HEADER CHAPERONE 12-JAN-23 8I17 TITLE STRUCTURAL BASIS FOR H2A-H2B RECOGNITIONS BY HUMAN SPT16 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE H2A TYPE 1-B/E; COMPND 3 CHAIN: A, D, G; COMPND 4 SYNONYM: HISTONE H2A.2,HISTONE H2A/A,HISTONE H2A/M; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HISTONE H2B TYPE 1-J; COMPND 8 CHAIN: B, E, H; COMPND 9 SYNONYM: HISTONE H2B.1,HISTONE H2B.R,H2B/R; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: FACT COMPLEX SUBUNIT SPT16; COMPND 13 CHAIN: F, I, C; COMPND 14 FRAGMENT: C-TERMINAL DOMAIN; COMPND 15 SYNONYM: CHROMATIN-SPECIFIC TRANSCRIPTION ELONGATION FACTOR 140 KDA COMPND 16 SUBUNIT,FACT 140 KDA SUBUNIT,FACTP140,FACILITATES CHROMATIN COMPND 17 TRANSCRIPTION COMPLEX SUBUNIT SPT16,HSPT16; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: H2AC4, H2AFM, HIST1H2AB, H2AC8, H2AFA, HIST1H2AE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: H2BC11, H2BFR, HIST1H2BJ; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: SUPT16H, FACT140, FACTP140; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 37762 KEYWDS HISTONE CHAPERONE, HISTONE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR H.HUANG,Y.LI REVDAT 2 08-MAR-23 8I17 1 JRNL REVDAT 1 22-FEB-23 8I17 0 JRNL AUTH Y.LI,H.HUANG JRNL TITL STRUCTURAL BASIS FOR H2A-H2B RECOGNITIONS BY HUMAN SPT16. JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 651 85 2023 JRNL REFN ESSN 1090-2104 JRNL PMID 36801613 JRNL DOI 10.1016/J.BBRC.2023.02.016 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX PHENIX1.19.2-4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 42470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.140 REMARK 3 FREE R VALUE TEST SET COUNT : 2181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1910 - 4.9806 0.93 2484 122 0.1647 0.2225 REMARK 3 2 4.9806 - 3.9544 0.96 2574 117 0.1463 0.1631 REMARK 3 3 3.9544 - 3.4548 0.94 2502 119 0.1573 0.1828 REMARK 3 4 3.4548 - 3.1391 0.96 2562 154 0.1716 0.2032 REMARK 3 5 3.1391 - 2.9142 0.97 2557 143 0.1869 0.2396 REMARK 3 6 2.9142 - 2.7424 0.94 2462 147 0.1886 0.2135 REMARK 3 7 2.7424 - 2.6051 0.96 2576 112 0.1844 0.2345 REMARK 3 8 2.6051 - 2.4917 0.97 2609 126 0.1727 0.2285 REMARK 3 9 2.4917 - 2.3958 0.97 2621 119 0.1706 0.2300 REMARK 3 10 2.3958 - 2.3131 0.97 2576 135 0.1746 0.2267 REMARK 3 11 2.3131 - 2.2408 0.93 2424 165 0.1715 0.2181 REMARK 3 12 2.2408 - 2.1767 0.96 2582 151 0.1868 0.2216 REMARK 3 13 2.1767 - 2.1194 0.96 2503 151 0.1997 0.2626 REMARK 3 14 2.1194 - 2.0677 0.96 2552 152 0.2234 0.2665 REMARK 3 15 2.0677 - 2.0207 0.93 2461 146 0.2378 0.2817 REMARK 3 16 2.0207 - 1.9800 0.85 2244 122 0.2860 0.3263 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4394 REMARK 3 ANGLE : 0.721 5923 REMARK 3 CHIRALITY : 0.048 683 REMARK 3 PLANARITY : 0.004 762 REMARK 3 DIHEDRAL : 17.619 2695 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 16 THROUGH 100) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5078 -2.3524 -0.0790 REMARK 3 T TENSOR REMARK 3 T11: 0.2807 T22: 0.3220 REMARK 3 T33: 0.1932 T12: -0.1037 REMARK 3 T13: -0.0058 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 2.6877 L22: 6.8395 REMARK 3 L33: 4.5600 L12: 0.3820 REMARK 3 L13: 0.4756 L23: 1.2079 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: -0.0843 S13: -0.0483 REMARK 3 S21: -0.3586 S22: 0.0528 S23: 0.1053 REMARK 3 S31: 0.2275 S32: -0.1731 S33: 0.0070 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 35 THROUGH 124) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4460 3.6953 0.5298 REMARK 3 T TENSOR REMARK 3 T11: 0.2767 T22: 0.2742 REMARK 3 T33: 0.2530 T12: -0.0164 REMARK 3 T13: 0.0252 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.4325 L22: 3.4907 REMARK 3 L33: 4.5855 L12: 0.7393 REMARK 3 L13: 1.3382 L23: 1.1554 REMARK 3 S TENSOR REMARK 3 S11: -0.2949 S12: 0.0507 S13: 0.1771 REMARK 3 S21: -0.2818 S22: 0.2043 S23: 0.0643 REMARK 3 S31: -0.2719 S32: -0.0372 S33: 0.0783 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 16 THROUGH 99) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4048 2.4993 23.9936 REMARK 3 T TENSOR REMARK 3 T11: 0.2868 T22: 0.2428 REMARK 3 T33: 0.2409 T12: -0.0546 REMARK 3 T13: -0.0141 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 6.2311 L22: 4.3338 REMARK 3 L33: 2.6721 L12: -3.2395 REMARK 3 L13: 1.4346 L23: -0.2737 REMARK 3 S TENSOR REMARK 3 S11: 0.1003 S12: 0.0690 S13: 0.0790 REMARK 3 S21: -0.1604 S22: -0.0450 S23: -0.0100 REMARK 3 S31: -0.1147 S32: -0.0225 S33: -0.0387 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'E' AND RESID 34 THROUGH 124) REMARK 3 ORIGIN FOR THE GROUP (A): 22.4870 -0.6947 23.5929 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.2730 REMARK 3 T33: 0.2061 T12: -0.0203 REMARK 3 T13: 0.0255 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 5.1786 L22: 3.9126 REMARK 3 L33: 2.5942 L12: -2.0667 REMARK 3 L13: 1.3898 L23: -1.0536 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: -0.0138 S13: -0.1396 REMARK 3 S21: -0.1504 S22: -0.0987 S23: -0.1133 REMARK 3 S31: 0.0606 S32: 0.2892 S33: 0.0305 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN 'G' AND RESID 18 THROUGH 99) REMARK 3 ORIGIN FOR THE GROUP (A): 25.3602 -9.8728 50.8652 REMARK 3 T TENSOR REMARK 3 T11: 0.4262 T22: 0.4640 REMARK 3 T33: 0.2299 T12: 0.0347 REMARK 3 T13: -0.0648 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 5.0715 L22: 5.7754 REMARK 3 L33: 6.2100 L12: 2.8519 REMARK 3 L13: -0.5798 L23: -1.8154 REMARK 3 S TENSOR REMARK 3 S11: 0.1825 S12: 0.2997 S13: -0.0130 REMARK 3 S21: 0.6326 S22: -0.0202 S23: -0.1157 REMARK 3 S31: -0.1560 S32: 0.3150 S33: -0.1461 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN 'H' AND RESID 34 THROUGH 123) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5954 -13.3272 52.9631 REMARK 3 T TENSOR REMARK 3 T11: 0.4171 