data_8I2D # _entry.id 8I2D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.368 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8I2D pdb_00008i2d 10.2210/pdb8i2d/pdb WWPDB D_1300033899 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8I2D _pdbx_database_status.recvd_initial_deposition_date 2023-01-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tandukar, S.' 1 ? 'Kwon, E.' 2 ? 'Kim, D.Y.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Structure _citation.journal_id_ASTM STRUE6 _citation.journal_id_CSD 2005 _citation.journal_id_ISSN 0969-2126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 31 _citation.language ? _citation.page_first 619 _citation.page_last 628.e4 _citation.title 'Structural insights into the regulation of peptidoglycan DL-endopeptidases by inhibitory protein IseA.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.str.2023.02.013 _citation.pdbx_database_id_PubMed 36963396 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tandukar, S.' 1 ? primary 'Kwon, E.' 2 ? primary 'Kim, D.Y.' 3 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8I2D _cell.details ? _cell.formula_units_Z ? _cell.length_a 55.250 _cell.length_a_esd ? _cell.length_b 55.250 _cell.length_b_esd ? _cell.length_c 68.070 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8I2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable peptidoglycan endopeptidase LytE' 12819.079 1 3.4.-.- ? ? ? 2 water nat water 18.015 175 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Gamma-D-glutamate-meso-diaminopimelate muropeptidase LytE,Minor autolysin LytE,Vegetative cell wall hydrolase LytE' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;LNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGFIWYVLNKQTSVGRTSTAGYWSS(MSE)KSIASPSVGDFVFFTTYKSG PSH(MSE)GIYIGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF ; _entity_poly.pdbx_seq_one_letter_code_can ;LNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGFIWYVLNKQTSVGRTSTAGYWSSMKSIASPSVGDFVFFTTYKSGPSHM GIYIGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ASN n 1 3 VAL n 1 4 SER n 1 5 LYS n 1 6 LEU n 1 7 VAL n 1 8 SER n 1 9 ASP n 1 10 ALA n 1 11 LYS n 1 12 ALA n 1 13 LEU n 1 14 VAL n 1 15 GLY n 1 16 THR n 1 17 PRO n 1 18 TYR n 1 19 LYS n 1 20 TRP n 1 21 GLY n 1 22 GLY n 1 23 THR n 1 24 THR n 1 25 THR n 1 26 SER n 1 27 GLY n 1 28 PHE n 1 29 ASP n 1 30 CYS n 1 31 SER n 1 32 GLY n 1 33 PHE n 1 34 ILE n 1 35 TRP n 1 36 TYR n 1 37 VAL n 1 38 LEU n 1 39 ASN n 1 40 LYS n 1 41 GLN n 1 42 THR n 1 43 SER n 1 44 VAL n 1 45 GLY n 1 46 ARG n 1 47 THR n 1 48 SER n 1 49 THR n 1 50 ALA n 1 51 GLY n 1 52 TYR n 1 53 TRP n 1 54 SER n 1 55 SER n 1 56 MSE n 1 57 LYS n 1 58 SER n 1 59 ILE n 1 60 ALA n 1 61 SER n 1 62 PRO n 1 63 SER n 1 64 VAL n 1 65 GLY n 1 66 ASP n 1 67 PHE n 1 68 VAL n 1 69 PHE n 1 70 PHE n 1 71 THR n 1 72 THR n 1 73 TYR n 1 74 LYS n 1 75 SER n 1 76 GLY n 1 77 PRO n 1 78 SER n 1 79 HIS n 1 80 MSE n 1 81 GLY n 1 82 ILE n 1 83 TYR n 1 84 ILE n 1 85 GLY n 1 86 ASN n 1 87 ASN n 1 88 SER n 1 89 PHE n 1 90 ILE n 1 91 HIS n 1 92 ALA n 1 93 GLY n 1 94 SER n 1 95 ASP n 1 96 