data_8I1G # _entry.id 8I1G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8I1G pdb_00008i1g 10.2210/pdb8i1g/pdb WWPDB D_1300034401 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8I1G _pdbx_database_status.recvd_initial_deposition_date 2023-01-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nakamura, T.' 1 ? 'Yamagata, Y.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Febs Lett.' _citation.journal_id_ASTM FEBLAL _citation.journal_id_CSD 0165 _citation.journal_id_ISSN 0014-5793 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 597 _citation.language ? _citation.page_first 1770 _citation.page_last 1778 _citation.title 'Protonation states of Asp residues in the human Nudix hydrolase MTH1 contribute to its broad substrate recognition.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/1873-3468.14611 _citation.pdbx_database_id_PubMed 36914375 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakamura, T.' 1 ? primary 'Koga-Ogawa, Y.' 2 ? primary 'Fujimiya, K.' 3 ? primary 'Chirifu, M.' 4 ? primary 'Goto, M.' 5 ? primary 'Ikemizu, S.' 6 ? primary 'Nakabeppu, Y.' 7 ? primary 'Yamagata, Y.' 8 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8I1G _cell.details ? _cell.formula_units_Z ? _cell.length_a 45.914 _cell.length_a_esd ? _cell.length_b 48.009 _cell.length_b_esd ? _cell.length_c 124.144 _cell.length_c_esd ? _cell.volume 273648.785 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8I1G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '7,8-dihydro-8-oxoguanine triphosphatase' 18043.590 2 3.6.1.55,3.6.1.56 ? 'UNP residues 42-197' ? 2 non-polymer syn ;[[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate ; 507.181 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 5 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 334 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MutT homologue-1,2-hydroxy-dATP diphosphatase,8-oxo-dGTPase,Nucleoside diphosphate-linked moiety X motif 1,Nudix motif 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL MDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_seq_one_letter_code_can ;MKASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL MDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ALA n 1 4 SER n 1 5 ARG n 1 6 LEU n 1 7 TYR n 1 8 THR n 1 9 LEU n 1 10 VAL n 1 11 LEU n 1 12 VAL n 1 13 LEU n 1 14 GLN n 1 15 PRO n 1 16 GLN n 1 17 ARG n 1 18 VAL n 1 19 LEU n 1 20 LEU n 1 21 GLY n 1 22 MET n 1 23 LYS n 1 24 LYS n 1 25 ARG n 1 26 GLY n 1 27 PHE n 1 28 GLY n 1 29 ALA n 1 30 GLY n 1 31 ARG n 1 32 TRP n 1 33 ASN n 1 34 GLY n 1 35 PHE n 1 36 GLY n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 GLN n 1 41 GLU n 1 42 GLY n 1 43 GLU n 1 44 THR n 1 45 ILE n 1 46 GLU n 1 47 ASP n 1 48 GLY n 1 49 ALA n 1 50 ARG n 1 51 ARG n 1 52 GLU n 1 53 LEU n 1 54 GLN n 1 55 GLU n 1 56 GLU n 1 57 SER n 1 58 GLY n 1 59 LEU n 1 60 THR n 1 61 VAL n 1 62 ASP n 1 63 ALA n 1 64 LEU n 1 65 HIS n 1 66 LYS n 1 67 VAL n 1 68 GLY n 1 69 GLN n 1 70 ILE n 1 71 VAL n 1 72 PHE n 1 73 GLU n 1 74 PHE n 1 75 VAL n 1 76 GLY n 1 77 GLU n 1 78 PRO n 1 79 GLU n 1 80 LEU n 1 81 MET n 1 82 ASP n 1 83 VAL n 1 84 HIS n 1 85 VAL n 1 86 PHE n 1 87 CYS n 1 88 THR n 1 89 ASP n 1 90 SER n 1 91 ILE n 1 92 GLN n 1 93 GLY n 1 94 THR n 1 95 PRO n 1 96 VAL n 1 97 GLU n 1 98 SER n 1 99 ASP n 1 100 GLU n 1 101 MET n 1 102 ARG n 1 103 PRO n 1 104 CYS n 1 105 TRP n 1 106 PHE n 1 107 GLN n 1 108 LEU n 1 109 ASP n 1 110 GLN n 1 111 ILE n 1 112 PRO n 1 113 PHE n 1 114 LYS n 1 115 ASP n 1 116 MET n 1 117 TRP n 1 118 PRO n 1 119 ASP n 1 120 ASP n 1 121 SER n 1 122 TYR n 1 123 TRP n 1 124 PHE n 1 125 PRO n 1 126 LEU n 1 127 LEU n 1 128 LEU n 1 129 GLN n 1 130 LYS n 1 131 LYS n 1 132 LYS n 1 133 PHE n 1 134 HIS n 1 135 GLY n 1 136 TYR n 1 137 PHE n 1 138 LYS n 1 139 PHE n 1 140 GLN n 1 141 GLY n 1 142 GLN n 1 143 ASP n 1 144 THR n 1 145 ILE n 1 146 LEU n 1 147 ASP n 1 148 TYR n 1 149 THR n 1 150 LEU n 1 151 ARG n 1 152 GLU n 1 153 VAL n 1 154 ASP n 1 155 THR n 1 156 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 156 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NUDT1, MTH1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code 8ODP_HUMAN _struct_ref.pdbx_db_accession P36639 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPEL MDVHVFCTDSIQGTPVESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV ; _struct_ref.pdbx_align_begin 42 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8I1G A 1 ? 156 ? P36639 42 ? 197 ? 1 156 2 1 8I1G B 1 ? 156 ? P36639 42 ? 197 ? 