T22: 0.3015 REMARK 3 T33: 0.3112 T12: 0.0301 REMARK 3 T13: -0.0255 T23: 0.0094 REMARK 3 L TENSOR REMARK 3 L11: 2.6047 L22: 4.1773 REMARK 3 L33: 6.2457 L12: 2.2965 REMARK 3 L13: -1.6432 L23: -2.6874 REMARK 3 S TENSOR REMARK 3 S11: 0.3980 S12: 0.0179 S13: -0.0487 REMARK 3 S21: 0.6317 S22: -0.1777 S23: 0.1438 REMARK 3 S31: 0.0878 S32: 0.0067 S33: -0.2037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8I17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1300034753. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JAN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97849 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42483 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.51000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1AOI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES MONOHYDRATE PH 6.0, 14% W/V REMARK 280 POLYETHYLENE GLYCOL 4,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 13 REMARK 465 ALA A 14 REMARK 465 LYS A 15 REMARK 465 THR A 101 REMARK 465 ILE A 102 REMARK 465 ALA A 103 REMARK 465 GLN A 104 REMARK 465 GLY A 105 REMARK 465 GLY A 106 REMARK 465 VAL A 107 REMARK 465 LEU A 108 REMARK 465 PRO A 109 REMARK 465 ASN A 110 REMARK 465 ILE A 111 REMARK 465 GLN A 112 REMARK 465 SER B 26 REMARK 465 LYS B 27 REMARK 465 LYS B 28 REMARK 465 ARG B 29 REMARK 465 LYS B 30 REMARK 465 ARG B 31 REMARK 465 SER B 32 REMARK 465 ARG B 33 REMARK 465 LYS B 34 REMARK 465 LYS B 125 REMARK 465 LYS D 13 REMARK 465 ALA D 14 REMARK 465 LYS D 15 REMARK 465 VAL D 100 REMARK 465 THR D 101 REMARK 465 ILE D 102 REMARK 465 ALA D 103 REMARK 465 GLN D 104 REMARK 465 GLY D 105 REMARK 465 GLY D 106 REMARK 465 VAL D 107 REMARK 465 LEU D 108 REMARK 465 PRO D 109 REMARK 465 ASN D 110 REMARK 465 ILE D 111 REMARK 465 GLN D 112 REMARK 465 SER E 26 REMARK 465 LYS E 27 REMARK 465 LYS E 28 REMARK 465 ARG E 29 REMARK 465 LYS E 30 REMARK 465 ARG E 31 REMARK 465 SER E 32 REMARK 465 ARG E 33 REMARK 465 LYS E 125 REMARK 465 LYS G 13 REMARK 465 ALA G 14 REMARK 465 LYS G 15 REMARK 465 THR G 16 REMARK 465 ARG G 17 REMARK 465 VAL G 100 REMARK 465 THR G 101 REMARK 465 ILE G 102 REMARK 465 ALA G 103 REMARK 465 GLN G 104 REMARK 465 GLY G 105 REMARK 465 GLY G 106 REMARK 465 VAL G 107 REMARK 465 LEU G 108 REMARK 465 PRO G 109 REMARK 465 ASN G 110 REMARK 465 ILE G 111 REMARK 465 GLN G 112 REMARK 465 SER H 26 REMARK 465 LYS H 27 REMARK 465 LYS H 28 REMARK 465 ARG H 29 REMARK 465 LYS H 30 REMARK 465 ARG H 31 REMARK 465 SER H 32 REMARK 465 ARG H 33 REMARK 465 ALA H 124 REMARK 465 LYS H 125 REMARK 465 GLY F 924 REMARK 465 PRO F 925 REMARK 465 GLU F 926 REMARK 465 PRO F 927 REMARK 465 GLU F 928 REMARK 465 GLY F 929 REMARK 465 GLU F 930 REMARK 465 GLY F 931 REMARK 465 SER F 932 REMARK 465 ASP F 933 REMARK 465 ALA F 934 REMARK 465 GLU F 935 REMARK 465 GLU F 936 REMARK 465 GLY F 937 REMARK 465 ASP F 938 REMARK 465 SER F 939 REMARK 465 ASP F 953 REMARK 