data_8I6K # _entry.id 8I6K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8I6K pdb_00008i6k 10.2210/pdb8i6k/pdb WWPDB D_1300035007 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-07-19 2 'Structure model' 1 1 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8I6K _pdbx_database_status.recvd_initial_deposition_date 2023-01-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jint@ustc.edu.cn _pdbx_contact_author.name_first Jin _pdbx_contact_author.name_last 'Tengchuan Jin' _pdbx_contact_author.name_mi Tengchuan _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1395-188X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, Y.L.' 1 0000-0001-5466-779X 'Jin, T.C.' 2 0000-0002-1395-188X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Int.J.Biol.Macromol. _citation.journal_id_ASTM IJBMDR _citation.journal_id_CSD 0708 _citation.journal_id_ISSN 0141-8130 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 245 _citation.language ? _citation.page_first 125461 _citation.page_last 125461 _citation.title 'Structural mechanism of dsDNA recognition by the hMNDA HIN domain: New insights into the DNA-binding model of a PYHIN protein.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ijbiomac.2023.125461 _citation.pdbx_database_id_PubMed 37348588 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, Y.' 1 ? primary 'Zhang, C.' 2 ? primary 'Samad, A.' 3 ? primary 'Zheng, P.' 4 ? primary 'Li, Y.' 5 ? primary 'Chen, F.' 6 ? primary 'Jin, T.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Myeloid cell nuclear differentiation antigen' 24462.379 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*GP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') ; 3665.368 2 ? ? ? ? 3 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 37 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSVDQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSEC KGVMEIKEASSVSDFNQNFEVPNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSG KWHNIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVNAAAS ; ;GSVDQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSEC KGVMEIKEASSVSDFNQNFEVPNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSG KWHNIKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVNAAAS ; A ? 2 polydeoxyribonucleotide no no '(DG)(DG)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DG)(DC)(DC)' GGCGCGCGCGCC B,C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'DI(HYDROXYETHYL)ETHER' PEG 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 VAL n 1 4 ASP n 1 5 GLN n 1 6 VAL n 1 7 ASP n 1 8 ALA n 1 9 ARG n 1 10 ARG n 1 11 ASN n 1 12 VAL n 1 13 PRO n 1 14 GLN n 1 15 ASN n 1 16 ASP n 1 17 PRO n 1 18 VAL n 1 19 THR n 1 20 VAL n 1 21 VAL n 1 22 VAL n 1 23 LEU n 1 24 LYS n 1 25 ALA n 1 26 THR n 1 27 ALA n 1 28 PRO n 1 29 PHE n 1 30 LYS n 1 31 TYR n 1 32 GLU n 1 33 SER n 1 34 PRO n 1 35 GLU n 1 36 ASN n 1 37 GLY n 1 38 LYS n 1 39 SER n 1 40 THR n 1 41 MET n 1 42 PHE n 1 43 HIS n 1 44 ALA n 1 45 THR n 1 46 VAL n 1 47 ALA n 1 48 SER n 1 49 LYS n 1 50 THR n 1 51 GLN n 1 52 TYR n 1 53 PHE n 1 54 HIS n 1 55 VAL n 1 56 LYS n 1 57 VAL n 1 58 PHE n 1 59 ASP n 1 60 ILE n 1 61 ASN n 1 62 LEU n 1 63 LYS n 1 64 GLU n 1 65 LYS n 1 66 PHE n 1 67 VAL n 1 68 ARG n 1 69 LYS n 1 70 LYS n 1 71 VAL n 1 72 ILE n 1 73 THR n 1 74 ILE n 1 75 SER n 1 76 ASP n 1 77 TYR n 1 78 SER n 1 79 GLU n 1 80 CYS n 1 81 LYS n 1 82 GLY n 1 83 VAL n 1 84 MET n 1 85 GLU n 1 86 ILE n 1 87 LYS n 1 88 GLU n 1 89 ALA n 1 90 SER n 1 91 SER n 1 92 VAL n 1 93 SER n 1 94 ASP n 1 95 PHE n 1 96 ASN n 1 97 GLN n 1 98 ASN n 1 99 PHE n 1 100 GLU n 1 101 VAL n 1 102 PRO n 1 103 ASN n 1 104 ARG n 1 105 ILE n 1 106 ILE n 1 107 GLU n 1 108 ILE n 1 109 ALA n 1 110 ASN n 1 111 LYS n 1 112 THR n 1 113 PRO n 1 114 LYS n 1 115 ILE n 1 116 SER n 1 117 GLN n 1 118 LEU n 1 119 TYR n 1 120 LYS n 1 121 GLN n 1 122 ALA n 1 123 SER n 1 124 GLY n 1 125 THR n 1 126 MET n 1 127 VAL n 1 128 TYR n 1 129 GLY n 1 130 LEU n 1 131 PHE n 1 132 MET n 1 133 LEU n 1 134 GLN n 1 135 LYS n 1 136 LYS n 1 137 SER n 1 138 VAL n 1 139 HIS n 1 140 LYS n 1 141 LYS n 1 142 ASN n 1 143 THR n 1 144 ILE n 1 145 TYR n 1 146 GLU n 1 147 ILE n 1 148 GLN n 1 149 ASP n 1 150 ASN n 1 151 THR n 1 152 GLY n 1 153 SER n 1 154 MET n 1 155 ASP n 1 156 VAL n 1 157 VAL n 1 158 GLY n 1 159 SER n 1 160 GLY n 1 161 LYS n 1 162 TRP n 1 163 HIS n 1 164 ASN n 1 165 ILE n 1 166 LYS n 1 167 CYS n 1 168 GLU n 1 169 LYS n 1 170 GLY n 1 171 ASP n 1 172 LYS n 1 173 LEU n 1 174 ARG n 1 175 LEU n 1 176 PHE n 1 177 CYS n 1 178 LEU n 1 179 GLN n 1 180 LEU n 1 181 ARG n 1 182 THR n 1 183 VAL n 1 184 ASP n 1 185 ARG n 1 186 LYS n 1 187 LEU n 1 188 LYS n 1 189 LEU n 1 190 VAL n 1 191 CYS n 1 192 GLY n 1 193 SER n 1 194 HIS n 1 195 SER n 1 196 PHE n 1 197 ILE n 1 198 LYS n 1 199 VAL n 1 200 ILE n 1 201 LYS n 1 202 ALA n 1 203 LYS n 1 204 LYS n 1 205 ASN n 1 206 LYS n 1 207 GLU n 1 208 GLY n 1 209 PRO n 1 210 MET n 1 211 ASN n 1 212 VAL n 1 213 ASN n 1 214 ALA n 1 215 ALA n 1 216 ALA n 1 217 SER n 2 1 DG n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DG n 2 9 DC n 2 10 DG n 2 11 DC n 2 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 217 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MNDA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details 'MBP tag' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 195 ? ? ? A . n A 1 2 SER 2 196 ? ? ? A . n A 1 3 VAL 3 197 ? ? ? A . n A 1 4 ASP 4 198 ? ? ? A . n A 1 5 GLN 5 199 ? ? ? A . n A 1 6 VAL 6 200 ? ? ? A . n A 1 7 ASP 7 201 ? ? ? A . n A 1 8 ALA 8 202 ? ? ? A . n A 1 9 ARG 9 203 ? ? ? A . n A 1 10 ARG 10 204 ? ? ? A . n A 1 11 ASN 11 205 ? ? ? A . n A 1 12 VAL 12 206 ? ? ? A . n A 1 13 PRO 13 207 ? ? ? A . n A 1 14 GLN 14 208 ? ? ? A . n A 1 15 ASN 15 209 ? ? ? A . n A 1 16 ASP 16 210 210 ASP ASP A . n A 1 17 PRO 17 211 211 PRO PRO A . n A 1 18 VAL 18 212 212 VAL VAL A . n A 1 19 THR 19 213 213 THR THR A . n A 1 20 VAL 20 214 214 VAL VAL A . n A 1 21 VAL 21 215 215 VAL VAL A . n A 1 22 VAL 22 216 216 VAL VAL A . n A 1 23 LEU 23 217 217 LEU LEU A . n A 1 24 LYS 24 218 218 LYS LYS A . n A 1 25 ALA 25 219 219 ALA ALA A . n A 1 26 THR 26 220 220 THR THR A . n A 1 27 ALA 27 221 221 ALA ALA A . n A 1 28 PRO 28 222 222 PRO PRO A . n A 1 29 PHE 29 223 223 PHE PHE A . n A 1 30 LYS 30 224 224 LYS LYS A . n A 1 31 TYR 31 225 225 TYR TYR A . n A 1 32 GLU 32 226 226 GLU GLU A . n A 1 33 SER 33 227 227 SER SER A . n A 1 34 PRO 34 228 ? ? ? A . n A 1 35 GLU 35 229 ? ? ? A . n A 1 36 ASN 36 230 ? ? ? A . n A 1 37 GLY 37 231 231 GLY GLY A . n A 1 38 LYS 38 232 232 LYS LYS A . n A 1 39 SER 39 233 233 SER SER A . n A 1 40 THR 40 234 234 THR THR A . n A 1 41 MET 41 235 235 MET MET A . n A 1 42 PHE 42 236 236 PHE PHE A . n A 1 43 HIS 43 237 237 HIS HIS A . n A 1 44 ALA 44 238 238 ALA ALA A . n A 1 45 THR 45 239 239 THR THR A . n A 1 46 VAL 46 240 240 VAL VAL A . n A 1 47 ALA 47 241 241 ALA ALA A . n A 1 48 SER 48 242 242 SER SER A . n A 1 49 LYS 49 243 243 LYS LYS A . n A 1 50 THR 50 244 244 THR THR A . n A 1 51 GLN 51 245 245 GLN GLN A . n A 1 52 TYR 52 246 246 TYR TYR A . n A 1 53 PHE 53 247 247 PHE PHE A . n A 1 54 HIS 54 248 248 HIS HIS A . n A 1 55 VAL 55 249 249 VAL VAL A . n A 1 56 LYS 56 250 250 LYS LYS A . n A 1 57 VAL 57 251 251 VAL VAL A . n A 1 58 PHE 58 252 252 PHE PHE A . n A 1 59 ASP 59 253 253 ASP ASP A . n A 1 60 ILE 60 254 254 ILE ILE A . n A 1 61 ASN 61 255 255 ASN ASN A . n A 1 62 LEU 62 256 256 LEU LEU A . n A 1 63 LYS 63 257 257 LYS LYS A . n A 1 64 GLU 64 258 258 GLU GLU A . n A 1 65 LYS 65 259 259 LYS LYS A . n A 1 66 PHE 66 260 260 PHE PHE A . n A 1 67 VAL 67 261 261 VAL VAL A . n A 1 68 ARG 68 262 262 ARG ARG A . n A 1 69 LYS 69 263 263 LYS LYS A . n A 1 70 LYS 70 264 264 LYS LYS A . n A 1 71 VAL 71 265 265 VAL VAL A . n A 1 72 ILE 72 266 266 ILE ILE A . n A 1 73 THR 73 267 267 THR THR A . n A 1 74 ILE 74 268 268 ILE ILE A . n A 1 75 SER 75 269 269 SER SER A . n A 1 76 ASP 76 270 270 ASP ASP A . n A 1 77 TYR 77 271 271 TYR TYR A . n A 1 78 SER 78 272 272 SER SER A . n A 1 79 GLU 79 273 273 GLU GLU A . n A 1 80 CYS 80 274 274 CYS CYS A . n A 1 81 LYS 81 275 275 LYS LYS A . n A 1 82 GLY 82 276 276 GLY GLY A . n A 1 83 VAL 83 277 277 VAL VAL A . n A 1 84 MET 84 278 278 MET MET A . n A 1 85 GLU 85 279 279 GLU GLU A . n A 1 86 ILE 86 280 280 ILE ILE A . n A 1 87 LYS 87 281 281 LYS LYS A . n A 1 88 GLU 88 282 282 GLU GLU A . n A 1 89 ALA 89 283 283 ALA ALA A . n A 1 90 SER 90 284 284 SER SER A . n A 1 91 SER 91 285 285 SER SER A . n A 1 92 VAL 92 286 286 VAL VAL A . n A 1 93 SER 93 287 287 SER SER A . n A 1 94 ASP 94 288 288 ASP ASP A . n A 1 95 PHE 95 289 289 PHE PHE A . n A 1 96 ASN 96 290 290 ASN ASN A . n A 1 97 GLN 97 291 291 GLN GLN A . n A 1 98 ASN 98 292 292 ASN ASN A . n A 1 99 PHE 99 293 293 PHE PHE A . n A 1 100 GLU 100 294 294 GLU GLU A . n A 1 101 VAL 101 295 295 VAL VAL A . n A 1 102 PRO 102 296 296 PRO PRO A . n A 1 103 ASN 103 297 297 ASN ASN A . n A 1 104 ARG 104 298 298 ARG ARG A . n A 1 105 ILE 105 299 299 ILE ILE A . n A 1 106 ILE 106 300 300 ILE ILE A . n A 1 107 GLU 107 301 301 GLU GLU A . n A 1 108 ILE 108 302 302 ILE ILE A . n A 1 109 ALA 109 303 303 ALA ALA A . n A 1 110 ASN 110 304 304 ASN ASN A . n A 1 111 LYS 111 305 305 LYS LYS A . n A 1 112 THR 112 306 306 THR THR A . n A 1 113 PRO 113 307 307 PRO PRO A . n A 1 114 LYS 114 308 308 LYS LYS A . n A 1 115 ILE 115 309 309 ILE ILE A . n A 1 116 SER 116 310 310 SER SER A . n A 1 117 GLN 117 311 311 GLN GLN A . n A 1 118 LEU 118 312 312 LEU LEU A . n A 1 119 TYR 119 313 313 TYR TYR A . n A 1 120 LYS 120 314 314 LYS LYS A . n A 1 121 GLN 121 315 315 GLN GLN A . n A 1 122 ALA 122 316 316 ALA ALA A . n A 1 123 SER 123 317 317 SER SER A . n A 1 124 GLY 124 318 318 GLY GLY A . n A 1 125 THR 125 319 319 THR THR A . n A 1 126 MET 126 320 320 MET MET A . n A 1 127 VAL 127 321 321 VAL VAL A . n A 1 128 TYR 128 322 322 TYR TYR A . n A 1 129 GLY 129 323 323 GLY GLY A . n A 1 130 LEU 130 324 324 LEU LEU A . n A 1 131 PHE 131 325 325 PHE PHE A . n A 1 132 MET 132 326 326 MET MET A . n A 1 133 LEU 133 327 327 LEU LEU A . n A 1 134 GLN 134 328 328 GLN GLN A . n A 1 135 LYS 135 329 329 LYS LYS A . n A 1 136 LYS 136 330 330 LYS LYS A . n A 1 137 SER 137 331 331 SER SER A . n A 1 138 VAL 138 332 332 VAL VAL A . n A 1 139 HIS 139 333 333 HIS HIS A . n A 1 140 LYS 140 334 334 LYS LYS A . n A 1 141 LYS 141 335 335 LYS LYS A . n A 1 142 ASN 142 336 336 ASN ASN A . n A 1 143 THR 143 337 337 THR THR A . n A 1 144 ILE 144 338 338 ILE ILE A . n A 1 145 TYR 145 339 339 TYR TYR A . n A 1 146 GLU 146 340 340 GLU GLU A . n A 1 147 ILE 147 341 341 ILE ILE A . n A 1 148 GLN 148 342 342 GLN GLN A . n A 1 149 ASP 149 343 343 ASP ASP A . n A 1 150 ASN 150 344 344 ASN ASN A . n A 1 151 THR 151 345 345 THR THR A . n A 1 152 GLY 152 346 346 GLY GLY A . n A 1 153 SER 153 347 347 SER SER A . n A 1 154 MET 154 348 348 MET MET A . n A 1 155 ASP 155 349 349 ASP ASP A . n A 1 156 VAL 156 350 350 VAL VAL A . n A 1 157 VAL 157 351 351 VAL VAL A . n A 1 158 GLY 158 352 352 GLY GLY A . n A 1 159 SER 159 353 353 SER SER A . n A 1 160 GLY 160 354 354 GLY GLY A . n A 1 161 LYS 161 355 355 LYS LYS A . n A 1 162 TRP 162 356 356 TRP TRP A . n A 1 163 HIS 163 357 357 HIS HIS A . n A 1 164 ASN 164 358 358 ASN ASN A . n A 1 165 ILE 165 359 359 ILE ILE A . n A 1 166 LYS 166 360 360 LYS LYS A . n A 1 167 CYS 167 361 361 CYS CYS A . n A 1 168 GLU 168 362 362 GLU GLU A . n A 1 169 LYS 169 363 363 LYS LYS A . n A 1 170 GLY 170 364 364 GLY GLY A . n A 1 171 ASP 171 365 365 ASP ASP A . n A 1 172 LYS 172 366 366 LYS LYS A . n A 1 173 LEU 173 367 367 LEU LEU A . n A 1 174 ARG 174 368 368 ARG ARG A . n A 1 175 LEU 175 369 369 LEU LEU A . n A 1 176 PHE 176 370 370 PHE PHE A . n A 1 177 CYS 177 371 371 CYS CYS A . n A 1 178 LEU 178 372 372 LEU LEU A . n A 1 179 GLN 179 373 373 GLN GLN A . n A 1 180 LEU 180 374 374 LEU LEU A . n A 1 181 ARG 181 375 375 ARG ARG A . n A 1 182 THR 182 376 376 THR THR A . n A 1 183 VAL 183 377 377 VAL VAL A . n A 1 184 ASP 184 378 378 ASP ASP A . n A 1 185 ARG 185 379 379 ARG ARG A . n A 1 186 LYS 186 380 380 LYS LYS A . n A 1 187 LEU 187 381 381 LEU LEU A . n A 1 188 LYS 188 382 382 LYS LYS A . n A 1 189 LEU 189 383 383 LEU LEU A . n A 1 190 VAL 190 384 384 VAL VAL A . n A 1 191 CYS 191 385 385 CYS CYS A . n A 1 192 GLY 192 386 386 GLY GLY A . n A 1 193 SER 193 387 387 SER SER A . n A 1 194 HIS 194 388 388 HIS HIS A . n A 1 195 SER 195 389 389 SER SER A . n A 1 196 PHE 196 390 390 PHE PHE A . n A 1 197 ILE 197 391 391 ILE ILE A . n A 1 198 LYS 198 392 392 LYS LYS A . n A 1 199 VAL 199 393 393 VAL VAL A . n A 1 200 ILE 200 394 394 ILE ILE A . n A 1 201 LYS 201 395 395 LYS LYS A . n A 1 202 ALA 202 396 ? ? ? A . n A 1 203 LYS 203 397 ? ? ? A . n A 1 204 LYS 204 398 ? ? ? A . n A 1 205 ASN 205 399 ? ? ? A . n A 1 206 LYS 206 400 ? ? ? A . n A 1 207 GLU 207 401 ? ? ? A . n A 1 208 GLY 208 402 ? ? ? A . n A 1 209 PRO 209 403 ? ? ? A . n A 1 210 MET 210 404 ? ? ? A . n A 1 211 ASN 211 405 ? ? ? A . n A 1 212 VAL 212 406 ? ? ? A . n A 1 213 ASN 213 407 ? ? ? A . n A 1 214 ALA 214 408 ? ? ? A . n A 1 215 ALA 215 409 ? ? ? A . n A 1 216 ALA 216 410 ? ? ? A . n A 1 217 SER 217 411 ? ? ? A . n B 2 1 DG 1 1 1 DG DG B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DC 5 5 5 DC DC B . n B 2 6 DG 6 6 6 DG DG B . n B 2 7 DC 7 7 7 DC DC B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DC 11 11 11 DC DC B . n B 2 12 DC 12 12 12 DC DC B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DG 2 2 2 DG DG C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DC 5 5 5 DC DC C . n C 2 6 DG 6 6 6 DG DG C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DG 8 8 8 DG DG C . n C 2 9 DC 9 9 9 DC DC C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DC 11 11 11 DC DC C . n C 2 12 DC 12 12 12 DC DC C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 PEG 1 501 1 PEG PEG A . E 4 EDO 1 502 3 EDO EDO A . F 3 PEG 1 101 2 PEG PEG C . G 5 HOH 1 601 18 HOH HOH A . G 5 HOH 2 602 39 HOH HOH A . G 5 HOH 3 603 4 HOH HOH A . G 5 HOH 4 604 16 HOH HOH A . G 5 HOH 5 605 31 HOH HOH A . G 5 HOH 6 606 25 HOH HOH A . G 5 HOH 7 607 50 HOH HOH A . G 5 HOH 8 608 6 HOH HOH A . G 5 HOH 9 609 28 HOH HOH A . G 5 HOH 10 610 19 HOH HOH A . G 5 HOH 11 611 17 HOH HOH A . G 5 HOH 12 612 37 HOH HOH A . G 5 HOH 13 613 21 HOH HOH A . G 5 HOH 14 614 13 HOH HOH A . G 5 HOH 15 615 48 HOH HOH A . G 5 HOH 16 616 22 HOH HOH A . G 5 HOH 17 617 33 HOH HOH A . G 5 HOH 18 618 34 HOH HOH A . H 5 HOH 1 101 12 HOH HOH B . H 5 HOH 2 102 49 HOH HOH B . H 5 HOH 3 103 46 HOH HOH B . H 5 HOH 4 104 7 HOH HOH B . H 5 HOH 5 105 5 HOH HOH B . H 5 HOH 6 106 15 HOH HOH B . H 5 HOH 7 107 2 HOH HOH B . H 5 HOH 8 108 11 HOH HOH B . H 5 HOH 9 109 20 HOH HOH B . H 5 HOH 10 110 8 HOH HOH B . I 5 HOH 1 201 3 HOH HOH C . I 5 HOH 2 202 27 HOH HOH C . I 5 HOH 3 203 1 HOH HOH C . I 5 HOH 4 204 26 HOH HOH C . I 5 HOH 5 205 23 HOH HOH C . I 5 HOH 6 206 30 HOH HOH C . I 5 HOH 7 207 24 HOH HOH C . I 5 HOH 8 208 14 HOH HOH C . I 5 HOH 9 209 32 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.15_3459: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 8I6K _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.652 _cell.length_a_esd ? _cell.length_b 40.652 _cell.length_b_esd ? _cell.length_c 138.760 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8I6K _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8I6K _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.93 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M Sodium malonate pH 8.0, 0.1 M Tris pH 8.0, 30% w/v Polyethylene glycol 1000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 289 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 200K' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-04-24 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate 43.94 _reflns.entry_id 8I6K _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 13.07 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9936 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.30 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.8 _reflns.pdbx_netI_over_av_sigmaI 30.50 _reflns.pdbx_netI_over_sigmaI 30.50 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.04245 _reflns.pdbx_Rpim_I_all 0.01866 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.03794 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.486 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.94 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 955 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 0.4225 _reflns_shell.pdbx_Rpim_I_all 0.2234 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.864 _reflns_shell.pdbx_CC_star 0.963 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.3563 