data_8I1M # _entry.id 8I1M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8I1M pdb_00008i1m 10.2210/pdb8i1m/pdb WWPDB D_1300034771 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8I1M _pdbx_database_status.recvd_initial_deposition_date 2023-01-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhang, L.' 1 ? 'Song, W.Y.' 2 ? 'Zhang, L.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 0969-2126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 31 _citation.language ? _citation.page_first 826 _citation.page_last 835.e3 _citation.title ;Redox switching mechanism of the adenosine 5'-phosphosulfate kinase domain (APSK2) of human PAPS synthase 2. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2023.04.012 _citation.pdbx_database_id_PubMed 37207644 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhang, L.' 1 ? primary 'Song, W.' 2 ? primary 'Li, T.' 3 ? primary 'Mu, Y.' 4 ? primary 'Zhang, P.' 5 ? primary 'Hu, J.' 6 ? primary 'Lin, H.' 7 ? primary 'Zhang, J.' 8 ? primary 'Gao, H.' 9 ? primary 'Zhang, L.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 91.94 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8I1M _cell.details ? _cell.formula_units_Z ? _cell.length_a 114.352 _cell.length_a_esd ? _cell.length_b 51.361 _cell.length_b_esd ? _cell.length_c 32.397 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8I1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PAPSS1 protein' 22460.309 1 ? ? 'APSK1 domain' ? 2 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-PHOSPHOSULFATE" 427.284 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 water nat water 18.015 156 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPE DREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKG FTGIDSDYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVP ; _entity_poly.pdbx_seq_one_letter_code_can ;ATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPE DREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKG FTGIDSDYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 THR n 1 3 ASN n 1 4 VAL n 1 5 THR n 1 6 TYR n 1 7 GLN n 1 8 ALA n 1 9 HIS n 1 10 HIS n 1 11 VAL n 1 12 SER n 1 13 ARG n 1 14 ASN n 1 15 LYS n 1 16 ARG n 1 17 GLY n 1 18 GLN n 1 19 VAL n 1 20 VAL n 1 21 GLY n 1 22 THR n 1 23 ARG n 1 24 GLY n 1 25 GLY n 1 26 PHE n 1 27 ARG n 1 28 GLY n 1 29 CYS n 1 30 THR n 1 31 VAL n 1 32 TRP n 1 33 LEU n 1 34 THR n 1 35 GLY n 1 36 LEU n 1 37 SER n 1 38 GLY n 1 39 ALA n 1 40 GLY n 1 41 LYS n 1 42 THR n 1 43 THR n 1 44 VAL n 1 45 SER n 1 46 MET n 1 47 ALA n 1 48 LEU n 1 49 GLU n 1 50 GLU n 1 51 TYR n 1 52 LEU n 1 53 VAL n 1 54 CYS n 1 55 HIS n 1 56 GLY n 1 57 ILE n 1 58 PRO n 1 59 CYS n 1 60 TYR n 1 61 THR n 1 62 LEU n 1 63 ASP n 1 64 GLY n 1 65 ASP n 1 66 ASN n 1 67 ILE n 1 68 ARG n 1 69 GLN n 1 70 GLY n 1 71 LEU n 1 72 ASN n 1 73 LYS n 1 74 ASN n 1 75 LEU n 1 76 GLY n 1 77 PHE n 1 78 SER n 1 79 PRO n 1 80 GLU n 1 81 ASP n 1 82 ARG n 1 83 GLU n 1 84 GLU n 1 85 ASN n 1 86 VAL n 1 87 ARG n 1 88 ARG n 1 89 ILE n 1 90 ALA n 1 91 GLU n 1 92 VAL n 1 93 ALA n 1 94 LYS n 1 95 LEU n 1 96 PHE n 1 97 ALA n 1 98 ASP n 1 99 ALA n 1 100 GLY n 1 101 LEU n 1 102 VAL n 1 103 CYS n 1 104 ILE