1 156 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8I1G LYS A 2 ? UNP P36639 GLY 43 'engineered mutation' 2 1 2 8I1G LYS B 2 ? UNP P36639 GLY 43 'engineered mutation' 2 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6U4 non-polymer . ;[[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate ; 2-oxo-dATP 'C10 H16 N5 O13 P3' 507.181 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8I1G _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'sodium citrate, tris, NaCl' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-11-29 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE AR-NE3A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline AR-NE3A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate 11.34 _reflns.entry_id 8I1G _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.18 _reflns.d_resolution_low 33.18 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 90997 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.18 _reflns_shell.d_res_low 1.25 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 74880 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.37 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 19.57 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8I1G _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.18 _refine.ls_d_res_low 33.18 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 90992 _refine.ls_number_reflns_R_free 4490 _refine.ls_number_reflns_R_work 86502 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.14 _refine.ls_percent_reflns_R_free 4.93 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1399 _refine.ls_R_factor_R_free 0.1713 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1382 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.37 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 14.9977 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0875 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.18 _refine_hist.d_res_low 33.18 _refine_hist.number_atoms_solvent 334 _refine_hist.number_atoms_total 2905 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2523 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0095 ? 2975 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0411 ? 4064 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0790 ? 415 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0087 ? 538 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.0204 ? 1141 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.18 1.19 . . 122 2476 86.14 . . . . 0.1966 . . . . . . . . . . . 0.2197 'X-RAY DIFFRACTION' 1.19 1.20 . . 140 2779 95.83 . . . . 0.1732 . . . . . . . . . . . 0.2150 'X-RAY DIFFRACTION' 1.20 1.22 . . 143 2763 97.03 . . . . 0.1603 . . . . . . . . . . . 0.1807 'X-RAY DIFFRACTION' 1.22 1.23 . . 146 2846 98.13 . . . . 0.1538 . . . . . . . . . . . 0.1885 'X-RAY DIFFRACTION' 1.23 1.25 . . 142 2811 98.86 . . . . 0.1453 . . . . . . . . . . . 0.1909 'X-RAY DIFFRACTION' 1.25 1.27 . . 144 2888 99.48 . . . . 0.1384 . . . . . . . . . . . 0.1501 'X-RAY DIFFRACTION' 1.27 1.29 . . 138 2854 100.00 . . . . 0.1351 . . . . . . . . . . . 0.1781 'X-RAY DIFFRACTION' 1.29 1.31 . . 160 2887 100.00 . . . . 0.1342 . . . . . . . . . . . 0.1909 'X-RAY DIFFRACTION' 1.31 1.33 . . 155 2879 99.93 . . . . 0.1339 . . . . . . . . . . . 0.1697 'X-RAY DIFFRACTION' 1.33 1.35 . . 141 2865 99.90 . . . . 0.1329 . . . . . . . . . . . 0.1772 'X-RAY DIFFRACTION' 1.35 1.37 . . 131 2890 100.00 . . . . 0.1326 . . . . . . . . . . . 0.1620 'X-RAY DIFFRACTION' 1.37 1.40 . . 128 2912 99.97 . . . . 0.1282 . . . . . . . . . . . 0.1679 'X-RAY DIFFRACTION' 1.40 1.42 . . 129 2898 99.97 . . . . 0.1317 . . . . . . . . . . . 0.1660 'X-RAY DIFFRACTION' 1.42 1.45 . . 151 2889 100.00 . . . . 0.1291 . . . . . . . . . . . 0.1669 'X-RAY DIFFRACTION' 1.45 1.48 . . 137 2929 99.97 . . . . 0.1227 . . . . . . . . . . . 0.1954 'X-RAY DIFFRACTION' 1.48 1.52 . . 148 2855 99.97 . . . . 0.1193 . . . . . . . . . . . 0.1499 'X-RAY DIFFRACTION' 1.52 1.56 . . 130 2932 99.97 . . . . 0.1194 . . . . . . . . . . . 0.1553 'X-RAY DIFFRACTION' 1.56 1.60 . . 163 2876 99.87 . . . . 0.1214 . . . . . . . . . . . 0.1505 'X-RAY DIFFRACTION' 1.60 1.64 . . 163 2882 99.97 . . . . 0.1244 . . . . . . . . . . . 0.1814 'X-RAY DIFFRACTION' 1.64 1.70 . . 153 2913 99.97 . . . . 0.1281 . . . . . . . . . . . 0.1533 'X-RAY DIFFRACTION' 1.70 1.76 . . 179 2866 99.90 . . . . 0.1259 . . . . . . . . . . . 0.1816 'X-RAY DIFFRACTION' 1.76 1.83 . . 173 2868 99.84 . . . . 0.1252 . . . . . . . . . . . 0.1720 'X-RAY DIFFRACTION' 1.83 1.91 . . 153 2926 100.00 . . . . 0.1244 . . . . . . . . . . . 0.1424 'X-RAY DIFFRACTION' 1.91 2.01 . . 130 2947 99.97 . . . . 0.1197 . . . . . . . . . . . 0.1727 'X-RAY DIFFRACTION' 2.01 2.14 . . 190 2873 99.93 . . . . 0.1203 . . . . . . . . . . . 0.1393 'X-RAY DIFFRACTION' 2.14 2.30 . . 148 2962 99.94 . . . . 0.1281 . . . . . . . . . . . 0.1522 'X-RAY DIFFRACTION' 2.30 2.54 . . 185 2916 99.90 . . . . 0.1388 . . . . . . . . . . . 0.1523 'X-RAY DIFFRACTION' 2.54 2.90 . . 150 2964 99.94 . . . . 0.1498 . . . . . . . . . . . 0.1743 'X-RAY DIFFRACTION' 2.90 3.66 . . 154 3001 99.78 . . . . 0.1371 . . . . . . . . . . . 0.1727 'X-RAY DIFFRACTION' 3.66 33.18 . . 164 3155 99.91 . . . . 