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8I6K _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.400 _refine.ls_d_res_low 13.07 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9932 _refine.ls_number_reflns_R_free 487 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.91 _refine.ls_percent_reflns_R_free 4.90 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2020 _refine.ls_R_factor_R_free 0.2531 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1993 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.98 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.70 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.35 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.400 _refine_hist.d_res_low 13.07 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 2004 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1463 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 ? 2047 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.330 ? 2842 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 17.599 ? 1152 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.073 ? 322 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 269 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.4003 2.4855 . . 50 905 100.00 . . . . 0.3245 . . . . . . . . . . . 0.3663 'X-RAY DIFFRACTION' 2.4855 2.5843 . . 48 954 100.00 . . . . 0.2982 . . . . . . . . . . . 0.3565 'X-RAY DIFFRACTION' 2.5843 2.7010 . . 50 982 100.00 . . . . 0.2882 . . . . . . . . . . . 0.3490 # _struct.entry_id 8I6K _struct.title 'Structure of hMNDA HIN with dsDNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8I6K _struct_keywords.text 'complex, DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA complex' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 5 ? H N N 5 ? I N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MNDA_HUMAN P41218 ? 1 ;QVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATVASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVM EIKEASSVSDFNQNFEVPNRIIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIKAKKNKEGPMNVN ; 199 2 PDB 8I6K 8I6K ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8I6K A 5 ? 213 ? P41218 199 ? 407 ? 199 407 2 2 8I6K B 1 ? 12 ? 8I6K 1 ? 12 ? 1 12 3 2 8I6K C 1 ? 12 ? 8I6K 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8I6K GLY A 1 ? UNP P41218 ? ? 'expression tag' 195 1 1 8I6K SER A 2 ? UNP P41218 ? ? 'expression tag' 196 2 1 8I6K VAL A 3 ? UNP P41218 ? ? 'expression tag' 197 3 1 8I6K ASP A 4 ? UNP P41218 ? ? 'expression tag' 198 4 1 8I6K ALA A 214 ? UNP P41218 ? ? 'expression tag' 408 5 1 8I6K ALA A 215 ? UNP P41218 ? ? 'expression tag' 409 6 1 8I6K ALA A 216 ? UNP P41218 ? ? 'expression tag' 410 7 1 8I6K SER A 217 ? UNP P41218 ? ? 'expression tag' 411 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2490 ? 1 MORE -10 ? 1 'SSA (A^2)' 13900 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 59 ? LYS A 63 ? ASP A 253 LYS A 257 5 ? 5 HELX_P HELX_P2 AA2 GLU A 88 ? SER A 90 ? GLU A 282 SER A 284 5 ? 3 HELX_P HELX_P3 AA3 PRO A 102 ? LYS A 111 ? PRO A 296 LYS A 305 1 ? 10 HELX_P HELX_P4 AA4 LYS A 114 ? TYR A 119 ? LYS A 308 TYR A 313 1 ? 6 HELX_P HELX_P5 AA5 LYS A 161 ? HIS A 163 ? LYS A 355 HIS A 357 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 C DC 12 N3 ? ? B DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 C DC 12 O2 ? ? B DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 C DC 12 N4 ? ? B DG 1 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? B DG 2 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N1 ? ? ? 1_555 C DC 9 N3 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 N2 ? ? ? 1_555 C DC 9 O2 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 4 O6 ? ? ? 1_555 C DC 9 N4 ? ? B DG 4 C DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 5 C DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DG 6 N1 ? ? ? 1_555 C DC 7 N3 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 6 N2 ? ? ? 1_555 C DC 7 O2 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 6 O6 ? ? ? 1_555 C DC 7 N4 ? ? B DG 6 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DC 7 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 7 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 7 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 7 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 7 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 7 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 3 N3 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 3 O2 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 3 N4 ? ? B DG 10 C DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DC 12 N3 ? ? ? 1_555 C DG 1 N1 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DC 12 N4 ? ? ? 1_555 C DG 1 O6 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DC 12 O2 ? ? ? 