data_8HYG # _entry.id 8HYG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8HYG pdb_00008hyg 10.2210/pdb8hyg/pdb WWPDB D_1300034507 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8HYG _pdbx_database_status.recvd_initial_deposition_date 2023-01-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tsao, H.E.' 1 0000-0002-7975-2568 'Lui, S.N.' 2 0000-0003-0401-9684 'Wong, K.B.' 3 0000-0002-6984-5373 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 at pH 4.6' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tsao, H.E.' 1 0000-0002-7975-2568 primary 'Lui, S.N.' 2 0000-0003-0401-9684 primary 'Wong, K.B.' 3 0000-0002-6984-5373 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 103.360 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8HYG _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.987 _cell.length_a_esd ? _cell.length_b 60.318 _cell.length_b_esd ? _cell.length_c 38.466 _cell.length_c_esd ? _cell.volume 74464.914 _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8HYG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vacuolar-sorting receptor 1' 17831.242 1 ? ? 'Protease associated domain' ? 2 non-polymer syn 'ACETATE ION' 59.044 4 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 5 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 6 water nat water 18.015 70 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AtVSR1,BP80-like protein b,AtBP80b,Epidermal growth factor receptor-like protein 1,AtELP,AtELP1,Spot 3 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGD CYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTE SVPHP ; _entity_poly.pdbx_seq_one_letter_code_can ;GSRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGD CYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTE SVPHP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 PHE n 1 5 VAL n 1 6 VAL n 1 7 GLU n 1 8 LYS n 1 9 ASN n 1 10 ASN n 1 11 LEU n 1 12 LYS n 1 13 VAL n 1 14 THR n 1 15 SER n 1 16 PRO n 1 17 ASP n 1 18 SER n 1 19 ILE n 1 20 LYS n 1 21 GLY n 1 22 ILE n 1 23 TYR n 1 24 GLU n 1 25 CYS n 1 26 ALA n 1 27 ILE n 1 28 GLY n 1 29 ASN n 1 30 PHE n 1 31 GLY n 1 32 VAL n 1 33 PRO n 1 34 GLN n 1 35 TYR n 1 36 GLY n 1 37 GLY n 1 38 THR n 1 39 LEU n 1 40 VAL n 1 41 GLY n 1 42 THR n 1 43 VAL n 1 44 VAL n 1 45 TYR n 1 46 PRO n 1 47 LYS n 1 48 SER n 1 49 ASN n 1 50 GLN n 1 51 LYS n 1 52 ALA n 1 53 CYS n 1 54 LYS n 1 55 SER n 1 56 TYR n 1 57 SER n 1 58 ASP n 1 59 PHE n 1 60 ASP n 1 61 ILE n 1 62 SER n 1 63 PHE n 1 64 LYS n 1 65 SER n 1 66 LYS n 1 67 PRO n 1 68 GLY n 1 69 ARG n 1 70 LEU n 1 71 PRO n 1 72 THR n 1 73 PHE n 1 74 VAL n 1 75 LEU n 1 76 ILE n 1 77 ASP n 1 78 ARG n 1 79 GLY n 1 80 ASP n 1 81 CYS n 1 82 TYR n 1 83 PHE n 1 84 THR n 1 85 LEU n 1 86 LYS n 1 87 ALA n 1 88 TRP n 1 89 ILE n 1 90 ALA n 1 91 GLN n 1 92 GLN n 1 