GLY n 1 97 VAL n 1 98 GLN n 1 99 ILE n 1 100 SER n 1 101 SER n 1 102 LEU n 1 103 ASN n 1 104 ASN n 1 105 SER n 1 106 TYR n 1 107 TRP n 1 108 LYS n 1 109 PRO n 1 110 ARG n 1 111 TYR n 1 112 LEU n 1 113 GLY n 1 114 ALA n 1 115 LYS n 1 116 ARG n 1 117 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 117 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lytE _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis str. 168' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli B' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 37762 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYTE_BACSU _struct_ref.pdbx_db_accession P54421 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LNVSKLVSDAKALVGTPYKWGGTTTSGFDCSGFIWYVLNKQTSVGRTSTAGYWSSMKSIASPSVGDFVFFTTYKSGPSHM GIYIGNNSFIHAGSDGVQISSLNNSYWKPRYLGAKRF ; _struct_ref.pdbx_align_begin 218 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8I2D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 117 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P54421 _struct_ref_seq.db_align_beg 218 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 334 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 218 _struct_ref_seq.pdbx_auth_seq_align_end 334 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8I2D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method MICROBATCH _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% (w/v) PEG3350, 200 mM Sodium thiocyanate' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-06-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8I2D _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.31 _reflns.d_resolution_low 68.07 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 26096 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 20.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.025 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.31 _reflns_shell.d_res_low 1.33 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1260 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 11.8 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.136 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.446 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8I2D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.31 _refine.ls_d_res_low 42.90 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 26032 _refine.ls_number_reflns_R_free 1268 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.95 _refine.ls_percent_reflns_R_free 4.87 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1745 _refine.ls_R_factor_R_free 0.1837 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1740 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.17 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.11 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 900 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 175 _refine_hist.number_atoms_total 1075 _refine_hist.d_res_high 1.31 _refine_hist.d_res_low 42.90 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.005 ? 927 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.754 ? 