1_555 C DG 1 N2 ? ? B DC 12 C DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 29 ? TYR A 31 ? PHE A 223 TYR A 225 AA1 2 SER A 39 ? ALA A 47 ? SER A 233 ALA A 241 AA1 3 TYR A 52 ? VAL A 57 ? TYR A 246 VAL A 251 AA1 4 VAL A 83 ? ILE A 86 ? VAL A 277 ILE A 280 AA1 5 SER A 78 ? CYS A 80 ? SER A 272 CYS A 274 AA2 1 PHE A 29 ? TYR A 31 ? PHE A 223 TYR A 225 AA2 2 SER A 39 ? ALA A 47 ? SER A 233 ALA A 241 AA2 3 VAL A 18 ? ALA A 25 ? VAL A 212 ALA A 219 AA2 4 VAL A 71 ? ILE A 74 ? VAL A 265 ILE A 268 AA2 5 VAL A 92 ? ASP A 94 ? VAL A 286 ASP A 288 AA3 1 PHE A 196 ? ILE A 200 ? PHE A 390 ILE A 394 AA3 2 LYS A 172 ? VAL A 183 ? LYS A 366 VAL A 377 AA3 3 LYS A 186 ? VAL A 190 ? LYS A 380 VAL A 384 AA3 4 GLY A 152 ? SER A 159 ? GLY A 346 SER A 353 AA3 5 ASN A 142 ? ASP A 149 ? ASN A 336 ASP A 343 AA3 6 MET A 126 ? VAL A 138 ? MET A 320 VAL A 332 AA3 7 LYS A 172 ? VAL A 183 ? LYS A 366 VAL A 377 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 29 ? N PHE A 223 O MET A 41 ? O MET A 235 AA1 2 3 N VAL A 46 ? N VAL A 240 O PHE A 53 ? O PHE A 247 AA1 3 4 N LYS A 56 ? N LYS A 250 O MET A 84 ? O MET A 278 AA1 4 5 O GLU A 85 ? O GLU A 279 N SER A 78 ? N SER A 272 AA2 1 2 N PHE A 29 ? N PHE A 223 O MET A 41 ? O MET A 235 AA2 2 3 O THR A 45 ? O THR A 239 N LEU A 23 ? N LEU A 217 AA2 3 4 N VAL A 18 ? N VAL A 212 O ILE A 74 ? O ILE A 268 AA2 4 5 N THR A 73 ? N THR A 267 O SER A 93 ? O SER A 287 AA3 1 2 O LYS A 198 ? O LYS A 392 N ARG A 174 ? N ARG A 368 AA3 2 3 N VAL A 183 ? N VAL A 377 O LYS A 186 ? O LYS A 380 AA3 3 4 O LEU A 189 ? O LEU A 383 N VAL A 157 ? N VAL A 351 AA3 4 5 O MET A 154 ? O MET A 348 N ILE A 147 ? N ILE A 341 AA3 5 6 O GLU A 146 ? O GLU A 340 N LYS A 135 ? N LYS A 329 AA3 6 7 N PHE A 131 ? N PHE A 325 O LEU A 173 ? O LEU A 367 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DG 4 ? ? "C3'" C DG 4 ? ? 1.381 1.419 -0.038 0.006 N 2 1 "O3'" C DC 7 ? ? P C DG 8 ? ? 1.501 1.607 -0.106 0.012 Y 3 1 "O3'" C DC 9 ? ? P C DG 10 ? ? 1.472 1.607 -0.135 0.012 Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A PHE 247 ? ? CA A PHE 247 ? ? C A PHE 247 ? ? 98.39 110.40 -12.01 2.00 N 2 1 NE A ARG 298 ? ? CZ A ARG 298 ? ? NH1 A ARG 298 ? ? 117.23 120.30 -3.07 0.50 N 3 1 NE A ARG 298 ? ? CZ A ARG 298 ? ? NH2 A ARG 298 ? ? 123.80 120.30 3.50 0.50 N 4 1 "O4'" B DG 2 ? ? "C1'" B DG 2 ? ? N9 B DG 2 ? ? 111.53 108.30 3.23 0.30 N 5 1 "O4'" B DG 4 ? ? "C1'" B DG 4 ? ? N9 B DG 4 ? ? 111.15 108.30 2.85 0.30 N 6 1 "O4'" B DG 6 ? ? "C1'" B DG 6 ? ? N9 B DG 6 ? ? 113.22 108.30 4.92 0.30 N 7 1 "O5'" B DC 7 ? ? P B DC 7 ? ? OP1 B DC 7 ? ? 98.06 105.70 -7.64 0.90 N 8 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 102.95 108.00 -5.05 0.70 N 9 1 "O4'" C DG 1 ? ? "C1'" C DG 1 ? ? N9 C DG 1 ? ? 110.66 108.30 2.36 0.30 N 10 1 "O4'" C DG 4 ? ? "C1'" C DG 4 ? ? N9 C DG 4 ? ? 110.65 108.30 2.35 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 233 ? ? -139.42 -157.28 2 1 PHE A 260 ? ? -105.65 62.42 3 1 LYS A 263 ? ? 82.09 -10.42 4 1 CYS A 274 ? ? -171.79 118.41 5 1 SER A 284 ? ? -58.72 -9.31 6 1 GLN A 291 ? ? -68.57 -176.96 7 1 HIS A 333 ? ? -117.53 -156.53 # _pdbx_entry_details.entry_id 8I6K _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 195 ? A GLY 1 2 1 Y 1 A SER 196 ? A SER 2 3 1 Y 1 A VAL 197 ? A VAL 3 4 1 Y 1 A ASP 198 ? A ASP 4 5 1 Y 1 A GLN 199 ? A GLN 5 6 1 Y 1 A VAL 200 ? A VAL 6 7 1 Y 1 A ASP 201 ? A ASP 7 8 1 Y 1 A ALA 202 ? A ALA 8 9 1 Y 1 A ARG 203 ? A ARG 9 10 1 Y 1 A ARG 204 ? A ARG 10 11 1 Y 1 A ASN 205 ? A ASN 11 12 1 Y 1 A VAL 206 ? A VAL 12 13 1 Y 1 A PRO 207 ? A PRO 13 14 1 Y 1 A GLN 208 ? A GLN 14 15 1 Y 1 A ASN 209 ? A ASN 15 16 1 Y 1 A PRO 228 ? A PRO 34 17 1 Y 1 A GLU 229 ? A GLU 35 18 1 Y 1 A ASN 230 ? A ASN 36 19 1 Y 1 A ALA 396 ? A ALA 202 20 1 Y 1 A LYS 397 ? A LYS 203 21 1 Y 1 A LYS 398 ? A LYS 204 22 1 Y 1 A ASN 399 ? A ASN 205 23 1 Y 1 A LYS 400 ? A LYS 206 24 1 Y 1 A GLU 401 ? A GLU 207 25 1 Y 1 A GLY 402 ? A GLY 208 26 1 Y 1 A PRO 403 ? A PRO 209 27 1 Y 1 A MET 404 ? A MET 210 28 1 Y 1 A ASN 405 ? A ASN 211 29 1 Y 1 A VAL 406 ? A VAL 212 30 1 Y 1 A ASN 407 ? A ASN 213 31 1 Y 1 A ALA 408 ? A ALA 214 32 1 Y 1 A ALA 409 ? A ALA 215 33 1 Y 1 A ALA 410 ? A ALA 216 34 1 Y 1 A SER 411 ? A SER 217 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DC OP3 O N N 88 DC P P N N 89 DC OP1 O N N 90 DC OP2 O N N 91 DC "O5'" O N N 92 DC "C5'" C N N 93 DC "C4'" C N R 94 DC "O4'" O N N 95 DC "C3'" C N S 96 DC "O3'" O N N 97 DC "C2'" C N N 98 DC "C1'" C N R 99 DC N1 N N N 100 DC C2 C N N 101 DC O2 O N N 102 DC N3 N N N 103 DC C4 C N N 104 DC N4 N N N 105 DC C5 C N N 106 DC C6 C N N 107 DC HOP3 H N N 108 DC HOP2 H N N 109 DC "H5'" H N N 110 DC "H5''" H N N 111 DC "H4'" H N N 112 DC "H3'" H N N 113 DC "HO3'" H N N 114 DC "H2'" H N N 115 DC "H2''" H N N 116 DC "H1'" H N N 117 DC H41 H N N 118 DC H42 H N N 119 DC H5 H N N 120 DC H6 H N N 121 DG OP3 O N N 122 DG P P N N 123 DG OP1 O N N 124 DG OP2 O N N 125 DG "O5'" O N N 126 DG "C5'" C N N 127 DG "C4'" C N R 128 DG "O4'" O N N 129 DG "C3'" C N S 130 DG "O3'" O N N 131 DG "C2'" C N N 132 DG "C1'" C N R 133 DG N9 N Y N 134 DG C8 C Y N 135 DG N7 N Y N 136 DG C5 C Y N 137 DG C6 C N N 138 DG O6 O N N 139 DG N1 N N N 140 DG C2 C N N 141 DG N2 N N N 142 DG N3 N N N 143 DG C4 C Y N 144 DG HOP3 H N N 145 DG HOP2 H N N 146 DG "H5'" H N N 147 DG "H5''" H N N 148 DG "H4'" H N N 149 DG "H3'" H N N 150 DG "HO3'" H N N 151 DG "H2'" H N N 152 DG "H2''" H N N 153 DG "H1'" H N N 154 DG H8 H N N 155 DG H1 H N N 156 DG H21 H N N 157 DG H22 H N N 158 EDO C1 C N N 159 EDO O1 O N N 160 EDO C2 C N N 161 EDO O2 O N N 162 EDO H11 H N N 163 EDO H12 H N N 164 EDO HO1 H N N 165 EDO H21 H N N 166 EDO H22 H N N 167 EDO HO2 H N N 168 GLN N N N N 169 GLN CA C N S 170 GLN C C N N 171 GLN O O N N 172 GLN CB C N N 173 GLN CG C N N 174 GLN CD C N N 175 GLN OE1 O N N 176 GLN NE2 N N N 177 GLN OXT O N N 178 GLN H H N N 179 GLN H2 H N N 180 GLN HA H N N 181 GLN HB2 H N N 182 GLN HB3 H N N 183 GLN HG2 H N N 184 GLN HG3 H N N 185 GLN HE21 H N N 186 GLN HE22 H N N 187 GLN HXT H N N 188 GLU N N N N 189 GLU CA C N S 190 GLU C C N N 191 GLU O O N N 192 GLU CB C N N 193 GLU CG C N N 194 GLU CD C N N 195 GLU OE1 O N N 196 GLU OE2 O N N 197 GLU OXT O N N 198 GLU H H N N 199 GLU H2 H N N 200 GLU HA H N N 201 GLU HB2 H N N 202 