93 ALA n 1 94 GLY n 1 95 ALA n 1 96 ALA n 1 97 ALA n 1 98 ILE n 1 99 LEU n 1 100 VAL n 1 101 ALA n 1 102 ASP n 1 103 SER n 1 104 LYS n 1 105 ALA n 1 106 GLU n 1 107 PRO n 1 108 LEU n 1 109 ILE n 1 110 THR n 1 111 MET n 1 112 ASP n 1 113 THR n 1 114 PRO n 1 115 GLU n 1 116 GLU n 1 117 ASP n 1 118 LYS n 1 119 SER n 1 120 ASP n 1 121 ALA n 1 122 ASP n 1 123 TYR n 1 124 LEU n 1 125 GLN n 1 126 ASN n 1 127 ILE n 1 128 THR n 1 129 ILE n 1 130 PRO n 1 131 SER n 1 132 ALA n 1 133 LEU n 1 134 ILE n 1 135 THR n 1 136 LYS n 1 137 THR n 1 138 LEU n 1 139 GLY n 1 140 ASP n 1 141 SER n 1 142 ILE n 1 143 LYS n 1 144 SER n 1 145 ALA n 1 146 LEU n 1 147 SER n 1 148 GLY n 1 149 GLY n 1 150 ASP n 1 151 MET n 1 152 VAL n 1 153 ASN n 1 154 MET n 1 155 LYS n 1 156 LEU n 1 157 ASP n 1 158 TRP n 1 159 THR n 1 160 GLU n 1 161 SER n 1 162 VAL n 1 163 PRO n 1 164 HIS n 1 165 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 165 _entity_src_gen.gene_src_common_name 'thale cress' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VSR1, BP80B, ELP, ELP1, At3g52850, F8J2.20' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Arabidopsis thaliana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3702 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VSR1_ARATH _struct_ref.pdbx_db_accession P93026 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCY FTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTESV PHP ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8HYG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 165 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P93026 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 182 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8HYG GLY A 1 ? UNP P93026 ? ? 'expression tag' 18 1 1 8HYG SER A 2 ? UNP P93026 ? ? 'expression tag' 19 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8HYG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M Ammonium acetate, 0.1 M Sodium acetate trihydrate pH 4.6, 30% w/v Polyethylene glycol 4,000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 289 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300-HS' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-09-05 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.999840 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE TPS 05A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.999840 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'TPS 05A' _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate 24.70 _reflns.entry_id 8HYG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 37.42 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19332 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.997 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.6 _reflns_shell.d_res_low 1.63 