n 1 105 THR n 1 106 SER n 1 107 PHE n 1 108 ILE n 1 109 SER n 1 110 PRO n 1 111 TYR n 1 112 THR n 1 113 GLN n 1 114 ASP n 1 115 ARG n 1 116 ASN n 1 117 ASN n 1 118 ALA n 1 119 ARG n 1 120 GLN n 1 121 ILE n 1 122 HIS n 1 123 GLU n 1 124 GLY n 1 125 ALA n 1 126 SER n 1 127 LEU n 1 128 PRO n 1 129 PHE n 1 130 PHE n 1 131 GLU n 1 132 VAL n 1 133 PHE n 1 134 VAL n 1 135 ASP n 1 136 ALA n 1 137 PRO n 1 138 LEU n 1 139 HIS n 1 140 VAL n 1 141 CYS n 1 142 GLU n 1 143 GLN n 1 144 ARG n 1 145 ASP n 1 146 VAL n 1 147 LYS n 1 148 GLY n 1 149 LEU n 1 150 TYR n 1 151 LYS n 1 152 LYS n 1 153 ALA n 1 154 ARG n 1 155 ALA n 1 156 GLY n 1 157 GLU n 1 158 ILE n 1 159 LYS n 1 160 GLY n 1 161 PHE n 1 162 THR n 1 163 GLY n 1 164 ILE n 1 165 ASP n 1 166 SER n 1 167 ASP n 1 168 TYR n 1 169 GLU n 1 170 LYS n 1 171 PRO n 1 172 GLU n 1 173 ALA n 1 174 PRO n 1 175 GLU n 1 176 LEU n 1 177 VAL n 1 178 LEU n 1 179 LYS n 1 180 THR n 1 181 ASP n 1 182 SER n 1 183 CYS n 1 184 ASP n 1 185 VAL n 1 186 ASN n 1 187 ASP n 1 188 CYS n 1 189 VAL n 1 190 GLN n 1 191 GLN n 1 192 VAL n 1 193 VAL n 1 194 GLU n 1 195 LEU n 1 196 LEU n 1 197 GLN n 1 198 GLU n 1 199 ARG n 1 200 ASP n 1 201 ILE n 1 202 VAL n 1 203 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 203 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PAPSS1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q05BW9_HUMAN _struct_ref.pdbx_db_accession Q05BW9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATNVTYQAHHVSRNKRGQVVGTRGGFRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPE DREENVRRIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKG FTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQERDIVP ; _struct_ref.pdbx_align_begin 25 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8I1M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 203 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q05BW9 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 227 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 227 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 8I1M _struct_ref_seq_dif.mon_id ASP _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 167 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q05BW9 _struct_ref_seq_dif.db_mon_id GLU _struct_ref_seq_dif.pdbx_seq_db_seq_num 191 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 191 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ADX 'RNA linking' . "ADENOSINE-5'-PHOSPHOSULFATE" ? 'C10 H14 N5 O10 P S' 427.284 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8I1M _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.80 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.0 M Ammonium sulfate, 0.1 M HEPES, pH7.5 and 2% w/v PEG4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-01-18 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9785 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9785 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8I1M _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.699 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18780 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 90.