GLU HB3 H N N 203 GLU HG2 H N N 204 GLU HG3 H N N 205 GLU HE2 H N N 206 GLU HXT H N N 207 GLY N N N N 208 GLY CA C N N 209 GLY C C N N 210 GLY O O N N 211 GLY OXT O N N 212 GLY H H N N 213 GLY H2 H N N 214 GLY HA2 H N N 215 GLY HA3 H N N 216 GLY HXT H N N 217 HIS N N N N 218 HIS CA C N S 219 HIS C C N N 220 HIS O O N N 221 HIS CB C N N 222 HIS CG C Y N 223 HIS ND1 N Y N 224 HIS CD2 C Y N 225 HIS CE1 C Y N 226 HIS NE2 N Y N 227 HIS OXT O N N 228 HIS H H N N 229 HIS H2 H N N 230 HIS HA H N N 231 HIS HB2 H N N 232 HIS HB3 H N N 233 HIS HD1 H N N 234 HIS HD2 H N N 235 HIS HE1 H N N 236 HIS HE2 H N N 237 HIS HXT H N N 238 HOH O O N N 239 HOH H1 H N N 240 HOH H2 H N N 241 ILE N N N N 242 ILE CA C N S 243 ILE C C N N 244 ILE O O N N 245 ILE CB C N S 246 ILE CG1 C N N 247 ILE CG2 C N N 248 ILE CD1 C N N 249 ILE OXT O N N 250 ILE H H N N 251 ILE H2 H N N 252 ILE HA H N N 253 ILE HB H N N 254 ILE HG12 H N N 255 ILE HG13 H N N 256 ILE HG21 H N N 257 ILE HG22 H N N 258 ILE HG23 H N N 259 ILE HD11 H N N 260 ILE HD12 H N N 261 ILE HD13 H N N 262 ILE HXT H N N 263 LEU N N N N 264 LEU CA C N S 265 LEU C C N N 266 LEU O O N N 267 LEU CB C N N 268 LEU CG C N N 269 LEU CD1 C N N 270 LEU CD2 C N N 271 LEU OXT O N N 272 LEU H H N N 273 LEU H2 H N N 274 LEU HA H N N 275 LEU HB2 H N N 276 LEU HB3 H N N 277 LEU HG H N N 278 LEU HD11 H N N 279 LEU HD12 H N N 280 LEU HD13 H N N 281 LEU HD21 H N N 282 LEU HD22 H N N 283 LEU HD23 H N N 284 LEU HXT H N N 285 LYS N N N N 286 LYS CA C N S 287 LYS C C N N 288 LYS O O N N 289 LYS CB C N N 290 LYS CG C N N 291 LYS CD C N N 292 LYS CE C N N 293 LYS NZ N N N 294 LYS OXT O N N 295 LYS H H N N 296 LYS H2 H N N 297 LYS HA H N N 298 LYS HB2 H N N 299 LYS HB3 H N N 300 LYS HG2 H N N 301 LYS HG3 H N N 302 LYS HD2 H N N 303 LYS HD3 H N N 304 LYS HE2 H N N 305 LYS HE3 H N N 306 LYS HZ1 H N N 307 LYS HZ2 H N N 308 LYS HZ3 H N N 309 LYS HXT H N N 310 MET N N N N 311 MET CA C N S 312 MET C C N N 313 MET O O N N 314 MET CB C N N 315 MET CG C N N 316 MET SD S N N 317 MET CE C N N 318 MET OXT O N N 319 MET H H N N 320 MET H2 H N N 321 MET HA H N N 322 MET HB2 H N N 323 MET HB3 H N N 324 MET HG2 H N N 325 MET HG3 H N N 326 MET HE1 H N N 327 MET HE2 H N N 328 MET HE3 H N N 329 MET HXT H N N 330 PEG C1 C N N 331 PEG O1 O N N 332 PEG C2 C N N 333 PEG O2 O N N 334 PEG C3 C N N 335 PEG C4 C N N 336 PEG O4 O N N 337 PEG H11 H N N 338 PEG H12 H N N 339 PEG HO1 H N N 340 PEG H21 H N N 341 PEG H22 H N N 342 PEG H31 H N N 343 PEG H32 H N N 344 PEG H41 H N N 345 PEG H42 H N N 346 PEG HO4 H N N 347 PHE N N N N 348 PHE CA C N S 349 PHE C C N N 350 PHE O O N N 351 PHE CB C N N 352 PHE CG C Y N 353 PHE CD1 C Y N 354 PHE CD2 C Y N 355 PHE CE1 C Y N 356 PHE CE2 C Y N 357 PHE CZ C Y N 358 PHE OXT O N N 359 PHE H H N N 360 PHE H2 H N N 361 PHE HA H N N 362 PHE HB2 H N N 363 PHE HB3 H N N 364 PHE HD1 H N N 365 PHE HD2 H N N 366 PHE HE1 H N N 367 PHE HE2 H N N 368 PHE HZ H N N 369 PHE HXT H N N 370 PRO N N N N 371 PRO CA C N S 372 PRO C C N N 373 PRO O O N N 374 PRO CB C N N 375 PRO CG C N N 376 PRO CD C N N 377 PRO OXT O N N 378 PRO H H N N 379 PRO HA H N N 380 PRO HB2 H N N 381 PRO HB3 H N N 382 PRO HG2 H N N 383 PRO HG3 H N N 384 PRO HD2 H N N 385 PRO HD3 H N N 386 PRO HXT H N N 387 SER N N N N 388 SER CA C N S 389 SER C C N N 390 SER O O N N 391 SER CB C N N 392 SER OG O N N 393 SER OXT O N N 394 SER H H N N 395 SER H2 H N N 396 SER HA H N N 397 SER HB2 H N N 398 SER HB3 H N N 399 SER HG H N N 400 SER HXT H N N 401 THR N N N N 402 THR CA C N S 403 THR C C N N 404 THR O O N N 405 THR CB C N R 406 THR OG1 O N N 407 THR CG2 C N N 408 THR OXT O N N 409 THR H H N N 410 THR H2 H N N 411 THR HA H N N 412 THR HB H N N 413 THR HG1 H N N 414 THR HG21 H N N 415 THR HG22 H N N 416 THR HG23 H N N 417 THR HXT H N N 418 TRP N N N N 419 TRP CA C N S 420 TRP C C N N 421 TRP O O N N 422 TRP CB C N N 423 TRP CG C Y N 424 TRP CD1 C Y N 425 TRP CD2 C Y N 426 TRP NE1 N Y N 427 TRP CE2 C Y N 428 TRP CE3 C Y N 429 TRP CZ2 C Y N 430 TRP CZ3 C Y N 431 TRP CH2 C Y N 432 TRP OXT O N N 433 TRP H H N N 434 TRP H2 H N N 435 TRP HA H N N 436 TRP HB2 H N N 437 TRP HB3 H N N 438 TRP HD1 H N N 439 TRP HE1 H N N 440 TRP HE3 H N N 441 TRP HZ2 H N N 442 TRP HZ3 H N N 443 TRP HH2 H N N 444 TRP HXT H N N 445 TYR N N N N 446 TYR CA C N S 447 TYR C C N N 448 TYR O O N N 449 TYR CB C N N 450 TYR CG C Y N 451 TYR CD1 C Y N 452 TYR CD2 C Y N 453 TYR CE1 C Y N 454 TYR CE2 C Y N 455 TYR CZ C Y N 456 TYR OH O N N 457 TYR OXT O N N 458 TYR H H N N 459 TYR H2 H N N 460 TYR HA H N N 461 TYR HB2 H N N 462 TYR HB3 H N N 463 TYR HD1 H N N 464 TYR HD2 H N N 465 TYR HE1 H N N 466 TYR HE2 H N N 467 TYR HH H N N 468 TYR HXT H N N 469 VAL N N N N 470 VAL CA C N S 471 VAL C C N N 472 VAL O O N N 473 VAL CB C N N 474 VAL CG1 C N N 475 VAL CG2 C N N 476 VAL OXT O N N 477 VAL H H N N 478 VAL H2 H N N 479 VAL HA H N N 480 VAL HB H N N 481 VAL HG11 H N N 482 VAL HG12 H N N 483 VAL HG13 H N N 484 VAL HG21 H N N 485 VAL HG22 H N N 486 VAL HG23 H N N 487 VAL HXT H N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 EDO C1 O1 sing N N 157 EDO C1 C2 sing N N 158 EDO C1 H11 sing N N 159 EDO C1 H12 sing N N 160 EDO O1 HO1 sing N N 161 EDO C2 O2 sing N N 162 EDO C2 H21 sing N N 163 EDO C2 H22 sing N N 164 EDO O2 HO2 sing N N 165 GLN N CA sing N N 166 GLN N H sing N N 167 GLN N H2 sing N N 168 GLN CA C sing N N 169 GLN CA CB sing N N 170 GLN CA HA sing N N 171 GLN C O doub N N 172 GLN C OXT sing N N 173 GLN CB CG sing N N 174 GLN CB HB2 sing N N 175 GLN CB HB3 sing N N 176 GLN CG CD sing N N 177 GLN CG HG2 sing N N 178 GLN CG HG3 sing N N 179 GLN CD OE1 doub N N 180 GLN CD NE2 sing N N 181 GLN NE2 HE21 sing N N 182 GLN NE2 HE22 sing N N 183 GLN OXT HXT sing N N 184 GLU N CA sing N N 185 GLU N H sing N N 186 GLU N H2 sing N N 187 GLU CA C sing N N 188 GLU CA CB sing N N 189 GLU CA HA sing N N 190 GLU C O doub N N 191 GLU C OXT sing N N 192 GLU CB CG sing N N 193 GLU CB HB2 sing N N 194 GLU CB HB3 sing N N 195 GLU CG CD sing N N 196 GLU CG HG2 sing N N 197 GLU CG HG3 sing N N 198 GLU CD OE1 doub N N 199 GLU CD OE2 sing N N 200 GLU OE2 HE2 sing N N 201 GLU OXT HXT sing N N 202 GLY N CA sing N N 203 GLY N H sing N N 204 GLY N H2 sing N N 205 GLY CA C sing N N 206 GLY CA HA2 sing N N 207 GLY CA HA3 sing N N 208 GLY C O doub N N 209 GLY C OXT sing N N 210 GLY OXT HXT sing N N 211 HIS N CA sing N N 212 HIS N H sing N N 213 HIS N H2 sing N N 214 HIS CA C sing N N 215 HIS CA CB sing N N 216 HIS CA HA sing N N 217 HIS C O doub N N 218 HIS C OXT sing N N 219 HIS CB CG sing N N 220 HIS CB HB2 sing N N 221 HIS CB HB3 sing N N 222 HIS CG ND1 sing Y N 223 HIS CG CD2 doub Y N 224 HIS ND1 CE1 doub Y N 225 HIS ND1 HD1 sing N N 226 HIS CD2 NE2 sing Y N 227 HIS CD2 HD2 sing N N 228 HIS CE1 NE2 sing Y N 229 HIS CE1 HE1 sing N N 230 HIS NE2 HE2 sing N N 231 HIS OXT HXT sing N N 232 HOH O H1 sing N N 233 HOH O H2 sing N N 234 ILE N CA sing N N 235 ILE N H sing N N 236 ILE N H2 sing N N 237 ILE CA C sing N N 238 ILE CA CB sing N N 239 ILE CA HA sing N N 240 ILE C O doub N N 241 ILE C OXT sing N N 242 ILE CB CG1 sing N N 243 ILE CB CG2 sing N N 244 ILE CB HB sing N N 245 ILE CG1 CD1 sing N N 246 ILE CG1 HG12 sing N N 247 ILE CG1 HG13 sing N N 248 ILE CG2 HG21 sing N N 249 ILE CG2 HG22 sing N N 250 ILE CG2 HG23 sing N N 251 ILE CD1 HD11 sing N N 252 ILE CD1 HD12 sing N N 253 ILE CD1 HD13 sing N N 254 ILE OXT HXT sing N N 255 LEU N CA sing N N 256 LEU N H sing N N 257 LEU N H2 sing N N 258 LEU CA C sing N N 259 LEU CA CB sing N N 260 LEU CA HA sing N N 261 LEU C O doub N N 262 LEU C OXT sing N N 263 LEU CB CG sing N N 264 LEU CB HB2 sing N N 265 LEU CB HB3 sing N N 266 LEU CG CD1 sing N N 267 LEU CG CD2 sing N N 268 LEU CG HG sing N N 269 LEU CD1 HD11 sing N N 270 LEU CD1 HD12 sing N N 271 LEU CD1 HD13 sing N N 272 LEU CD2 HD21 sing N N 273 LEU CD2 HD22 sing N N 274 LEU CD2 HD23 sing N N 275 LEU OXT HXT sing N N 276 LYS N CA sing N N 277 LYS N H sing N N 278 LYS N H2 sing N N 279 LYS CA C sing N N 280 LYS CA CB sing N N 281 LYS CA HA sing N N 282 LYS C O doub N N 283 LYS C OXT sing N N 284 LYS CB CG sing N N 285 LYS CB HB2 sing N N 286 LYS CB HB3 sing N N 287 LYS CG CD sing N N 288 LYS CG HG2 sing N N 289 LYS CG HG3 sing N N 290 LYS CD CE sing N N 291 LYS CD HD2 sing N N 292 LYS CD HD3 sing N N 293 LYS CE NZ sing N N 294 LYS CE HE2 sing N N 295 LYS CE HE3 sing N N 296 LYS NZ HZ1 sing N N 297 LYS NZ HZ2 sing N N 298 LYS NZ HZ3 sing N N 299 LYS OXT HXT sing N N 300 MET N CA sing N N 301 MET N H sing N N 302 MET N H2 sing N N 303 MET CA C sing N N 304 MET CA CB sing N N 305 MET CA HA sing N N 306 MET C O doub N N 307 MET C OXT sing N N 308 MET CB CG sing N N 309 MET CB HB2 sing N N 310 MET CB HB3 sing N N 311 MET CG SD sing N N 312 MET CG HG2 sing N N 313 MET CG HG3 sing N N 314 MET SD CE sing N N 315 MET CE HE1 sing N N 316 MET CE HE2 sing N N 317 MET CE HE3 sing N N 318 MET OXT HXT sing N N 319 PEG C1 O1 sing N N 320 PEG C1 C2 sing N N 321 PEG C1 H11 sing N N 322 PEG C1 H12 sing N N 323 PEG O1 HO1 sing N N 324 PEG C2 O2 sing N N 325 PEG C2 H21 sing N N 326 PEG C2 H22 sing N N 327 PEG O2 C3 sing N N 328 PEG C3 C4 sing N N 329 PEG C3 H31 sing N N 330 PEG C3 H32 sing N N 331 PEG C4 O4 sing N N 332 PEG C4 H41 sing N N 333 PEG C4 H42 sing N N 334 PEG O4 HO4 sing N N 335 PHE N CA sing N N 336 PHE N H sing N N 337 PHE N H2 sing N N 338 PHE CA C sing N N 339 PHE CA CB sing N N 340 PHE CA HA sing N N 341 PHE C O doub N N 342 PHE C OXT sing N N 343 PHE CB CG sing N N 344 PHE CB HB2 sing N N 345 PHE CB HB3 sing N N 346 PHE CG CD1 doub Y N 347 PHE CG CD2 sing Y N 348 PHE CD1 CE1 sing Y N 349 PHE CD1 HD1 sing N N 350 PHE CD2 CE2 doub Y N 351 PHE CD2 HD2 sing N N 352 PHE CE1 CZ doub Y N 353 PHE CE1 HE1 sing N N 354 PHE CE2 CZ sing Y N 355 PHE CE2 HE2 sing N N 356 PHE CZ HZ sing N N 357 PHE OXT HXT sing N N 358 PRO N CA sing N N 359 PRO N CD sing N N 360 PRO N H sing N N 361 PRO CA C sing N N 362 PRO CA CB sing N N 363 PRO CA HA sing N N 364 PRO C O doub N N 365 PRO C OXT sing N N 366 PRO CB CG sing N N 367 PRO CB HB2 sing N N 368 PRO CB HB3 sing N N 369 PRO CG CD sing N N 370 PRO CG HG2 sing N N 371 PRO CG HG3 sing N N 372 PRO CD HD2 sing N N 373 PRO CD HD3 sing N N 374 PRO OXT HXT sing N N 375 SER N CA sing N N 376 SER N H sing N N 377 SER N H2 sing N N 378 SER CA C sing N N 379 SER CA CB sing N N 380 SER CA HA sing N N 381 SER C O doub N N 382 SER C OXT sing N N 383 SER CB OG sing N N 384 SER CB HB2 sing N N 385 SER CB HB3 sing N N 386 SER OG HG sing N N 387 SER OXT HXT sing N N 388 THR N CA sing N N 389 THR N H sing N N 390 THR N H2 sing N N 391 THR CA C sing N N 392 THR CA CB sing N N 393 THR CA HA sing N N 394 THR C O doub N N 395 THR C OXT sing N N 396 THR CB OG1 sing N N 397 THR CB CG2 sing N N 398 THR CB HB sing N N 399 THR OG1 HG1 sing N N 400 THR CG2 HG21 sing N N 401 THR CG2 HG22 sing N N 402 THR CG2 HG23 sing N N 403 THR OXT HXT sing N N 404 TRP N CA sing N N 405 TRP N H sing N N 406 TRP N H2 sing N N 407 TRP CA C sing N N 408 TRP CA CB sing N N 409 TRP CA HA sing N N 410 TRP C O doub N N 411 TRP C OXT sing N N 412 TRP CB CG sing N N 413 TRP CB HB2 sing N N 414 TRP CB HB3 sing N N 415 TRP CG