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 954 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.933 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 37.26 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8HYG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.60 _refine.ls_d_res_low 31.80 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19297 _refine.ls_number_reflns_R_free 941 _refine.ls_number_reflns_R_work 18356 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.43 _refine.ls_percent_reflns_R_free 4.88 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1719 _refine.ls_R_factor_R_free 0.2240 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1692 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4TJV _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.4394 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1838 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 31.80 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 1191 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1062 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0048 ? 1167 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6950 ? 1580 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0527 ? 189 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0044 ? 197 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.7096 ? 424 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.60 1.68 . . 131 2598 99.67 . . . . 0.2358 . . . . . . . . . . . 0.3040 'X-RAY DIFFRACTION' 1.68 1.79 . . 136 2632 99.71 . . . . 0.1910 . . . . . . . . . . . 0.2718 'X-RAY DIFFRACTION' 1.79 1.93 . . 121 2641 99.89 . . . . 0.1670 . . . . . . . . . . . 0.2349 'X-RAY DIFFRACTION' 1.93 2.12 . . 142 2610 99.85 . . . . 0.1581 . . . . . . . . . . . 0.2006 'X-RAY DIFFRACTION' 2.12 2.43 . . 153 2621 99.96 . . . . 0.1729 . . . . . . . . . . . 0.2644 'X-RAY DIFFRACTION' 2.43 3.06 . . 139 2630 99.96 . . . . 0.1828 . . . . . . . . . . . 0.2373 'X-RAY DIFFRACTION' 3.06 31.80 . . 119 2624 97.03 . . . . 0.1577 . . . . . . . . . . . 0.1955 # _struct.entry_id 8HYG _struct.title 'Crystal structure of protease-associated domain of Arabidopsis vacuolar sorting receptor 1 at pH 4.6' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8HYG _struct_keywords.text 'VSR, Vacuolar Sorting, Protease-associated domain, PROTEIN TRANSPORT' _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 3 ? M N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 16 ? LYS A 20 ? PRO A 33 LYS A 37 5 ? 5 HELX_P HELX_P2 AA2 SER A 55 ? ASP A 60 ? SER A 72 ASP A 77 5 ? 6 HELX_P HELX_P3 AA3 TYR A 82 ? ALA A 93 ? TYR A 99 ALA A 110 1 ? 12 HELX_P HELX_P4 AA4 PRO A 107 ? ASP A 112 ? PRO A 124 ASP A 129 1 ? 6 HELX_P HELX_P5 AA5 TYR A 123 ? ILE A 127 ? TYR A 140 ILE A 144 5 ? 