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.029 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 1.004 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.70 1.76 ? ? ? ? ? ? 1149 ? ? ? ? ? ? ? ? ? ? ? 4.2 0.946 ? ? ? ? ? 1 1 ? ? ? 56.7 ? 0.462 ? ? ? ? ? ? ? ? ? 1.76 1.83 ? ? ? ? ? ? 1430 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.010 ? ? ? ? ? 2 1 ? ? ? 68.4 ? 0.384 ? ? ? ? ? ? ? ? ? 1.83 1.91 ? ? ? ? ? ? 1786 ? ? ? ? ? ? ? ? ? ? ? 5.2 0.995 ? ? ? ? ? 3 1 ? ? ? 86.4 ? 0.427 ? ? ? ? ? ? ? ? ? 1.91 2.02 ? ? ? ? ? ? 2000 ? ? ? ? ? ? ? ? ? ? ? 5.5 0.976 ? ? ? ? ? 4 1 ? ? ? 96.9 ? 0.330 ? ? ? ? ? ? ? ? ? 2.02 2.14 ? ? ? ? ? ? 2024 ? ? ? ? ? ? ? ? ? ? ? 5.9 1.002 ? ? ? ? ? 5 1 ? ? ? 98.3 ? 0.241 ? ? ? ? ? ? ? ? ? 2.14 2.31 ? ? ? ? ? ? 2066 ? ? ? ? ? ? ? ? ? ? ? 6.3 1.020 ? ? ? ? ? 6 1 ? ? ? 98.8 ? 0.178 ? ? ? ? ? ? ? ? ? 2.31 2.54 ? ? ? ? ? ? 2069 ? ? ? ? ? ? ? ? ? ? ? 6.8 1.009 ? ? ? ? ? 7 1 ? ? ? 99.5 ? 0.130 ? ? ? ? ? ? ? ? ? 2.54 2.91 ? ? ? ? ? ? 2050 ? ? ? ? ? ? ? ? ? ? ? 6.4 1.003 ? ? ? ? ? 8 1 ? ? ? 98.4 ? 0.085 ? ? ? ? ? ? ? ? ? 2.91 3.66 ? ? ? ? ? ? 2098 ? ? ? ? ? ? ? ? ? ? ? 6.9 0.923 ? ? ? ? ? 9 1 ? ? ? 99.8 ? 0.049 ? ? ? ? ? ? ? ? ? 3.66 50.00 ? ? ? ? ? ? 2108 ? ? ? ? ? ? ? ? ? ? ? 6.5 1.612 ? ? ? ? ? 10 1 ? ? ? 98.7 ? 0.036 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8I1M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.699 _refine.ls_d_res_low 46.848 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15998 _refine.ls_number_reflns_R_free 815 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 77.01 _refine.ls_percent_reflns_R_free 5.09 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1847 _refine.ls_R_factor_R_free 0.2299 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1823 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2OFX _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.60 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.20 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.699 _refine_hist.d_res_low 46.848 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1710 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1495 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 59 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 ? 1587 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.035 ? 2159 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 18.377 ? 962 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.054 ? 237 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 ? 277 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.6995 1.8060 . . 66 1043 33.00 . . . . 0.2255 . . . . . . . . . . . 0.3337 'X-RAY DIFFRACTION' 1.8060 1.9454 . . 113 1816 56.00 . . . . 0.2155 . . . . . . . . . . . 0.2913 'X-RAY DIFFRACTION' 1.9454 2.1412 . . 123 2572 78.00 . . . . 0.2016 . . . . . . . . . . . 0.2702 'X-RAY DIFFRACTION' 2.1412 2.4510 . . 183 3143 96.00 . . . . 0.1908 . . . . . . . . . . . 0.2628 'X-RAY DIFFRACTION' 2.4510 3.0879 . . 159 3278 99.00 . . . . 0.1892 . . . . . . . . . . . 0.2334 'X-RAY DIFFRACTION' 3.0879 46.848 . . 171 3331 99.00 . . . . 0.1616 . . . . . . . . . . . 0.1850 # _struct.entry_id 8I1M _struct.title 'Crystal structure of oxidated APSK1 domain from human PAPSS1 in complex with APS and ADP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8I1M _struct_keywords.text ;5'-phosphosulfate kinase 1, APSK1, human PAPSS1, BIOSYNTHETIC PROTEIN ; _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 12 ? VAL A 20 ? SER A 36 VAL A 44 1 ? 9 HELX_P HELX_P2 AA2 GLY A 40 ? HIS A 55 ? GLY A 64 HIS A 79 1 ? 16 HELX_P HELX_P3 AA3 GLY A 64 ? ARG A 68 ? GLY A 88 ARG A 92 1 ? 5 HELX_P HELX_P4 AA4 SER A 78 ? ALA A 99 ? SER A 102 ALA A 123 1 ? 22 HELX_P HELX_P5 AA5 TYR A 111 ? ALA A 125 ? TYR A 135 ALA A 149 1 ? 15 HELX_P HELX_P6 AA6 PRO A 137 ? ASP A 145 ? PRO A 161 ASP A 169 1 ? 9 HELX_P HELX_P7 AA7 GLY A 148 ? ALA A 155 ? GLY A 172 ALA A 179 1 ? 8 HELX_P HELX_P8 AA8 ASP A 184 ? ARG A 199 ? ASP A 208 ARG A 223 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 183 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 188 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 207 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 212 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.039 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 CYS A 59 ? ASP A 63 ? CYS A 83 ASP A 87 AA1 2 VAL A 102 ? SER A 106 ? VAL A 126 SER A 130 AA1 3 CYS A 29 ? THR A 34 ? CYS A 53 THR A 58 AA1 4 PHE A 129 ? VAL A 134 ? PHE A 153 VAL A 158 AA1 5 LEU A 176 ? LEU A 178 ? LEU A 200 LEU A 202 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 62 ? N LEU A 86 O ILE A 104 ? O ILE A 128 AA1 2 3 O CYS A 103 ? O CYS A 127 N CYS A 29 ? N CYS A 53 AA1 3 4 N TRP A 32 ? N TRP A 56 O VAL A 132 ? O VAL A 156 AA1 4 5 N PHE A 133 ? N PHE A 157 O LEU A 178 ? O LEU A 202 # _atom_sites.entry_id 8I1M _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008745 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000295 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019470 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030885 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 ;ADX A 302 HAS WRONG CHIRALITY AT ATOM C2' ; 2 ;ADX A 302 HAS WRONG CHIRALITY AT ATOM C1' ; # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 25 ? ? ? A . n A 1 2 THR 2 26 ? ? ? A . n A 1 3 ASN 3 27 ? ? ? A . n A 1 4 VAL 4 28 ? ? ? A . n A 1 5 THR 5 29 ? ? ? A . n A 1 6 TYR 6 30 ? ? ? A . n A 1 7 GLN 7 31 ? ? ? A . n A 1 8 ALA 8 32 ? ? ? A . n A 1 9 HIS 9 33 ? ? ? A . n A 1 10 HIS 10 34 ? ? ? A . n A 1 11 VAL 11 35 35 VAL VAL A . n A 1 12 SER 12 36 36 SER SER A . n A 1 13 ARG 13 37 37 ARG ARG A . n A 1 14 ASN 14 38 38 ASN ASN A . n A 1 15 LYS 15 39 39 LYS LYS A . n A 1 16 ARG 16 40 40 ARG ARG A . n A 1 17 GLY 17 41 41 GLY GLY A . n A 1 18 GLN 18 42 42 GLN GLN A . n A 1 19 VAL 19 43 43 VAL VAL A . n A 1 20 VAL 20 44 44 VAL VAL A . n A 1 21 GLY 21 45 45 GLY GLY A . n A 1 22 THR 22 46 46 THR THR A . n A 1 23 ARG 23 47 47 ARG ARG A . n A 1 24 GLY 24 48 48 GLY GLY A . n A 1 25 GLY 25 49 49 GLY GLY A . n A 1 26 PHE 26 50 50 PHE PHE A . n A 1 27 ARG 27 51 51 ARG ARG A . n A 1 28 GLY 28 52 52 GLY GLY A . n A 1 29 CYS 29 53 53 CYS CYS A . n A 1 30 THR 30 54 54 THR THR A . n A 1 31 VAL 31 55 55 VAL VAL A . n A 1 32 TRP 32 56 56 TRP TRP A . n A 1 33 LEU 33 57 57 LEU LEU A . n A 1 34 THR 34 58 58 THR THR A . n A 1 35 GLY 35 59 59 GLY GLY A . n A 1 36 LEU 36 60 60 LEU LEU A . n A 1 37 SER 37 61 61 SER SER A . n A 1 38 GLY 38 62 62 GLY GLY A . n A 1 39 ALA 39 63 63 ALA ALA A . n A 1 40 GLY 40 64 64 GLY GLY A . n A 1 41 LYS 41 65 65 LYS LYS A . n A 1 42 THR 42 66 66 THR THR A . n A 1 43 THR 43 67 67 THR THR A . n A 1 44 VAL 44 68 68 VAL VAL A . n A 1 45 SER 45 69 69 SER SER A . n A 1 46 MET 46 70 70 MET MET A . n A 1 47 ALA 47 71 71 ALA ALA A . n A 1 48 LEU 48 72 72 LEU LEU A . n A 1 49 GLU 49 73 73 GLU GLU A . n A 1 50 GLU 50 74 74 GLU GLU A . n A 1 51 TYR 51 75 75 TYR TYR A . n A 1 52 LEU 52 76 76 LEU LEU A . n A 1 53 VAL 53 77 77 VAL VAL A . n A 1 54 CYS 54 78 78 CYS CYS A . n A 1 55 HIS 55 79 79 HIS HIS A . n A 1 56 GLY 56 80 80 GLY GLY A . n A 1 57 ILE 57 81 81 ILE ILE A . n A 1 58 PRO 58 82 82 PRO PRO A . n A 1 59 CYS 59 83 83 CYS CYS A . n A 1 60 TYR 60 84 84 TYR TYR A . n A 1 61 THR 61 85 85 THR THR A . n A 1 62 LEU 62 86 86 LEU LEU A . n A 1 63 ASP 63 87 87 ASP ASP A . n A 1 64 GLY 64 88 88 GLY GLY A . n A 1 65 ASP 65 89 89 ASP ASP A . n A 1 66 ASN 66 90 90 ASN ASN A . n A 1 67 ILE 67 91 91 ILE ILE A . n A 1 68 ARG 68 92 92 ARG ARG A . n A 1 69 GLN 69 93 93 GLN GLN A . n A 1 70 GLY 70 94 94 GLY GLY A . n A 1 71 LEU 71 95 95 LEU LEU A . n A 1 72 ASN 72 96 96 ASN ASN A . n A 1 73 LYS 73 97 97 LYS LYS A . n A 1 74 ASN 74 98 98 ASN ASN A . n A 1 75 LEU 75 99 99 LEU LEU A . n A 1 76 GLY 76 100 100 GLY GLY A . n A 1 77 PHE 77 101 101 PHE PHE A . n A 1 78 SER 78 102 102 SER SER A . n A 1 79 PRO 79 103 103 PRO PRO A . n A 1 80 GLU 80 104 104 GLU GLU A . n A 1 81 ASP 81 105 105 ASP ASP A . n A 1 82 ARG 82 106 106 ARG ARG A . n A 1 83 GLU 83 107 107 GLU GLU A . n A 1 84 GLU 84 108 108 GLU GLU A . n A 1 85 ASN 85 109 109 ASN ASN A . n A 1 86 VAL 86 110 110 VAL VAL A . n A 1 87 ARG 87 111 111 ARG ARG A . n A 1 88 ARG 88 112 112 ARG ARG A . n A 1 89 ILE 89 113 113 ILE ILE A . n A 1 90 ALA 90 114 114 ALA ALA A . n A 1 91 GLU 91 115 115 GLU GLU A . n A 1 92 VAL 92 116 116 VAL VAL A . n A 1 93 ALA 93 117 117 ALA ALA A . n A 1 94 LYS 94 118 118 LYS LYS A . n A 1 95 LEU 95 119 119 LEU LEU A . n A 1 96 PHE 96 120 120 PHE PHE A . n A 1 97 ALA 97 121 121 ALA ALA A . n A 1 98 ASP 98 122 122 ASP ASP A . n A 1 99 ALA 99 123 123 ALA ALA A . n A 1 100 GLY 100 124 124 GLY GLY A . n A 1 101 LEU 101 125 125 LEU LEU A . n A 1 102 VAL 102 126 126 VAL VAL A . n A 1 103 CYS 103 127 127 CYS CYS A . n A 1 104 ILE 104 128 128 ILE ILE A . n A 1 105 THR 105 129 129 THR THR A . n A 1 106 SER 106 130 130 SER SER A . n A 1 107 PHE 107 131 131 PHE PHE A . n A 1 108 ILE 108 132 132 ILE ILE A . n A 1 109 SER 109 133 133 SER SER A . n A 1 110 PRO 110 134 134 PRO PRO A . n A 1 111 TYR 111 135 135 TYR TYR A . n A 1 112 THR 112 136 136 THR THR A . n A 1 113 GLN 113 137 137 GLN GLN A . n A 1 114 ASP 114 138 138 ASP ASP A . n A 1 115 ARG 115 139 139 ARG ARG A . n A 1 116 ASN 116 140 140 ASN ASN A . n A 1 117 ASN 117 141 141 ASN ASN A . n A 1 118 ALA 118 142 142 ALA ALA A . n A 1 119 ARG 119 143 143 ARG ARG A . n A 1 120 GLN 120 144 144 GLN GLN A . n A 1 121 ILE 121 145 145 ILE ILE A . n A 1 122 HIS 122 146 