0.1701 . . . . . . . . . . . 0.2094 # _struct.entry_id 8I1G _struct.title 'Crystal structure of human MTH1(G2K mutant) in complex with 2-oxo-dATP at pH 9.1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8I1G _struct_keywords.text 'Nudix hydrolase, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 3 ? J N N 3 ? K N N 5 ? L N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 44 ? GLY A 58 ? THR A 44 GLY A 58 1 ? 15 HELX_P HELX_P2 AA2 PRO A 112 ? MET A 116 ? PRO A 112 MET A 116 5 ? 5 HELX_P HELX_P3 AA3 TRP A 117 ? PRO A 118 ? TRP A 117 PRO A 118 5 ? 2 HELX_P HELX_P4 AA4 ASP A 119 ? GLN A 129 ? ASP A 119 GLN A 129 1 ? 11 HELX_P HELX_P5 AA5 THR B 44 ? GLY B 58 ? THR B 44 GLY B 58 1 ? 15 HELX_P HELX_P6 AA6 PRO B 112 ? MET B 116 ? PRO B 112 MET B 116 5 ? 5 HELX_P HELX_P7 AA7 TRP B 117 ? PRO B 118 ? TRP B 117 PRO B 118 5 ? 2 HELX_P HELX_P8 AA8 ASP B 119 ? GLN B 129 ? ASP B 119 GLN B 129 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLY 36 O ? ? ? 1_555 F NA . NA A ? A GLY 36 A NA 204 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc2 metalc ? ? A ASP 119 OD1 ? ? ? 1_555 D NA . NA B ? A ASP 119 A NA 202 1_555 ? ? ? ? ? ? ? 3.043 ? ? metalc3 metalc ? ? A ASP 119 OD2 ? ? ? 1_555 D NA . NA B ? A ASP 119 A NA 202 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc4 metalc ? ? A ASP 120 OD1 ? ? ? 1_555 D NA . NA B ? A ASP 120 A NA 202 1_555 ? ? ? ? ? ? ? 2.298 ? ? metalc5 metalc ? ? C 6U4 . O2A A ? ? 1_555 F NA . NA A ? A 6U4 201 A NA 204 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc6 metalc ? ? D NA . NA B ? ? 1_555 E GOL . O3 B ? A NA 202 A GOL 203 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc7 metalc ? ? D NA . NA B ? ? 1_555 K HOH . O B ? A NA 202 A HOH 402 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc8 metalc ? ? D NA . NA B ? ? 1_555 K HOH . O B ? A NA 202 A HOH 432 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc9 metalc ? ? F NA . NA A ? ? 1_555 K HOH . O ? ? A NA 204 A HOH 362 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc10 metalc ? ? B GLY 36 O ? ? ? 1_555 J NA . NA ? ? B GLY 36 B NA 204 1_555 ? ? ? ? ? ? ? 2.497 ? ? metalc11 metalc ? ? B GLU 52 OE2 ? ? ? 1_555 I NA . NA ? ? B GLU 52 B NA 203 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc12 metalc ? ? B GLU 52 OE1 ? ? ? 1_555 J NA . NA ? ? B GLU 52 B NA 204 1_555 ? ? ? ? ? ? ? 2.534 ? ? metalc13 metalc ? ? B GLU 56 OE2 A ? ? 1_555 J NA . NA ? ? B GLU 56 B NA 204 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc14 metalc ? ? B ASP 119 OD1 ? ? ? 1_555 G NA . NA ? ? B ASP 119 B NA 201 1_555 ? ? ? ? ? ? ? 2.906 ? ? metalc15 metalc ? ? B ASP 119 OD2 ? ? ? 1_555 G NA . NA ? ? B ASP 119 B NA 201 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc16 metalc ? ? B ASP 120 OD1 ? ? ? 1_555 G NA . NA ? ? B ASP 120 B NA 201 1_555 ? ? ? ? ? ? ? 2.324 ? ? metalc17 metalc ? ? G NA . NA ? ? ? 1_555 H GOL . O3 ? ? B NA 201 B GOL 202 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc18 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O A ? B NA 201 B HOH 355 1_555 ? ? ? ? ? ? ? 2.170 ? ? metalc19 metalc ? ? G NA . NA ? ? ? 1_555 L HOH . O B ? B NA 201 B HOH 355 1_555 ? ? ? ? ? ? ? 2.359 ? ? metalc20 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 203 B HOH 350 1_555 ? ? ? ? ? ? ? 2.088 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? B NA 203 B HOH 398 1_555 ? ? ? ? ? ? ? 3.198 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 7 ? AA3 ? 4 ? AA4 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? parallel AA2 4 5 ? anti-parallel AA2 5 6 ? parallel AA2 6 7 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? parallel AA4 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TRP A 32 ? ASN A 33 ? TRP A 32 ASN A 33 AA1 2 ARG A 17 ? LYS A 23 ? ARG A 17 LYS A 23 AA1 3 MET A 101 ? GLN A 107 ? MET A 101 GLN A 107 AA2 1 TRP A 32 ? ASN A 33 ? TRP A 32 ASN A 33 AA2 2 ARG A 17 ? LYS A 23 ? ARG A 17 LYS A 23 AA2 3 SER A 4 ? LEU A 13 ? SER A 4 LEU A 13 AA2 4 LEU A 80 ? THR A 88 ? LEU A 80 THR A 88 AA2 5 HIS A 65 ? PHE A 74 ? HIS A 65 PHE A 74 AA2 6 LYS A 132 ? GLN A 140 ? LYS A 132 GLN A 140 AA2 7 THR A 144 ? VAL A 153 ? THR A 144 VAL A 153 AA3 1 TRP B 32 ? ASN B 33 ? TRP B 32 ASN B 33 AA3 2 ARG B 17 ? LYS B 23 ? ARG B 17 LYS B 23 AA3 3 SER B 4 ? LEU B 13 ? SER B 4 LEU B 13 AA3 4 MET B 101 ? GLN B 107 ? MET B 101 GLN B 107 AA4 1 PHE B 35 ? LYS B 38 ? PHE B 35 LYS B 38 AA4 2 SER B 4 ? LEU B 13 ? SER B 4 LEU B 13 AA4 3 ARG B 17 ? LYS B 23 ? ARG B 17 LYS B 23 AA4 4 LEU B 80 ? THR B 88 ? LEU B 80 THR B 88 AA4 5 HIS B 65 ? PHE B 74 ? HIS B 65 PHE B 74 AA4 6 PHE B 133 ? GLN B 140 ? PHE B 133 GLN B 140 AA4 7 THR B 144 ? GLU B 152 ? THR B 144 GLU B 152 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ASN A 33 ? O ASN A 33 N GLY A 21 ? N GLY A 21 AA1 2 3 N LEU A 20 ? N LEU A 20 O CYS A 104 ? O CYS A 104 AA2 1 2 O ASN A 33 ? O ASN A 33 N GLY A 21 ? N GLY A 21 AA2 2 3 O LEU A 19 ? O LEU A 19 N VAL A 12 ? N VAL A 12 AA2 3 4 N LEU A 9 ? N LEU A 9 O PHE A 86 ? O PHE A 86 AA2 4 5 O VAL A 83 ? O VAL A 83 N ILE A 70 ? N ILE A 70 AA2 5 6 N GLU A 73 ? N GLU A 73 O PHE A 139 ? O PHE A 139 AA2 6 7 N LYS A 138 ? N LYS A 138 O ASP A 147 ? O ASP A 147 AA3 1 2 O ASN B 33 ? O ASN B 33 N GLY B 21 ? N GLY B 21 AA3 2 3 O LEU B 19 ? O LEU B 19 N VAL B 12 ? N VAL B 12 AA4 1 2 O PHE B 35 ? O PHE B 35 N VAL B 10 ? N VAL B 10 AA4 2 3 N VAL B 12 ? N VAL B 12 O LEU B 19 ? O LEU B 19 AA4 4 5 O VAL B 83 ? O VAL B 83 N ILE B 70 ? N ILE B 70 AA4 5 6 N GLU B 73 ? N GLU B 73 O PHE B 139 ? O PHE B 139 AA4 6 7 N LYS B 138 ? N LYS B 138 O ASP B 147 ? O ASP B 147 # _atom_sites.entry_id 8I1G _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.021780 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020829 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008055 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? 25.62398 1.50364 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? 24.73122 6.32584 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? 19.97189 1.75589 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 6.63511 3.01293 1.30238 5.54423 0.54580 90.85902 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? 15.80542 1.70748 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? 1.42069 35.72801 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? 1.23737 29.19336 ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ALA 3 3 3 ALA ALA A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 MET 22 22 22 MET MET A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 ? ? ? A . n A 1 27 PHE 27 27 ? ? ? A . n A 1 28 GLY 28 28 ? ? ? A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 TRP 32 32 32 TRP TRP A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 PHE 74 74 74 PHE PHE A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 MET 81 81 81 MET MET A . n A 1 82 ASP 82 82 82 ASP ASP A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 CYS 87 87 87 CYS CYS A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 THR 94 94 94 THR THR A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 TRP 105 105 105 TRP TRP A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 GLN 110 110 110 GLN GLN A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 PHE 113 113 113 PHE PHE A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 ASP 115 115 115 ASP ASP A . n A 1 116 MET 116 116 116 MET MET A . n A 1 117 TRP 117 117 117 TRP TRP A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 ASP 120 120 120 ASP ASP A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 TYR 122 122 122 TYR TYR A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 PHE 124 124 124 PHE PHE A . n A 1 125 PRO 125 125 125 PRO PRO A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 LEU 128 128 128 LEU LEU A . n A 1 129 GLN 129 129 129 GLN GLN A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LYS 132 132 132 LYS LYS A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 TYR 136 136 136 TYR TYR A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 PHE 139 139 139 PHE PHE A . n A 1 140 GLN 140 140 140 GLN GLN A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ARG 151 151 151 ARG ARG A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 VAL 156 156 156 VAL VAL A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 LYS 2 2 2 LYS LYS B . n B 1 3 ALA 3 3 3 ALA ALA B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 TYR 7 7 7 TYR TYR B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 GLN 14 14 14 GLN GLN B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 GLN 16 16 16 GLN GLN B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 MET 22 22 22 MET MET B . n B 1 23 LYS 23 23 23 LYS LYS B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 PHE 27 27 27 PHE PHE B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 GLY 30 30 30 GLY GLY B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 TRP 32 32 32 TRP TRP B . n B 1 33 ASN 33 33 33 ASN ASN B . n B 1 34 GLY 34 34 34 GLY GLY B . n B 1 35 PHE 35 35 35 PHE PHE B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 GLY 37 37 37 GLY GLY B . n B 1 38 LYS 38 38 38 LYS LYS B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 THR 44 44 44 THR THR B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 GLU 46 46 46 GLU GLU B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 ALA 49 49 49 ALA ALA B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 ARG 51 51 51 ARG ARG B . n B 1 52 GLU 52 52 52 GLU GLU B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 GLN 54 54 54 GLN GLN B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 GLY 58 58 58 GLY GLY B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 THR 60 60 60 THR THR B . n B 1 61 VAL 61 61 61 VAL VAL B . n B 1 62 ASP 62 62 62 ASP ASP