5 HELX_P HELX_P6 AA6 THR A 135 ? GLY A 148 ? THR A 152 GLY A 165 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 53 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 81 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 98 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.050 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 15 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 32 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 16 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 33 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.85 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 4 ? SER A 15 ? PHE A 21 SER A 32 AA1 2 GLY A 21 ? GLY A 28 ? GLY A 38 GLY A 45 AA1 3 SER A 131 ? ILE A 134 ? SER A 148 ILE A 151 AA1 4 ALA A 97 ? ALA A 101 ? ALA A 114 ALA A 118 AA1 5 THR A 72 ? ASP A 77 ? THR A 89 ASP A 94 AA1 6 LEU A 39 ? VAL A 44 ? LEU A 56 VAL A 61 AA1 7 ASN A 153 ? LEU A 156 ? ASN A 170 LEU A 173 AA1 8 PHE A 4 ? SER A 15 ? PHE A 21 SER A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 7 ? N GLU A 24 O CYS A 25 ? O CYS A 42 AA1 2 3 N GLY A 28 ? N GLY A 45 O SER A 131 ? O SER A 148 AA1 3 4 O ALA A 132 ? O ALA A 149 N VAL A 100 ? N VAL A 117 AA1 4 5 O LEU A 99 ? O LEU A 116 N ILE A 76 ? N ILE A 93 AA1 5 6 O PHE A 73 ? O PHE A 90 N THR A 42 ? N THR A 59 AA1 6 7 N LEU A 39 ? N LEU A 56 O LEU A 156 ? O LEU A 173 AA1 7 8 O LYS A 155 ? O LYS A 172 N LYS A 12 ? N LYS A 29 # _atom_sites.entry_id 8HYG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.030315 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007200 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.026720 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 18 18 GLY GLY A . n A 1 2 SER 2 19 19 SER SER A . n A 1 3 ARG 3 20 20 ARG ARG A . n A 1 4 PHE 4 21 21 PHE PHE A . n A 1 5 VAL 5 22 22 VAL VAL A . n A 1 6 VAL 6 23 23 VAL VAL A . n A 1 7 GLU 7 24 24 GLU GLU A . n A 1 8 LYS 8 25 25 LYS LYS A . n A 1 9 ASN 9 26 26 ASN ASN A . n A 1 10 ASN 10 27 27 ASN ASN A . n A 1 11 LEU 11 28 28 LEU LEU A . n A 1 12 LYS 12 29 29 LYS LYS A . n A 1 13 VAL 13 30 30 VAL VAL A . n A 1 14 THR 14 31 31 THR THR A . n A 1 15 SER 15 32 32 SER SER A . n A 1 16 PRO 16 33 33 PRO PRO A . n A 1 17 ASP 17 34 34 ASP ASP A . n A 1 18 SER 18 35 35 SER SER A . n A 1 19 ILE 19 36 36 ILE ILE A . n A 1 20 LYS 20 37 37 LYS LYS A . n A 1 21 GLY 21 38 38 GLY GLY A . n A 1 22 ILE 22 39 39 ILE ILE A . n A 1 23 TYR 23 40 40 TYR TYR A . n A 1 24 GLU 24 41 41 GLU GLU A . n A 1 25 CYS 25 42 42 CYS CYS A . n A 1 26 ALA 26 43 43 ALA ALA A . n A 1 27 ILE 27 44 44 ILE ILE A . n A 1 28 GLY 28 45 45 GLY GLY A . n A 1 29 ASN 29 46 46 ASN ASN A . n A 1 30 PHE 30 47 47 PHE PHE A . n A 1 31 GLY 31 48 48 GLY GLY A . n A 1 32 VAL 32 49 ? ? ? A . n A 1 33 PRO 33 50 ? ? ? A . n A 1 34 GLN 34 51 ? ? ? A . n A 1 35 