CD1 doub Y N 416 TRP CG CD2 sing Y N 417 TRP CD1 NE1 sing Y N 418 TRP CD1 HD1 sing N N 419 TRP CD2 CE2 doub Y N 420 TRP CD2 CE3 sing Y N 421 TRP NE1 CE2 sing Y N 422 TRP NE1 HE1 sing N N 423 TRP CE2 CZ2 sing Y N 424 TRP CE3 CZ3 doub Y N 425 TRP CE3 HE3 sing N N 426 TRP CZ2 CH2 doub Y N 427 TRP CZ2 HZ2 sing N N 428 TRP CZ3 CH2 sing Y N 429 TRP CZ3 HZ3 sing N N 430 TRP CH2 HH2 sing N N 431 TRP OXT HXT sing N N 432 TYR N CA sing N N 433 TYR N H sing N N 434 TYR N H2 sing N N 435 TYR CA C sing N N 436 TYR CA CB sing N N 437 TYR CA HA sing N N 438 TYR C O doub N N 439 TYR C OXT sing N N 440 TYR CB CG sing N N 441 TYR CB HB2 sing N N 442 TYR CB HB3 sing N N 443 TYR CG CD1 doub Y N 444 TYR CG CD2 sing Y N 445 TYR CD1 CE1 sing Y N 446 TYR CD1 HD1 sing N N 447 TYR CD2 CE2 doub Y N 448 TYR CD2 HD2 sing N N 449 TYR CE1 CZ doub Y N 450 TYR CE1 HE1 sing N N 451 TYR CE2 CZ sing Y N 452 TYR CE2 HE2 sing N N 453 TYR CZ OH sing N N 454 TYR OH HH sing N N 455 TYR OXT HXT sing N N 456 VAL N CA sing N N 457 VAL N H sing N N 458 VAL N H2 sing N N 459 VAL CA C sing N N 460 VAL CA CB sing N N 461 VAL CA HA sing N N 462 VAL C O doub N N 463 VAL C OXT sing N N 464 VAL CB CG1 sing N N 465 VAL CB CG2 sing N N 466 VAL CB HB sing N N 467 VAL CG1 HG11 sing N N 468 VAL CG1 HG12 sing N N 469 VAL CG1 HG13 sing N N 470 VAL CG2 HG21 sing N N 471 VAL CG2 HG22 sing N N 472 VAL CG2 HG23 sing N N 473 VAL OXT HXT sing N N 474 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8I6K 'double helix' 8I6K 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 C DC 12 1_555 -0.210 -0.078 -0.213 -7.562 -8.106 6.360 1 B_DG1:DC12_C B 1 ? C 12 ? 19 1 1 B DG 2 1_555 C DC 11 1_555 -0.331 -0.131 0.109 6.766 -8.508 3.011 2 B_DG2:DC11_C B 2 ? C 11 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.093 -0.308 0.266 -1.931 -9.687 -2.714 3 B_DC3:DG10_C B 3 ? C 10 ? 19 1 1 B DG 4 1_555 C DC 9 1_555 -0.514 -0.506 -0.223 -2.864 -3.643 -5.250 4 B_DG4:DC9_C B 4 ? C 9 ? 19 1 1 B DC 5 1_555 C DG 8 1_555 0.239 -0.289 0.068 1.856 -7.183 -0.901 5 B_DC5:DG8_C B 5 ? C 8 ? 19 1 1 B DG 6 1_555 C DC 7 1_555 -0.323 -0.151 0.129 10.387 -2.789 0.868 6 B_DG6:DC7_C B 6 ? C 7 ? 19 1 1 B DC 7 1_555 C DG 6 1_555 0.112 -0.166 0.170 4.907 -9.113 1.701 7 B_DC7:DG6_C B 7 ? C 6 ? 19 1 1 B DG 8 1_555 C DC 5 1_555 0.013 -0.247 0.355 1.392 -11.427 -0.700 8 B_DG8:DC5_C B 8 ? C 5 ? 19 1 1 B DC 9 1_555 C DG 4 1_555 0.172 -0.271 -0.047 6.066 -3.761 0.449 9 B_DC9:DG4_C B 9 ? C 4 ? 19 1 1 B DG 10 1_555 C DC 3 1_555 -0.235 -0.139 0.213 8.040 -6.826 -0.225 10 B_DG10:DC3_C B 10 ? C 3 ? 19 1 1 B DC 11 1_555 C DG 2 1_555 0.113 -0.352 0.272 3.951 -7.602 -1.881 11 B_DC11:DG2_C B 11 ? C 2 ? 19 1 1 B DC 12 1_555 C DG 1 1_555 0.363 -0.586 0.271 -14.383 -4.898 -1.158 12 B_DC12:DG1_C B 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 C DC 12 1_555 B DG 2 1_555 C DC 11 1_555 0.115 0.116 3.010 -3.920 7.796 26.134 -1.521 -1.128 2.876 16.660 8.376 27.528 1 BB_DG1DG2:DC11DC12_CC B 1 ? C 12 ? B 2 ? C 11 ? 1 B DG 2 1_555 C DC 11 1_555 B DC 3 1_555 C DG 10 1_555 -1.223 0.220 3.560 -3.376 -6.235 40.963 1.037 1.330 3.576 -8.829 4.780 41.546 2 BB_DG2DC3:DG10DC11_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DG 4 1_555 C DC 9 1_555 1.057 1.005 3.446 4.156 3.519 34.896 1.090 -1.075 3.625 5.825 -6.878 35.306 3 BB_DC3DG4:DC9DG10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B DG 4 1_555 C DC 9 1_555 B DC 5 1_555 C DG 8 1_555 -0.591 0.528 3.220 -2.386 -1.755 38.882 1.000 0.602 3.223 -2.632 3.579 38.990 4 BB_DG4DC5:DG8DC9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DC 5 1_555 C DG 8 1_555 B DG 6 1_555 C DC 7 1_555 1.493 0.550 3.215 2.272 4.747 29.055 0.056 -2.440 3.365 9.365 -4.483 29.518 5 BB_DC5DG6:DC7DG8_CC B 5 ? C 8 ? B 6 ? C 7 ? 1 B DG 6 1_555 C DC 7 1_555 B DC 7 1_555 C DG 6 1_555 -0.958 0.193 3.452 -1.149 -2.468 39.277 0.595 1.278 3.459 -3.666 1.707 39.368 6 BB_DG6DC7:DG6DC7_CC B 6 ? C 7 ? B 7 ? C 6 ? 1 B DC 7 1_555 C DG 6 1_555 B DG 8 1_555 C DC 5 1_555 -0.541 0.527 3.436 -1.328 4.156 38.594 0.254 0.642 3.488 6.264 2.001 38.830 7 BB_DC7DG8:DC5DG6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DC 9 1_555 C DG 4 1_555 0.966 1.387 3.349 5.107 -3.043 35.437 2.696 -0.816 3.325 -4.957 -8.317 35.916 8 BB_DG8DC9:DG4DC5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DC 9 1_555 C DG 4 1_555 B DG 10 1_555 C DC 3 1_555 -0.634 1.501 3.308 -3.987 2.962 33.933 2.062 0.423 3.473 5.042 6.787 34.284 9 BB_DC9DG10:DC3DG4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DG 10 1_555 C DC 3 1_555 B DC 11 1_555 C DG 2 1_555 0.633 -0.543 3.458 -0.315 -0.646 36.747 -0.768 -1.050 3.461 -1.024 0.499 36.754 10 BB_DG10DC11:DG2DC3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DC 11 1_555 C DG 2 1_555 B DC 12 1_555 C DG 1 1_555 0.750 -0.771 3.731 3.316 -2.837 39.465 -0.752 -0.656 3.823 -4.186 -4.893 39.696 11 BB_DC11DC12:DG1DG2_CC B 11 ? C 2 ? B 12 ? C 1 ? # _pdbx_audit_support.funding_organization 'Chinese Academy of Sciences' _pdbx_audit_support.country China _pdbx_audit_support.grant_number XDPB29030104 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 EDO ? ? EDO ? ? 'SUBJECT OF INVESTIGATION' ? 2 PEG ? ? PEG ? ? 'SUBJECT OF INVESTIGATION' ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5YZP _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8I6K _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.024599 _atom_sites.fract_transf_matrix[1][2] 0.014202 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028404 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007207 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_