465 ASP F 954 REMARK 465 TYR F 955 REMARK 465 GLU F 956 REMARK 465 GLU F 957 REMARK 465 GLU F 958 REMARK 465 GLU F 959 REMARK 465 GLU F 960 REMARK 465 ASP F 961 REMARK 465 SER F 962 REMARK 465 ASP F 963 REMARK 465 GLU F 964 REMARK 465 ASP F 965 REMARK 465 GLY I 924 REMARK 465 PRO I 925 REMARK 465 GLU I 926 REMARK 465 PRO I 927 REMARK 465 GLU I 928 REMARK 465 GLY I 929 REMARK 465 GLU I 930 REMARK 465 GLY I 931 REMARK 465 SER I 932 REMARK 465 ASP I 933 REMARK 465 ALA I 934 REMARK 465 GLU I 935 REMARK 465 GLU I 936 REMARK 465 GLY I 937 REMARK 465 ASP I 938 REMARK 465 SER I 939 REMARK 465 GLU I 940 REMARK 465 SER I 941 REMARK 465 GLU I 942 REMARK 465 ILE I 943 REMARK 465 ASP I 953 REMARK 465 ASP I 954 REMARK 465 TYR I 955 REMARK 465 GLU I 956 REMARK 465 GLU I 957 REMARK 465 GLU I 958 REMARK 465 GLU I 959 REMARK 465 GLU I 960 REMARK 465 ASP I 961 REMARK 465 SER I 962 REMARK 465 ASP I 963 REMARK 465 GLU I 964 REMARK 465 ASP I 965 REMARK 465 GLY C 924 REMARK 465 PRO C 925 REMARK 465 GLU C 926 REMARK 465 PRO C 927 REMARK 465 GLU C 928 REMARK 465 GLY C 929 REMARK 465 GLU C 930 REMARK 465 GLY C 931 REMARK 465 SER C 932 REMARK 465 ASP C 933 REMARK 465 ALA C 934 REMARK 465 GLU C 935 REMARK 465 GLU C 936 REMARK 465 GLU C 952 REMARK 465 ASP C 953 REMARK 465 ASP C 954 REMARK 465 TYR C 955 REMARK 465 GLU C 956 REMARK 465 GLU C 957 REMARK 465 GLU C 958 REMARK 465 GLU C 959 REMARK 465 GLU C 960 REMARK 465 ASP C 961 REMARK 465 SER C 962 REMARK 465 ASP C 963 REMARK 465 GLU C 964 REMARK 465 ASP C 965 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 GLU B 35 CG CD OE1 OE2 REMARK 470 GLN D 84 CG CD OE1 NE2 REMARK 470 ARG D 99 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 34 CG CD CE NZ REMARK 470 GLN E 47 CD OE1 NE2 REMARK 470 ARG G 99 CG CD NE CZ NH1 NH2 REMARK 470 LYS H 34 CG CD CE NZ REMARK 470 GLU F 940 CG CD OE1 OE2 REMARK 470 GLU I 944 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG D 29 O SER E 36 2.09 REMARK 500 O HOH H 210 O HOH H 214 2.16 REMARK 500 REMARK 500 REMARK: NULL DBREF 8I17 A 13 112 UNP P04908 H2A1B_HUMAN 14 113 DBREF 8I17 B 27 125 UNP P06899 H2B1J_HUMAN 28 126 DBREF 8I17 D 13 112 UNP P04908 H2A1B_HUMAN 14 113 DBREF 8I17 E 27 125 UNP P06899 H2B1J_HUMAN 28 126 DBREF 8I17 G 13 112 UNP P04908 H2A1B_HUMAN 14 113 DBREF 8I17 H 27 125 UNP P06899 H2B1J_HUMAN 28 126 DBREF 8I17 F 926 965 UNP Q9Y5B9 SP16H_HUMAN 926 965 DBREF 8I17 I 926 965 UNP Q9Y5B9 SP16H_HUMAN 926 965 DBREF 8I17 C 926 965 UNP Q9Y5B9 SP16H_HUMAN 926 965 SEQADV 8I17 SER B 26 UNP P06899 EXPRESSION TAG SEQADV 8I17 SER E 26 UNP P06899 EXPRESSION TAG SEQADV 8I17 SER H 26 UNP P06899 EXPRESSION TAG SEQADV 8I17 GLY F 924 UNP Q9Y5B9 EXPRESSION TAG SEQADV 8I17 PRO F 925 UNP Q9Y5B9 EXPRESSION TAG SEQADV 8I17 GLY I 924 UNP Q9Y5B9 EXPRESSION TAG SEQADV 8I17 PRO I 925 UNP Q9Y5B9 EXPRESSION TAG SEQADV 8I17 GLY C 924 UNP Q9Y5B9 EXPRESSION TAG SEQADV 8I17 PRO C 925 UNP