TYR 35 52 ? ? ? A . n A 1 36 GLY 36 53 ? ? ? A . n A 1 37 GLY 37 54 54 GLY GLY A . n A 1 38 THR 38 55 55 THR THR A . n A 1 39 LEU 39 56 56 LEU LEU A . n A 1 40 VAL 40 57 57 VAL VAL A . n A 1 41 GLY 41 58 58 GLY GLY A . n A 1 42 THR 42 59 59 THR THR A . n A 1 43 VAL 43 60 60 VAL VAL A . n A 1 44 VAL 44 61 61 VAL VAL A . n A 1 45 TYR 45 62 62 TYR TYR A . n A 1 46 PRO 46 63 63 PRO PRO A . n A 1 47 LYS 47 64 64 LYS LYS A . n A 1 48 SER 48 65 65 SER SER A . n A 1 49 ASN 49 66 66 ASN ASN A . n A 1 50 GLN 50 67 67 GLN GLN A . n A 1 51 LYS 51 68 68 LYS LYS A . n A 1 52 ALA 52 69 69 ALA ALA A . n A 1 53 CYS 53 70 70 CYS CYS A . n A 1 54 LYS 54 71 71 LYS LYS A . n A 1 55 SER 55 72 72 SER SER A . n A 1 56 TYR 56 73 73 TYR TYR A . n A 1 57 SER 57 74 74 SER SER A . n A 1 58 ASP 58 75 75 ASP ASP A . n A 1 59 PHE 59 76 76 PHE PHE A . n A 1 60 ASP 60 77 77 ASP ASP A . n A 1 61 ILE 61 78 78 ILE ILE A . n A 1 62 SER 62 79 79 SER SER A . n A 1 63 PHE 63 80 80 PHE PHE A . n A 1 64 LYS 64 81 81 LYS LYS A . n A 1 65 SER 65 82 82 SER SER A . n A 1 66 LYS 66 83 83 LYS LYS A . n A 1 67 PRO 67 84 84 PRO PRO A . n A 1 68 GLY 68 85 85 GLY GLY A . n A 1 69 ARG 69 86 86 ARG ARG A . n A 1 70 LEU 70 87 87 LEU LEU A . n A 1 71 PRO 71 88 88 PRO PRO A . n A 1 72 THR 72 89 89 THR THR A . n A 1 73 PHE 73 90 90 PHE PHE A . n A 1 74 VAL 74 91 91 VAL VAL A . n A 1 75 LEU 75 92 92 LEU LEU A . n A 1 76 ILE 76 93 93 ILE ILE A . n A 1 77 ASP 77 94 94 ASP ASP A . n A 1 78 ARG 78 95 95 ARG ARG A . n A 1 79 GLY 79 96 96 GLY GLY A . n A 1 80 ASP 80 97 97 ASP ASP A . n A 1 81 CYS 81 98 98 CYS CYS A . n A 1 82 TYR 82 99 99 TYR TYR A . n A 1 83 PHE 83 100 100 PHE PHE A . n A 1 84 THR 84 101 101 THR THR A . n A 1 85 LEU 85 102 102 LEU LEU A . n A 1 86 LYS 86 103 103 LYS LYS A . n A 1 87 ALA 87 104 104 ALA ALA A . n A 1 88 TRP 88 105 105 TRP TRP A . n A 1 89 ILE 89 106 106 ILE ILE A . n A 1 90 ALA 90 107 107 ALA ALA A . n A 1 91 GLN 91 108 108 GLN GLN A . n A 1 92 GLN 92 109 109 GLN GLN A . n A 1 93 ALA 93 110 110 ALA ALA A . n A 1 94 GLY 94 111 111 GLY GLY A . n A 1 95 ALA 95 112 112 ALA ALA A . n A 1 96 ALA 96 113 113 ALA ALA A . n A 1 97 ALA 97 114 114 ALA ALA A . n A 1 98 ILE 98 115 115 ILE ILE A . n A 1 99 LEU 99 116 116 LEU LEU A . n A 1 100 VAL 100 117 117 VAL VAL A . n A 1 101 ALA 101 118 118 ALA ALA A . n A 1 102 ASP 102 119 119 ASP ASP A . n A 1 103 SER 103 120 120 SER SER A . n A 1 104 LYS 104 121 121 LYS LYS A . n A 1 105 ALA 105 122 122 ALA ALA A . n A 1 106 GLU 106 123 123 GLU GLU A . n A 1 107 PRO 107 124 124 PRO PRO A . n A 1 108 LEU 108 125 125 LEU LEU A . n A 1 109 ILE 109 126 126 ILE ILE A . n A 1 110 THR 110 127 127 THR THR A . n A 1 111 MET 111 128 128 MET MET A . n A 1 112 ASP 112 129 129 ASP ASP A . n A 1 113 THR 113 130 130 THR THR A . n A 1 114 PRO 114 131 131 PRO PRO A . n A 1 115 GLU 115 132 ? ? ? A . n A 1 116 GLU 116 133 ? ? ? A . n A 1 117 ASP 117 134 ? ? ? A . n A 1 118 LYS 118 135 ? ? ? A . n A 1 119 SER 119 136 ? ? ? A . n A 1 120 ASP 120 137 ? ? ? A . n A 1 121 ALA 121 138 ? ? ? A . n A 1 122 ASP 122 139 139 ASP ASP A . n A 1 123 TYR 123 140 140 TYR TYR A . n A 1 124 LEU 124 141 141 LEU LEU A . n A 1 125 GLN 125 142 142 GLN GLN A . n A 1 126 ASN 126 143 143 ASN ASN A . n A 1 127 ILE 127 144 144 ILE ILE A . n A 1 128 THR 128 145 145 THR THR A . n A 1 129 ILE 129 146 146 ILE ILE A . n A 1 130 PRO 130 147 147 PRO PRO A . n A 1 131 SER 131 148 148 SER SER A . n A 1 132 ALA 132 149 149 ALA ALA A . n A 1 133 LEU 133 150 150 LEU LEU A . n A 1 134 ILE 134 151 151 ILE ILE A . n A 1 135 THR 135 152 152 THR THR A . n A 1 136 LYS 136 153 153 LYS LYS A . n A 1 137 THR 137 154 154 THR THR A . n A 1 138 LEU 138 155 155 LEU LEU A . n A 1 139 GLY 139 156 156 GLY GLY A . n A 1 140 ASP 140 157 157 ASP ASP A . n A 1 141 SER 141 158 158 SER SER A . n A 1 142 ILE 142 159 159 ILE ILE A . n A 1 143 LYS 143 160 160 LYS LYS A . n A 1 144 SER 144 161 161 SER SER A . n A 1 145 ALA 145 162 162 ALA ALA A . n A 1 146 LEU 146 163 163 LEU LEU A . n A 1 147 SER 147 164 164 SER SER A . n A 1 148 GLY 148 165 165 GLY GLY A . n A 1 149 GLY 149 166 166 GLY GLY A . n A 1 150 ASP 150 167 167 ASP ASP A . n A 1 151 MET 151 168 168 MET MET A . n A 1 152 VAL 152 169 169 VAL VAL A . n A 1 153 ASN 153 170 170 ASN ASN A . n A 1 154 MET 154 171 171 MET MET A . n A 1 155 LYS 155 172 172 LYS LYS A . n A 1 156 LEU 156 173 173 LEU LEU A . n A 1 157 ASP 157 174 174 ASP ASP A . n A 1 158 TRP 158 175 175 TRP TRP A . n A 1 159 THR 159 176 176 THR THR A . n A 1 160 GLU 160 177 ? ? ? A . n A 1 161 SER 161 178 ? ? ? A . n A 1 162 VAL 162 179 ? ? ? A . n A 1 163 PRO 163 180 ? ? ? A . n A 1 164 HIS 164 181 ? ? ? A . n A 1 165 PRO 165 182 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email kbwong@cuhk.edu.hk _pdbx_contact_author.name_first Kam-Bo _pdbx_contact_author.name_last Wong _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6984-5373 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 201 201 ACT ACT A . C 3 PEG 1 202 202 PEG PEG A . D 4 CL 1 203 203 CL CL A . E 5 EPE 1 204 204 EPE EPE A . F 3 PEG 1 205 205 PEG PEG A . G 3 PEG 1 206 207 PEG PEG A . H 3 PEG 1 207 208 PEG PEG A . I 2 ACT 1 208 209 ACT ACT A . J 2 ACT 1 209 210 ACT ACT A . K 2 ACT 1 210 211 ACT ACT A . L 3 PEG 1 211 213 PEG PEG A . M 6 HOH 1 301 101 HOH HOH A . M 6 HOH 2 302 46 HOH HOH A . M 6 HOH 3 303 23 HOH HOH A . M 6 HOH 4 304 34 HOH HOH A . M 6 HOH 5 305 3 HOH HOH A . M 6 HOH 6 306 37 HOH HOH A . M 6 HOH 7 307 1 HOH HOH A . M 6 HOH 8 308 9 HOH HOH A . M 6 HOH 9 309 17 HOH HOH A . M 6 HOH 10 310 71 HOH HOH A . M 6 HOH 11 311 31 HOH HOH A . M 6 HOH 12 312 50 HOH HOH A . M 6 HOH 13 313 19 HOH HOH A . M 6 HOH 14 314 43 HOH HOH A . M 6 HOH 15 315 8 HOH HOH A . M 6 HOH 16 316 27 HOH HOH A . M 6 HOH 17 317 6 HOH HOH A . M 6 HOH 18 318 7 HOH HOH A . M 6 HOH 19 319 5 HOH HOH A . M 6 HOH 20 320 18 HOH HOH A . M 6 HOH 21 321 15 HOH HOH A . M 6 HOH 22 322 98 HOH HOH A . M 6 HOH 23 323 2 HOH HOH A . M 6 HOH 24 324 72 HOH HOH A . M 6 HOH 25 325 12 HOH HOH A . M 6 HOH 26 326 13 HOH HOH A . M 6 HOH 27 327 30 HOH HOH A . M 6 HOH 28 328 96 HOH HOH A . M 6 HOH 29 329 102 HOH HOH A . M 6 HOH 30 330 14 HOH HOH A . M 6 HOH 31 331 36 HOH HOH A . M 6 HOH 32 332 26 HOH HOH A . M 6 HOH 33 333 32 HOH HOH A . M 6 HOH 34 334 25 HOH HOH A . M 6 HOH 35 335 10 HOH HOH A . M 6 HOH 36 336 33 HOH HOH A . M 6 HOH 37 337 65 HOH HOH A . M 6 HOH 38 338 38 HOH HOH A . M 6 HOH 39 339 81 HOH HOH A . M 6 HOH 40 340 51 HOH HOH A . M 6 HOH 41 341 4 HOH HOH A . M 6 HOH 42 342 44 HOH HOH A . M 6 HOH 43 343 94 HOH HOH A . M 6 HOH 44 344 56 HOH HOH A . M 6 HOH 45 345 16 HOH HOH A . M 6 HOH 46 346 48 HOH HOH A . M 6 HOH 47 347 79 HOH HOH A . M 6 HOH 48 348 35 HOH HOH A . M 6 HOH 49 349 29 HOH HOH A . M 6 HOH 50 350 20 HOH HOH A . M 6 HOH 51 351 21 HOH HOH A . M 6 HOH 52 352 60 HOH HOH A . M 6 HOH 53 353 70 HOH HOH A . M 6 HOH 54 354 92 HOH HOH A . M 6 HOH 55 355 95 HOH HOH A . M 6 HOH 56 356 55 HOH HOH A . M 6 HOH 57 357 62 HOH HOH A . M 6 HOH 58 358 11 HOH HOH A . M 6 HOH 59 359 40 HOH HOH A . M 6 HOH 60 360 28 HOH HOH A . M 6 HOH 61 361 49 HOH HOH A . M 6 HOH 62 362 24 HOH HOH A . M 6 HOH 63 363 77 HOH HOH A . M 6 HOH 64 364 41 HOH HOH A . M 6 HOH 65 365 57 HOH HOH A . M 6 HOH 66 366 22 HOH HOH A . M 6 HOH 67 367 39 HOH HOH A . M 6 HOH 68 368 91 HOH HOH A . M 6 HOH 69 369 90 HOH HOH A . M 6 HOH 70 370 63 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2280 ? 1 MORE 4 ? 1 'SSA (A^2)' 7590 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8HYG _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 97 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 72.71 _pdbx_validate_torsion.psi -27.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 25 ? CG ? A LYS 8 CG 2 1 Y 1 A LYS 25 ? CD ? A LYS 8 CD 3 1 Y 1 A LYS 25 ? CE ? A LYS 8 CE 4 1 Y 1 A LYS 25 ? NZ ? A LYS 8 NZ 5 1 Y 1 A LYS 29 ? CE ? A LYS 12 CE 6 1 Y 1 A LYS 29 ? NZ ? A LYS 12 NZ 7 1 Y 1 A ASP 34 ? OD1 ? A ASP 17 OD1 8 1 Y 1 A ASP 34 ? OD2 ? A ASP 17 OD2 9 1 Y 1 A LYS 37 ? CD ? A LYS 20 CD 10 1 Y 1 A LYS 37 ? CE ? A LYS 20 CE 11 1 Y 1 A LYS 37 ? NZ ? A LYS 20 NZ 12 1 Y 1 A GLY 48 ? C ? A GLY 31 C 13 1 Y 1 A GLY 48 ? O ? A GLY 31 O 14 1 Y 1 A GLY 54 ? N ? A GLY 37 N 15 1 Y 1 A GLY 54 ? CA ? A GLY 37 CA 16 1 Y 1 A GLY 54 ? O ? A GLY 37 O 17 1 Y 1 A LYS 64 ? CD ? A LYS 47 CD 18 1 Y 1 A LYS 64 ? CE ? A LYS 47 CE 19 1 Y 1 A LYS 64 ? NZ ? A LYS 47 NZ 20 1 Y 1 A LYS 71 ? CG ? A LYS 54 CG 21 1 Y 1 A LYS 71 ? CD ? A LYS 54 CD 22 1 Y 1 A LYS 71 ? CE ? A LYS 54 CE 23 1 Y 1 A LYS 71 ? NZ ? A LYS 54 NZ 24 1 Y 1 A LYS 83 ? CD ? A LYS 66 CD 25 1 Y 1 A LYS 83 ? CE ? A LYS 66 CE 26 1 Y 1 A LYS 83 ? NZ ? A LYS 66 NZ 27 1 Y 1 A ARG 86 ? CD ? A ARG 69 CD 28 1 Y 1 A ARG 86 ? NE ? A ARG 69 NE 29 1 Y 1 A ARG 86 ? CZ ? A ARG 69 CZ 30 1 Y 1 A ARG 86 ? NH1 ? A ARG 69 NH1 31 1 Y 1 A ARG 86 ? NH2 ? A ARG 69 NH2 32 1 Y 1 A THR 130 ? OG1 ? A THR 113 OG1 33 1 Y 1 A THR 130 ? CG2 ? A THR 113 CG2 34 1 Y 1 A ASP 139 ? CG ? A ASP 122 CG 35 1 Y 1 A ASP 139 ? OD1 ? A ASP 122 OD1 36 1 Y 1 A ASP 139 ? OD2 ? A ASP 122 OD2 37 1 Y 1 A LEU 141 ? CD1 ? A LEU 124 CD1 38 1 Y 1 A LEU 141 ? CD2 ? A LEU 124 CD2 39 1 Y 1 A ASP 174 ? CG ? A ASP 157 CG 40 1 Y 1 A ASP 174 ? OD1 ? A ASP 157 OD1 41 1 Y 1 A ASP 174 ? OD2 ? A ASP 157 OD2 42 1 Y 1 A TRP 175 ? CG ? A TRP 158 CG 43 1 Y 1 A TRP 175 ? CD1 ? A TRP 158 CD1 44 1 Y 1 A TRP 175 ? CD2 ? A TRP 158 CD2 45 1 Y 1 A TRP 175 ? NE1 ? A TRP 158 NE1 46 1 Y 1 A TRP 175 ? CE2 ? A TRP 158 CE2 47 1 Y 1 A TRP 175 ? CE3 ? A TRP 158 CE3 48 1 Y 1 A TRP 175 ? CZ2 ? A TRP 158 CZ2 49 1 Y 1 A TRP 175 ? CZ3 ? A TRP 158 CZ3 50 1 Y 1 A TRP 175 ? CH2 ? A TRP 158 CH2 51 1 N 1 A PEG 202 ? C1 ? C PEG 1 C1 52 1 N 1 A PEG 202 ? O1 ? C PEG 1 O1 53 1 N 1 A EPE 204 ? C8 ? E EPE 1 C8 54 1 N 1 A EPE 204 ? O8 ? E EPE 1 O8 55 1 N 1 A PEG 205 ? C1 ? F PEG 1 C1 56 1 N 1 A PEG 205 ? O1 ? F PEG 1 O1 57 1 N 1 A PEG 206 ? C1 ? G PEG 1 C1 58 1 N 1 A PEG 206 ? O1 ? G PEG 1 O1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 49 ? A VAL 32 2 1 Y 1 A PRO 50 ? A PRO 33 3 1 Y 1 A GLN 51 ? A GLN 34 4 1 Y 1 A TYR 52 ? A TYR 35 5 1 Y 1 A GLY 53 ? A GLY 36 6 1 Y 1 A GLU 132 ? A GLU 115 7 1 Y 1 A GLU 133 ? A GLU 116 8 1 Y 1 A ASP 134 ? A ASP 117 9 1 Y 1 A LYS 135 ? A LYS 118 10 1 Y 1 A SER 136 ? A SER 119 11 1 Y 1 A ASP 137 ? A ASP 120 12 1 Y 1 A ALA 138 ? A ALA 121 13 1 Y 1 A GLU 177 ? A GLU 160 14 1 Y 1 A SER 178 ? A SER 161 15 1 Y 1 A VAL 179 ? A VAL 162 16 1 Y 1 A PRO 180 ? A PRO 163 17 1 Y 1 A HIS 181 ? A HIS 164 18 1 Y 1 A PRO 182 ? A PRO 165 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'The University Grants Committee, Research Grants Council (RGC)' 'Hong Kong' CUHK14151416 1 'The University Grants Committee, Research Grants Council (RGC)' 'Hong Kong' C4041-18EF 2 'The University Grants Committee, Research Grants Council (RGC)' 'Hong Kong' AoE/M-05/12 3 'The University Grants Committee, Research Grants Council (RGC)' 'Hong Kong' AoE/M403/16 4 'The University Grants Committee, Research Grants Council (RGC)' 'Hong Kong' C4033-19E 5 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'DI(HYDROXYETHYL)ETHER' PEG 4 'CHLORIDE ION' CL 5 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4TJV _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details ? #