1257 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.177 ? 127 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.077 ? 132 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 156 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.31 1.36 . . 146 2672 100.00 . . . . 0.2048 . . . . . . . . . . . 0.2260 'X-RAY DIFFRACTION' 1.36 1.42 . . 145 2701 100.00 . . . . 0.1887 . . . . . . . . . . . 0.2187 'X-RAY DIFFRACTION' 1.42 1.50 . . 127 2712 100.00 . . . . 0.1765 . . . . . . . . . . . 0.2162 'X-RAY DIFFRACTION' 1.50 1.59 . . 129 2723 100.00 . . . . 0.1739 . . . . . . . . . . . 0.2075 'X-RAY DIFFRACTION' 1.59 1.72 . . 173 2687 100.00 . . . . 0.1698 . . . . . . . . . . . 0.2015 'X-RAY DIFFRACTION' 1.72 1.89 . . 123 2750 100.00 . . . . 0.1637 . . . . . . . . . . . 0.1898 'X-RAY DIFFRACTION' 1.89 2.16 . . 127 2774 100.00 . . . . 0.1597 . . . . . . . . . . . 0.1877 'X-RAY DIFFRACTION' 2.16 2.72 . . 147 2793 100.00 . . . . 0.1742 . . . . . . . . . . . 0.1755 'X-RAY DIFFRACTION' 2.72 42.90 . . 151 2952 100.00 . . . . 0.1777 . . . . . . . . . . . 0.1621 # _struct.entry_id 8I2D _struct.title 'Crystal structure of Bacillus subtilis LytE' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8I2D _struct_keywords.text 'DL-endopeptidase, ANTIMICROBIAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 2 ? LEU A 13 ? ASN A 219 LEU A 230 1 ? 12 HELX_P HELX_P2 AA2 ASP A 29 ? LYS A 40 ? ASP A 246 LYS A 257 1 ? 12 HELX_P HELX_P3 AA3 SER A 48 ? MSE A 56 ? SER A 265 MSE A 273 1 ? 9 HELX_P HELX_P4 AA4 TRP A 107 ? PRO A 109 ? TRP A 324 PRO A 326 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 55 C ? ? ? 1_555 A MSE 56 N ? ? A SER 272 A MSE 273 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A MSE 56 C ? ? ? 1_555 A LYS 57 N ? ? A MSE 273 A LYS 274 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A HIS 79 C ? ? ? 1_555 A MSE 80 N ? ? A HIS 296 A MSE 297 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A MSE 80 C ? ? ? 1_555 A GLY 81 N ? ? A MSE 297 A GLY 298 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 23 ? THR A 24 ? THR A 240 THR A 241 AA1 2 GLY A 27 ? PHE A 28 ? GLY A 244 PHE A 245 AA2 1 LYS A 57 ? SER A 58 ? LYS A 274 SER A 275 AA2 2 TYR A 111 ? ARG A 116 ? TYR A 328 ARG A 333 AA2 3 PHE A 67 ? PHE A 70 ? PHE A 284 PHE A 287 AA2 4 HIS A 79 ? GLY A 85 ? HIS A 296 GLY A 302 AA2 5 SER A 88 ? GLY A 93 ? SER A 305 GLY A 310 AA2 6 GLY A 96 ? SER A 101 ? GLY A 313 SER A 318 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 24 ? N THR A 241 O GLY A 27 ? O GLY A 244 AA2 1 2 N LYS A 57 ? N LYS A 274 O ARG A 116 ? O ARG A 333 AA2 2 3 O LEU A 112 ? O LEU A 329 N PHE A 69 ? N PHE A 286 AA2 3 4 N PHE A 70 ? N PHE A 287 O HIS A 79 ? O HIS A 296 AA2 4 5 N ILE A 82 ? N ILE A 299 O ILE A 90 ? O ILE A 307 AA2 5 6 N PHE A 89 ? N PHE A 306 O SER A 100 ? O SER A 317 # _atom_sites.entry_id 8I2D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.018100 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018100 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014691 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 218 218 LEU LEU A . n A 1 2 ASN 2 219 219 ASN ASN A . n A 1 3 VAL 3 220 220 VAL VAL A . n A 1 4 SER 4 221 221 SER SER A . n A 1 5 LYS 5 222 222 LYS LYS A . n A 1 6 LEU 6 223 223 LEU LEU A . n A 1 7 VAL 7 224 224 VAL VAL A . n A 1 8 SER 8 225 225 SER SER A . n A 1 9 ASP 9 226 226 ASP ASP A . n A 1 10 ALA 10 227 227 ALA ALA A . n A 1 11 LYS 11 228 228 LYS LYS A . n A 1 12 ALA 12 229 229 ALA ALA A . n A 1 13 LEU 13 230 230 LEU LEU A . n A 1 14 VAL 14 231 231 VAL VAL A . n A 1 15 GLY 15 232 232 GLY GLY A . n A 1 16 THR 16 233 233 THR THR A . n A 1 17 PRO 17 234 234 PRO PRO A . n A 1 18 TYR 18 235 235 TYR TYR A . n A 1 19 LYS 19 236 236 LYS LYS A . n A 1 20 TRP 20 237 237 TRP TRP A . n A 1 21 GLY 21 238 238 GLY GLY A . n A 1 22 GLY 22 239 239 GLY GLY A . n A 1 23 THR 23 240 240 THR THR A . n A 1 24 THR 24 241 241 THR THR A . n A 1 25 THR 25 242 242 THR THR A . n A 1 26 SER 26 243 243 SER SER A . n A 1 27 GLY 27 244 244 GLY GLY A . n A 1 28 PHE 28 245 245 PHE PHE A . n A 1 29 ASP 29 246 246 ASP ASP A . n A 1 30 CYS 30 247 247 CYS CYS A . n A 1 31 SER 31 248 248 SER SER A . n A 1 32 GLY 32 249 249 GLY GLY A . n A 1 33 PHE 33 250 250 PHE PHE A . n A 1 34 ILE 34 251 251 ILE ILE A . n A 1 35 TRP 35 252 252 TRP TRP A . n A 1 36 TYR 36 253 253 TYR TYR A . n A 1 37 VAL 37 254 254 VAL VAL A . n A 1 38 LEU 38 255 255 LEU LEU A . n A 1 39 ASN 39 256 256 ASN ASN A . n A 1 40 LYS 40 257 257 LYS LYS A . n A 1 41 GLN 41 258 258 GLN GLN A . n A 1 42 THR 42 259 259 THR THR A . n A 1 43 SER 43 260 260 SER SER A . n A 1 44 VAL 44 261 261 VAL VAL A . n A 1 45 GLY 45 262 262 GLY GLY A . n A 1 46 ARG 46 263 263 ARG ARG A . n A 1 47 THR 47 264 264 THR THR A . n A 1 48 SER 48 265 265 SER SER A . n A 1 49 THR 49 266 266 THR THR A . n A 1 50 ALA 50 267 267 ALA ALA A . n A 1 51 GLY 51 268 268 GLY GLY A . n A 1 52 TYR 52 269 269 TYR TYR A . n A 1 53 TRP 53 270 270 TRP TRP A . n A 1 54 SER 54 271 271 SER SER A . n A 1 55 SER 55 272 272 SER SER A . n A 1 56 MSE 56 273 273 MSE MSE A . n A 1 57 LYS 57 274 274 LYS LYS A . n A 1 58 SER 58 275 275 SER SER A . n A 1 59 ILE 59 276 276 ILE ILE A . n A 1 60 ALA 60 277 277 ALA ALA A . n A 1 61 SER 61 278 278 SER SER A . n A 1 62 PRO 62 279 279 PRO PRO A . n A 1 63 SER 63 280 280 SER SER A . n A 1 64 VAL 64 281 281 VAL VAL A . n A 1 65 GLY 65 282 282 GLY GLY A . n A 1 66 ASP 66 283 283 ASP ASP A . n A 1 67 PHE 67 284 284 PHE PHE A . n A 1 68 VAL 68 285 285 VAL VAL A . n A 1 69 PHE 69 286 286 PHE PHE A . n A 1 70 PHE 70 287 287 PHE PHE A . n A 1 71 THR 71 288 288 THR THR A . n A 1 72 THR 72 289 289 THR THR A . n A 1 73 TYR 73 290 290 TYR TYR A . n A 1 74 LYS 74 291 291 LYS LYS A . n A 1 75 SER 75 292 292 SER SER A . n A 1 76 GLY 76 293 293 GLY GLY A . n A 1 77 PRO 77 294 294 PRO PRO A . n A 1 78 SER 78 295 295 SER SER A . n A 1 79 HIS 79 296 296 HIS HIS A . n A 1 80 MSE 80 297 297 MSE MSE A . n A 1 81 GLY 81 298 298 GLY GLY A . n A 1 82 ILE 82 299 299 ILE ILE A . n A 1 83 TYR 83 300 300 TYR TYR A . n A 1 84 ILE 84 301 301 ILE ILE A . n A 1 85 GLY 85 302 302 GLY GLY A . n A 1 86 ASN 86 303 303 ASN ASN A . n A 1 87 ASN 87 304 304 ASN ASN A . n A 1 