146 HIS HIS A . n A 1 123 GLU 123 147 147 GLU GLU A . n A 1 124 GLY 124 148 148 GLY GLY A . n A 1 125 ALA 125 149 149 ALA ALA A . n A 1 126 SER 126 150 150 SER SER A . n A 1 127 LEU 127 151 151 LEU LEU A . n A 1 128 PRO 128 152 152 PRO PRO A . n A 1 129 PHE 129 153 153 PHE PHE A . n A 1 130 PHE 130 154 154 PHE PHE A . n A 1 131 GLU 131 155 155 GLU GLU A . n A 1 132 VAL 132 156 156 VAL VAL A . n A 1 133 PHE 133 157 157 PHE PHE A . n A 1 134 VAL 134 158 158 VAL VAL A . n A 1 135 ASP 135 159 159 ASP ASP A . n A 1 136 ALA 136 160 160 ALA ALA A . n A 1 137 PRO 137 161 161 PRO PRO A . n A 1 138 LEU 138 162 162 LEU LEU A . n A 1 139 HIS 139 163 163 HIS HIS A . n A 1 140 VAL 140 164 164 VAL VAL A . n A 1 141 CYS 141 165 165 CYS CYS A . n A 1 142 GLU 142 166 166 GLU GLU A . n A 1 143 GLN 143 167 167 GLN GLN A . n A 1 144 ARG 144 168 168 ARG ARG A . n A 1 145 ASP 145 169 169 ASP ASP A . n A 1 146 VAL 146 170 170 VAL VAL A . n A 1 147 LYS 147 171 171 LYS LYS A . n A 1 148 GLY 148 172 172 GLY GLY A . n A 1 149 LEU 149 173 173 LEU LEU A . n A 1 150 TYR 150 174 174 TYR TYR A . n A 1 151 LYS 151 175 175 LYS LYS A . n A 1 152 LYS 152 176 176 LYS LYS A . n A 1 153 ALA 153 177 177 ALA ALA A . n A 1 154 ARG 154 178 178 ARG ARG A . n A 1 155 ALA 155 179 179 ALA ALA A . n A 1 156 GLY 156 180 180 GLY GLY A . n A 1 157 GLU 157 181 181 GLU GLU A . n A 1 158 ILE 158 182 182 ILE ILE A . n A 1 159 LYS 159 183 183 LYS LYS A . n A 1 160 GLY 160 184 184 GLY GLY A . n A 1 161 PHE 161 185 185 PHE PHE A . n A 1 162 THR 162 186 186 THR THR A . n A 1 163 GLY 163 187 187 GLY GLY A . n A 1 164 ILE 164 188 188 ILE ILE A . n A 1 165 ASP 165 189 189 ASP ASP A . n A 1 166 SER 166 190 190 SER SER A . n A 1 167 ASP 167 191 191 ASP ASP A . n A 1 168 TYR 168 192 192 TYR TYR A . n A 1 169 GLU 169 193 193 GLU GLU A . n A 1 170 LYS 170 194 194 LYS LYS A . n A 1 171 PRO 171 195 195 PRO PRO A . n A 1 172 GLU 172 196 196 GLU GLU A . n A 1 173 ALA 173 197 197 ALA ALA A . n A 1 174 PRO 174 198 198 PRO PRO A . n A 1 175 GLU 175 199 199 GLU GLU A . n A 1 176 LEU 176 200 200 LEU LEU A . n A 1 177 VAL 177 201 201 VAL VAL A . n A 1 178 LEU 178 202 202 LEU LEU A . n A 1 179 LYS 179 203 203 LYS LYS A . n A 1 180 THR 180 204 204 THR THR A . n A 1 181 ASP 181 205 205 ASP ASP A . n A 1 182 SER 182 206 206 SER SER A . n A 1 183 CYS 183 207 207 CYS CYS A . n A 1 184 ASP 184 208 208 ASP ASP A . n A 1 185 VAL 185 209 209 VAL VAL A . n A 1 186 ASN 186 210 210 ASN ASN A . n A 1 187 ASP 187 211 211 ASP ASP A . n A 1 188 CYS 188 212 212 CYS CYS A . n A 1 189 VAL 189 213 213 VAL VAL A . n A 1 190 GLN 190 214 214 GLN GLN A . n A 1 191 GLN 191 215 215 GLN GLN A . n A 1 192 VAL 192 216 216 VAL VAL A . n A 1 193 VAL 193 217 217 VAL VAL A . n A 1 194 GLU 194 218 218 GLU GLU A . n A 1 195 LEU 195 219 219 LEU LEU A . n A 1 196 LEU 196 220 220 LEU LEU A . n A 1 197 GLN 197 221 221 GLN GLN A . n A 1 198 GLU 198 222 222 GLU GLU A . n A 1 199 ARG 199 223 223 ARG ARG A . n A 1 200 ASP 200 224 224 ASP ASP A . n A 1 201 ILE 201 225 225 ILE ILE A . n A 1 202 VAL 202 226 226 VAL VAL A . n A 1 203 PRO 203 227 227 PRO PRO A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email liangzhang2014@sjtu.edu.cn _pdbx_contact_author.name_first Liang _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7672-1168 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP 1 301 301 ADP ADP A . C 3 ADX 1 302 302 ADX ADX A . D 4 PO4 1 303 303 PO4 PO4 A . E 5 HOH 1 401 109 HOH HOH A . E 5 HOH 2 402 41 HOH HOH A . E 5 HOH 3 403 91 HOH HOH A . E 5 HOH 4 404 99 HOH HOH A . E 5 HOH 5 405 35 HOH HOH A . E 5 HOH 6 406 9 HOH HOH A . E 5 HOH 7 407 4 HOH HOH A . E 5 HOH 8 408 30 HOH HOH A . E 5 HOH 9 409 65 HOH HOH A . E 5 HOH 10 410 131 HOH HOH A . E 5 HOH 11 411 10 HOH HOH A . E 5 HOH 12 412 29 HOH HOH A . E 5 HOH 13 413 143 HOH HOH A . E 5 HOH 14 414 31 HOH HOH A . E 5 HOH 15 415 1 HOH HOH A . E 5 HOH 16 416 43 HOH HOH A . E 5 HOH 17 417 37 HOH HOH A . E 5 HOH 18 418 22 HOH HOH A . E 5 HOH 19 419 148 HOH HOH A . E 5 HOH 20 420 33 HOH HOH A . E 5 HOH 21 421 38 HOH HOH A . E 5 HOH 22 422 70 HOH HOH A . E 5 HOH 23 423 2 HOH HOH A . E 5 HOH 24 424 19 HOH HOH A . E 5 HOH 25 425 74 HOH HOH A . E 5 HOH 26 426 119 HOH HOH A . E 5 HOH 27 427 24 HOH HOH A . E 5 HOH 28 428 87 HOH HOH A . E 5 HOH 29 429 8 HOH HOH A . E 5 HOH 30 430 67 HOH HOH A . E 5 HOH 31 431 102 HOH HOH A . E 5 HOH 32 432 5 HOH HOH A . E 5 HOH 33 433 49 HOH HOH A . E 5 HOH 34 434 12 HOH HOH A . E 5 HOH 35 435 20 HOH HOH A . E 5 HOH 36 436 81 HOH HOH A . E 5 HOH 37 437 3 HOH HOH A . E 5 HOH 38 438 61 HOH HOH A . E 5 HOH 39 439 13 HOH HOH A . E 5 HOH 40 440 11 HOH HOH A . E 5 HOH 41 441 23 HOH HOH A . E 5 HOH 42 442 147 HOH HOH A . E 5 HOH 43 443 14 HOH HOH A . E 5 HOH 44 444 27 HOH HOH A . E 5 HOH 45 445 93 HOH HOH A . E 5 HOH 46 446 51 HOH HOH A . E 5 HOH 47 447 151 HOH HOH A . E 5 HOH 48 448 132 HOH HOH A . E 5 HOH 49 449 152 HOH HOH A . E 5 HOH 50 450 137 HOH HOH A . E 5 HOH 51 451 47 HOH HOH A . E 5 HOH 52 452 159 HOH HOH A . E 5 HOH 53 453 25 HOH HOH A . E 5 HOH 54 454 53 HOH HOH A . E 5 HOH 55 455 88 HOH HOH A . E 5 HOH 56 456 101 HOH HOH A . E 5 HOH 57 457 32 HOH HOH A . E 5 HOH 58 458 121 HOH HOH A . E 5 HOH 59 459 42 HOH HOH A . E 5 HOH 60 460 160 HOH HOH A . E 5 HOH 61 461 108 HOH HOH A . E 5 HOH 62 462 59 HOH HOH A . E 5 HOH 63 463 89 HOH HOH A . E 5 HOH 64 464 96 HOH HOH A . E 5 HOH 65 465 86 HOH HOH A . E 5 HOH 66 466 34 HOH HOH A . E 5 HOH 67 467 26 HOH HOH A . E 5 HOH 68 468 149 HOH HOH A . E 5 HOH 69 469 44 HOH HOH A . E 5 HOH 70 470 122 HOH HOH A . E 5 HOH 71 471 71 HOH HOH A . E 5 HOH 72 472 6 HOH HOH A . E 5 HOH 73 473 21 HOH HOH A . E 5 HOH 74 474 154 HOH HOH A . E 5 HOH 75 475 105 HOH HOH A . E 5 HOH 76 476 58 HOH HOH A . E 5 HOH 77 477 92 HOH HOH A . E 5 HOH 78 478 48 HOH HOH A . E 5 HOH 79 479 39 HOH HOH A . E 5 HOH 80 480 62 HOH HOH A . E 5 HOH 81 481 117 HOH HOH A . E 5 HOH 82 482 77 HOH HOH A . E 5 HOH 83 483 16 HOH HOH A . E 5 HOH 84 484 52 HOH HOH A . E 5 HOH 85 485 17 HOH HOH A . E 5 HOH 86 486 60 HOH HOH A . E 5 HOH 87 487 126 HOH HOH A . E 5 HOH 88 488 113 HOH HOH A . E 5 HOH 89 489 75 HOH HOH A . E 5 HOH 90 490 120 HOH HOH A . E 5 HOH 91 491 128 HOH HOH A . E 5 HOH 92 492 36 HOH HOH A . E 5 HOH 93 493 18 HOH HOH A . E 5 HOH 94 494 15 HOH HOH A . E 5 HOH 95 495 72 HOH HOH A . E 5 HOH 96 496 73 HOH HOH A . E 5 HOH 97 497 50 HOH HOH A . E 5 HOH 98 498 84 HOH HOH A . E 5 HOH 99 499 100 HOH HOH A . E 5 HOH 100 500 7 HOH HOH A . E 5 HOH 101 501 45 HOH HOH A . E 5 HOH 102 502 98 HOH HOH A . E 5 HOH 103 503 82 HOH HOH A . E 5 HOH 104 504 54 HOH HOH A . E 5 HOH 105 505 146 HOH HOH A . E 5 HOH 106 506 57 HOH HOH A . E 5 HOH 107 507 40 HOH HOH A . E 5 HOH 108 508 97 HOH HOH A . E 5 HOH 109 509 111 HOH HOH A . E 5 HOH 110 510 28 HOH HOH A . E 5 HOH 111 511 95 HOH HOH A . E 5 HOH 112 512 46 HOH HOH A . E 5 HOH 113 513 138 HOH HOH A . E 5 HOH 114 514 107 HOH HOH A . E 5 HOH 115 515 129 HOH HOH A . E 5 HOH 116 516 135 HOH HOH A . E 5 HOH 117 517 80 HOH HOH A . E 5 HOH 118 518 124 HOH HOH A . E 5 HOH 119 519 118 HOH HOH A . E 5 HOH 120 520 106 HOH HOH A . E 5 HOH 121 521 104 HOH HOH A . E 5 HOH 122 522 156 HOH HOH A . E 5 HOH 123 523 69 HOH HOH A . E 5 HOH 124 524 145 HOH HOH A . E 5 HOH 125 525 85 HOH HOH A . E 5 HOH 126 526 76 HOH HOH A . E 5 HOH 127 527 127 HOH HOH A . E 5 HOH 128 528 112 HOH HOH A . E 5 HOH 129 529 103 HOH HOH A . E 5 HOH 130 530 153 HOH HOH A . E 5 HOH 131 531 110 HOH HOH A . E 5 HOH 132 532 83 HOH HOH A . E 5 HOH 133 533 56 HOH HOH A . E 5 HOH 134 534 114 HOH HOH A . E 5 HOH 135 535 66 HOH HOH A . E 5 HOH 136 536 123 HOH HOH A . E 5 HOH 137 537 130 HOH HOH A . E 5 HOH 138 538 134 HOH HOH A . E 5 HOH 139 539 139 HOH HOH A . E 5 HOH 140 540 140 HOH HOH A . E 5 HOH 141 541 155 HOH HOH A . E 5 HOH 142 542 78 HOH HOH A . E 5 HOH 143 543 136 HOH HOH A . E 5 HOH 144 544 144 HOH HOH A . E 5 HOH 145 545 116 HOH HOH A . E 5 HOH 146 546 133 HOH HOH A . E 5 HOH 147 547 150 HOH HOH A . E 5 HOH 148 548 68 HOH HOH A . E 5 HOH 149 549 158 HOH HOH A . E 5 HOH 150 550 157 HOH HOH A . E 5 HOH 151 551 141 HOH HOH A . E 5 HOH 152 552 115 HOH HOH A . E 5 HOH 153 553 64 HOH HOH A . E 5 HOH 154 554 55 HOH HOH A . E 5 HOH 155 555 125 HOH HOH A . E 5 HOH 156 556 79 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5620 ? 1 MORE -65 ? 1 'SSA (A^2)' 16000 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 402 ? E HOH . 2 1 A HOH 553 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-06-28 2 'Structure model' 1 1 2023-07-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8I1M _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 133 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 41.21 _pdbx_validate_torsion.psi 72.53 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C2'" ? A ADX 302 ? PLANAR . 2 1 "C1'" ? A ADX 302 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 25 ? A ALA 1 2 1 Y 1 A THR 26 ? A THR 2 3 1 Y 1 A ASN 27 ? A ASN 3 4 1 Y 1 A VAL 28 ? A VAL 4 5 1 Y 1 A THR 29 ? A THR 5 6 1 Y 1 A TYR 30 ? A TYR 6 7 1 Y 1 A GLN 31 ? A GLN 7 8 1 Y 1 A ALA 32 ? A ALA 8 9 1 Y 1 A HIS 33 ? A HIS 9 10 1 Y 1 A HIS 34 ? A HIS 10 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ADX _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ADX _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "ADENOSINE-5'-DIPHOSPHATE" ADP 3 "ADENOSINE-5'-PHOSPHOSULFATE" ADX 4 'PHOSPHATE ION' PO4 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OFX _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #