199 ? A GLU 199
66 1 Y 1 A ASN 200 ? A ASN 200
67 1 Y 1 A SER 201 ? A SER 201
68 1 Y 1 A LEU 202 ? A LEU 202
69 1 Y 1 A LEU 474 ? A LEU 474
70 1 Y 1 A SER 475 ? A SER 475
71 1 Y 1 A GLU 476 ? A GLU 476
72 1 Y 1 A GLU 477 ? A GLU 477
73 1 Y 1 A GLU 478 ? A GLU 478
74 1 Y 1 A GLU 479 ? A GLU 479
75 1 Y 1 A GLU 480 ? A GLU 480
76 1 Y 1 A ASP 481 ? A ASP 481
77 1 Y 1 A GLU 482 ? A GLU 482
78 1 Y 1 A GLN 483 ? A GLN 483
79 1 Y 1 A LYS 484 ? A LYS 484
80 1 Y 1 A GLU 485 ? A GLU 485
81 1 Y 1 A PRO 486 ? A PRO 486
82 1 Y 1 A MET 487 ? A MET 487
83 1 Y 1 A LEU 488 ? A LEU 488
84 1 Y 1 A LYS 489 ? A LYS 489
85 1 Y 1 A GLU 490 ? A GLU 490
86 1 Y 1 A SER 491 ? A SER 491
87 1 Y 1 A PHE 492 ? A PHE 492
88 1 Y 1 A GLU 493 ? A GLU 493
89 1 Y 1 A GLY 494 ? A GLY 494
90 1 Y 1 A MET 495 ? A MET 495
91 1 Y 1 A LYS 496 ? A LYS 496
92 1 Y 1 A MET 497 ? A MET 497
93 1 Y 1 A ARG 498 ? A ARG 498
94 1 Y 1 A SER 499 ? A SER 499
95 1 Y 1 A THR 500 ? A THR 500
96 1 Y 1 A LYS 501 ? A LYS 501
97 1 Y 1 A GLN 502 ? A GLN 502
98 1 Y 1 A GLU 503 ? A GLU 503
99 1 Y 1 A PRO 504 ? A PRO 504
100 1 Y 1 A ASN 505 ? A ASN 505
101 1 Y 1 A GLY 506 ? A GLY 506
102 1 Y 1 A ASN 507 ? A ASN 507
103 1 Y 1 A SER 508 ? A SER 508
104 1 Y 1 A LYS 509 ? A LYS 509
105 1 Y 1 A VAL 510 ? A VAL 510
106 1 Y 1 A ASN 511 ? A ASN 511
107 1 Y 1 A LYS 512 ? A LYS 512
108 1 Y 1 A ALA 513 ? A ALA 513
109 1 Y 1 A GLN 514 ? A GLN 514
110 1 Y 1 A GLU 515 ? A GLU 515
111 1 Y 1 A ASP 516 ? A ASP 516
112 1 Y 1 A ASP 517 ? A ASP 517
113 1 Y 1 A LEU 518 ? A LEU 518
114 1 Y 1 A LYS 519 ? A LYS 519
115 1 Y 1 A TRP 520 ? A TRP 520
116 1 Y 1 A VAL 521 ? A VAL 521
117 1 Y 1 A GLU 522 ? A GLU 522
118 1 Y 1 A GLU 523 ? A GLU 523
119 1 Y 1 A ASN 524 ? A ASN 524
120 1 Y 1 A VAL 525 ? A VAL 525
121 1 Y 1 A PRO 526 ? A PRO 526
122 1 Y 1 A SER 527 ? A SER 527
123 1 Y 1 A SER 528 ? A SER 528
124 1 Y 1 A VAL 529 ? A VAL 529
125 1 Y 1 A THR 530 ? A THR 530
126 1 Y 1 A ASP 531 ? A ASP 531
127 1 Y 1 A VAL 532 ? A VAL 532
128 1 Y 1 A ALA 533 ? A ALA 533
129 1 Y 1 A LEU 534 ? A LEU 534
130 1 Y 1 A PRO 535 ? A PRO 535
131 1 Y 1 A ALA 536 ? A ALA 536
132 1 Y 1 A LEU 537 ? A LEU 537
133 1 Y 1 A LEU 538 ? A LEU 538
134 1 Y 1 A ASP 539 ? A ASP 539
135 1 Y 1 A SER 540 ? A SER 540
136 1 Y 1 A ASP 541 ? A ASP 541
137 1 Y 1 A GLU 542 ? A GLU 542
138 1 Y 1 A GLU 543 ? A GLU 543
139 1 Y 1 A ARG 544 ? A ARG 544
140 1 Y 1 A MET 545 ? A MET 545
141 1 Y 1 A ILE 546 ? A ILE 546
142 1 Y 1 A THR 547 ? A THR 547
143 1 Y 1 A HIS 548 ? A HIS 548
144 1 Y 1 A PHE 549 ? A PHE 549
145 1 Y 1 A GLU 550 ? A GLU 550
146 1 Y 1 A ARG 551 ? A ARG 551
147 1 Y 1 A SER 552 ? A SER 552
148 1 Y 1 A LYS 553 ? A LYS 553
149 1 Y 1 A MET 554 ? A MET 554
150 1 Y 1 A GLU 555 ? A GLU 555
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
BMA C1 C N R 74
BMA C2 C N S 75
BMA C3 C N S 76
BMA C4 C N S 77
BMA C5 C N R 78
BMA C6 C N N 79
BMA O1 O N N 80
BMA O2 O N N 81
BMA O3 O N N 82
BMA O4 O N N 83
BMA O5 O N N 84
BMA O6 O N N 85
BMA H1 H N N 86
BMA H2 H N N 87
BMA H3 H N N 88
BMA H4 H N N 89
BMA H5 H N N 90
BMA H61 H N N 91
BMA H62 H N N 92
BMA HO1 H N N 93
BMA HO2 H N N 94
BMA HO3 H N N 95
BMA HO4 H N N 96
BMA HO6 H N N 97
CLR C1 C N N 98
CLR C2 C N N 99
CLR C3 C N S 100
CLR C4 C N N 101
CLR C5 C N N 102
CLR C6 C N N 103
CLR C7 C N N 104
CLR C8 C N S 105
CLR C9 C N S 106
CLR C10 C N R 107
CLR C11 C N N 108
CLR C12 C N N 109
CLR C13 C N R 110
CLR C14 C N S 111
CLR C15 C N N 112
CLR C16 C N N 113
CLR C17 C N R 114
CLR C18 C N N 115
CLR C19 C N N 116
CLR C20 C N R 117
CLR C21 C N N 118
CLR C22 C N N 119
CLR C23 C N N 120
CLR C24 C N N 121
CLR C25 C N N 122
CLR C26 C N N 123
CLR C27 C N N 124
CLR O1 O N N 125
CLR H11 H N N 126
CLR H12 H N N 127
CLR H21 H N N 128
CLR H22 H N N 129
CLR H3 H N N 130
CLR H41 H N N 131
CLR H42 H N N 132
CLR H6 H N N 133
CLR H71 H N N 134
CLR H72 H N N 135
CLR H8 H N N 136
CLR H9 H N N 137
CLR H111 H N N 138
CLR H112 H N N 139
CLR H121 H N N 140
CLR H122 H N N 141
CLR H14 H N N 142
CLR H151 H N N 143
CLR H152 H N N 144
CLR H161 H N N 145
CLR H162 H N N 146
CLR H17 H N N 147
CLR H181 H N N 148
CLR H182 H N N 149
CLR H183 H N N 150
CLR H191 H N N 151
CLR H192 H N N 152
CLR H193 H N N 153
CLR H20 H N N 154
CLR H211 H N N 155
CLR H212 H N N 156
CLR H213 H N N 157
CLR H221 H N N 158
CLR H222 H N N 159
CLR H231 H N N 160
CLR H232 H N N 161
CLR H241 H N N 162
CLR H242 H N N 163
CLR H25 H N N 164
CLR H261 H N N 165
CLR H262 H N N 166
CLR H263 H N N 167
CLR H271 H N N 168
CLR H272 H N N 169
CLR H273 H N N 170
CLR H1 H N N 171
CYS N N N N 172
CYS CA C N R 173
CYS C C N N 174
CYS O O N N 175
CYS CB C N N 176
CYS SG S N N 177
CYS OXT O N N 178
CYS H H N N 179
CYS H2 H N N 180
CYS HA H N N 181
CYS HB2 H N N 182
CYS HB3 H N N 183
CYS HG H N N 184
CYS HXT H N N 185
GLN N N N N 186
GLN CA C N S 187
GLN C C N N 188
GLN O O N N 189
GLN CB C N N 190
GLN CG C N N 191
GLN CD C N N 192
GLN OE1 O N N 193
GLN NE2 N N N 194
GLN OXT O N N 195
GLN H H N N 196
GLN H2 H N N 197
GLN HA H N N 198
GLN HB2 H N N 199
GLN HB3 H N N 200
GLN HG2 H N N 201
GLN HG3 H N N 202
GLN HE21 H N N 203
GLN HE22 H N N 204
GLN HXT H N N 205
GLU N N N N 206
GLU CA C N S 207
GLU C C N N 208
GLU O O N N 209
GLU CB C N N 210
GLU CG C N N 211
GLU CD C N N 212
GLU OE1 O N N 213
GLU OE2 O N N 214
GLU OXT O N N 215
GLU H H N N 216
GLU H2 H N N 217
GLU HA H N N 218
GLU HB2 H N N 219
GLU HB3 H N N 220
GLU HG2 H N N 221
GLU HG3 H N N 222
GLU HE2 H N N 223
GLU HXT H N N 224
GLY N N N N 225
GLY CA C N N 226
GLY C C N N 227
GLY O O N N 228
GLY OXT O N N 229
GLY H H N N 230
GLY H2 H N N 231
GLY HA2 H N N 232
GLY HA3 H N N 233
GLY HXT H N N 234
HIS N N N N 235
HIS CA C N S 236
HIS C C N N 237
HIS O O N N 238
HIS CB C N N 239
HIS CG C Y N 240
HIS ND1 N Y N 241
HIS CD2 C Y N 242
HIS CE1 C Y N 243
HIS NE2 N Y N 244
HIS OXT O N N 245
HIS H H N N 246
HIS H2 H N N 247
HIS HA H N N 248
HIS HB2 H N N 249
HIS HB3 H N N 250
HIS HD1 H N N 251
HIS HD2 H N N 252
HIS HE1 H N N 253
HIS HE2 H N N 254
HIS HXT H N N 255
ILE N N N N 256
ILE CA C N S 257
ILE C C N N 258
ILE O O N N 259
ILE CB C N S 260
ILE CG1 C N N 261
ILE CG2 C N N 262
ILE CD1 C N N 263
ILE OXT O N N 264
ILE H H N N 265
ILE H2 H N N 266
ILE HA H N N 267
ILE HB H N N 268
ILE HG12 H N N 269
ILE HG13 H N N 270
ILE HG21 H N N 271
ILE HG22 H N N 272
ILE HG23 H N N 273
ILE HD11 H N N 274
ILE HD12 H N N 275
ILE HD13 H N N 276
ILE HXT H N N 277
L9Q N N N N 278
L9Q P P N N 279
L9Q C1 C N N 280
L9Q C2 C N S 281
L9Q O2 O N N 282
L9Q C3 C N N 283
L9Q O3 O N N 284
L9Q C4 C N N 285
L9Q C5 C N N 286
L9Q C11 C N N 287
L9Q O11 O N N 288
L9Q C12 C N N 289
L9Q C13 C N N 290
L9Q C14 C N N 291
L9Q C15 C N N 292
L9Q C16 C N N 293
L9Q C17 C N N 294
L9Q C18 C N N 295
L9Q C19 C N N 296
L9Q O1P O N N 297
L9Q C20 C N N 298
L9Q C21 C N N 299
L9Q C22 C N N 300
L9Q C23 C N N 301
L9Q C24 C N N 302
L9Q C25 C N N 303
L9Q C26 C N N 304
L9Q C27 C N N 305
L9Q C28 C N N 306
L9Q O2P O N N 307
L9Q C31 C N N 308
L9Q O31 O N N 309
L9Q C32 C N N 310
L9Q C33 C N N 311
L9Q C34 C N N 312
L9Q C35 C N N 313
L9Q C36 C N N 314
L9Q C37 C N N 315
L9Q C38 C N N 316
L9Q C39 C N N 317
L9Q O3P O N N 318
L9Q C40 C N N 319
L9Q C41 C N N 320
L9Q C42 C N N 321
L9Q C43 C N N 322
L9Q C44 C N N 323
L9Q C45 C N N 324
L9Q C46 C N N 325
L9Q C47 C N N 326
L9Q C48 C N N 327
L9Q O4P O N N 328
L9Q HN H N N 329
L9Q HNA H N N 330
L9Q H1 H N N 331
L9Q H1A H N N 332
L9Q H2 H N N 333
L9Q H3 H N N 334
L9Q H3A H N N 335
L9Q H4 H N N 336
L9Q H4A H N N 337
L9Q H5 H N N 338
L9Q H5A H N N 339
L9Q H12 H N N 340
L9Q H12A H N N 341
L9Q H13 H N N 342
L9Q H13A H N N 343
L9Q H14 H N N 344
L9Q H14A H N N 345
L9Q H15 H N N 346
L9Q H15A H N N 347
L9Q H16 H N N 348
L9Q H16A H N N 349
L9Q H17 H N N 350
L9Q H17A H N N 351
L9Q H18 H N N 352
L9Q H18A H N N 353
L9Q H19 H N N 354
L9Q H19A H N N 355
L9Q H20 H N N 356
L9Q H20A H N N 357
L9Q H21 H N N 358
L9Q H21A H N N 359
L9Q H22 H N N 360
L9Q H22A H N N 361
L9Q H23 H N N 362
L9Q H23A H N N 363
L9Q H24 H N N 364
L9Q H24A H N N 365
L9Q H25 H N N 366
L9Q H25A H N N 367
L9Q H26 H N N 368
L9Q H26A H N N 369
L9Q H27 H N N 370
L9Q H27A H N N 371
L9Q H28 H N N 372
L9Q H28A H N N 373
L9Q H28B H N N 374
L9Q HO2P H N N 375
L9Q H32 H N N 376
L9Q H32A H N N 377
L9Q H33 H N N 378
L9Q H33A H N N 379
L9Q H34 H N N 380
L9Q H34A H N N 381
L9Q H35 H N N 382
L9Q H35A H N N 383
L9Q H36 H N N 384
L9Q H36A H N N 385
L9Q H37 H N N 386
L9Q H37A H N N 387
L9Q H38 H N N 388
L9Q H38A H N N 389
L9Q H39 H N N 390
L9Q H40 H N N 391
L9Q H41 H N N 392
L9Q H41A H N N 393
L9Q H42 H N N 394
L9Q H42A H N N 395
L9Q H43 H N N 396
L9Q H43A H N N 397
L9Q H44 H N N 398
L9Q H44A H N N 399
L9Q H45 H N N 400
L9Q H45A H N N 401
L9Q H46 H N N 402
L9Q H46A H N N 403
L9Q H47 H N N 404
L9Q H47A H N N 405
L9Q H48 H N N 406
L9Q H48A H N N 407
L9Q H48B H N N 408
LEU N N N N 409
LEU CA C N S 410
LEU C C N N 411
LEU O O N N 412
LEU CB C N N 413
LEU CG C N N 414
LEU CD1 C N N 415
LEU CD2 C N N 416
LEU OXT O N N 417
LEU H H N N 418
LEU H2 H N N 419
LEU HA H N N 420
LEU HB2 H N N 421
LEU HB3 H N N 422
LEU HG H N N 423
LEU HD11 H N N 424
LEU HD12 H N N 425
LEU HD13 H N N 426
LEU HD21 H N N 427
LEU HD22 H N N 428
LEU HD23 H N N 429
LEU HXT H N N 430
LYS N N N N 431
LYS CA C N S 432
LYS C C N N 433
LYS O O N N 434
LYS CB C N N 435
LYS CG C N N 436
LYS CD C N N 437
LYS CE C N N 438
LYS NZ N N N 439
LYS OXT O N N 440
LYS H H N N 441
LYS H2 H N N 442
LYS HA H N N 443
LYS HB2 H N N 444
LYS HB3 H N N 445
LYS HG2 H N N 446
LYS HG3 H N N 447
LYS HD2 H N N 448
LYS HD3 H N N 449
LYS HE2 H N N 450
LYS HE3 H N N 451
LYS HZ1 H N N 452
LYS HZ2 H N N 453
LYS HZ3 H N N 454
LYS HXT H N N 455
MET N N N N 456
MET CA C N S 457
MET C C N N 458
MET O O N N 459
MET CB C N N 460
MET CG C N N 461
MET SD S N N 462
MET CE C N N 463
MET OXT O N N 464
MET H H N N 465
MET H2 H N N 466
MET HA H N N 467
MET HB2 H N N 468
MET HB3 H N N 469
MET HG2 H N N 470
MET HG3 H N N 471
MET HE1 H N N 472
MET HE2 H N N 473
MET HE3 H N N 474
MET HXT H N N 475
NAG C1 C N R 476
NAG C2 C N R 477
NAG C3 C N R 478
NAG C4 C N S 479
NAG C5 C N R 480
NAG C6 C N N 481
NAG C7 C N N 482
NAG C8 C N N 483
NAG N2 N N N 484
NAG O1 O N N 485
NAG O3 O N N 486
NAG O4 O N N 487
NAG O5 O N N 488
NAG O6 O N N 489
NAG O7 O N N 490
NAG H1 H N N 491
NAG H2 H N N 492
NAG H3 H N N 493
NAG H4 H N N 494
NAG H5 H N N 495
NAG H61 H N N 496
NAG H62 H N N 497
NAG H81 H N N 498
NAG H82 H N N 499
NAG H83 H N N 500
NAG HN2 H N N 501
NAG HO1 H N N 502
NAG HO3 H N N 503
NAG HO4 H N N 504
NAG HO6 H N N 505
PHE N N N N 506
PHE CA C N S 507
PHE C C N N 508
PHE O O N N 509
PHE CB C N N 510
PHE CG C Y N 511
PHE CD1 C Y N 512
PHE CD2 C Y N 513
PHE CE1 C Y N 514
PHE CE2 C Y N 515
PHE CZ C Y N 516
PHE OXT O N N 517
PHE H H N N 518
PHE H2 H N N 519
PHE HA H N N 520
PHE HB2 H N N 521
PHE HB3 H N N 522
PHE HD1 H N N 523
PHE HD2 H N N 524
PHE HE1 H N N 525
PHE HE2 H N N 526
PHE HZ H N N 527
PHE HXT H N N 528
PRO N N N N 529
PRO CA C N S 530
PRO C C N N 531
PRO O O N N 532
PRO CB C N N 533
PRO CG C N N 534
PRO CD C N N 535
PRO OXT O N N 536
PRO H H N N 537
PRO HA H N N 538
PRO HB2 H N N 539
PRO HB3 H N N 540
PRO HG2 H N N 541
PRO HG3 H N N 542
PRO HD2 H N N 543
PRO HD3 H N N 544
PRO HXT H N N 545
SER N N N N 546
SER CA C N S 547
SER C C N N 548
SER O O N N 549
SER CB C N N 550
SER OG O N N 551
SER OXT O N N 552
SER H H N N 553
SER H2 H N N 554
SER HA H N N 555
SER HB2 H N N 556
SER HB3 H N N 557
SER HG H N N 558
SER HXT H N N 559
THR N N N N 560
THR CA C N S 561
THR C C N N 562
THR O O N N 563
THR CB C N R 564
THR OG1 O N N 565
THR CG2 C N N 566
THR OXT O N N 567
THR H H N N 568
THR H2 H N N 569
THR HA H N N 570
THR HB H N N 571
THR HG1 H N N 572
THR HG21 H N N 573
THR HG22 H N N 574
THR HG23 H N N 575
THR HXT H N N 576
TRP N N N N 577
TRP CA C N S 578
TRP C C N N 579
TRP O O N N 580
TRP CB C N N 581
TRP CG C Y N 582
TRP CD1 C Y N 583
TRP CD2 C Y N 584
TRP NE1 N Y N 585
TRP CE2 C Y N 586
TRP CE3 C Y N 587
TRP CZ2 C Y N 588
TRP CZ3 C Y N 589
TRP CH2 C Y N 590
TRP OXT O N N 591
TRP H H N N 592
TRP H2 H N N 593
TRP HA H N N 594
TRP HB2 H N N 595
TRP HB3 H N N 596
TRP HD1 H N N 597
TRP HE1 H N N 598
TRP HE3 H N N 599
TRP HZ2 H N N 600
TRP HZ3 H N N 601
TRP HH2 H N N 602
TRP HXT H N N 603
TYR N N N N 604
TYR CA C N S 605
TYR C C N N 606
TYR O O N N 607
TYR CB C N N 608
TYR CG C Y N 609
TYR CD1 C Y N 610
TYR CD2 C Y N 611
TYR CE1 C Y N 612
TYR CE2 C Y N 613
TYR CZ C Y N 614
TYR OH O N N 615
TYR OXT O N N 616
TYR H H N N 617
TYR H2 H N N 618
TYR HA H N N 619
TYR HB2 H N N 620
TYR HB3 H N N 621
TYR HD1 H N N 622
TYR HD2 H N N 623
TYR HE1 H N N 624
TYR HE2 H N N 625
TYR HH H N N 626
TYR HXT H N N 627
VAL N N N N 628
VAL CA C N S 629
VAL C C N N 630
VAL O O N N 631
VAL CB C N N 632
VAL CG1 C N N 633
VAL CG2 C N N 634
VAL OXT O N N 635
VAL H H N N 636
VAL H2 H N N 637
VAL HA H N N 638
VAL HB H N N 639
VAL HG11 H N N 640
VAL HG12 H N N 641
VAL HG13 H N N 642
VAL HG21 H N N 643
VAL HG22 H N N 644
VAL HG23 H N N 645
VAL HXT H N N 646
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
BMA C1 C2 sing N N 70
BMA C1 O1 sing N N 71
BMA C1 O5 sing N N 72
BMA C1 H1 sing N N 73
BMA C2 C3 sing N N 74
BMA C2 O2 sing N N 75
BMA C2 H2 sing N N 76
BMA C3 C4 sing N N 77
BMA C3 O3 sing N N 78
BMA C3 H3 sing N N 79
BMA C4 C5 sing N N 80
BMA C4 O4 sing N N 81
BMA C4 H4 sing N N 82
BMA C5 C6 sing N N 83
BMA C5 O5 sing N N 84
BMA C5 H5 sing N N 85
BMA C6 O6 sing N N 86
BMA C6 H61 sing N N 87
BMA C6 H62 sing N N 88
BMA O1 HO1 sing N N 89
BMA O2 HO2 sing N N 90
BMA O3 HO3 sing N N 91
BMA O4 HO4 sing N N 92
BMA O6 HO6 sing N N 93
CLR C1 C2 sing N N 94
CLR C1 C10 sing N N 95
CLR C1 H11 sing N N 96
CLR C1 H12 sing N N 97
CLR C2 C3 sing N N 98
CLR C2 H21 sing N N 99
CLR C2 H22 sing N N 100
CLR C3 C4 sing N N 101
CLR C3 O1 sing N N 102
CLR C3 H3 sing N N 103
CLR C4 C5 sing N N 104
CLR C4 H41 sing N N 105
CLR C4 H42 sing N N 106
CLR C5 C6 doub N N 107
CLR C5 C10 sing N N 108
CLR C6 C7 sing N N 109
CLR C6 H6 sing N N 110
CLR C7 C8 sing N N 111
CLR C7 H71 sing N N 112
CLR C7 H72 sing N N 113
CLR C8 C9 sing N N 114
CLR C8 C14 sing N N 115
CLR C8 H8 sing N N 116
CLR C9 C10 sing N N 117
CLR C9 C11 sing N N 118
CLR C9 H9 sing N N 119
CLR C10 C19 sing N N 120
CLR C11 C12 sing N N 121
CLR C11 H111 sing N N 122
CLR C11 H112 sing N N 123
CLR C12 C13 sing N N 124
CLR C12 H121 sing N N 125
CLR C12 H122 sing N N 126
CLR C13 C14 sing N N 127
CLR C13 C17 sing N N 128
CLR C13 C18 sing N N 129
CLR C14 C15 sing N N 130
CLR C14 H14 sing N N 131
CLR C15 C16 sing N N 132
CLR C15 H151 sing N N 133
CLR C15 H152 sing N N 134
CLR C16 C17 sing N N 135
CLR C16 H161 sing N N 136
CLR C16 H162 sing N N 137
CLR C17 C20 sing N N 138
CLR C17 H17 sing N N 139
CLR C18 H181 sing N N 140
CLR C18 H182 sing N N 141
CLR C18 H183 sing N N 142
CLR C19 H191 sing N N 143
CLR C19 H192 sing N N 144
CLR C19 H193 sing N N 145
CLR C20 C21 sing N N 146
CLR C20 C22 sing N N 147
CLR C20 H20 sing N N 148
CLR C21 H211 sing N N 149
CLR C21 H212 sing N N 150
CLR C21 H213 sing N N 151
CLR C22 C23 sing N N 152
CLR C22 H221 sing N N 153
CLR C22 H222 sing N N 154
CLR C23 C24 sing N N 155
CLR C23 H231 sing N N 156
CLR C23 H232 sing N N 157
CLR C24 C25 sing N N 158
CLR C24 H241 sing N N 159
CLR C24 H242 sing N N 160
CLR C25 C26 sing N N 161
CLR C25 C27 sing N N 162
CLR C25 H25 sing N N 163
CLR C26 H261 sing N N 164
CLR C26 H262 sing N N 165
CLR C26 H263 sing N N 166
CLR C27 H271 sing N N 167
CLR C27 H272 sing N N 168
CLR C27 H273 sing N N 169
CLR O1 H1 sing N N 170
CYS N CA sing N N 171
CYS N H sing N N 172
CYS N H2 sing N N 173
CYS CA C sing N N 174
CYS CA CB sing N N 175
CYS CA HA sing N N 176
CYS C O doub N N 177
CYS C OXT sing N N 178
CYS CB SG sing N N 179
CYS CB HB2 sing N N 180
CYS CB HB3 sing N N 181
CYS SG HG sing N N 182
CYS OXT HXT sing N N 183