88 SER 88 305 305 SER SER A . n A 1 89 PHE 89 306 306 PHE PHE A . n A 1 90 ILE 90 307 307 ILE ILE A . n A 1 91 HIS 91 308 308 HIS HIS A . n A 1 92 ALA 92 309 309 ALA ALA A . n A 1 93 GLY 93 310 310 GLY GLY A . n A 1 94 SER 94 311 311 SER SER A . n A 1 95 ASP 95 312 312 ASP ASP A . n A 1 96 GLY 96 313 313 GLY GLY A . n A 1 97 VAL 97 314 314 VAL VAL A . n A 1 98 GLN 98 315 315 GLN GLN A . n A 1 99 ILE 99 316 316 ILE ILE A . n A 1 100 SER 100 317 317 SER SER A . n A 1 101 SER 101 318 318 SER SER A . n A 1 102 LEU 102 319 319 LEU LEU A . n A 1 103 ASN 103 320 320 ASN ASN A . n A 1 104 ASN 104 321 321 ASN ASN A . n A 1 105 SER 105 322 322 SER SER A . n A 1 106 TYR 106 323 323 TYR TYR A . n A 1 107 TRP 107 324 324 TRP TRP A . n A 1 108 LYS 108 325 325 LYS LYS A . n A 1 109 PRO 109 326 326 PRO PRO A . n A 1 110 ARG 110 327 327 ARG ARG A . n A 1 111 TYR 111 328 328 TYR TYR A . n A 1 112 LEU 112 329 329 LEU LEU A . n A 1 113 GLY 113 330 330 GLY GLY A . n A 1 114 ALA 114 331 331 ALA ALA A . n A 1 115 LYS 115 332 332 LYS LYS A . n A 1 116 ARG 116 333 333 ARG ARG A . n A 1 117 PHE 117 334 334 PHE PHE A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email dyokim@ynu.ac.kr _pdbx_contact_author.name_first 'Dong Young' _pdbx_contact_author.name_last Kim _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7594-9083 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 401 15 HOH HOH A . B 2 HOH 2 402 162 HOH HOH A . B 2 HOH 3 403 143 HOH HOH A . B 2 HOH 4 404 50 HOH HOH A . B 2 HOH 5 405 44 HOH HOH A . B 2 HOH 6 406 141 HOH HOH A . B 2 HOH 7 407 77 HOH HOH A . B 2 HOH 8 408 37 HOH HOH A . B 2 HOH 9 409 38 HOH HOH A . B 2 HOH 10 410 42 HOH HOH A . B 2 HOH 11 411 79 HOH HOH A . B 2 HOH 12 412 20 HOH HOH A . B 2 HOH 13 413 57 HOH HOH A . B 2 HOH 14 414 68 HOH HOH A . B 2 HOH 15 415 172 HOH HOH A . B 2 HOH 16 416 101 HOH HOH A . B 2 HOH 17 417 131 HOH HOH A . B 2 HOH 18 418 76 HOH HOH A . B 2 HOH 19 419 130 HOH HOH A . B 2 HOH 20 420 142 HOH HOH A . B 2 HOH 21 421 102 HOH HOH A . B 2 HOH 22 422 60 HOH HOH A . B 2 HOH 23 423 86 HOH HOH A . B 2 HOH 24 424 111 HOH HOH A . B 2 HOH 25 425 56 HOH HOH A . B 2 HOH 26 426 94 HOH HOH A . B 2 HOH 27 427 11 HOH HOH A . B 2 HOH 28 428 8 HOH HOH A . B 2 HOH 29 429 47 HOH HOH A . B 2 HOH 30 430 2 HOH HOH A . B 2 HOH 31 431 104 HOH HOH A . B 2 HOH 32 432 51 HOH HOH A . B 2 HOH 33 433 6 HOH HOH A . B 2 HOH 34 434 74 HOH HOH A . B 2 HOH 35 435 13 HOH HOH A . B 2 HOH 36 436 53 HOH HOH A . B 2 HOH 37 437 41 HOH HOH A . B 2 HOH 38 438 63 HOH HOH A . B 2 HOH 39 439 23 HOH HOH A . B 2 HOH 40 440 54 HOH HOH A . B 2 HOH 41 441 70 HOH HOH A . B 2 HOH 42 442 93 HOH HOH A . B 2 HOH 43 443 7 HOH HOH A . B 2 HOH 44 444 153 HOH HOH A . B 2 HOH 45 445 27 HOH HOH A . B 2 HOH 46 446 28 HOH HOH A . B 2 HOH 47 447 121 HOH HOH A . B 2 HOH 48 448 45 HOH HOH A . B 2 HOH 49 449 25 HOH HOH A . B 2 HOH 50 450 98 HOH HOH A . B 2 HOH 51 451 67 HOH HOH A . B 2 HOH 52 452 71 HOH HOH A . B 2 HOH 53 453 122 HOH HOH A . B 2 HOH 54 454 61 HOH HOH A . B 2 HOH 55 455 3 HOH HOH A . B 2 HOH 56 456 12 HOH HOH A . B 2 HOH 57 457 175 HOH HOH A . B 2 HOH 58 458 59 HOH HOH A . B 2 HOH 59 459 58 HOH HOH A . B 2 HOH 60 460 17 HOH HOH A . B 2 HOH 61 461 62 HOH HOH A . B 2 HOH 62 462 31 HOH HOH A . B 2 HOH 63 463 124 HOH HOH A . B 2 HOH 64 464 40 HOH HOH A . B 2 HOH 65 465 146 HOH HOH A . B 2 HOH 66 466 5 HOH HOH A . B 2 HOH 67 467 81 HOH HOH A . B 2 HOH 68 468 4 HOH HOH A . B 2 HOH 69 469 22 HOH HOH A . B 2 HOH 70 470 119 HOH HOH A . B 2 HOH 71 471 78 HOH HOH A . B 2 HOH 72 472 73 HOH HOH A . B 2 HOH 73 473 72 HOH HOH A . B 2 HOH 74 474 134 HOH HOH A . B 2 HOH 75 475 26 HOH HOH A . B 2 HOH 76 476 1 HOH HOH A . B 2 HOH 77 477 100 HOH HOH A . B 2 HOH 78 478 21 HOH HOH A . B 2 HOH 79 479 137 HOH HOH A . B 2 HOH 80 480 87 HOH HOH A . B 2 HOH 81 481 105 HOH HOH A . B 2 HOH 82 482 43 HOH HOH A . B 2 HOH 83 483 65 HOH HOH A . B 2 HOH 84 484 49 HOH HOH A . B 2 HOH 85 485 106 HOH HOH A . B 2 HOH 86 486 168 HOH HOH A . B 2 HOH 87 487 36 HOH HOH A . B 2 HOH 88 488 14 HOH HOH A . B 2 HOH 89 489 166 HOH HOH A . B 2 HOH 90 490 33 HOH HOH A . B 2 HOH 91 491 133 HOH HOH A . B 2 HOH 92 492 99 HOH HOH A . B 2 HOH 93 493 19 HOH HOH A . B 2 HOH 94 494 84 HOH HOH A . B 2 HOH 95 495 55 HOH HOH A . B 2 HOH 96 496 29 HOH HOH A . B 2 HOH 97 497 117 HOH HOH A . B 2 HOH 98 498 9 HOH HOH A . B 2 HOH 99 499 48 HOH HOH A . B 2 HOH 100 500 129 HOH HOH A . B 2 HOH 101 501 35 HOH HOH A . B 2 HOH 102 502 18 HOH HOH A . B 2 HOH 103 503 155 HOH HOH A . B 2 HOH 104 504 30 HOH HOH A . B 2 HOH 105 505 24 HOH HOH A . B 2 HOH 106 506 135 HOH HOH A . B 2 HOH 107 507 39 HOH HOH A . B 2 HOH 108 508 10 HOH HOH A . B 2 HOH 109 509 114 HOH HOH A . B 2 HOH 110 510 139 HOH HOH A . B 2 HOH 111 511 64 HOH HOH A . B 2 HOH 112 512 170 HOH HOH A . B 2 HOH 113 513 16 HOH HOH A . B 2 HOH 114 514 128 HOH HOH A . B 2 HOH 115 515 52 HOH HOH A . B 2 HOH 116 516 89 HOH HOH A . B 2 HOH 117 517 163 HOH HOH A . B 2 HOH 118 518 95 HOH HOH A . B 2 HOH 119 519 160 HOH HOH A . B 2 HOH 120 520 85 HOH HOH A . B 2 HOH 121 521 112 HOH HOH A . B 2 HOH 122 522 152 HOH HOH A . B 2 HOH 123 523 127 HOH HOH A . B 2 HOH 124 524 69 HOH HOH A . B 2 HOH 125 525 149 HOH HOH A . B 2 HOH 126 526 103 HOH HOH A . B 2 HOH 127 527 46 HOH HOH A . B 2 HOH 128 528 120 HOH HOH A . B 2 HOH 129 529 109 HOH HOH A . B 2 HOH 130 530 144 HOH HOH A . B 2 HOH 131 531 115 HOH HOH A . B 2 HOH 132 532 90 HOH HOH A . B 2 HOH 133 533 118 HOH HOH A . B 2 HOH 134 534 150 HOH HOH A . B 2 HOH 135 535 91 HOH HOH A . B 2 HOH 136 536 145 HOH HOH A . B 2 HOH 137 537 88 HOH HOH A . B 2 HOH 138 538 156 HOH HOH A . B 2 HOH 139 539 34 HOH HOH A . B 2 HOH 140 540 107 HOH HOH A . B 2 HOH 141 541 136 HOH HOH A . B 2 HOH 142 542 116 HOH HOH A . B 2 HOH 143 543 147 HOH HOH A . B 2 HOH 144 544 157 HOH HOH A . B 2 HOH 145 545 96 HOH HOH A . B 2 HOH 146 546 161 HOH HOH A . B 2 HOH 147 547 92 HOH HOH A . B 2 HOH 148 548 173 HOH HOH A . B 2 HOH 149 549 97 HOH HOH A . B 2 HOH 150 550 108 HOH HOH A . B 2 HOH 151 551 80 HOH HOH A . B 2 HOH 152 552 171 HOH HOH A . B 2 HOH 153 553 82 HOH HOH A . B 2 HOH 154 554 164 HOH HOH A . B 2 HOH 155 555 169 HOH HOH A . B 2 HOH 156 556 126 HOH HOH A . B 2 HOH 157 557 151 HOH