B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 HIS 65 65 65 HIS HIS B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 GLN 69 69 69 GLN GLN B . n B 1 70 ILE 70 70 70 ILE ILE B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 PHE 72 72 72 PHE PHE B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 PHE 74 74 74 PHE PHE B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 MET 81 81 81 MET MET B . n B 1 82 ASP 82 82 82 ASP ASP B . n B 1 83 VAL 83 83 83 VAL VAL B . n B 1 84 HIS 84 84 84 HIS HIS B . n B 1 85 VAL 85 85 85 VAL VAL B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 CYS 87 87 87 CYS CYS B . n B 1 88 THR 88 88 88 THR THR B . n B 1 89 ASP 89 89 89 ASP ASP B . n B 1 90 SER 90 90 90 SER SER B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 THR 94 94 94 THR THR B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 VAL 96 96 96 VAL VAL B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 SER 98 98 98 SER SER B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 GLU 100 100 100 GLU GLU B . n B 1 101 MET 101 101 101 MET MET B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 PRO 103 103 103 PRO PRO B . n B 1 104 CYS 104 104 104 CYS CYS B . n B 1 105 TRP 105 105 105 TRP TRP B . n B 1 106 PHE 106 106 106 PHE PHE B . n B 1 107 GLN 107 107 107 GLN GLN B . n B 1 108 LEU 108 108 108 LEU LEU B . n B 1 109 ASP 109 109 109 ASP ASP B . n B 1 110 GLN 110 110 110 GLN GLN B . n B 1 111 ILE 111 111 111 ILE ILE B . n B 1 112 PRO 112 112 112 PRO PRO B . n B 1 113 PHE 113 113 113 PHE PHE B . n B 1 114 LYS 114 114 114 LYS LYS B . n B 1 115 ASP 115 115 115 ASP ASP B . n B 1 116 MET 116 116 116 MET MET B . n B 1 117 TRP 117 117 117 TRP TRP B . n B 1 118 PRO 118 118 118 PRO PRO B . n B 1 119 ASP 119 119 119 ASP ASP B . n B 1 120 ASP 120 120 120 ASP ASP B . n B 1 121 SER 121 121 121 SER SER B . n B 1 122 TYR 122 122 122 TYR TYR B . n B 1 123 TRP 123 123 123 TRP TRP B . n B 1 124 PHE 124 124 124 PHE PHE B . n B 1 125 PRO 125 125 125 PRO PRO B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 LEU 127 127 127 LEU LEU B . n B 1 128 LEU 128 128 128 LEU LEU B . n B 1 129 GLN 129 129 129 GLN GLN B . n B 1 130 LYS 130 130 130 LYS LYS B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 LYS 132 132 132 LYS LYS B . n B 1 133 PHE 133 133 133 PHE PHE B . n B 1 134 HIS 134 134 134 HIS HIS B . n B 1 135 GLY 135 135 135 GLY GLY B . n B 1 136 TYR 136 136 136 TYR TYR B . n B 1 137 PHE 137 137 137 PHE PHE B . n B 1 138 LYS 138 138 138 LYS LYS B . n B 1 139 PHE 139 139 139 PHE PHE B . n B 1 140 GLN 140 140 140 GLN GLN B . n B 1 141 GLY 141 141 141 GLY GLY B . n B 1 142 GLN 142 142 142 GLN GLN B . n B 1 143 ASP 143 143 143 ASP ASP B . n B 1 144 THR 144 144 144 THR THR B . n B 1 145 ILE 145 145 145 ILE ILE B . n B 1 146 LEU 146 146 146 LEU LEU B . n B 1 147 ASP 147 147 147 ASP ASP B . n B 1 148 TYR 148 148 148 TYR TYR B . n B 1 149 THR 149 149 149 THR THR B . n B 1 150 LEU 150 150 150 LEU LEU B . n B 1 151 ARG 151 151 151 ARG ARG B . n B 1 152 GLU 152 152 152 GLU GLU B . n B 1 153 VAL 153 153 153 VAL VAL B . n B 1 154 ASP 154 154 154 ASP ASP B . n B 1 155 THR 155 155 155 THR THR B . n B 1 156 VAL 156 156 156 VAL VAL B . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email tnaka@gpo.kumamoto-u.ac.jp _pdbx_contact_author.name_first Teruya _pdbx_contact_author.name_last Nakamura _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2013-3057 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 6U4 1 201 201 6U4 6U4 A . D 3 NA 1 202 202 NA NA A . E 4 GOL 1 203 205 GOL GOL A . F 3 NA 1 204 207 NA NA A . G 3 NA 1 201 202 NA NA B . H 4 GOL 1 202 204 GOL GOL B . I 3 NA 1 203 1 NA NA B . J 3 NA 1 204 2 NA NA B . K 5 HOH 1 301 155 HOH HOH A . K 5 HOH 2 302 212 HOH HOH A . K 5 HOH 3 303 215 HOH HOH A . K 5 HOH 4 304 247 HOH HOH A . K 5 HOH 5 305 231 HOH HOH A . K 5 HOH 6 306 332 HOH HOH A . K 5 HOH 7 307 311 HOH HOH A . K 5 HOH 8 308 248 HOH HOH A . K 5 HOH 9 309 276 HOH HOH A . K 5 HOH 10 310 56 HOH HOH A . K 5 HOH 11 311 95 HOH HOH A . K 5 HOH 12 312 120 HOH HOH A . K 5 HOH 13 313 126 HOH HOH A . K 5 HOH 14 314 106 HOH HOH A . K 5 HOH 15 315 219 HOH HOH A . K 5 HOH 16 316 223 HOH HOH A . K 5 HOH 17 317 300 HOH HOH A . K 5 HOH 18 318 50 HOH HOH A . K 5 HOH 19 319 346 HOH HOH A . K 5 HOH 20 320 363 HOH HOH A . K 5 HOH 21 321 60 HOH HOH A . K 5 HOH 22 322 292 HOH HOH A . K 5 HOH 23 323 85 HOH HOH A . K 5 HOH 24 324 33 HOH HOH A . K 5 HOH 25 325 158 HOH HOH A . K 5 HOH 26 326 6 HOH HOH A . K 5 HOH 27 327 53 HOH HOH A . K 5 HOH 28 328 83 HOH HOH A . K 5 HOH 29 329 41 HOH HOH A . K 5 HOH 30 330 26 HOH HOH A . K 5 HOH 31 331 108 HOH HOH A . K 5 HOH 32 332 343 HOH HOH A . K 5 HOH 33 333 36 HOH HOH A . K 5 HOH 34 334 320 HOH HOH A . K 5 HOH 35 335 339 HOH HOH A . K 5 HOH 36 336 51 HOH HOH A . K 5 HOH 37 337 5 HOH HOH A . K 5 HOH 38 338 74 HOH HOH A . K 5 HOH 39 339 61 HOH HOH A . K 5 HOH 40 340 8 HOH HOH A . K 5 HOH 41 341 84 HOH HOH A . K 5 HOH 42 342 128 HOH HOH A . K 5 HOH 43 343 246 HOH HOH A . K 5 HOH 44 344 34 HOH HOH A . K 5 HOH 45 345 20 HOH HOH A . K 5 HOH 46 346 19 HOH HOH A . K 5 HOH 47 347 265 HOH HOH A . K 5 HOH 48 348 317 HOH HOH A . K 5 HOH 49 349 149 HOH HOH A . K 5 HOH 50 350 249 HOH HOH A . K 5 HOH 51 351 75 HOH HOH A . K 5 HOH 52 352 206 HOH HOH A . K 5 HOH 53 353 334 HOH HOH A . K 5 HOH 54 354 54 HOH HOH A . K 5 HOH 55 355 130 HOH HOH A . K 5 HOH 56 356 125 HOH HOH A . K 5 HOH 57 357 37 HOH HOH A . K 5 HOH 58 358 48 HOH HOH A . K 5 HOH 59 359 14 HOH HOH A . K 5 HOH 60 360 30 HOH HOH A . K 5 HOH 61 361 236 HOH HOH A . K 5 HOH 62 362 167 HOH HOH A . K 5 HOH 63 363 182 HOH HOH A . K 5 HOH 64 364 340 HOH HOH A . K 5 HOH 65 365 80 HOH HOH A . K 5 HOH 66 366 3 HOH HOH A . K 5 HOH 67 367 372 HOH HOH A . K 5 HOH 68 368 161 HOH HOH A . K 5 HOH 69 369 47 HOH HOH A . K 5 HOH 70 370 178 HOH HOH A . K 5 HOH 71 371 18 HOH HOH A . K 5 HOH 72 372 196 HOH HOH A . K 5 HOH 73 373 40 HOH HOH A . K 5 HOH 74 374 301 HOH HOH A . K 5 HOH 75 375 15 HOH HOH A . K 5 HOH 76 376 31 HOH HOH A . K 5 HOH 77 377 172 HOH HOH A . K 5 HOH 78 378 190 HOH HOH A . K 5 HOH 79 379 326 HOH HOH A . K 5 HOH 80 380 176 HOH HOH A . K 5 HOH 81 381 122 HOH HOH A . K 5 HOH 82 382 71 HOH HOH A . K 5 HOH 83 383 218 HOH HOH A . K 5 HOH 84 384 170 HOH HOH A . K 5 HOH 85 385 58 HOH HOH A . K 5 HOH 86 386 144 HOH HOH A . K 5 HOH 87 387 86 HOH HOH A . K 5 HOH 88 388 131 HOH HOH A . K 5 HOH 89 389 102 HOH HOH A . K 5 HOH 90 390 119 HOH HOH A . K 5 HOH 91 391 187 HOH HOH A . K 5 HOH 92 392 4 HOH HOH A . K 5 HOH 93 393 67 HOH HOH A . K 5 HOH 94 394 191 HOH HOH A . K 5 HOH 95 395 13 HOH HOH A . K 5 HOH 96 396 93 HOH HOH A . K 5 HOH 97 397 64 HOH HOH A . K 5 HOH 98 398 153 HOH HOH A . K 5 HOH 99 399 156 HOH HOH A . K 5 HOH 100 400 76 HOH HOH A . K 5 HOH 101 401 344 HOH HOH A . K 5 HOH 102 402 203 HOH HOH A . K 5 HOH 103 403 143 HOH HOH A . K 5 HOH 104 404 69 HOH HOH A . K 5 HOH 105 405 290 HOH HOH A . K 5 HOH 106 406 94 HOH HOH A . K 5 HOH 107 407 109 HOH HOH A . K 5 HOH 108 408 45 HOH HOH A . K 5 HOH 109 409 1 HOH HOH A . K 5 HOH 110 410 195 HOH HOH A . K 5 HOH 111 411 117 HOH HOH A . K 5 HOH 112 412 244 HOH HOH A . K 5 HOH 113 413 43 HOH HOH A . K 5 HOH 114 414 99 HOH HOH A . K 5 HOH 115 415 208 HOH HOH A . K 5 HOH 116 416 164 HOH HOH A . K 5 HOH 117 417 16 HOH HOH A . K 5 HOH 118 418 302 HOH HOH A . K 5 HOH 119 419 146 HOH HOH A . K 5 HOH 120 420 205 HOH HOH A . K 5 HOH 121 421 217 HOH HOH A . K 5 HOH 122 422 327 HOH HOH A . K 5 HOH 123 423 330 HOH HOH A . K 5 HOH 124 424 7 HOH HOH A . K 5 HOH 125 425 379 HOH HOH A . K 5 HOH 126 426 252 HOH HOH A . K 5 HOH 127 427 272 HOH HOH A . K 5 HOH 128 428 364 HOH HOH A . K 5 HOH 129 429 323 HOH HOH A . K 5 HOH 130 430 297 HOH HOH A . K 5 HOH 131 431 186 HOH HOH A . K 5 HOH 132 432 204 HOH HOH A . K 5 HOH 133 433 328 HOH HOH A . K 5 HOH 134 434 242 HOH HOH A . K 5 HOH 135 435 203 HOH HOH A . K 5 HOH 136 436 210 HOH HOH A . K 5 HOH 137 437 141 HOH HOH A . K 5 HOH 138 438 294 HOH HOH A . K 5 HOH 139 439 175 HOH HOH A . K 5 HOH 140 440 177 HOH HOH A . K 5 HOH 141 441 207 HOH HOH A . K 5 HOH 142 442 285 HOH HOH A . K 5 HOH 143 443 100 HOH HOH A . K 5 HOH 144 444 162 HOH HOH A . K 5 HOH 145 445 279 HOH HOH A . K 5 HOH 146 446 313 HOH HOH A . K 5 HOH 147 447 258 HOH HOH A . K 5 HOH 148 448 321 HOH HOH A . K 5 HOH 149 449 124 HOH HOH A . K 5 HOH 150 450 355 HOH HOH A . K 5 HOH 151 451 295 HOH HOH A . K 5 HOH 152 452 163 HOH HOH A . K 5 HOH 153 453 233 HOH HOH A . K 5 HOH 154 454 147 HOH HOH A . K 5 HOH 155 455 202 HOH HOH A . K 5 HOH 156 456 282 HOH HOH A . K 5 HOH 157 457 261 HOH HOH A . K 5 HOH 158 458 62 HOH HOH A . K 5 HOH 159 459 171 HOH HOH A . K 5 HOH 160 460 335 HOH HOH A . K 5 HOH 161 461 310 HOH HOH A . K 5 HOH 162 462 255 HOH HOH A . K 5 HOH 163 463 256 HOH HOH A . K 5 HOH 164 464 350 HOH HOH A . K 5 HOH 165 465 324 HOH HOH A . L 5 HOH 1 301 342 HOH HOH B . L 5 HOH 2 302 232 HOH HOH B . L 5 HOH 3 303 287 HOH HOH B . L 5 HOH 4 304 201 HOH HOH B . L 5 HOH 5 305 79 HOH HOH B . L 5 HOH 6 306 221 HOH HOH B . L 5 HOH 7 307 204 HOH HOH B . L 5 HOH 8 308 362 HOH HOH B . L 5 HOH 9 309 361 HOH HOH B . L 5 HOH 10 310 165 HOH HOH B . L 5 HOH 11 311 138 HOH HOH B . L 5 HOH 12 312 243 HOH HOH B . L 5 HOH 13 313 266 HOH HOH B . L 5 HOH 14 314 113 HOH HOH B . L 5 HOH 15 315 118 HOH HOH B . L 5 HOH 16 316 209 HOH HOH B . L 5 HOH 17 317 137 HOH HOH B . L 5 HOH 18 318 88 HOH HOH B . L 5 HOH 19 319 366 HOH HOH B . L 5 HOH 20 320 55 HOH HOH B . L 5 HOH 21 321 230 HOH HOH B . L 5 HOH 22 322 72 HOH HOH B . L 5 HOH 23 323 49 HOH HOH B . L 5 HOH 24 324 104 HOH HOH B . L 5 HOH 25 325 180 HOH HOH B . L 5 HOH 26 326 9 HOH HOH B . L 5 HOH 27 327 280 HOH HOH B . L 5 HOH 28 328 336 HOH HOH B . L 5 HOH 29 329 133 HOH HOH B . L 5 HOH 30 330 116 HOH HOH B . L 5 HOH 31 331 245 HOH HOH B . L 5 HOH 32 332 46 HOH HOH B . L 5 HOH 33 333 63 HOH HOH B . L 5 HOH 34 334 21 HOH HOH B . L 5 HOH 35 335 98 HOH HOH B . L 5 HOH 36 336 70 HOH HOH B . L 5 HOH 37 337 81 HOH HOH B . L 5 HOH 38 338 22 HOH HOH B . L 5 HOH 39 339 17 HOH HOH B . L 5 HOH 40 340 304 HOH HOH B . L 5 HOH 41 341 27 HOH HOH B . L 5 HOH 42 342 23 HOH HOH B . L 5 HOH 43 343 96 HOH HOH B . L 5 HOH 44 344 107 HOH HOH B . L 5 HOH 45 345 160 HOH HOH B . L 5 HOH 46 346 29 HOH HOH B . L 5 HOH 47 347 198 HOH HOH B . L 5 HOH 48 348 121 HOH HOH B . L 5 HOH 49 349 87 HOH HOH B . L 5 HOH 50 350 140 HOH HOH B . L 5 HOH 51 351 376 HOH HOH B . L 5 HOH 52 352 42 HOH HOH B . L 5 HOH 53 353 181 HOH HOH B . L 5 HOH 54 354 44 HOH HOH B . L 5 HOH 55 355 203 HOH HOH B . L 5 HOH 56 356 154 HOH HOH B . L 5 HOH 57 357 224 HOH HOH B . L 5 HOH 58 358 59 HOH HOH B . L 5 HOH 59 359 25 HOH HOH B . L 5 HOH 60 360 65 HOH HOH B . L 5 HOH 61 361 77 HOH HOH B . L 5 HOH 62 362 24 HOH HOH B . L 5 HOH 63 363 226 HOH HOH B . L 5 HOH 64 364 92 HOH HOH B . L 5 HOH 65 365 90 HOH HOH B . L 5 HOH 66 366 381 HOH HOH B . L 5 HOH 67 367 174 HOH HOH B . L 5 HOH 68 368 110 HOH HOH B . L 5 HOH 69 369 139 HOH HOH B . L 5 HOH 70 370 35 HOH HOH B . L 5 HOH 71 371 114 HOH HOH B . L 5 HOH 72 372 192 HOH HOH B . L 5 HOH 73 373 199 HOH HOH B . L 5 HOH 74 374 105 HOH HOH B . L 5 HOH 75 375 52 HOH HOH B . L 5 HOH 76 376 173 HOH HOH B . L 5 HOH 77 377 374 HOH HOH B . L 5 HOH 78 378 169 HOH HOH B . L 5 HOH 79 379 101 HOH HOH B . L 5 HOH 80 380 278 HOH HOH B . L 5 HOH 81 381 188 HOH HOH B . L 5 HOH 82 382 289 HOH HOH B . L 5 HOH 83 383 39 HOH HOH B . L 5 HOH 84 384 271 HOH HOH B . L 5 HOH 85 385 32 HOH HOH B . L 5 HOH 86 386 68 HOH HOH B . L 5 HOH 87 387 103 HOH HOH B . L 5 HOH 88 388 28 HOH HOH B . L 5 HOH 89 389 135 HOH HOH B . L 5 HOH 90 390 132 HOH HOH B . L 5 HOH 91 391 12 HOH HOH B . L 5 HOH 92 392 253 HOH HOH B . L 5 HOH 93 393 168 HOH HOH B . L 5 HOH 94 394 134 HOH HOH B . L 5 HOH 95 395 142 HOH HOH B . L 5 HOH 96 396 382 HOH HOH B . L 5 HOH 97 397 216 HOH HOH B . L 5 HOH 98 398 378 HOH HOH B . L 5 HOH 99 399 183 HOH HOH B . L 5 HOH 100 400 57 HOH HOH B . L 5 HOH 101 401 112 HOH HOH B . L 5 HOH 102 402 150 HOH HOH B . L 5 HOH 103 403 235 HOH HOH B . L 5 HOH 104 404 273 HOH HOH B . L 5 HOH 105 405 151 HOH HOH B . L 5 HOH 106 406 341 HOH HOH B . L 5 HOH 107 407 283 HOH HOH B . L 5 HOH 108 408 111 HOH HOH B . L 5 HOH 109 409 97 HOH HOH B . L 5 HOH 110 410 225 HOH HOH B . L 5 HOH 111 411 179 HOH HOH B . L 5 HOH 112 412 309 HOH HOH B . L 5 HOH 113 413 371 HOH HOH B . L 5 HOH 114 414 78 HOH HOH B . L 5 HOH 115 415 38 HOH HOH B . L 5 HOH 116 416 274 HOH HOH B . L 5 HOH 117 417 11 HOH HOH B . L 5 HOH 118 418 359 HOH HOH B . L 5 HOH 119 419 145 HOH HOH B . L 5 HOH 120 420 73 HOH HOH B . L 5 HOH 121 421 299 HOH HOH B . L 5 HOH 122 422 157 HOH HOH B . L 5 HOH 123 423 2 HOH HOH B . L 5 HOH 124 424 185 HOH HOH B . L 5 HOH 125 425 240 HOH HOH B . L 5 HOH 126 426 127 HOH HOH B . L 5 HOH 127 427 91 HOH HOH B . L 5 HOH 128 428 354 HOH HOH B . L 5 HOH 129 429 312 HOH HOH B . L 5 HOH 130 430 136 HOH HOH B . L 5 HOH 131 431 197 HOH HOH B . L 5 HOH 132 432 308 HOH HOH B . L 5 HOH 133 433 293 HOH HOH B . L 5 HOH 134 434 228 HOH HOH B . L 5 HOH 135 435 10 HOH HOH B . L 5 HOH 136 436 159 HOH HOH B . L 5 HOH 137 437 380 HOH HOH B . L 5 HOH 138 438 184 HOH HOH B . L 5 HOH 139 439 322 HOH HOH B . L 5 HOH 140 440 377 HOH HOH B . L 5 HOH 141 441 352 HOH HOH B . L 5 HOH 142 442 220 HOH HOH B . L 5 HOH 143 443 318 HOH HOH B . L 5 HOH 144 444 373 HOH HOH B . L 5 HOH 145 445 89 HOH HOH B . L 5 HOH 146 446 319 HOH HOH B . L 5 HOH 147 447 129 HOH HOH B . L 5 HOH 148 448 166 HOH HOH B . L 5 HOH 149 449 281 HOH HOH B . L 5 HOH 150 450 288 HOH HOH B . L 5 HOH 151 451 275 HOH HOH B . L 5 HOH 152 452 286 HOH HOH B . L 5 HOH 153 453 357 HOH HOH B . L 5 HOH 154 454 257 HOH HOH B . L 5 HOH 155 455 262 HOH HOH B . L 5 HOH 156 456 193 HOH HOH B . L 5 HOH 157 457 268 HOH HOH B . L 5 HOH 158 458 66 HOH HOH B . L 5 HOH 159 459 238 HOH HOH B . L 5 HOH 160 460 263 HOH HOH B . L 5 HOH 161 461 306 HOH HOH B . L 5 HOH 162 462 303 HOH HOH B . L 5 HOH 163 463 349 HOH HOH B . L 5 HOH 164 464 264 HOH HOH B . L 5 HOH 165 465 375 HOH HOH B . L 5 HOH 166 466 241 HOH HOH B . L 5 HOH 167 467 259 HOH HOH B . L 5 HOH 168 468 298 HOH HOH B . L 5 HOH 169 469 237 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,K 2 1 B,G,H,I,J,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 130 ? 1 MORE -11 ? 1 'SSA (A^2)' 8350 ? 2 'ABSA (A^2)' 120 ? 2 MORE -9 ? 2 'SSA (A^2)' 8620 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLY 36 ? A GLY 36 ? 1_555 NA A F NA . ? A NA 204 ? 1_555 O2A A C 6U4 . ? A 6U4 201 ? 1_555 116.0 ? 2 O ? A GLY 36 ? A GLY 36 ? 1_555 NA A F NA . ? A NA 204 ? 1_555 O ? K HOH . ? A HOH 362 ? 1_555 78.6 ? 3 O2A A C 6U4 . ? A 6U4 201 ? 1_555 NA A F NA . ? A NA 204 ? 1_555 O ? K HOH . ? A HOH 362 ? 1_555 101.7 ? 4 OD1 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 OD2 ? A ASP 119 ? A ASP 119 ? 1_555 46.1 ? 5 OD1 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 OD1 ? A ASP 120 ? A ASP 120 ? 1_555 90.2 ? 6 OD2 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 OD1 ? A ASP 120 ? A ASP 120 ? 1_555 83.9 ? 7 OD1 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O3 B E GOL . ? A GOL 203 ? 1_555 59.2 ? 8 OD2 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O3 B E GOL . ? A GOL 203 ? 1_555 92.8 ? 9 OD1 ? A ASP 120 ? A ASP 120 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O3 B E GOL . ? A GOL 203 ? 1_555 136.9 ? 10 OD1 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 402 ? 1_555 129.4 ? 11 OD2 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 402 ? 1_555 175.5 ? 12 OD1 ? A ASP 120 ? A ASP 120 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 402 ? 1_555 95.9 ? 13 O3 B E GOL . ? A GOL 203 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 402 ? 1_555 84.3 ? 14 OD1 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 432 ? 1_555 132.4 ? 15 OD2 ? A ASP 119 ? A ASP 119 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 432 ? 1_555 95.6 ? 16 OD1 ? A ASP 120 ? A ASP 120 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 432 ? 1_555 116.4 ? 17 O3 B E GOL . ? A GOL 203 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 432 ? 1_555 106.7 ? 18 O B K HOH . ? A HOH 402 ? 1_555 NA B D NA . ? A NA 202 ? 1_555 O B K HOH . ? A HOH 432 ? 1_555 88.6 ? 19 O ? B GLY 36 ? B GLY 36 ? 1_555 NA ? J NA . ? B NA 204 ? 1_555 OE1 ? B GLU 52 ? B GLU 52 ? 1_555 80.6 ? 20 O ? B GLY 36 ? B GLY 36 ? 1_555 NA ? J NA . ? B NA 204 ? 1_555 OE2 A B GLU 56 ? B GLU 56 ? 1_555 81.3 ? 21 OE1 ? B GLU 52 ? B GLU 52 ? 1_555 NA ? J NA . ? B NA 204 ? 1_555 OE2 A B GLU 56 ? B GLU 56 ? 1_555 108.6 ? 22 OE2 ? B GLU 52 ? B GLU 52 ? 1_555 NA ? I NA . ? B NA 203 ? 1_555 O ? L HOH . ? B HOH 350 ? 1_555 87.4 ? 23 OE2 ? B GLU 52 ? B GLU 52 ? 1_555 NA ? I NA . ? B NA 203 ? 1_555 O ? L HOH . ? B HOH 398 ? 1_555 103.6 ? 24 O ? L HOH . ? B HOH 350 ? 1_555 NA ? I NA . ? B NA 203 ? 1_555 O ? L HOH . ? B HOH 398 ? 1_555 97.3 ? 25 OD1 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 OD2 ? B ASP 119 ? B ASP 119 ? 1_555 49.2 ? 26 OD1 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 OD1 ? B ASP 120 ? B ASP 120 ? 1_555 88.7 ? 27 OD2 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 OD1 ? B ASP 120 ? B ASP 120 ? 1_555 84.0 ? 28 OD1 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O3 ? H GOL . ? B GOL 202 ? 1_555 57.8 ? 29 OD2 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O3 ? H GOL . ? B GOL 202 ? 1_555 92.4 ? 30 OD1 ? B ASP 120 ? B ASP 120 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O3 ? H GOL . ? B GOL 202 ? 1_555 135.6 ? 31 OD1 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O A L HOH . ? B HOH 355 ? 1_555 163.2 ? 32 OD2 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O A L HOH . ? B HOH 355 ? 1_555 132.8 ? 33 OD1 ? B ASP 120 ? B ASP 120 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O A L HOH . ? B HOH 355 ? 1_555 75.7 ? 34 O3 ? H GOL . ? B GOL 202 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O A L HOH . ? B HOH 355 ? 1_555 131.4 ? 35 OD1 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O B L HOH . ? B HOH 355 ? 1_555 128.5 ? 36 OD2 ? B ASP 119 ? B ASP 119 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O B L HOH . ? B HOH 355 ? 1_555 177.6 ? 37 OD1 ? B ASP 120 ? B ASP 120 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O B L HOH . ? B HOH 355 ? 1_555 95.5 ? 38 O3 ? H GOL . ? B GOL 202 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O B L HOH . ? B HOH 355 ? 1_555 86.2 ? 39 O A L HOH . ? B HOH 355 ? 1_555 NA ? G NA . ? B NA 201 ? 1_555 O B L HOH . ? B HOH 355 ? 1_555 49.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-03-22 2 'Structure model' 1 1 2023-07-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 8I1G _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 90 ? B -168.86 110.46 2 1 GLN A 92 ? A -147.86 33.54 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 465 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.85 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 26 ? A GLY 26 2 1 Y 1 A PHE 27 ? A PHE 27 3 1 Y 1 A GLY 28 ? A GLY 28 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan ? 1 'Ministry of Education, Culture, Sports, Science and Technology (Japan)' Japan ? 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id 6U4 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id 6U4 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;[[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate ; 6U4 3 'SODIUM ION' NA 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5GHJ _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 #