HEADER ANTIVIRAL PROTEIN 09-FEB-23 8IB1 TITLE STRUCTURE OF THE LAH31 FAB BOUND TO AN INFLUENZA VIRUS HA EPITOPE TITLE 2 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LAH31 FAB LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LAH31 FAB HEAVY CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: HEMAGGLUTININ HA2 CHAIN; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 16 ORGANISM_TAXID: 11320 KEYWDS ANTIBODY, FAB, INFLUENZA, EPITOPE, ANTIVIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.SUZUKI,T.HASHIGUCHI REVDAT 2 30-AUG-23 8IB1 1 JRNL REVDAT 1 26-JUL-23 8IB1 0 JRNL AUTH K.TONOUCHI,Y.ADACHI,T.SUZUKI,D.KURODA,A.NISHIYAMA,K.YUMOTO, JRNL AUTH 2 H.TAKEYAMA,T.SUZUKI,T.HASHIGUCHI,Y.TAKAHASHI JRNL TITL STRUCTURAL BASIS FOR CROSS-GROUP RECOGNITION OF AN INFLUENZA JRNL TITL 2 VIRUS HEMAGGLUTININ ANTIBODY THAT TARGETS POSTFUSION JRNL TITL 3 STABILIZED EPITOPE. JRNL REF PLOS PATHOG. V. 19 11554 2023 JRNL REFN ESSN 1553-7374 JRNL PMID 37556494 JRNL DOI 10.1371/JOURNAL.PPAT.1011554 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.830 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 73864 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3722 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9800 - 5.8300 0.99 2652 133 0.1950 0.2246 REMARK 3 2 5.8300 - 4.6300 1.00 2628 154 0.1596 0.2133 REMARK 3 3 4.6300 - 4.0500 1.00 2641 133 0.1440 0.1439 REMARK 3 4 4.0500 - 3.6800 1.00 2644 154 0.1556 0.2232 REMARK 3 5 3.6800 - 3.4100 1.00 2662 123 0.1518 0.1721 REMARK 3 6 3.4100 - 3.2100 1.00 2640 137 0.1649 0.2010 REMARK 3 7 3.2100 - 3.0500 1.00 2631 175 0.1684 0.2279 REMARK 3 8 3.0500 - 2.9200 1.00 2656 133 0.1748 0.2375 REMARK 3 9 2.9200 - 2.8100 1.00 2647 133 0.1861 0.2217 REMARK 3 10 2.8100 - 2.7100 1.00 2647 135 0.1794 0.2210 REMARK 3 11 2.7100 - 2.6200 0.99 2636 115 0.1927 0.2182 REMARK 3 12 2.6200 - 2.5500 1.00 2652 147 0.2013 0.2466 REMARK 3 13 2.5500 - 2.4800 1.00 2621 159 0.1976 0.2613 REMARK 3 14 2.4800 - 2.4200 1.00 2672 142 0.1989 0.2521 REMARK 3 15 2.4200 - 2.3700 1.00 2620 144 0.1992 0.2519 REMARK 3 16 2.3700 - 2.3200 1.00 2669 136 0.1954 0.2578 REMARK 3 17 2.3200 - 2.2700 1.00 2624 142 0.1983 0.2076 REMARK 3 18 2.2700 - 2.2300 1.00 2692 128 0.2080 0.2599 REMARK 3 19 2.2300 - 2.1900 1.00 2626 132 0.2135 0.2490 REMARK 3 20 2.1900 - 2.1500 1.00 2653 132 0.2080 0.2269 REMARK 3 21 2.1500 - 2.1200 1.00 2646 123 0.2168 0.2458 REMARK 3 22 2.1200 - 2.0800 0.99 2618 149 0.2357 0.3263 REMARK 3 23 2.0800 - 2.0500 0.97 2596 122 0.2532 0.2747 REMARK 3 24 2.0500 - 2.0200 0.95 2525 131 0.2840 0.2903 REMARK 3 25 2.0200 - 2.0000 0.94 2465 157 0.2993 0.3306 REMARK 3 26 2.0000 - 1.9700 0.91 2392 155 0.3009 0.3484 REMARK 3 27 1.9700 - 1.9500 0.76 1987 98 0.3108 0.3688 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.221 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.451 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 3443 REMARK 3 ANGLE : 0.763 4677 REMARK 3 CHIRALITY : 0.052 534 REMARK 3 PLANARITY : 0.007 600 REMARK 3 DIHEDRAL : 13.412 1245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8450 11.7206 46.3095 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.2288 REMARK 3 T33: 0.4672 T12: 0.0191 REMARK 3 T13: -0.0092 T23: -0.0432 REMARK 3 L TENSOR REMARK 3 L11: 1.5948 L22: 3.0157 REMARK 3 L33: 1.7057 L12: 0.6923 REMARK 3 L13: 0.6632 L23: 0.9158 REMARK 3 S TENSOR REMARK 3 S11: 0.2453 S12: 0.0815 S13: -0.5152 REMARK 3 S21: 0.2414 S22: -0.1964 S23: -0.1975 REMARK 3 S31: 0.1452 S32: -0.0647 S33: -0.0200 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 44 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.2837 10.0683 45.8121 REMARK 3 T TENSOR REMARK 3 T11: 0.1532 T22: 0.1460 REMARK 3 T33: 0.3215 T12: 0.0040 REMARK 3 T13: -0.0252 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 3.1521 L22: 0.7244 REMARK 3 L33: 1.1701 L12: 0.8703 REMARK 3 L13: 0.8854 L23: -0.2518 REMARK 3 S TENSOR REMARK 3 S11: 0.0956 S12: 0.2491 S13: -0.3173 REMARK 3 S21: -0.0847 S22: -0.0263 S23: -0.2319 REMARK 3 S31: 0.0358 S32: 0.0837 S33: -0.0714 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4567 20.1279 42.9945 REMARK 3 T TENSOR REMARK 3 T11: 0.1458 T22: 0.1918 REMARK 3 T33: 0.3693 T12: 0.0129 REMARK 3 T13: 0.0134 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 4.4575 L22: 3.3225 REMARK 3 L33: 2.9866 L12: 1.2973 REMARK 3 L13: 0.6394 L23: -0.2790 REMARK 3 S TENSOR REMARK 3 S11: 0.0413 S12: 0.2556 S13: 0.4479 REMARK 3 S21: 0.0748 S22: 0.0982 S23: -0.0234 REMARK 3 S31: -0.2549 S32: 0.1442 S33: -0.0467 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1877 14.5212 47.8359 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.1419 REMARK 3 T33: 0.3178 T12: 0.0193 REMARK 3 T13: 0.0016 T23: -0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.4146 L22: 1.1517 REMARK 3 L33: 0.6357 L12: 1.1573 REMARK 3 L13: 0.1269 L23: -0.0430 REMARK 3 S TENSOR REMARK 3 S11: 0.0649 S12: 0.1193 S13: -0.3847 REMARK 3 S21: -0.1081 S22: 0.0158 S23: -0.1213 REMARK 3 S31: 0.0458 S32: -0.0074 S33: -0.0975 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.1414 22.5169 76.0053 REMARK 3 T TENSOR REMARK 3 T11: 0.2348 T22: 0.2216 REMARK 3 T33: 0.2660 T12: 0.0460 REMARK 3 T13: -0.0563 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 2.4681 L22: 1.6957 REMARK 3 L33: 5.9573 L12: 0.0336 REMARK 3 L13: -0.6679 L23: -0.7573 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: -0.2383 S13: -0.0683 REMARK 3 S21: 0.2784 S22: 0.0939 S23: -0.1870 REMARK 3 S31: 0.4187 S32: 0.4725 S33: -0.0470 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.4847 21.1029 74.8306 REMARK 3 T TENSOR REMARK 3 T11: 0.2565 T22: 0.3387 REMARK 3 T33: 0.2967 T12: 0.0930 REMARK 3 T13: -0.0357 T23: -0.0500 REMARK 3 L TENSOR REMARK 3 L11: 1.7383 L22: 1.6280 REMARK 3 L33: 4.8641 L12: -0.3542 REMARK 3 L13: 0.6784 L23: -0.0627 REMARK 3 S TENSOR REMARK 3 S11: -0.0318 S12: -0.0694 S13: 0.0302 REMARK 3 S21: 0.3538 S22: 0.1525 S23: -0.2348 REMARK 3 S31: 0.3763 S32: 0.8047 S33: -0.0978 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1411 5.3282 62.3720 REMARK 3 T TENSOR REMARK 3 T11: 0.1863 T22: 0.1643 REMARK 3 T33: 0.3467 T12: -0.0446 REMARK 3 T13: -0.0294 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 1.0255 L22: 1.0029 REMARK 3 L33: 2.1330 L12: -0.4763 REMARK 3 L13: 0.8195 L23: -0.5600 REMARK 3 S TENSOR REMARK 3 S11: 0.0998 S12: -0.0713 S13: -0.2226 REMARK 3 S21: 0.1808 S22: 0.0006 S23: 0.0876 REMARK 3 S31: 0.0602 S32: -0.0735 S33: -0.1219 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 137 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1451 18.7494 79.0093 REMARK 3 T TENSOR REMARK 3 T11: 0.2523 T22: 0.1852 REMARK 3 T33: 0.2480 T12: 0.0077 REMARK 3 T13: 0.0572 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.1871 L22: 2.6573 REMARK 3 L33: 2.8632 L12: -0.4386 REMARK 3 L13: 1.3283 L23: 0.6185 REMARK 3 S TENSOR REMARK 3 S11: 0.1865 S12: -0.1392 S13: -0.0802 REMARK 3 S21: 0.5100 S22: 0.0725 S23: -0.1595 REMARK 3 S31: 0.2277 S32: 0.0001 S33: -0.2249 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.1343 23.4700 74.7738 REMARK 3 T TENSOR REMARK 3 T11: 0.2119 T22: 0.1613 REMARK 3 T33: 0.2334 T12: -0.0265 REMARK 3 T13: 0.0171 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 2.2174 L22: 1.3420 REMARK 3 L33: 2.8226 L12: -0.3704 REMARK 3 L13: 0.3635 L23: 0.3083 REMARK 3 S TENSOR REMARK 3 S11: 0.0703 S12: -0.0258 S13: 0.2423 REMARK 3 S21: 0.0470 S22: -0.0804 S23: 0.1438 REMARK 3 S31: 0.2564 S32: -0.1223 S33: 0.0304 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 223 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9874 29.2002 81.6865 REMARK 3 T TENSOR REMARK 3 T11: 0.2580 T22: 0.2674 REMARK 3 T33: 0.3155 T12: -0.0195 REMARK 3 T13: 0.0615 T23: -0.0911 REMARK 3 L TENSOR REMARK 3 L11: 4.1355 L22: 8.8506 REMARK 3 L33: 4.4098 L12: 2.4389 REMARK 3 L13: -0.3709 L23: 0.4694 REMARK 3 S TENSOR REMARK 3 S11: 0.2479 S12: -0.1945 S13: 0.6922 REMARK 3 S21: 0.9052 S22: -0.3681 S23: 0.8566 REMARK 3 S31: 0.1552 S32: -0.4439 S33: 0.0794 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 5 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0730 -1.6385 45.4150 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.2455 REMARK 3 T33: 0.5785 T12: -0.0239 REMARK 3 T13: -0.1416 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 7.8855 L22: 2.0002 REMARK 3 L33: 3.8281 L12: 9.1334 REMARK 3 L13: -5.1178 L23: -5.8301 REMARK 3 S TENSOR REMARK 3 S11: -0.3689 S12: 0.4690 S13: -0.1905 REMARK 3 S21: -0.5242 S22: 0.1155 S23: -0.9093 REMARK 3 S31: 0.3453 S32: 0.1360 S33: 0.1225 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 6 THROUGH 13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0228 4.0687 45.5893 REMARK 3 T TENSOR REMARK 3 T11: 0.1651 T22: 0.2716 REMARK 3 T33: 0.4497 T12: -0.0118 REMARK 3 T13: -0.0803 T23: 0.0361 REMARK 3 L TENSOR REMARK 3 L11: 1.0380 L22: 5.8895 REMARK 3 L33: 9.6572 L12: 2.4092 REMARK 3 L13: -0.0367 L23: 1.2107 REMARK 3 S TENSOR REMARK 3 S11: 0.0900 S12: 0.1436 S13: -0.7183 REMARK 3 S21: -0.1203 S22: -0.0957 S23: 0.1998 REMARK 3 S31: 0.2060 S32: -0.7936 S33: -0.1157 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IB1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1300035335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73864 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 45.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6WRP,5WL2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE, AMMONIUM ACETATE, REMARK 280 PEG4000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.02500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.25500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.02500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.25500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 ALA A 3 REMARK 465 MET A 4 REMARK 465 LYS A 5 REMARK 465 ARG A 6 REMARK 465 GLY A 7 REMARK 465 LEU A 8 REMARK 465 CYS A 9 REMARK 465 CYS A 10 REMARK 465 VAL A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 LEU A 14 REMARK 465 CYS A 15 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 VAL A 18 REMARK 465 PHE A 19 REMARK 465 VAL A 20 REMARK 465 SER A 21 REMARK 465 PRO A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 SER A 25 REMARK 465 GLU A 244 REMARK 465 CYS A 245 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 ALA B 3 REMARK 465 MET B 4 REMARK 465 LYS B 5 REMARK 465 ARG B 6 REMARK 465 GLY B 7 REMARK 465 LEU B 8 REMARK 465 CYS B 9 REMARK 465 CYS B 10 REMARK 465 VAL B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 LEU B 14 REMARK 465 CYS B 15 REMARK 465 GLY B 16 REMARK 465 ALA B 17 REMARK 465 VAL B 18 REMARK 465 PHE B 19 REMARK 465 VAL B 20 REMARK 465 SER B 21 REMARK 465 PRO B 22 REMARK 465 SER B 23 REMARK 465 ALA B 24 REMARK 465 SER B 25 REMARK 465 GLN B 26 REMARK 465 LYS B 163 REMARK 465 SER B 164 REMARK 465 THR B 165 REMARK 465 SER B 166 REMARK 465 GLY B 167 REMARK 465 LYS B 248 REMARK 465 SER B 249 REMARK 465 CYS B 250 REMARK 465 ASP B 251 REMARK 465 LYS B 252 REMARK 465 GLY B 253 REMARK 465 SER B 254 REMARK 465 SER B 255 REMARK 465 LEU B 256 REMARK 465 GLU B 257 REMARK 465 VAL B 258 REMARK 465 LEU B 259 REMARK 465 PHE B 260 REMARK 465 GLN B 261 REMARK 465 GLY B 262 REMARK 465 PRO B 263 REMARK 465 LEU B 264 REMARK 465 GLY B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 465 HIS B 270 REMARK 465 HIS B 271 REMARK 465 SER C 14 REMARK 465 GLU C 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 49 O HOH A 301 2.13 REMARK 500 O HOH B 397 O HOH B 419 2.14 REMARK 500 O HOH B 423 O HOH B 432 2.14 REMARK 500 O HOH B 397 O HOH B 437 2.14 REMARK 500 O HOH A 423 O HOH B 420 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG1 THR A 30 OG1 THR A 30 2655 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 82 13.24 -140.28 REMARK 500 LYS A 221 -50.04 -121.24 REMARK 500 ARG A 242 178.48 151.17 REMARK 500 SER B 161 -169.94 140.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 8IB1 A 1 245 PDB 8IB1 8IB1 1 245 DBREF 8IB1 B 1 271 PDB 8IB1 8IB1 1 271 DBREF 8IB1 C 1 15 UNP Q03909 HEMA_I89A7 450 464 SEQRES 1 A 245 MET ASP ALA MET LYS ARG GLY LEU CYS CYS VAL LEU LEU SEQRES 2 A 245 LEU CYS GLY ALA VAL PHE VAL SER PRO SER ALA SER ASP SEQRES 3 A 245 ILE VAL MET THR GLN SER PRO LEU SER LEU PRO VAL ILE SEQRES 4 A 245 PRO GLY GLU PRO ALA SER ILE SER CYS ARG SER SER GLN SEQRES 5 A 245 SER LEU LEU GLN SER ASN GLY ASN ASN TYR LEU ASP TRP SEQRES 6 A 245 TYR LEU GLN LYS PRO GLY GLN SER PRO GLN LEU LEU ILE SEQRES 7 A 245 TYR LEU GLY SER ASN ARG ALA SER GLY VAL PRO ASP ARG SEQRES 8 A 245 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 9 A 245 ILE SER ARG VAL GLU ALA GLU ASP VAL GLY VAL TYR TYR SEQRES 10 A 245 CYS LEU GLN ALA ARG GLN SER SER VAL LEU THR PHE GLY SEQRES 11 A 245 GLY GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA SEQRES 12 A 245 PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU SEQRES 13 A 245 LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN SEQRES 14 A 245 PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP SEQRES 15 A 245 ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR SEQRES 16 A 245 GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER SEQRES 17 A 245 THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS SEQRES 18 A 245 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 19 A 245 PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 B 271 MET ASP ALA MET LYS ARG GLY LEU CYS CYS VAL LEU LEU SEQRES 2 B 271 LEU CYS GLY ALA VAL PHE VAL SER PRO SER ALA SER GLN SEQRES 3 B 271 VAL GLN LEU GLU GLN SER GLY ALA GLU VAL LYS LYS PRO SEQRES 4 B 271 GLY SER SER VAL LYS VAL SER CYS LYS ALA SER GLY PRO SEQRES 5 B 271 MET PHE SER ARG SER ALA PHE SER TRP VAL ARG GLN ALA SEQRES 6 B 271 PRO GLY GLN GLY LEU GLU TRP MET GLY ARG ILE ILE PRO SEQRES 7 B 271 THR VAL ASP LEU LYS ASN TYR ALA GLN LYS PHE GLN GLY SEQRES 8 B 271 ARG VAL THR PHE THR ALA ASP LYS SER THR ALA THR SER SEQRES 9 B 271 TYR MET GLU LEU ARG SER LEU LYS SER GLU ASP THR ALA SEQRES 10 B 271 VAL TYR TYR CYS ALA ARG MET GLY SER GLY SER SER TYR SEQRES 11 B 271 TYR GLY MET ASP VAL TRP GLY LEU GLY THR THR VAL THR SEQRES 12 B 271 VAL SER SER GLY ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 13 B 271 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 14 B 271 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 15 B 271 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 16 B 271 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 17 B 271 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 18 B 271 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 19 B 271 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 20 B 271 LYS SER CYS ASP LYS GLY SER SER LEU GLU VAL LEU PHE SEQRES 21 B 271 GLN GLY PRO LEU GLY HIS HIS HIS HIS HIS HIS SEQRES 1 C 15 VAL ALA LEU GLU ASN GLN HIS THR ILE ASP LEU THR ASP SEQRES 2 C 15 SER GLU FORMUL 4 HOH *304(H2 O) HELIX 1 AA1 GLU A 109 VAL A 113 5 5 HELIX 2 AA2 SER A 152 LYS A 157 1 6 HELIX 3 AA3 LYS A 214 GLU A 218 1 5 HELIX 4 AA4 SER B 50 ARG B 56 1 7 HELIX 5 AA5 PRO B 78 ASP B 81 5 4 HELIX 6 AA6 GLN B 87 GLN B 90 5 4 HELIX 7 AA7 LYS B 112 THR B 116 5 5 HELIX 8 AA8 SER B 126 TYR B 130 5 5 HELIX 9 AA9 SER B 190 ALA B 192 5 3 HELIX 10 AB1 SER B 221 LEU B 223 5 3 HELIX 11 AB2 LYS B 235 ASN B 238 5 4 HELIX 12 AB3 ALA C 2 GLN C 6 1 5 SHEET 1 AA1 4 MET A 29 SER A 32 0 SHEET 2 AA1 4 ALA A 44 SER A 50 -1 O ARG A 49 N THR A 30 SHEET 3 AA1 4 ASP A 100 ILE A 105 -1 O PHE A 101 N CYS A 48 SHEET 4 AA1 4 PHE A 92 SER A 97 -1 N SER A 93 O THR A 104 SHEET 1 AA2 6 SER A 35 VAL A 38 0 SHEET 2 AA2 6 THR A 133 ILE A 137 1 O GLU A 136 N LEU A 36 SHEET 3 AA2 6 GLY A 114 GLN A 123 -1 N TYR A 116 O THR A 133 SHEET 4 AA2 6 LEU A 63 GLN A 68 -1 N TYR A 66 O TYR A 117 SHEET 5 AA2 6 GLN A 75 TYR A 79 -1 O ILE A 78 N TRP A 65 SHEET 6 AA2 6 ASN A 83 ARG A 84 -1 O ASN A 83 N TYR A 79 SHEET 1 AA3 4 SER A 35 VAL A 38 0 SHEET 2 AA3 4 THR A 133 ILE A 137 1 O GLU A 136 N LEU A 36 SHEET 3 AA3 4 GLY A 114 GLN A 123 -1 N TYR A 116 O THR A 133 SHEET 4 AA3 4 VAL A 126 PHE A 129 -1 O THR A 128 N GLN A 120 SHEET 1 AA4 4 SER A 145 PHE A 149 0 SHEET 2 AA4 4 THR A 160 PHE A 170 -1 O LEU A 166 N PHE A 147 SHEET 3 AA4 4 TYR A 204 SER A 213 -1 O LEU A 210 N VAL A 163 SHEET 4 AA4 4 SER A 190 VAL A 194 -1 N GLN A 191 O THR A 209 SHEET 1 AA5 4 ALA A 184 LEU A 185 0 SHEET 2 AA5 4 LYS A 176 VAL A 181 -1 N VAL A 181 O ALA A 184 SHEET 3 AA5 4 VAL A 222 THR A 228 -1 O GLU A 226 N GLN A 178 SHEET 4 AA5 4 VAL A 236 ASN A 241 -1 O VAL A 236 N VAL A 227 SHEET 1 AA6 4 GLU B 30 GLN B 31 0 SHEET 2 AA6 4 VAL B 43 LYS B 48 -1 O LYS B 48 N GLU B 30 SHEET 3 AA6 4 THR B 103 LEU B 108 -1 O MET B 106 N VAL B 45 SHEET 4 AA6 4 VAL B 93 ASP B 98 -1 N THR B 96 O TYR B 105 SHEET 1 AA7 6 GLU B 35 LYS B 37 0 SHEET 2 AA7 6 THR B 140 VAL B 144 1 O THR B 143 N GLU B 35 SHEET 3 AA7 6 ALA B 117 MET B 124 -1 N ALA B 117 O VAL B 142 SHEET 4 AA7 6 ALA B 58 GLN B 64 -1 N VAL B 62 O TYR B 120 SHEET 5 AA7 6 LEU B 70 ILE B 77 -1 O MET B 73 N TRP B 61 SHEET 6 AA7 6 LEU B 82 TYR B 85 -1 O LEU B 82 N ILE B 77 SHEET 1 AA8 4 GLU B 35 LYS B 37 0 SHEET 2 AA8 4 THR B 140 VAL B 144 1 O THR B 143 N GLU B 35 SHEET 3 AA8 4 ALA B 117 MET B 124 -1 N ALA B 117 O VAL B 142 SHEET 4 AA8 4 MET B 133 TRP B 136 -1 O VAL B 135 N ARG B 123 SHEET 1 AA9 4 SER B 154 LEU B 158 0 SHEET 2 AA9 4 THR B 169 TYR B 179 -1 O LEU B 175 N PHE B 156 SHEET 3 AA9 4 TYR B 210 PRO B 219 -1 O LEU B 212 N VAL B 176 SHEET 4 AA9 4 VAL B 197 THR B 199 -1 N HIS B 198 O VAL B 215 SHEET 1 AB1 4 SER B 154 LEU B 158 0 SHEET 2 AB1 4 THR B 169 TYR B 179 -1 O LEU B 175 N PHE B 156 SHEET 3 AB1 4 TYR B 210 PRO B 219 -1 O LEU B 212 N VAL B 176 SHEET 4 AB1 4 VAL B 203 LEU B 204 -1 N VAL B 203 O SER B 211 SHEET 1 AB2 3 THR B 185 TRP B 188 0 SHEET 2 AB2 3 ILE B 229 HIS B 234 -1 O ASN B 231 N SER B 187 SHEET 3 AB2 3 THR B 239 ARG B 244 -1 O VAL B 241 N VAL B 232 SSBOND 1 CYS A 48 CYS A 118 1555 1555 2.05 SSBOND 2 CYS A 165 CYS A 225 1555 1555 2.02 SSBOND 3 CYS B 47 CYS B 121 1555 1555 2.05 SSBOND 4 CYS B 174 CYS B 230 1555 1555 2.05 CISPEP 1 SER A 32 PRO A 33 0 -5.68 CISPEP 2 TYR A 171 PRO A 172 0 -0.94 CISPEP 3 PHE B 180 PRO B 181 0 -4.83 CISPEP 4 GLU B 182 PRO B 183 0 1.27 CRYST1 68.050 86.510 89.970 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014695 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011559 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011115 0.00000