Q9Y5B9 EXPRESSION TAG SEQRES 1 A 100 LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 2 A 100 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 3 A 100 TYR SER GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU SEQRES 4 A 100 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 5 A 100 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 6 A 100 ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP SEQRES 7 A 100 GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA SEQRES 8 A 100 GLN GLY GLY VAL LEU PRO ASN ILE GLN SEQRES 1 B 100 SER LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER SEQRES 2 B 100 ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP SEQRES 3 B 100 THR GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER SEQRES 4 B 100 PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SEQRES 5 B 100 SER ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SEQRES 6 B 100 SER ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO SEQRES 7 B 100 GLY GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS SEQRES 8 B 100 ALA VAL THR LYS TYR THR SER ALA LYS SEQRES 1 D 100 LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 2 D 100 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 3 D 100 TYR SER GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU SEQRES 4 D 100 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 5 D 100 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 6 D 100 ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP SEQRES 7 D 100 GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA SEQRES 8 D 100 GLN GLY GLY VAL LEU PRO ASN ILE GLN SEQRES 1 E 100 SER LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER SEQRES 2 E 100 ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP SEQRES 3 E 100 THR GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER SEQRES 4 E 100 PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SEQRES 5 E 100 SER ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SEQRES 6 E 100 SER ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO SEQRES 7 E 100 GLY GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS SEQRES 8 E 100 ALA VAL THR LYS TYR THR SER ALA LYS SEQRES 1 G 100 LYS ALA LYS THR ARG SER SER ARG ALA GLY LEU GLN PHE SEQRES 2 G 100 PRO VAL GLY ARG VAL HIS ARG LEU LEU ARG LYS GLY ASN SEQRES 3 G 100 TYR SER GLU ARG VAL GLY ALA GLY ALA PRO VAL TYR LEU SEQRES 4 G 100 ALA ALA VAL LEU GLU TYR LEU THR ALA GLU ILE LEU GLU SEQRES 5 G 100 LEU ALA GLY ASN ALA ALA ARG ASP ASN LYS LYS THR ARG SEQRES 6 G 100 ILE ILE PRO ARG HIS LEU GLN LEU ALA ILE ARG ASN ASP SEQRES 7 G 100 GLU GLU LEU ASN LYS LEU LEU GLY ARG VAL THR ILE ALA SEQRES 8 G 100 GLN GLY GLY VAL LEU PRO ASN ILE GLN SEQRES 1 H 100 SER LYS LYS ARG LYS ARG SER ARG LYS GLU SER TYR SER SEQRES 2 H 100 ILE TYR VAL TYR LYS VAL LEU LYS GLN VAL HIS PRO ASP SEQRES 3 H 100 THR GLY ILE SER SER LYS ALA MET GLY ILE MET ASN SER SEQRES 4 H 100 PHE VAL ASN ASP ILE PHE GLU ARG ILE ALA GLY GLU ALA SEQRES 5 H 100 SER ARG LEU ALA HIS TYR ASN LYS ARG SER THR ILE THR SEQRES 6 H 100 SER ARG GLU ILE GLN THR ALA VAL ARG LEU LEU LEU PRO SEQRES 7 H 100 GLY GLU LEU ALA LYS HIS ALA VAL SER GLU GLY THR LYS SEQRES 8 H 100 ALA VAL THR LYS TYR THR SER ALA LYS SEQRES 1 F 42 GLY PRO GLU PRO GLU GLY GLU GLY SER ASP ALA GLU GLU SEQRES 2 F 42 GLY ASP SER GLU SER GLU ILE GLU ASP GLU THR PHE ASN SEQRES 3 F 42 PRO SER GLU ASP ASP TYR GLU GLU GLU GLU GLU ASP SER SEQRES 4 F 42 ASP GLU ASP SEQRES 1 I 42 GLY PRO GLU PRO GLU GLY GLU GLY SER ASP ALA GLU GLU SEQRES 2 I 42 GLY ASP SER GLU SER GLU ILE GLU ASP GLU THR PHE ASN SEQRES 3 I 42 PRO SER GLU ASP ASP TYR GLU GLU GLU GLU GLU ASP SER SEQRES 4 I 42 ASP GLU ASP SEQRES 1 C 42 GLY PRO GLU PRO GLU GLY GLU GLY SER ASP ALA GLU GLU SEQRES 2 C 42 GLY ASP SER GLU SER GLU ILE GLU ASP GLU THR PHE ASN SEQRES 3 C 42 PRO SER GLU ASP ASP TYR GLU GLU GLU GLU GLU ASP SER SEQRES 4 C 42 ASP GLU ASP HET CL A 201 1 HET CL E 201 1 HETNAM CL CHLORIDE ION FORMUL 10 CL 2(CL 1-) FORMUL 12 HOH *96(H2 O) HELIX 1 AA1 THR A 16 ALA A 21 1 6 HELIX 2 AA2 PRO A 26 GLY A 37 1 12 HELIX 3 AA3 ALA A 45 ASN A 73 1 29 HELIX 4 AA4 ILE A 79 ASP A 90 1 12 HELIX 5 AA5 ASP A 90 GLY A 98 1 9 HELIX 6 AA6 TYR B 37 HIS B 49 1 13 HELIX 7 AA7 SER B 55 ASN B 84 1 30 HELIX 8 AA8 THR B 90 LEU B 102 1 13 HELIX 9 AA9 PRO B 103 ALA B 124 1 22 HELIX 10 AB1 ARG D 17 ALA D 21 1 5 HELIX 11 AB2 PRO D 26 GLY D 37 1 12 HELIX 12 AB3 ALA D 45 ASN D 73 1 29 HELIX 13 AB4 ILE D 79 ASN D 89 1 11 HELIX 14 AB5 ASP D 90 GLY D 98 1 9 HELIX 15 AB6 TYR E 37 HIS E 49 1 13 HELIX 16 AB7 SER E 55 ASN E 84 1 30 HELIX 17 AB8 THR E 90 LEU E 102 1 13 HELIX 18 AB9 PRO E 103 ALA E 124 1 22 HELIX 19 AC1 PRO G 26 GLY G 37 1 12 HELIX 20 AC2 ALA G 45 ASN G 73 1 29 HELIX 21 AC3 ILE G 79 ASP G 90 1 12 HELIX 22 AC4 ASP G 90 GLY G 98 1 9 HELIX 23 AC5 TYR H 37 HIS H 49 1 13 HELIX 24 AC6 SER H 55 ASN H 84 1 30 HELIX 25 AC7 THR H 90 LEU H 102 1 13 HELIX 26 AC8 PRO H 103 SER H 123 1 21 HELIX 27 AC9 SER F 941 ASP F 945 1 5 HELIX 28 AD1 ASP C 938 ASP C 945 1 8 SHEET 1 AA1 2 ARG A 42 VAL A 43 0 SHEET 2 AA1 2 THR B 88 ILE B 89 1 O ILE B 89 N ARG A 42 SHEET 1 AA2 2 ARG A 77 ILE A 78 0 SHEET 2 AA2 2 GLY B 53 ILE B 54 1 O GLY B 53 N ILE A 78 SHEET 1 AA3 2 ARG D 42 VAL D 43 0 SHEET 2 AA3 2 THR E 88 ILE E 89 1 O ILE E 89 N ARG D 42 SHEET 1 AA4 2 ARG D 77 ILE D 78 0 SHEET 2 AA4 2 GLY E 53 ILE E 54 1 O GLY E 53 N ILE D 78 SHEET 1 AA5 2 ARG G 42 VAL G 43 0 SHEET 2 AA5 2 THR H 88 ILE H 89 1 O ILE H 89 N ARG G 42 SHEET 1 AA6 2 ARG G 77 ILE G 78 0 SHEET 2 AA6 2 GLY H 53 ILE H 54 1 O GLY H 53 N ILE G 78 CRYST1 46.852 49.084 85.195 85.95 74.31 61.80 P 1 3 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021344 -0.011444 -0.006785 0.00000 SCALE2 0.000000 0.023117 0.001563 0.00000 SCALE3 0.000000 0.000000 0.012220 0.00000