HEADER MEMBRANE PROTEIN 21-DEC-22 8HTT TITLE CRYO-EM STRUCTURE OF HUMAN TMEM87A, GLUCONATE-BOUND CAVEAT 8HTT GCO B 901 HAS WRONG CHIRALITY AT ATOM C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN 87A,EGFP; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE CHIMERA OF TRANSMEMBRANE PROTEIN 87A, LINKERS, COMPND 6 EGFP AND TAGS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, HUMAN ADENOVIRUS 2; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 10515; SOURCE 5 GENE: TMEM87A, PSEC0094; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293F; SOURCE 9 EXPRESSION_SYSTEM_CELL: EXPI293F KEYWDS NON-SELECTIVE CATION CHANNEL, ION CHANNEL, MEMBRANE PROTEIN, GOLGI- KEYWDS 2 LOCALIZED PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.HAN,H.M.KIM REVDAT 3 06-NOV-24 8HTT 1 REMARK REVDAT 2 18-SEP-24 8HTT 1 JRNL REVDAT 1 27-DEC-23 8HTT 0 JRNL AUTH H.KANG,A.R.HAN,A.ZHANG,H.JEONG,W.KOH,J.M.LEE,H.LEE,H.Y.JO, JRNL AUTH 2 M.A.MARIA-SOLANO,M.BHALLA,J.KWON,W.S.ROH,J.YANG,H.J.AN, JRNL AUTH 3 S.CHOI,H.M.KIM,C.J.LEE JRNL TITL GOLPHCAT (TMEM87A), A UNIQUE VOLTAGE-DEPENDENT CATION JRNL TITL 2 CHANNEL IN GOLGI APPARATUS, CONTRIBUTES TO GOLGI-PH JRNL TITL 3 MAINTENANCE AND HIPPOCAMPUS-DEPENDENT MEMORY. JRNL REF NAT COMMUN V. 15 5830 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38992057 JRNL DOI 10.1038/S41467-024-49297-8 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, UCSF REMARK 3 CHIMERA, PHENIX, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 40.000 REMARK 3 REMARK 3 FITTING PROCEDURE : CHIMERA FIT IN MAP TOOL WAS USED FOR INITIAL REMARK 3 LOCAL FITTING. THEN, REAL-SPACE REFINEMENT WITH THE RIGID BODY REMARK 3 OPTION IN PHENIX WAS USED FOR FLEXIBLE FITTING. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 201915 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NON-UNIFORM REFINEMENT AND CTF REFINEMENT WERE USED REMARK 3 TO IMPROVE THE PARTICLE ALIGNMENT AND MAP QUALITY. REMARK 4 REMARK 4 8HTT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1300034292. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TRANSMEMBRANE PROTEIN 87A WITH REMARK 245 GFP TAG AND TWIN-STREP TAG WITH REMARK 245 GLUCONATE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.70 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 9.00 REMARK 245 SAMPLE DETAILS : TRANSMEMBRANE PROTEIN 87A WITH REMARK 245 GFP TAG AND TWIN-STREP TAG WITH GLUCONATE PURIFIED WITH REMARK 245 DETERGENT LMNG/CHS REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 13099 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1900.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6815.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : 58900 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : USING ZEMLIN TABLEAU IN REMARK 245 SHERPA REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ALA B 5 REMARK 465 TRP B 6 REMARK 465 LEU B 7 REMARK 465 GLN B 8 REMARK 465 VAL B 9 REMARK 465 LEU B 10 REMARK 465 PRO B 11 REMARK 465 VAL B 12 REMARK 465 ILE B 13 REMARK 465 LEU B 14 REMARK 465 LEU B 15 REMARK 465 LEU B 16 REMARK 465 LEU B 17 REMARK 465 GLY B 18 REMARK 465 ALA B 19 REMARK 465 HIS B 20 REMARK 465 PRO B 21 REMARK 465 SER B 22 REMARK 465 PRO B 23 REMARK 465 LEU B 24 REMARK 465 SER B 25 REMARK 465 PHE B 26 REMARK 465 PHE B 27 REMARK 465 SER B 28 REMARK 465 ALA B 29 REMARK 465 GLY B 30 REMARK 465 PRO B 31 REMARK 465 ALA B 32 REMARK 465 THR B 33 REMARK 465 VAL B 34 REMARK 465 ALA B 35 REMARK 465 ALA B 36 REMARK 465 ALA B 37 REMARK 465 THR B 136 REMARK 465 PHE B 137 REMARK 465 SER B 138 REMARK 465 GLY B 139 REMARK 465 ASP B 140 REMARK 465 PHE B 141 REMARK 465 MET B 142 REMARK 465 HIS B 143 REMARK 465 ARG B 144 REMARK 465 LEU B 145 REMARK 465 PRO B 146 REMARK 465 LEU B 147 REMARK 465 LEU B 148 REMARK 465 GLY B 149 REMARK 465 GLU B 150 REMARK 465 LYS B 151 REMARK 465 GLN B 152 REMARK 465 GLU B 153 REMARK 465 ALA B 154 REMARK 465 LYS B 155 REMARK 465 GLU B 156 REMARK 465 ASN B 157 REMARK 465 GLY B 158 REMARK 465 THR B 159 REMARK 465 ASN B 160 REMARK 465 LEU B 161 REMARK 465 THR B 162 REMARK 465 PHE B 163 REMARK 465 ILE B 164 REMARK 465 GLY B 165 REMARK 465 ASP B 166 REMARK 465 LYS B 167 REMARK 465 THR B 168 REMARK 465 ALA B 169 REMARK 465 MET B 170 REMARK 465 HIS B 171 REMARK 465 GLU B 172 REMARK 465 SER B 193 REMARK 465 LYS B 194 REMARK 465 GLU B 195 REMARK 465 SER B 196 REMARK 465 SER B 197 REMARK 465 LYS B 198 REMARK 465 GLU B 199 REMARK 465 ASN B 200 REMARK 465 SER B 201 REMARK 465 LEU B 202 REMARK 465 LEU B 474 REMARK 465 SER B 475 REMARK 465 GLU B 476 REMARK 465 GLU B 477 REMARK 465 GLU B 478 REMARK 465 GLU B 479 REMARK 465 GLU B 480 REMARK 465 ASP B 481 REMARK 465 GLU B 482 REMARK 465 GLN B 483 REMARK 465 LYS B 484 REMARK 465 GLU B 485 REMARK 465 PRO B 486 REMARK 465 MET B 487 REMARK 465 LEU B 488 REMARK 465 LYS B 489 REMARK 465 GLU B 490 REMARK 465 SER B 491 REMARK 465 PHE B 492 REMARK 465 GLU B 493 REMARK 465 GLY B 494 REMARK 465 MET B 495 REMARK 465 LYS B 496 REMARK 465 MET B 497 REMARK 465 ARG B 498 REMARK 465 SER B 499 REMARK 465 THR B 500 REMARK 465 LYS B 501 REMARK 465 GLN B 502 REMARK 465 GLU B 503 REMARK 465 PRO B 504 REMARK 465 ASN B 505 REMARK 465 GLY B 506 REMARK 465 ASN B 507 REMARK 465 SER B 508 REMARK 465 LYS B 509 REMARK 465 VAL B 510 REMARK 465 ASN B 511 REMARK 465 LYS B 512 REMARK 465 ALA B 513 REMARK 465 GLN B 514 REMARK 465 GLU B 515 REMARK 465 ASP B 516 REMARK 465 ASP B 517 REMARK 465 LEU B 518 REMARK 465 LYS B 519 REMARK 465 TRP B 520 REMARK 465 VAL B 521 REMARK 465 GLU B 522 REMARK 465 GLU B 523 REMARK 465 ASN B 524 REMARK 465 VAL B 525 REMARK 465 PRO B 526 REMARK 465 SER B 527 REMARK 465 SER B 528 REMARK 465 VAL B 529 REMARK 465 THR B 530 REMARK 465 ASP B 531 REMARK 465 VAL B 532 REMARK 465 ALA B 533 REMARK 465 LEU B 534 REMARK 465 PRO B 535 REMARK 465 ALA B 536 REMARK 465 LEU B 537 REMARK 465 LEU B 538 REMARK 465 ASP B 539 REMARK 465 SER B 540 REMARK 465 ASP B 541 REMARK 465 GLU B 542 REMARK 465 GLU B 543 REMARK 465 ARG B 544 REMARK 465 MET B 545 REMARK 465 ILE B 546 REMARK 465 THR B 547 REMARK 465 HIS B 548 REMARK 465 PHE B 549 REMARK 465 GLU B 550 REMARK 465 ARG B 551 REMARK 465 SER B 552 REMARK 465 LYS B 553 REMARK 465 MET B 554 REMARK 465 GLU B 555 REMARK 465 LEU B 556 REMARK 465 LYS B 557 REMARK 465 GLU B 558 REMARK 465 ASN B 559 REMARK 465 LEU B 560 REMARK 465 TYR B 561 REMARK 465 PHE B 562 REMARK 465 GLN B 563 REMARK 465 GLY B 564 REMARK 465 GLY B 565 REMARK 465 THR B 566 REMARK 465 LEU B 567 REMARK 465 GLU B 568 REMARK 465 VAL B 569 REMARK 465 LEU B 570 REMARK 465 PHE B 571 REMARK 465 GLN B 572 REMARK 465 GLY B 573 REMARK 465 PRO B 574 REMARK 465 ASN B 575 REMARK 465 PRO B 576 REMARK 465 ALA B 577 REMARK 465 PHE B 578 REMARK 465 LEU B 579 REMARK 465 TYR B 580 REMARK 465 LYS B 581 REMARK 465 VAL B 582 REMARK 465 VAL B 583 REMARK 465 ASP B 584 REMARK 465 PRO B 585 REMARK 465 VAL B 586 REMARK 465 VAL B 587 REMARK 465 SER B 588 REMARK 465 LYS B 589 REMARK 465 GLY B 590 REMARK 465 GLU B 591 REMARK 465 GLU B 592 REMARK 465 LEU B 593 REMARK 465 PHE B 594 REMARK 465 THR B 595 REMARK 465 GLY B 596 REMARK 465 VAL B 597 REMARK 465 VAL B 598 REMARK 465 PRO B 599 REMARK 465 ILE B 600 REMARK 465 LEU B 601 REMARK 465 VAL B 602 REMARK 465 GLU B 603 REMARK 465 LEU B 604 REMARK 465 ASP B 605 REMARK 465 GLY B 606 REMARK 465 ASP B 607 REMARK 465 VAL B 608 REMARK 465 ASN B 609 REMARK 465 GLY B 610 REMARK 465 HIS B 611 REMARK 465 LYS B 612 REMARK 465 PHE B 613 REMARK 465 SER B 614 REMARK 465 VAL B 615 REMARK 465 SER B 616 REMARK 465 GLY B 617 REMARK 465 GLU B 618 REMARK 465 GLY B 619 REMARK 465 GLU B 620 REMARK 465 GLY B 621 REMARK 465 ASP B 622 REMARK 465 ALA B 623 REMARK 465 THR B 624 REMARK 465 TYR B 625 REMARK 465 GLY B 626 REMARK 465 LYS B 627 REMARK 465 LEU B 628 REMARK 465 THR B 629 REMARK 465 LEU B 630 REMARK 465 LYS B 631 REMARK 465 PHE B 632 REMARK 465 ILE B 633 REMARK 465 CYS B 634 REMARK 465 THR B 635 REMARK 465 THR B 636 REMARK 465 GLY B 637 REMARK 465 LYS B 638 REMARK 465 LEU B 639 REMARK 465 PRO B 640 REMARK 465 VAL B 641 REMARK 465 PRO B 642 REMARK 465 TRP B 643 REMARK 465 PRO B 644 REMARK 465 THR B 645 REMARK 465 LEU B 646 REMARK 465 VAL B 647 REMARK 465 THR B 648 REMARK 465 THR B 649 REMARK 465 LEU B 650 REMARK 465 THR B 651 REMARK 465 TYR B 652 REMARK 465 GLY B 653 REMARK 465 VAL B 654 REMARK 465 GLN B 655 REMARK 465 CYS B 656 REMARK 465 PHE B 657 REMARK 465 SER B 658 REMARK 465 ARG B 659 REMARK 465 TYR B 660 REMARK 465 PRO B 661 REMARK 465 ASP B 662 REMARK 465 HIS B 663 REMARK 465 MET B 664 REMARK 465 LYS B 665 REMARK 465 GLN B 666 REMARK 465 HIS B 667 REMARK 465 ASP B 668 REMARK 465 PHE B 669 REMARK 465 PHE B 670 REMARK 465 LYS B 671 REMARK 465 SER B 672 REMARK 465 ALA B 673 REMARK 465 MET B 674 REMARK 465 PRO B 675 REMARK 465 GLU B 676 REMARK 465 GLY B 677 REMARK 465 TYR B 678 REMARK 465 VAL B 679 REMARK 465 GLN B 680 REMARK 465 GLU B 681 REMARK 465 ARG B 682 REMARK 465 THR B 683 REMARK 465 ILE B 684 REMARK 465 PHE B 685 REMARK 465 PHE B 686 REMARK 465 LYS B 687 REMARK 465 ASP B 688 REMARK 465 ASP B 689 REMARK 465 GLY B 690 REMARK 465 ASN B 691 REMARK 465 TYR B 692 REMARK 465 LYS B 693 REMARK 465 THR B 694 REMARK 465 ARG B 695 REMARK 465 ALA B 696 REMARK 465 GLU B 697 REMARK 465 VAL B 698 REMARK 465 LYS B 699 REMARK 465 PHE B 700 REMARK 465 GLU B 701 REMARK 465 GLY B 702 REMARK 465 ASP B 703 REMARK 465 THR B 704 REMARK 465 LEU B 705 REMARK 465 VAL B 706 REMARK 465 ASN B 707 REMARK 465 ARG B 708 REMARK 465 ILE B 709 REMARK 465 GLU B 710 REMARK 465 LEU B 711 REMARK 465 LYS B 712 REMARK 465 GLY B 713 REMARK 465 ILE B 714 REMARK 465 ASP B 715 REMARK 465 PHE B 716 REMARK 465 LYS B 717 REMARK 465 GLU B 718 REMARK 465 ASP B 719 REMARK 465 GLY B 720 REMARK 465 ASN B 721 REMARK 465 ILE B 722 REMARK 465 LEU B 723 REMARK 465 GLY B 724 REMARK 465 HIS B 725 REMARK 465 LYS B 726 REMARK 465 LEU B 727 REMARK 465 GLU B 728 REMARK 465 TYR B 729 REMARK 465 ASN B 730 REMARK 465 TYR B 731 REMARK 465 ASN B 732 REMARK 465 SER B 733 REMARK 465 HIS B 734 REMARK 465 ASN B 735 REMARK 465 VAL B 736 REMARK 465 TYR B 737 REMARK 465 ILE B 738 REMARK 465 MET B 739 REMARK 465 ALA B 740 REMARK 465 ASP B 741 REMARK 465 LYS B 742 REMARK 465 GLN B 743 REMARK 465 LYS B 744 REMARK 465 ASN B 745 REMARK 465 GLY B 746 REMARK 465 ILE B 747 REMARK 465 LYS B 748 REMARK 465 VAL B 749 REMARK 465 ASN B 750 REMARK 465 PHE B 751 REMARK 465 LYS B 752 REMARK 465 ILE B 753 REMARK 465 ARG B 754 REMARK 465 HIS B 755 REMARK 465 ASN B 756 REMARK 465 ILE B 757 REMARK 465 GLU B 758 REMARK 465 ASP B 759 REMARK 465 GLY B 760 REMARK 465 SER B 761 REMARK 465 VAL B 762 REMARK 465 GLN B 763 REMARK 465 LEU B 764 REMARK 465 ALA B 765 REMARK 465 ASP B 766 REMARK 465 HIS B 767 REMARK 465 TYR B 768 REMARK 465 GLN B 769 REMARK 465 GLN B 770 REMARK 465 ASN B 771 REMARK 465 THR B 772 REMARK 465 PRO B 773 REMARK 465 ILE B 774 REMARK 465 GLY B 775 REMARK 465 ASP B 776 REMARK 465 GLY B 777 REMARK 465 PRO B 778 REMARK 465 VAL B 779 REMARK 465 LEU B 780 REMARK 465 LEU B 781 REMARK 465 PRO B 782 REMARK 465 ASP B 783 REMARK 465 ASN B 784 REMARK 465 HIS B 785 REMARK 465 TYR B 786 REMARK 465 LEU B 787 REMARK 465 SER B 788 REMARK 465 THR B 789 REMARK 465 GLN B 790 REMARK 465 SER B 791 REMARK 465 ALA B 792 REMARK 465 LEU B 793 REMARK 465 SER B 794 REMARK 465 LYS B 795 REMARK 465 ASP B 796 REMARK 465 PRO B 797 REMARK 465 ASN B 798 REMARK 465 GLU B 799 REMARK 465 LYS B 800 REMARK 465 ARG B 801 REMARK 465 ASP B 802 REMARK 465 HIS B 803 REMARK 465 MET B 804 REMARK 465 VAL B 805 REMARK 465 LEU B 806 REMARK 465 LEU B 807 REMARK 465 GLU B 808 REMARK 465 PHE B 809 REMARK 465 VAL B 810 REMARK 465 THR B 811 REMARK 465 ALA B 812 REMARK 465 ALA B 813 REMARK 465 GLY B 814 REMARK 465 ILE B 815 REMARK 465 THR B 816 REMARK 465 LEU B 817 REMARK 465 GLY B 818 REMARK 465 MET B 819 REMARK 465 ASP B 820 REMARK 465 GLU B 821 REMARK 465 LEU B 822 REMARK 465 TYR B 823 REMARK 465 LYS B 824 REMARK 465 GLU B 825 REMARK 465 PHE B 826 REMARK 465 LEU B 827 REMARK 465 VAL B 828 REMARK 465 PRO B 829 REMARK 465 ARG B 830 REMARK 465 GLY B 831 REMARK 465 SER B 832 REMARK 465 SER B 833 REMARK 465 ARG B 834 REMARK 465 SER B 835 REMARK 465 ALA B 836 REMARK 465 TRP B 837 REMARK 465 SER B 838 REMARK 465 HIS B 839 REMARK 465 PRO B 840 REMARK 465 GLN B 841 REMARK 465 PHE B 842 REMARK 465 GLU B 843 REMARK 465 LYS B 844 REMARK 465 GLY B 845 REMARK 465 GLY B 846 REMARK 465 GLY B 847 REMARK 465 SER B 848 REMARK 465 GLY B 849 REMARK 465 GLY B 850 REMARK 465 GLY B 851 REMARK 465 SER B 852 REMARK 465 GLY B 853 REMARK 465 GLY B 854 REMARK 465 SER B 855 REMARK 465 ALA B 856 REMARK 465 TRP B 857 REMARK 465 SER B 858 REMARK 465 HIS B 859 REMARK 465 PRO B 860 REMARK 465 GLN B 861 REMARK 465 PHE B 862 REMARK 465 GLU B 863 REMARK 465 LYS B 864 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 51 -6.34 75.77 REMARK 500 PHE B 60 -179.25 -69.75 REMARK 500 LYS B 111 -1.00 77.87 REMARK 500 CYS B 128 -44.80 -134.56 REMARK 500 GLU B 222 -1.84 78.92 REMARK 500 VAL B 322 -61.71 -105.10 REMARK 500 THR B 357 30.99 -95.10 REMARK 500 ASP B 358 -1.95 77.40 REMARK 500 ARG B 393 61.46 61.31 REMARK 500 GLU B 437 56.55 -100.76 REMARK 500 ASN B 465 53.28 -91.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8HSI RELATED DB: PDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN TMEM87A, PE-BOUND REMARK 900 RELATED ID: EMD-35017 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF HUMAN TMEM87A, GLUCONATE-BOUND DBREF 8HTT B 1 555 UNP Q8NBN3 TM87A_HUMAN 1 555 DBREF1 8HTT B 587 824 UNP A0A6M5E0N3_ADE02 DBREF2 8HTT B A0A6M5E0N3 2 239 SEQADV 8HTT LEU B 556 UNP Q8NBN3 LINKER SEQADV 8HTT LYS B 557 UNP Q8NBN3 LINKER SEQADV 8HTT GLU B 558 UNP Q8NBN3 LINKER SEQADV 8HTT ASN B 559 UNP Q8NBN3 LINKER SEQADV 8HTT LEU B 560 UNP Q8NBN3 LINKER SEQADV 8HTT TYR B 561 UNP Q8NBN3 LINKER SEQADV 8HTT PHE B 562 UNP Q8NBN3 LINKER SEQADV 8HTT GLN B 563 UNP Q8NBN3 LINKER SEQADV 8HTT GLY B 564 UNP Q8NBN3 LINKER SEQADV 8HTT GLY B 565 UNP Q8NBN3 LINKER SEQADV 8HTT THR B 566 UNP Q8NBN3 LINKER SEQADV 8HTT LEU B 567 UNP Q8NBN3 LINKER SEQADV 8HTT GLU B 568 UNP Q8NBN3 LINKER SEQADV 8HTT VAL B 569 UNP Q8NBN3 LINKER SEQADV 8HTT LEU B 570 UNP Q8NBN3 LINKER SEQADV 8HTT PHE B 571 UNP Q8NBN3 LINKER SEQADV 8HTT GLN B 572 UNP Q8NBN3 LINKER SEQADV 8HTT GLY B 573 UNP Q8NBN3 LINKER SEQADV 8HTT PRO B 574 UNP Q8NBN3 LINKER SEQADV 8HTT ASN B 575 UNP Q8NBN3 LINKER SEQADV 8HTT PRO B 576 UNP Q8NBN3 LINKER SEQADV 8HTT ALA B 577 UNP Q8NBN3 LINKER SEQADV 8HTT PHE B 578 UNP Q8NBN3 LINKER SEQADV 8HTT LEU B 579 UNP Q8NBN3 LINKER SEQADV 8HTT TYR B 580 UNP Q8NBN3 LINKER SEQADV 8HTT LYS B 581 UNP Q8NBN3 LINKER SEQADV 8HTT VAL B 582 UNP Q8NBN3 LINKER SEQADV 8HTT VAL B 583 UNP Q8NBN3 LINKER SEQADV 8HTT ASP B 584 UNP Q8NBN3 LINKER SEQADV 8HTT PRO B 585 UNP Q8NBN3 LINKER SEQADV 8HTT VAL B 586 UNP Q8NBN3 LINKER SEQADV 8HTT GLN B 770 UNP A0A6M5E0N HIS 185 CONFLICT SEQADV 8HTT GLU B 825 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PHE B 826 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT LEU B 827 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT VAL B 828 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PRO B 829 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT ARG B 830 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 831 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 832 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 833 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT ARG B 834 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 835 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT ALA B 836 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT TRP B 837 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 838 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT HIS B 839 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PRO B 840 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLN B 841 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PHE B 842 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLU B 843 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT LYS B 844 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 845 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 846 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 847 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 848 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 849 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 850 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 851 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 852 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 853 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLY B 854 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 855 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT ALA B 856 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT TRP B 857 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT SER B 858 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT HIS B 859 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PRO B 860 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLN B 861 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT PHE B 862 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT GLU B 863 UNP A0A6M5E0N EXPRESSION TAG SEQADV 8HTT LYS B 864 UNP A0A6M5E0N EXPRESSION TAG SEQRES 1 B 864 MET ALA ALA ALA ALA TRP LEU GLN VAL LEU PRO VAL ILE SEQRES 2 B 864 LEU LEU LEU LEU GLY ALA HIS PRO SER PRO LEU SER PHE SEQRES 3 B 864 PHE SER ALA GLY PRO ALA THR VAL ALA ALA ALA ASP ARG SEQRES 4 B 864 SER LYS TRP HIS ILE PRO ILE PRO SER GLY LYS ASN TYR SEQRES 5 B 864 PHE SER PHE GLY LYS ILE LEU PHE ARG ASN THR THR ILE SEQRES 6 B 864 PHE LEU LYS PHE ASP GLY GLU PRO CYS ASP LEU SER LEU SEQRES 7 B 864 ASN ILE THR TRP TYR LEU LYS SER ALA ASP CYS TYR ASN SEQRES 8 B 864 GLU ILE TYR ASN PHE LYS ALA GLU GLU VAL GLU LEU TYR SEQRES 9 B 864 LEU GLU LYS LEU LYS GLU LYS ARG GLY LEU SER GLY LYS SEQRES 10 B 864 TYR GLN THR SER SER LYS LEU PHE GLN ASN CYS SER GLU SEQRES 11 B 864 LEU PHE LYS THR GLN THR PHE SER GLY ASP PHE MET HIS SEQRES 12 B 864 ARG LEU PRO LEU LEU GLY GLU LYS GLN GLU ALA LYS GLU SEQRES 13 B 864 ASN GLY THR ASN LEU THR PHE ILE GLY ASP LYS THR ALA SEQRES 14 B 864 MET HIS GLU PRO LEU GLN THR TRP GLN ASP ALA PRO TYR SEQRES 15 B 864 ILE PHE ILE VAL HIS ILE GLY ILE SER SER SER LYS GLU SEQRES 16 B 864 SER SER LYS GLU ASN SER LEU SER ASN LEU PHE THR MET SEQRES 17 B 864 THR VAL GLU VAL LYS GLY PRO TYR GLU TYR LEU THR LEU SEQRES 18 B 864 GLU ASP TYR PRO LEU MET ILE PHE PHE MET VAL MET CYS SEQRES 19 B 864 ILE VAL TYR VAL LEU PHE GLY VAL LEU TRP LEU ALA TRP SEQRES 20 B 864 SER ALA CYS TYR TRP ARG ASP LEU LEU ARG ILE GLN PHE SEQRES 21 B 864 TRP ILE GLY ALA VAL ILE PHE LEU GLY MET LEU GLU LYS SEQRES 22 B 864 ALA VAL PHE TYR ALA GLU PHE GLN ASN ILE ARG TYR LYS SEQRES 23 B 864 GLY GLU SER VAL GLN GLY ALA LEU ILE LEU ALA GLU LEU SEQRES 24 B 864 LEU SER ALA VAL LYS ARG SER LEU ALA ARG THR LEU VAL SEQRES 25 B 864 ILE ILE VAL SER LEU GLY TYR GLY ILE VAL LYS PRO ARG SEQRES 26 B 864 LEU GLY VAL THR LEU HIS LYS VAL VAL VAL ALA GLY ALA SEQRES 27 B 864 LEU TYR LEU LEU PHE SER GLY MET GLU GLY VAL LEU ARG SEQRES 28 B 864 VAL THR GLY ALA GLN THR ASP LEU ALA SER LEU ALA PHE SEQRES 29 B 864 ILE PRO LEU ALA PHE LEU ASP THR ALA LEU CYS TRP TRP SEQRES 30 B 864 ILE PHE ILE SER LEU THR GLN THR MET LYS LEU LEU LYS SEQRES 31 B 864 LEU ARG ARG ASN ILE VAL LYS LEU SER LEU TYR ARG HIS SEQRES 32 B 864 PHE THR ASN THR LEU ILE LEU ALA VAL ALA ALA SER ILE SEQRES 33 B 864 VAL PHE ILE ILE TRP THR THR MET LYS PHE ARG ILE VAL SEQRES 34 B 864 THR CYS GLN SER ASP TRP ARG GLU LEU TRP VAL ASP ASP SEQRES 35 B 864 ALA ILE TRP ARG LEU LEU PHE SER MET ILE LEU PHE VAL SEQRES 36 B 864 ILE MET VAL LEU TRP ARG PRO SER ALA ASN ASN GLN ARG SEQRES 37 B 864 PHE ALA PHE SER PRO LEU SER GLU GLU GLU GLU GLU ASP SEQRES 38 B 864 GLU GLN LYS GLU PRO MET LEU LYS GLU SER PHE GLU GLY SEQRES 39 B 864 MET LYS MET ARG SER THR LYS GLN GLU PRO ASN GLY ASN SEQRES 40 B 864 SER LYS VAL ASN LYS ALA GLN GLU ASP ASP LEU LYS TRP SEQRES 41 B 864 VAL GLU GLU ASN VAL PRO SER SER VAL THR ASP VAL ALA SEQRES 42 B 864 LEU PRO ALA LEU LEU ASP SER ASP GLU GLU ARG MET ILE SEQRES 43 B 864 THR HIS PHE GLU ARG SER LYS MET GLU LEU LYS GLU ASN SEQRES 44 B 864 LEU TYR PHE GLN GLY GLY THR LEU GLU VAL LEU PHE GLN SEQRES 45 B 864 GLY PRO ASN PRO ALA PHE LEU TYR LYS VAL VAL ASP PRO SEQRES 46 B 864 VAL VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL SEQRES 47 B 864 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 48 B 864 LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SEQRES 49 B 864 TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY SEQRES 50 B 864 LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 51 B 864 THR TYR GLY VAL GLN CYS PHE SER ARG TYR PRO ASP HIS SEQRES 52 B 864 MET LYS GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU SEQRES 53 B 864 GLY TYR VAL GLN GLU ARG THR ILE PHE PHE LYS ASP ASP SEQRES 54 B 864 GLY ASN TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY SEQRES 55 B 864 ASP THR LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP SEQRES 56 B 864 PHE LYS GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU SEQRES 57 B 864 TYR ASN TYR ASN SER HIS ASN VAL TYR ILE MET ALA ASP SEQRES 58 B 864 LYS GLN LYS ASN GLY ILE LYS VAL ASN PHE LYS ILE ARG SEQRES 59 B 864 HIS ASN ILE GLU ASP GLY SER VAL GLN LEU ALA ASP HIS SEQRES 60 B 864 TYR GLN GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU SEQRES 61 B 864 LEU PRO ASP ASN HIS TYR LEU SER THR GLN SER ALA LEU SEQRES 62 B 864 SER LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU SEQRES 63 B 864 LEU GLU PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET SEQRES 64 B 864 ASP GLU LEU TYR LYS GLU PHE LEU VAL PRO ARG GLY SER SEQRES 65 B 864 SER ARG SER ALA TRP SER HIS PRO GLN PHE GLU LYS GLY SEQRES 66 B 864 GLY GLY SER GLY GLY GLY SER GLY GLY SER ALA TRP SER SEQRES 67 B 864 HIS PRO GLN PHE GLU LYS HET NAG A 1 14 HET NAG A 2 14 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET GCO B 901 24 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM GCO D-GLUCONIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GCO GLUCONIC ACID FORMUL 2 NAG 6(C8 H15 N O6) FORMUL 4 BMA C6 H12 O6 FORMUL 5 GCO C6 H12 O7 HELIX 1 AA1 TYR B 90 ASN B 95 1 6 HELIX 2 AA2 LYS B 97 GLU B 99 5 3 HELIX 3 AA3 GLU B 100 GLU B 110 1 11 HELIX 4 AA4 ASP B 223 TYR B 251 1 29 HELIX 5 AA5 LEU B 256 GLY B 287 1 32 HELIX 6 AA6 GLY B 292 GLY B 318 1 27 HELIX 7 AA7 VAL B 335 GLY B 337 5 3 HELIX 8 AA8 ALA B 338 MET B 346 1 9 HELIX 9 AA9 GLU B 347 THR B 353 1 7 HELIX 10 AB1 ALA B 363 ARG B 393 1 31 HELIX 11 AB2 ILE B 395 ARG B 427 1 33 HELIX 12 AB3 TRP B 435 ASP B 442 5 8 HELIX 13 AB4 ALA B 443 TRP B 460 1 18 SHEET 1 AA1 3 LYS B 41 ILE B 44 0 SHEET 2 AA1 3 PHE B 206 LYS B 213 -1 O MET B 208 N ILE B 44 SHEET 3 AA1 3 THR B 64 GLY B 71 -1 N THR B 64 O LYS B 213 SHEET 1 AA2 4 PHE B 53 LEU B 59 0 SHEET 2 AA2 4 ALA B 180 SER B 191 -1 O PHE B 184 N PHE B 55 SHEET 3 AA2 4 SER B 77 SER B 86 -1 N LYS B 85 O ILE B 183 SHEET 4 AA2 4 TYR B 118 PHE B 125 -1 O PHE B 125 N LEU B 78 SSBOND 1 CYS B 74 CYS B 128 1555 1555 2.03 SSBOND 2 CYS B 89 CYS B 431 1555 1555 2.03 LINK ND2 ASN B 62 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN B 79 C1 NAG A 1 1555 1555 1.44 LINK ND2 ASN B 127 C1 NAG D 1 1555 1555 1.43 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000