GLN N CA sing N N 184
GLN N H sing N N 185
GLN N H2 sing N N 186
GLN CA C sing N N 187
GLN CA CB sing N N 188
GLN CA HA sing N N 189
GLN C O doub N N 190
GLN C OXT sing N N 191
GLN CB CG sing N N 192
GLN CB HB2 sing N N 193
GLN CB HB3 sing N N 194
GLN CG CD sing N N 195
GLN CG HG2 sing N N 196
GLN CG HG3 sing N N 197
GLN CD OE1 doub N N 198
GLN CD NE2 sing N N 199
GLN NE2 HE21 sing N N 200
GLN NE2 HE22 sing N N 201
GLN OXT HXT sing N N 202
GLU N CA sing N N 203
GLU N H sing N N 204
GLU N H2 sing N N 205
GLU CA C sing N N 206
GLU CA CB sing N N 207
GLU CA HA sing N N 208
GLU C O doub N N 209
GLU C OXT sing N N 210
GLU CB CG sing N N 211
GLU CB HB2 sing N N 212
GLU CB HB3 sing N N 213
GLU CG CD sing N N 214
GLU CG HG2 sing N N 215
GLU CG HG3 sing N N 216
GLU CD OE1 doub N N 217
GLU CD OE2 sing N N 218
GLU OE2 HE2 sing N N 219
GLU OXT HXT sing N N 220
GLY N CA sing N N 221
GLY N H sing N N 222
GLY N H2 sing N N 223
GLY CA C sing N N 224
GLY CA HA2 sing N N 225
GLY CA HA3 sing N N 226
GLY C O doub N N 227
GLY C OXT sing N N 228
GLY OXT HXT sing N N 229
HIS N CA sing N N 230
HIS N H sing N N 231
HIS N H2 sing N N 232
HIS CA C sing N N 233
HIS CA CB sing N N 234
HIS CA HA sing N N 235
HIS C O doub N N 236
HIS C OXT sing N N 237
HIS CB CG sing N N 238
HIS CB HB2 sing N N 239
HIS CB HB3 sing N N 240
HIS CG ND1 sing Y N 241
HIS CG CD2 doub Y N 242
HIS ND1 CE1 doub Y N 243
HIS ND1 HD1 sing N N 244
HIS CD2 NE2 sing Y N 245
HIS CD2 HD2 sing N N 246
HIS CE1 NE2 sing Y N 247
HIS CE1 HE1 sing N N 248
HIS NE2 HE2 sing N N 249
HIS OXT HXT sing N N 250
ILE N CA sing N N 251
ILE N H sing N N 252
ILE N H2 sing N N 253
ILE CA C sing N N 254
ILE CA CB sing N N 255
ILE CA HA sing N N 256
ILE C O doub N N 257
ILE C OXT sing N N 258
ILE CB CG1 sing N N 259
ILE CB CG2 sing N N 260
ILE CB HB sing N N 261
ILE CG1 CD1 sing N N 262
ILE CG1 HG12 sing N N 263
ILE CG1 HG13 sing N N 264
ILE CG2 HG21 sing N N 265
ILE CG2 HG22 sing N N 266
ILE CG2 HG23 sing N N 267
ILE CD1 HD11 sing N N 268
ILE CD1 HD12 sing N N 269
ILE CD1 HD13 sing N N 270
ILE OXT HXT sing N N 271
L9Q C5 N sing N N 272
L9Q N HN sing N N 273
L9Q N HNA sing N N 274
L9Q O3P P sing N N 275
L9Q O1P P doub N N 276
L9Q P O2P sing N N 277
L9Q P O4P sing N N 278
L9Q C2 C1 sing N N 279
L9Q O3P C1 sing N N 280
L9Q C1 H1 sing N N 281
L9Q C1 H1A sing N N 282
L9Q C3 C2 sing N N 283
L9Q C2 O2 sing N N 284
L9Q C2 H2 sing N N 285
L9Q C31 O2 sing N N 286
L9Q O3 C3 sing N N 287
L9Q C3 H3 sing N N 288
L9Q C3 H3A sing N N 289
L9Q C11 O3 sing N N 290
L9Q O4P C4 sing N N 291
L9Q C4 C5 sing N N 292
L9Q C4 H4 sing N N 293
L9Q C4 H4A sing N N 294
L9Q C5 H5 sing N N 295
L9Q C5 H5A sing N N 296
L9Q C12 C11 sing N N 297
L9Q O11 C11 doub N N 298
L9Q C12 C13 sing N N 299
L9Q C12 H12 sing N N 300
L9Q C12 H12A sing N N 301
L9Q C14 C13 sing N N 302
L9Q C13 H13 sing N N 303
L9Q C13 H13A sing N N 304
L9Q C15 C14 sing N N 305
L9Q C14 H14 sing N N 306
L9Q C14 H14A sing N N 307
L9Q C16 C15 sing N N 308
L9Q C15 H15 sing N N 309
L9Q C15 H15A sing N N 310
L9Q C16 C17 sing N N 311
L9Q C16 H16 sing N N 312
L9Q C16 H16A sing N N 313
L9Q C17 C18 sing N N 314
L9Q C17 H17 sing N N 315
L9Q C17 H17A sing N N 316
L9Q C19 C18 sing N N 317
L9Q C18 H18 sing N N 318
L9Q C18 H18A sing N N 319
L9Q C19 C20 sing N N 320
L9Q C19 H19 sing N N 321
L9Q C19 H19A sing N N 322
L9Q C21 C20 sing N N 323
L9Q C20 H20 sing N N 324
L9Q C20 H20A sing N N 325
L9Q C21 C22 sing N N 326
L9Q C21 H21 sing N N 327
L9Q C21 H21A sing N N 328
L9Q C23 C22 sing N N 329
L9Q C22 H22 sing N N 330
L9Q C22 H22A sing N N 331
L9Q C23 C24 sing N N 332
L9Q C23 H23 sing N N 333
L9Q C23 H23A sing N N 334
L9Q C25 C24 sing N N 335
L9Q C24 H24 sing N N 336
L9Q C24 H24A sing N N 337
L9Q C25 C26 sing N N 338
L9Q C25 H25 sing N N 339
L9Q C25 H25A sing N N 340
L9Q C27 C26 sing N N 341
L9Q C26 H26 sing N N 342
L9Q C26 H26A sing N N 343
L9Q C28 C27 sing N N 344
L9Q C27 H27 sing N N 345
L9Q C27 H27A sing N N 346
L9Q C28 H28 sing N N 347
L9Q C28 H28A sing N N 348
L9Q C28 H28B sing N N 349
L9Q O2P HO2P sing N N 350
L9Q C32 C31 sing N N 351
L9Q C31 O31 doub N N 352
L9Q C32 C33 sing N N 353
L9Q C32 H32 sing N N 354
L9Q C32 H32A sing N N 355
L9Q C34 C33 sing N N 356
L9Q C33 H33 sing N N 357
L9Q C33 H33A sing N N 358
L9Q C34 C35 sing N N 359
L9Q C34 H34 sing N N 360
L9Q C34 H34A sing N N 361
L9Q C36 C35 sing N N 362
L9Q C35 H35 sing N N 363
L9Q C35 H35A sing N N 364
L9Q C36 C37 sing N N 365
L9Q C36 H36 sing N N 366
L9Q C36 H36A sing N N 367
L9Q C38 C37 sing N N 368
L9Q C37 H37 sing N N 369
L9Q C37 H37A sing N N 370
L9Q C39 C38 sing N Z 371
L9Q C38 H38 sing N N 372
L9Q C38 H38A sing N N 373
L9Q C39 C40 doub N N 374
L9Q C39 H39 sing N N 375
L9Q C40 C41 sing N N 376
L9Q C40 H40 sing N N 377
L9Q C41 C42 sing N N 378
L9Q C41 H41 sing N N 379
L9Q C41 H41A sing N N 380
L9Q C42 C43 sing N N 381
L9Q C42 H42 sing N N 382
L9Q C42 H42A sing N N 383
L9Q C43 C44 sing N N 384
L9Q C43 H43 sing N N 385
L9Q C43 H43A sing N N 386
L9Q C44 C45 sing N N 387
L9Q C44 H44 sing N N 388
L9Q C44 H44A sing N N 389
L9Q C45 C46 sing N N 390
L9Q C45 H45 sing N N 391
L9Q C45 H45A sing N N 392
L9Q C46 C47 sing N N 393
L9Q C46 H46 sing N N 394
L9Q C46 H46A sing N N 395
L9Q C47 C48 sing N N 396
L9Q C47 H47 sing N N 397
L9Q C47 H47A sing N N 398
L9Q C48 H48 sing N N 399
L9Q C48 H48A sing N N 400
L9Q C48 H48B sing N N 401
LEU N CA sing N N 402
LEU N H sing N N 403
LEU N H2 sing N N 404
LEU CA C sing N N 405
LEU CA CB sing N N 406
LEU CA HA sing N N 407
LEU C O doub N N 408
LEU C OXT sing N N 409
LEU CB CG sing N N 410
LEU CB HB2 sing N N 411
LEU CB HB3 sing N N 412
LEU CG CD1 sing N N 413
LEU CG CD2 sing N N 414
LEU CG HG sing N N 415
LEU CD1 HD11 sing N N 416
LEU CD1 HD12 sing N N 417
LEU CD1 HD13 sing N N 418
LEU CD2 HD21 sing N N 419
LEU CD2 HD22 sing N N 420
LEU CD2 HD23 sing N N 421
LEU OXT HXT sing N N 422
LYS N CA sing N N 423
LYS N H sing N N 424
LYS N H2 sing N N 425
LYS CA C sing N N 426
LYS CA CB sing N N 427
LYS CA HA sing N N 428
LYS C O doub N N 429
LYS C OXT sing N N 430
LYS CB CG sing N N 431
LYS CB HB2 sing N N 432
LYS CB HB3 sing N N 433
LYS CG CD sing N N 434
LYS CG HG2 sing N N 435
LYS CG HG3 sing N N 436
LYS CD CE sing N N 437
LYS CD HD2 sing N N 438
LYS CD HD3 sing N N 439
LYS CE NZ sing N N 440
LYS CE HE2 sing N N 441
LYS CE HE3 sing N N 442
LYS NZ HZ1 sing N N 443
LYS NZ HZ2 sing N N 444
LYS NZ HZ3 sing N N 445
LYS OXT HXT sing N N 446
MET N CA sing N N 447
MET N H sing N N 448
MET N H2 sing N N 449
MET CA C sing N N 450
MET CA CB sing N N 451
MET CA HA sing N N 452
MET C O doub N N 453
MET C OXT sing N N 454
MET CB CG sing N N 455
MET CB HB2 sing N N 456
MET CB HB3 sing N N 457
MET CG SD sing N N 458
MET CG HG2 sing N N 459
MET CG HG3 sing N N 460
MET SD CE sing N N 461
MET CE HE1 sing N N 462
MET CE HE2 sing N N 463
MET CE HE3 sing N N 464
MET OXT HXT sing N N 465
NAG C1 C2 sing N N 466
NAG C1 O1 sing N N 467
NAG C1 O5 sing N N 468
NAG C1 H1 sing N N 469
NAG C2 C3 sing N N 470
NAG C2 N2 sing N N 471
NAG C2 H2 sing N N 472
NAG C3 C4 sing N N 473
NAG C3 O3 sing N N 474
NAG C3 H3 sing N N 475
NAG C4 C5 sing N N 476
NAG C4 O4 sing N N 477
NAG C4 H4 sing N N 478
NAG C5 C6 sing N N 479
NAG C5 O5 sing N N 480
NAG C5 H5 sing N N 481
NAG C6 O6 sing N N 482
NAG C6 H61 sing N N 483
NAG C6 H62 sing N N 484
NAG C7 C8 sing N N 485
NAG C7 N2 sing N N 486
NAG C7 O7 doub N N 487
NAG C8 H81 sing N N 488
NAG C8 H82 sing N N 489
NAG C8 H83 sing N N 490
NAG N2 HN2 sing N N 491
NAG O1 HO1 sing N N 492
NAG O3 HO3 sing N N 493
NAG O4 HO4 sing N N 494
NAG O6 HO6 sing N N 495
PHE N CA sing N N 496
PHE N H sing N N 497
PHE N H2 sing N N 498
PHE CA C sing N N 499
PHE CA CB sing N N 500
PHE CA HA sing N N 501
PHE C O doub N N 502
PHE C OXT sing N N 503
PHE CB CG sing N N 504
PHE CB HB2 sing N N 505
PHE CB HB3 sing N N 506
PHE CG CD1 doub Y N 507
PHE CG CD2 sing Y N 508
PHE CD1 CE1 sing Y N 509
PHE CD1 HD1 sing N N 510
PHE CD2 CE2 doub Y N 511
PHE CD2 HD2 sing N N 512
PHE CE1 CZ doub Y N 513
PHE CE1 HE1 sing N N 514
PHE CE2 CZ sing Y N 515
PHE CE2 HE2 sing N N 516
PHE CZ HZ sing N N 517
PHE OXT HXT sing N N 518
PRO N CA sing N N 519
PRO N CD sing N N 520
PRO N H sing N N 521
PRO CA C sing N N 522
PRO CA CB sing N N 523
PRO CA HA sing N N 524
PRO C O doub N N 525
PRO C OXT sing N N 526
PRO CB CG sing N N 527
PRO CB HB2 sing N N 528
PRO CB HB3 sing N N 529
PRO CG CD sing N N 530
PRO CG HG2 sing N N 531
PRO CG HG3 sing N N 532
PRO CD HD2 sing N N 533
PRO CD HD3 sing N N 534
PRO OXT HXT sing N N 535
SER N CA sing N N 536
SER N H sing N N 537
SER N H2 sing N N 538
SER CA C sing N N 539
SER CA CB sing N N 540
SER CA HA sing N N 541
SER C O doub N N 542
SER C OXT sing N N 543
SER CB OG sing N N 544
SER CB HB2 sing N N 545
SER CB HB3 sing N N 546
SER OG HG sing N N 547
SER OXT HXT sing N N 548
THR N CA sing N N 549
THR N H sing N N 550
THR N H2 sing N N 551
THR CA C sing N N 552
THR CA CB sing N N 553
THR CA HA sing N N 554
THR C O doub N N 555
THR C OXT sing N N 556
THR CB OG1 sing N N 557
THR CB CG2 sing N N 558
THR CB HB sing N N 559
THR OG1 HG1 sing N N 560
THR CG2 HG21 sing N N 561
THR CG2 HG22 sing N N 562
THR CG2 HG23 sing N N 563
THR OXT HXT sing N N 564
TRP N CA sing N N 565
TRP N H sing N N 566
TRP N H2 sing N N 567
TRP CA C sing N N 568
TRP CA CB sing N N 569
TRP CA HA sing N N 570
TRP C O doub N N 571
TRP C OXT sing N N 572
TRP CB CG sing N N 573
TRP CB HB2 sing N N 574
TRP CB HB3 sing N N 575
TRP CG CD1 doub Y N 576
TRP CG CD2 sing Y N 577
TRP CD1 NE1 sing Y N 578
TRP CD1 HD1 sing N N 579
TRP CD2 CE2 doub Y N 580
TRP CD2 CE3 sing Y N 581
TRP NE1 CE2 sing Y N 582
TRP NE1 HE1 sing N N 583
TRP CE2 CZ2 sing Y N 584
TRP CE3 CZ3 doub Y N 585
TRP CE3 HE3 sing N N 586
TRP CZ2 CH2 doub Y N 587
TRP CZ2 HZ2 sing N N 588
TRP CZ3 CH2 sing Y N 589
TRP CZ3 HZ3 sing N N 590
TRP CH2 HH2 sing N N 591
TRP OXT HXT sing N N 592
TYR N CA sing N N 593
TYR N H sing N N 594
TYR N H2 sing N N 595
TYR CA C sing N N 596
TYR CA CB sing N N 597
TYR CA HA sing N N 598
TYR C O doub N N 599
TYR C OXT sing N N 600
TYR CB CG sing N N 601
TYR CB HB2 sing N N 602
TYR CB HB3 sing N N 603
TYR CG CD1 doub Y N 604
TYR CG CD2 sing Y N 605
TYR CD1 CE1 sing Y N 606
TYR CD1 HD1 sing N N 607
TYR CD2 CE2 doub Y N 608
TYR CD2 HD2 sing N N 609
TYR CE1 CZ doub Y N 610
TYR CE1 HE1 sing N N 611
TYR CE2 CZ sing Y N 612
TYR CE2 HE2 sing N N 613
TYR CZ OH sing N N 614
TYR OH HH sing N N 615
TYR OXT HXT sing N N 616
VAL N CA sing N N 617
VAL N H sing N N 618
VAL N H2 sing N N 619
VAL CA C sing N N 620
VAL CA CB sing N N 621
VAL CA HA sing N N 622
VAL C O doub N N 623
VAL C OXT sing N N 624
VAL CB CG1 sing N N 625
VAL CB CG2 sing N N 626
VAL CB HB sing N N 627
VAL CG1 HG11 sing N N 628
VAL CG1 HG12 sing N N 629
VAL CG1 HG13 sing N N 630
VAL CG2 HG21 sing N N 631
VAL CG2 HG22 sing N N 632
VAL CG2 HG23 sing N N 633
VAL OXT HXT sing N N 634
#
_em_admin.current_status REL
_em_admin.deposition_date 2022-12-19
_em_admin.deposition_site PDBJ
_em_admin.entry_id 8HSI
_em_admin.last_update 2024-11-13
_em_admin.map_release_date 2023-12-27
_em_admin.title 'Cryo-EM structure of human TMEM87A, PE-bound'
#
loop_
_em_buffer_component.buffer_id
_em_buffer_component.concentration
_em_buffer_component.concentration_units
_em_buffer_component.formula
_em_buffer_component.id
_em_buffer_component.name
1 50 mM Tris 1 trisaminomethane
1 250 mM NaCl 2 'Sodium Chloride'
1 0.01 '% (w/v)' DDM 3 Dodecylmaltoside
1 0.002 '% (w/v)' CHS 4 'Cholesteryl hemisuccinate'
#
_em_ctf_correction.details 'PatchCTF in Cryosparc was used'
_em_ctf_correction.em_image_processing_id 1
_em_ctf_correction.id 1
_em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION'
#
_em_entity_assembly_molwt.entity_assembly_id 1
_em_entity_assembly_molwt.experimental_flag NO
_em_entity_assembly_molwt.id 1
_em_entity_assembly_molwt.units ?
_em_entity_assembly_molwt.value ?
#
_em_entity_assembly_naturalsource.cell ?
_em_entity_assembly_naturalsource.cellular_location ?
_em_entity_assembly_naturalsource.entity_assembly_id 1
_em_entity_assembly_naturalsource.id 2
_em_entity_assembly_naturalsource.ncbi_tax_id 9606
_em_entity_assembly_naturalsource.organism 'Homo sapiens'
_em_entity_assembly_naturalsource.organelle ?
_em_entity_assembly_naturalsource.organ ?
_em_entity_assembly_naturalsource.strain ?
_em_entity_assembly_naturalsource.tissue ?
#
_em_entity_assembly_recombinant.cell Expi293F
_em_entity_assembly_recombinant.entity_assembly_id 1
_em_entity_assembly_recombinant.id 2
_em_entity_assembly_recombinant.ncbi_tax_id 9606
_em_entity_assembly_recombinant.organism 'Homo sapiens'
_em_entity_assembly_recombinant.plasmid 'pcDNA3.4 TOPO'
_em_entity_assembly_recombinant.strain ?
#
_em_image_processing.details ?
_em_image_processing.id 1
_em_image_processing.image_recording_id 1
#
_em_image_recording.average_exposure_time 6.14
_em_image_recording.avg_electron_dose_per_subtomogram ?
_em_image_recording.avg_electron_dose_per_image 67.72
_em_image_recording.details ?
_em_image_recording.detector_mode ?
_em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)'
_em_image_recording.id 1
_em_image_recording.imaging_id 1
_em_image_recording.num_diffraction_images ?
_em_image_recording.num_grids_imaged 1
_em_image_recording.num_real_images 10377
#
_em_imaging_optics.chr_aberration_corrector ?
_em_imaging_optics.energyfilter_lower ?
_em_imaging_optics.energyfilter_slit_width 20
_em_imaging_optics.energyfilter_name 'GIF Bioquantum'
_em_imaging_optics.energyfilter_upper ?
_em_imaging_optics.id 1
_em_imaging_optics.imaging_id 1
_em_imaging_optics.phase_plate ?
_em_imaging_optics.sph_aberration_corrector ?
_em_imaging_optics.details ?
#
_em_particle_selection.details
;96,330 particles were first picked using a blob picker of cryoSPARC. 2D class average images were generated as templates for subsequent reference-based auto-picking.
;
_em_particle_selection.id 1
_em_particle_selection.image_processing_id 1
_em_particle_selection.method ?
_em_particle_selection.num_particles_selected 8101104
_em_particle_selection.reference_model ?
#
loop_
_em_software.category
_em_software.details
_em_software.id
_em_software.image_processing_id
_em_software.fitting_id
_em_software.imaging_id
_em_software.name
_em_software.version
'PARTICLE SELECTION' 'Cryospatc template based auto-picking was used.' 1 1 ? ? cryoSPARC 3.3.2
'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 2.13
MASKING ? 3 ? ? ? ? ?
'CTF CORRECTION' 'patch CTF estimation was used.' 4 1 ? ? cryoSPARC 3.3.2
'LAYERLINE INDEXING' ? 5 ? ? ? ? ?
'DIFFRACTION INDEXING' ? 6 ? ? ? ? ?
'MODEL FITTING' 'Fit in map tool' 7 ? 1 ? 'UCSF Chimera' 1.16
OTHER ? 8 ? ? ? ? ?
'INITIAL EULER ASSIGNMENT' 'Ab-intio reconstruction' 9 1 ? ? cryoSPARC 3.3.2
'FINAL EULER ASSIGNMENT' 'Non-uniform refinement' 10 1 ? ? cryoSPARC 3.3.2
CLASSIFICATION 'Hetero refinement' 11 1 ? ? cryoSPARC 3.3.2
RECONSTRUCTION 'Local refinement' 12 1 ? ? cryoSPARC 3.3.2
'MODEL REFINEMENT' 'Real-space refinement' 13 ? 1 ? PHENIX 1.19.2
'VOLUME SELECTION' ? 14 1 1 1 ? ?
'SERIES ALIGNMENT' ? 15 1 1 1 ? ?
'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ?
'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ?
'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ?
'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ?
#
_em_specimen.concentration 0.8
_em_specimen.details 'This sample was monodisperse'
_em_specimen.embedding_applied NO
_em_specimen.experiment_id 1
_em_specimen.id 1
_em_specimen.shadowing_applied NO
_em_specimen.staining_applied NO
_em_specimen.vitrification_applied YES
#
_pdbx_audit_support.funding_organization 'Other government'
_pdbx_audit_support.country 'Korea, Republic Of'
_pdbx_audit_support.grant_number IBS-R030-C1
_pdbx_audit_support.ordinal 1
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NAG 1 n
2 NAG 2 n
3 NAG 1 n
3 NAG 2 n
3 BMA 3 n
#
_atom_sites.entry_id 8HSI
_atom_sites.Cartn_transf_matrix[1][1] ?
_atom_sites.Cartn_transf_matrix[1][2] ?
_atom_sites.Cartn_transf_matrix[1][3] ?
_atom_sites.Cartn_transf_matrix[2][1] ?
_atom_sites.Cartn_transf_matrix[2][2] ?
_atom_sites.Cartn_transf_matrix[2][3] ?
_atom_sites.Cartn_transf_matrix[3][1] ?
_atom_sites.Cartn_transf_matrix[3][2] ?
_atom_sites.Cartn_transf_matrix[3][3] ?
_atom_sites.Cartn_transf_vector[1] ?
_atom_sites.Cartn_transf_vector[2] ?
_atom_sites.Cartn_transf_vector[3] ?
_atom_sites.fract_transf_matrix[1][1] 1.000000
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 1.000000
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 1.000000
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
_atom_sites.solution_primary ?
_atom_sites.solution_secondary ?
_atom_sites.solution_hydrogens ?
_atom_sites.special_details ?
#
loop_
_atom_type.symbol
C
H
N
O
P
S
#
loop_