HOH A . B 2 HOH 158 558 32 HOH HOH A . B 2 HOH 159 559 174 HOH HOH A . B 2 HOH 160 560 66 HOH HOH A . B 2 HOH 161 561 140 HOH HOH A . B 2 HOH 162 562 113 HOH HOH A . B 2 HOH 163 563 154 HOH HOH A . B 2 HOH 164 564 165 HOH HOH A . B 2 HOH 165 565 125 HOH HOH A . B 2 HOH 166 566 132 HOH HOH A . B 2 HOH 167 567 123 HOH HOH A . B 2 HOH 168 568 148 HOH HOH A . B 2 HOH 169 569 83 HOH HOH A . B 2 HOH 170 570 138 HOH HOH A . B 2 HOH 171 571 75 HOH HOH A . B 2 HOH 172 572 110 HOH HOH A . B 2 HOH 173 573 159 HOH HOH A . B 2 HOH 174 574 167 HOH HOH A . B 2 HOH 175 575 158 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 56 A MSE 273 ? MET 'modified residue' 2 A MSE 80 A MSE 297 ? MET 'modified residue' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 5870 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 406 ? B HOH . 2 1 A HOH 430 ? B HOH . 3 1 A HOH 559 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-04-19 2 'Structure model' 1 1 2023-05-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 16.3055 _pdbx_refine_tls.origin_y 42.0716 _pdbx_refine_tls.origin_z 33.2787 _pdbx_refine_tls.T[1][1] 0.0548 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0067 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0047 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0659 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0056 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0680 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.6974 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -0.3526 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.0193 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.9586 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.2536 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.9589 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.0191 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.0626 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.0048 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0649 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0016 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0125 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] 0.0352 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0411 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0110 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _pdbx_entry_details.entry_id 8I2D _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 531 ? ? O A HOH 542 ? ? 2.12 2 1 O A HOH 507 ? ? O A HOH 530 ? ? 2.13 3 1 O A HOH 451 ? ? O A HOH 515 ? ? 2.17 4 1 O A HOH 540 ? ? O A HOH 565 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 447 ? ? 1_555 O A HOH 470 ? ? 4_465 2.13 2 1 O A HOH 420 ? ? 1_555 O A HOH 568 ? ? 5_555 2.14 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 289 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -114.18 _pdbx_validate_torsion.psi -84.54 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 572 ? 5.81 . 2 1 O ? A HOH 573 ? 5.84 . 3 1 O ? A HOH 574 ? 6.06 . 4 1 O ? A HOH 575 ? 6.38 . # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #