HEADER TRANSFERASE/DNA 19-APR-96 8ICF TITLE DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE TITLE 2 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (10 MILLIMOLAR) AND TITLE 3 MGCL2 (50 MILLIMOLAR) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3'); COMPND 3 CHAIN: T; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3'); COMPND 7 CHAIN: P; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)); COMPND 11 CHAIN: A; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA-DIRECTED DNA POLYMERASE, DNA REPLICATION, DNA REPAIR, KEYWDS 2 NUCLEOTIDYLTRANSFERASE, COMPLEX (NUCLEOTIDYLTRANSFERASE-DNA, KEYWDS 3 TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.PELLETIER,M.R.SAWAYA REVDAT 5 02-AUG-23 8ICF 1 REMARK LINK REVDAT 4 24-FEB-09 8ICF 1 JRNL VERSN REVDAT 3 27-APR-04 8ICF 1 LINK REVDAT 2 01-APR-03 8ICF 1 JRNL REVDAT 1 15-NOV-96 8ICF 0 JRNL AUTH H.PELLETIER,M.R.SAWAYA JRNL TITL CHARACTERIZATION OF THE METAL ION BINDING JRNL TITL 2 HELIX-HAIRPIN-HELIX MOTIFS IN HUMAN DNA POLYMERASE BETA BY JRNL TITL 3 X-RAY STRUCTURAL ANALYSIS. JRNL REF BIOCHEMISTRY V. 35 12778 1996 JRNL REFN ISSN 0006-2960 JRNL PMID 8841120 JRNL DOI 10.1021/BI960790I REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.R.SAWAYA,T.RAWSON,S.H.WILSON,J.KRAUT,H.PELLETIER REMARK 1 TITL CRYSTAL STRUCTURES OF HUMAN DNA POLYMERASE BETA COMPLEXED REMARK 1 TITL 2 WITH NICKED AND GAPPED DNA SUBSTRATES REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 2 REMARK 1 AUTH H.PELLETIER REMARK 1 TITL THE ROLE OF THUMB MOVEMENT AND TEMPLATE BENDING IN REMARK 1 TITL 2 POLYMERASE FIDELITY REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 1 REFERENCE 3 REMARK 1 AUTH H.PELLETIER,M.R.SAWAYA,W.WOLFLE,S.H.WILSON,J.KRAUT REMARK 1 TITL CRYSTAL STRUCTURES OF HUMAN DNA POLYMERASE BETA COMPLEXED REMARK 1 TITL 2 WITH DNA; IMPLICATIONS FOR CATALYTIC MECHANISM, REMARK 1 TITL 3 PROCESSIVITY, AND FIDELITY REMARK 1 REF BIOCHEMISTRY V. 35 12742 1996 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 4 REMARK 1 AUTH H.PELLETIER,M.R.SAWAYA,W.WOLFLE,S.H.WILSON,J.KRAUT REMARK 1 TITL A STRUCTURAL BASIS FOR METAL ION MUTAGENICITY AND NUCLEOTIDE REMARK 1 TITL 2 SELECTIVITY IN HUMAN DNA POLYMERASE BETA REMARK 1 REF BIOCHEMISTRY V. 35 12762 1996 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 5 REMARK 1 AUTH H.PELLETIER REMARK 1 TITL POLYMERASE STRUCTURES AND MECHANISM REMARK 1 REF SCIENCE V. 266 2025 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 6 REMARK 1 AUTH H.PELLETIER,M.R.SAWAYA,A.KUMAR,S.H.WILSON,J.KRAUT REMARK 1 TITL STRUCTURES OF TERNARY COMPLEXES OF RAT DNA POLYMERASE BETA, REMARK 1 TITL 2 A DNA TEMPLATE- PRIMER, AND DDCTP REMARK 1 REF SCIENCE V. 264 1891 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 7 REMARK 1 AUTH M.R.SAWAYA,H.PELLETIER,A.KUMAR,S.H.WILSON,J.KRAUT REMARK 1 TITL CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA: EVIDENCE FOR A REMARK 1 TITL 2 COMMON POLYMERASE MECHANISM REMARK 1 REF SCIENCE V. 264 1930 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT 5-D REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 10998 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.1850 REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2623 REMARK 3 NUCLEIC ACID ATOMS : 289 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 135 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.017 ; 0.020 ; 3009 REMARK 3 BOND ANGLES (DEGREES) : 3.100 ; 3.000 ; 4068 REMARK 3 TORSION ANGLES (DEGREES) : 19.400; NULL ; 1800 REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : 0.015 ; 0.020 ; 73 REMARK 3 GENERAL PLANES (A) : 0.006 ; 0.020 ; 395 REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; 6.000 ; 3009 REMARK 3 NON-BONDED CONTACTS (A) : 0.023 ; 0.020 ; 195 REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : MOEWS REMARK 3 KSOL : 0.80 REMARK 3 BSOL : 563.2 REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : STANDARD TNT REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ICF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000179984. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-95 REMARK 200 TEMPERATURE (KELVIN) : 298.00 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : SDMS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SDMS REMARK 200 DATA SCALING SOFTWARE : SDMS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10998 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.14800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIFFERENCE FOURIER REMARK 200 SOFTWARE USED: TNT V. 5-D REMARK 200 STARTING MODEL: 8ICB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: THIS ENTRY DESCRIBES THE STRUCTURE REMARK 280 THAT RESULTED WHEN A COCRYSTAL OF HUMAN DNA POLYMERASE BETA REMARK 280 COMPLEXED WITH 7 BASE PAIRS OF DNA (SEE ENTRY 9ICJ AND REFERENCE REMARK 280 1) HAD BEEN SOAKED IN THE FOLLOWING SOLUTION FOR 24 HOURS: PEG REMARK 280 3350, 16% MES, 100 MILLIMOLAR, PH 6.5 NACL, 150 MILLIMOLAR DATP, REMARK 280 10 MILLIMOLAR MGCL2, 50 MILLIMOLAR SEE REFERENCE 2 FOR DETAILS REMARK 280 CONCERNING EXPERIMENTAL PROCEDURES, RESULTS, AND DISCUSSION FOR REMARK 280 THIS STRUCTURE. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 89.43750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.85650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 89.43750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.85650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, P, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 A POSSIBLE PHYSIOLOGICAL SUBSTRATE FOR POL BETA IS A DNA REMARK 400 GAP, WHERE THE LENGTH OF THE GAP CAN RANGE FROM ONE TO SIX REMARK 400 NUCLEOTIDES, AND THE DOWNSTREAM END OF THE DNA GAP IS REMARK 400 5'-PHOSPHORYLATED. IN ORDER TO CREATE VARIOUS GAPPED-DNA REMARK 400 SUBSTRATES FOR USE IN POL BETA-DNA CO-CRYSTALLIZATION REMARK 400 ATTEMPTS, THE AUTHORS HAD TO ANNEAL THREE DIFFERENT REMARK 400 OLIGONUCLEOTIDES TOGETHER PRIOR TO CRYSTALLIZATION: REMARK 400 (1) A RELATIVELY LONG (14 TO 20 MER) OLIGONUCLEOTIDE THAT REMARK 400 WAS TO SERVE AS THE TEMPLATE, (2) ONE SHORTER (5 OR 6 MER) REMARK 400 OLIGONUCLEOTIDE THAT WAS TO SERVE AS THE PRIMER, AND (3) REMARK 400 ANOTHER SHORTER (4 TO 10 MER) OLIGONUCLEOTIDE THAT WAS REMARK 400 5'-PHOSPHORYLATED AND WAS TO SERVE AS THE DOWNSTREAM REMARK 400 OLIGONUCLEOTIDE. DNA SEQUENCES CORRESPONDING TO THE REMARK 400 TEMPLATE, THE PRIMER, AND THE DOWNSTREAM OLIGONUCLEOTIDE REMARK 400 FOR THE CRYSTAL STRUCTURE PRESENTED HERE ARE: REMARK 400 5'-CATTAGAAAGGGAAGCGCCG-3' (20-MER), 5'-CGGCGC-3' (6-MER), REMARK 400 AND 5'-PO4-TCTAATG-3' (7-MER), RESPECTIVELY, WHERE "5'-PO4" REMARK 400 INDICATES THAT THE 5' TERMINUS OF THIS OLIGONUCLEOTIDE IS REMARK 400 5'-PHOSPHORYLATED. HOWEVER, AN UNEXPECTED POL BETA-DNA REMARK 400 COMPLEX RESULTED FROM THE CO-CRYSTALLIZATION ATTEMPTS SO REMARK 400 THAT WHAT WAS ORIGINALLY INTENDED TO BE THE REMARK 400 5'-PHOSPHORYLATED DOWNSTREAM OLIGONUCLEOTIDE IS BOUND REMARK 400 WHERE THE PRIMER STRAND WAS EXPECTED TO BIND (SEE REFERENCE REMARK 400 1). IN ADDITION, A MAJORITY OF THE GAPPED-DNA SUBSTRATE REMARK 400 (THAT IS, SIX BASE PAIRS OF TEMPLATE-PRIMER TETHERED TO A REMARK 400 FLEXIBLE, SINGLE-STRANDED DNA GAP) IS TOO DISORDERED TO BE REMARK 400 OBSERVABLE IN THE CRYSTAL STRUCTURE, ALTHOUGH IT IS REMARK 400 NEVERTHELESS THOUGHT TO BE PRESENT IN THE CRYSTAL LATTICE REMARK 400 (SEE REFERENCE 1). THE END RESULT IS THAT, ALTHOUGH THE REMARK 400 AFOREMENTIONED TEMPLATE IS STILL REFERRED TO AS THE REMARK 400 TEMPLATE IN THE STRUCTURES PRESENTED HERE, THE REMARK 400 AFOREMENTIONED "DOWNSTREAM OLIGONUCLEOTIDE" IS NOW CALLED REMARK 400 THE "PRIMER" -- BY ANALOGY WITH PREVIOUSLY REPORTED POL REMARK 400 BETA-DNA-DDCTP TERNARY COMPLEX STRUCTURES (SEE ENTRIES REMARK 400 2BPF AND 2BPG AND REFERENCE 8). ONLY THE DNA NUCLEOTIDES REMARK 400 THAT WERE VISIBLE IN THE STRUCTURE ARE INCLUDED IN THE REMARK 400 SEQRES SECTION BELOW. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 3 REMARK 465 ARG A 4 REMARK 465 LYS A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 GLN A 8 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DA T 8 C5' C4' O4' C3' O3' C2' C1' REMARK 470 DA T 8 N9 C8 N7 C5 C6 N6 N1 REMARK 470 DA T 8 C2 N3 C4 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 GLU A 9 REMARK 475 GLU A 247 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC T 1 O3' DC T 1 C3' 0.121 REMARK 500 DG T 6 O3' DG T 6 C3' -0.068 REMARK 500 DA T 7 O3' DA T 7 C3' -0.055 REMARK 500 DC P 2 C1' DC P 2 N1 0.113 REMARK 500 DT P 3 N1 DT P 3 C2 0.077 REMARK 500 DT P 3 C2 DT P 3 N3 -0.048 REMARK 500 DT P 3 N3 DT P 3 C4 -0.059 REMARK 500 DT P 3 C4 DT P 3 C5 0.056 REMARK 500 DA P 5 O3' DA P 5 C3' -0.051 REMARK 500 DG P 7 C5' DG P 7 C4' 0.048 REMARK 500 GLU A 26 CD GLU A 26 OE1 0.077 REMARK 500 GLU A 86 CD GLU A 86 OE1 0.074 REMARK 500 GLU A 117 CD GLU A 117 OE2 0.069 REMARK 500 GLU A 147 CD GLU A 147 OE2 0.069 REMARK 500 GLU A 153 CD GLU A 153 OE2 0.078 REMARK 500 GLU A 172 CD GLU A 172 OE2 0.077 REMARK 500 GLU A 203 CD GLU A 203 OE1 0.074 REMARK 500 GLU A 232 CD GLU A 232 OE2 0.071 REMARK 500 GLU A 249 CD GLU A 249 OE2 0.077 REMARK 500 GLU A 295 CD GLU A 295 OE2 0.075 REMARK 500 GLU A 309 CD GLU A 309 OE2 0.066 REMARK 500 GLU A 329 CD GLU A 329 OE2 0.071 REMARK 500 GLU A 335 CD GLU A 335 OE2 0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC T 1 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 DC T 1 C3' - O3' - P ANGL. DEV. = 11.2 DEGREES REMARK 500 DA T 2 O5' - C5' - C4' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT T 3 C6 - N1 - C1' ANGL. DEV. = -11.1 DEGREES REMARK 500 DT T 3 C2 - N1 - C1' ANGL. DEV. = 11.5 DEGREES REMARK 500 DT T 4 C1' - O4' - C4' ANGL. DEV. = -8.6 DEGREES REMARK 500 DT T 4 N1 - C1' - C2' ANGL. DEV. = 8.7 DEGREES REMARK 500 DT T 4 O4' - C1' - N1 ANGL. DEV. = 5.6 DEGREES REMARK 500 DT T 4 C6 - N1 - C1' ANGL. DEV. = -37.2 DEGREES REMARK 500 DT T 4 C2 - N1 - C1' ANGL. DEV. = 35.5 DEGREES REMARK 500 DA T 5 N1 - C6 - N6 ANGL. DEV. = 4.4 DEGREES REMARK 500 DA T 5 C8 - N9 - C1' ANGL. DEV. = 17.9 DEGREES REMARK 500 DA T 5 C4 - N9 - C1' ANGL. DEV. = -18.4 DEGREES REMARK 500 DG T 6 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DG T 6 C8 - N9 - C1' ANGL. DEV. = 14.6 DEGREES REMARK 500 DG T 6 C4 - N9 - C1' ANGL. DEV. = -14.8 DEGREES REMARK 500 DA T 7 O4' - C1' - N9 ANGL. DEV. = 4.6 DEGREES REMARK 500 DA T 7 C8 - N9 - C1' ANGL. DEV. = 14.2 DEGREES REMARK 500 DA T 7 C4 - N9 - C1' ANGL. DEV. = -16.2 DEGREES REMARK 500 DT P 1 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 DT P 1 C6 - N1 - C1' ANGL. DEV. = -37.0 DEGREES REMARK 500 DT P 1 C2 - N1 - C1' ANGL. DEV. = 35.9 DEGREES REMARK 500 DC P 2 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DC P 2 C6 - N1 - C2 ANGL. DEV. = -2.6 DEGREES REMARK 500 DC P 2 N3 - C2 - O2 ANGL. DEV. = -4.4 DEGREES REMARK 500 DC P 2 C6 - N1 - C1' ANGL. DEV. = -17.1 DEGREES REMARK 500 DC P 2 C2 - N1 - C1' ANGL. DEV. = 19.8 DEGREES REMARK 500 DC P 2 C3' - O3' - P ANGL. DEV. = 7.7 DEGREES REMARK 500 DT P 3 O4' - C1' - N1 ANGL. DEV. = 9.3 DEGREES REMARK 500 DT P 3 C5 - C6 - N1 ANGL. DEV. = -3.6 DEGREES REMARK 500 DT P 3 N1 - C2 - O2 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT P 3 N3 - C2 - O2 ANGL. DEV. = -7.6 DEGREES REMARK 500 DT P 3 N3 - C4 - O4 ANGL. DEV. = -5.9 DEGREES REMARK 500 DT P 3 C5 - C4 - O4 ANGL. DEV. = 4.9 DEGREES REMARK 500 DT P 3 C6 - N1 - C1' ANGL. DEV. = -32.2 DEGREES REMARK 500 DT P 3 C2 - N1 - C1' ANGL. DEV. = 32.6 DEGREES REMARK 500 DT P 3 C3' - O3' - P ANGL. DEV. = 15.1 DEGREES REMARK 500 DA P 5 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT P 6 C6 - N1 - C1' ANGL. DEV. = -21.8 DEGREES REMARK 500 DT P 6 C2 - N1 - C1' ANGL. DEV. = 22.2 DEGREES REMARK 500 DG P 7 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DG P 7 C8 - N9 - C1' ANGL. DEV. = 16.8 DEGREES REMARK 500 DG P 7 C4 - N9 - C1' ANGL. DEV. = -15.3 DEGREES REMARK 500 ASN A 12 N - CA - CB ANGL. DEV. = 10.9 DEGREES REMARK 500 ASP A 17 CB - CG - OD1 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP A 17 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASN A 28 CA - CB - CG ANGL. DEV. = -16.7 DEGREES REMARK 500 TYR A 36 CA - CB - CG ANGL. DEV. = -12.3 DEGREES REMARK 500 PRO A 50 C - N - CA ANGL. DEV. = 14.4 DEGREES REMARK 500 PRO A 50 C - N - CD ANGL. DEV. = -20.7 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 80 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 10 -20.19 -172.96 REMARK 500 ASN A 28 -71.78 -71.09 REMARK 500 GLN A 31 75.45 -118.23 REMARK 500 TYR A 49 118.01 -37.41 REMARK 500 PRO A 50 17.63 -65.03 REMARK 500 GLN A 90 -72.35 -74.49 REMARK 500 ASP A 91 114.39 -26.91 REMARK 500 ASP A 116 -3.60 -58.26 REMARK 500 HIS A 134 -40.73 -26.17 REMARK 500 ARG A 183 28.85 -77.70 REMARK 500 ALA A 185 139.01 -12.34 REMARK 500 SER A 199 8.35 -52.70 REMARK 500 SER A 202 -40.73 -18.82 REMARK 500 GLU A 203 -67.31 -104.07 REMARK 500 SER A 204 81.14 -31.56 REMARK 500 THR A 205 77.98 -35.86 REMARK 500 LYS A 206 179.40 49.79 REMARK 500 GLN A 207 88.12 176.38 REMARK 500 THR A 233 -27.36 -151.02 REMARK 500 LYS A 244 -137.30 -39.80 REMARK 500 ASP A 246 141.16 17.02 REMARK 500 GLU A 247 -19.18 142.93 REMARK 500 LYS A 262 -19.11 -41.72 REMARK 500 TYR A 265 -76.10 -43.64 REMARK 500 SER A 275 -178.43 -68.84 REMARK 500 LYS A 289 29.51 -61.91 REMARK 500 GLU A 295 -36.15 -25.06 REMARK 500 ALA A 307 144.11 162.12 REMARK 500 GLU A 309 76.37 79.60 REMARK 500 PRO A 310 94.27 -45.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 DTP A 338 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 341 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT P 6 OP1 REMARK 620 2 THR A 101 O 151.3 REMARK 620 3 VAL A 103 O 87.6 112.0 REMARK 620 4 ILE A 106 O 67.7 91.5 87.9 REMARK 620 5 HOH A 601 O 106.3 80.3 124.4 147.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 341 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 342 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 338 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7ICE RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF CACL2 REMARK 900 RELATED ID: 7ICF RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) REMARK 900 (FOUR-DAY SOAK) REMARK 900 RELATED ID: 7ICG RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF CDCL2 REMARK 900 RELATED ID: 7ICH RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF COCL2 REMARK 900 RELATED ID: 7ICI RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (0.1 MILLIMOLAR) REMARK 900 RELATED ID: 7ICJ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CUCL2 (0.1 MILLIMOLAR) REMARK 900 RELATED ID: 7ICK RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF MGCL2 REMARK 900 RELATED ID: 7ICL RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) REMARK 900 RELATED ID: 7ICM RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (1.0 MILLIMOLAR) REMARK 900 RELATED ID: 7ICN RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF NICL2 REMARK 900 RELATED ID: 7ICO RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ZNCL2 REMARK 900 RELATED ID: 7ICP RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF ZNCL2 (0.01 MILLIMOLAR) REMARK 900 RELATED ID: 7ICQ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ZNCL2 REMARK 900 RELATED ID: 7ICR RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ZNCL2 REMARK 900 RELATED ID: 7ICS RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ZNCL2 REMARK 900 RELATED ID: 7ICT RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ZNCL2 AND MGCL2 REMARK 900 RELATED ID: 7ICU RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CDCL2 (0.1 MILLIMOLAR) REMARK 900 RELATED ID: 7ICV RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (0.1 MILLIMOLAR) AND REMARK 900 IN THE ABSENCE OF NACL REMARK 900 RELATED ID: 8ICA RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 CACL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICB RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF ARTIFICIAL MOTHER LIQUOR REMARK 900 RELATED ID: 8ICC RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA (NO 5'-PHOSPHATE) REMARK 900 RELATED ID: 8ICE RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 CDCL2 (1 MILLIMOLAR) REMARK 900 RELATED ID: 8ICG RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 MGCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICH RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND REMARK 900 MGCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICI RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND REMARK 900 MGCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICJ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'- REMARK 900 TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MGCL2 REMARK 900 RELATED ID: 8ICK RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MGCL2 REMARK 900 (5 MILLIMOLAR), AND MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICL RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 NICL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICM RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR), MNCL2 REMARK 900 (5 MILLIMOLAR), AND AMMONIUM SULFATE (75 MILLIMOLAR) REMARK 900 RELATED ID: 8ICN RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF ATP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICO RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF AZT-TP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICP RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICQ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (0.1 MILLIMOLAR) REMARK 900 AND MNCL2 (0.5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICR RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICS RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICT RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICU RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DDATP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICV RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICW RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICX RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 8ICY RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + THYMIDINE-5'- REMARK 900 TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DTTP AND MNCL2 REMARK 900 RELATED ID: 8ICZ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF OF DATP (1 MILLIMOLAR), REMARK 900 MNCL2 (5 MILLIMOLAR), AND LITHIUM SULFATE (75 MILLIMOLAR) REMARK 900 RELATED ID: 9ICA RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5' REMARK 900 -O-(1-THIOTRIPHOSPHATE), SOAKED IN THE PRESENCE OF DATP(ALPHA)S AND REMARK 900 MNCL2 REMARK 900 RELATED ID: 9ICB RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5' REMARK 900 -TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND COCL2 REMARK 900 RELATED ID: 9ICC RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5' REMARK 900 -TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND CRCL3 REMARK 900 RELATED ID: 9ICE RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 CUCL2 (0.1 MILLIMOLAR) REMARK 900 RELATED ID: 9ICF RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5' REMARK 900 -TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 REMARK 900 RELATED ID: 9ICG RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DCTP (1 MILLIMOLAR) AND REMARK 900 ZNCL2 (1 MILLIMOLAR) REMARK 900 RELATED ID: 9ICH RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DGTP (1 MILLIMOLAR) AND REMARK 900 ZNCL2 (1 MILLIMOLAR) REMARK 900 RELATED ID: 9ICI RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND REMARK 900 ZNCL2 (1 MILLIMOLAR) REMARK 900 RELATED ID: 9ICJ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA REMARK 900 RELATED ID: 9ICK RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF ARTIFICIAL MOTHER LIQUOR REMARK 900 RELATED ID: 9ICL RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF PYROPHOSPHATE AND MNCL2 REMARK 900 RELATED ID: 9ICM RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DOUBLE STRANDED DNA (NO 5'-PHOSPHATE) REMARK 900 RELATED ID: 9ICN RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'- REMARK 900 DIDEOXYCYTIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP REMARK 900 AND MGCL2 REMARK 900 RELATED ID: 9ICO RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF DTTP AND MGCL2 REMARK 900 RELATED ID: 9ICP RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF PYROPHOSPHATE (1 MILLIMOLAR) REMARK 900 AND MGCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 9ICQ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 9ICR RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYCYTIDINE-5'- REMARK 900 TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DCTP AND MNCL2 REMARK 900 RELATED ID: 9ICS RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2',3'- REMARK 900 DIDEOXYCYTIDINE-5'-TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DDCTP REMARK 900 AND MNCL2 REMARK 900 RELATED ID: 9ICT RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYGUANOSINE-5' REMARK 900 -TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DGTP AND MNCL2 REMARK 900 RELATED ID: 9ICU RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DTTP (1 MILLIMOLAR) AND REMARK 900 MNCL2 (5 MILLIMOLAR) REMARK 900 RELATED ID: 9ICV RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX + 2'-DEOXYADENOSINE-5' REMARK 900 -TRIPHOSPHATE, SOAKED IN THE PRESENCE OF DATP AND ZNCL2 REMARK 900 RELATED ID: 9ICW RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA; NATIVE STRUCTURE REMARK 900 RELATED ID: 9ICX RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SIX BASE REMARK 900 PAIRS OF DNA (NON GAPPED DNA ONLY) REMARK 900 RELATED ID: 9ICY RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE PAIRS REMARK 900 OF DNA (NON GAPPED DNA ONLY) REMARK 900 RELATED ID: 1ZQA RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) AT PH REMARK 900 7.5 REMARK 900 RELATED ID: 1ZQB RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (150 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQC RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQD RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (150 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQE RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CRCL3 (SATURATED SOLUTION) REMARK 900 RELATED ID: 1ZQF RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CSCL (150 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQG RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL REMARK 900 MOTHER LIQUOR AT PH 6.5 REMARK 900 RELATED ID: 1ZQH RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF A SODIUM-FREE ARTIFICIAL REMARK 900 MOTHER LIQUOR AT PH 7.5 REMARK 900 RELATED ID: 1ZQI RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (150 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQJ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND REMARK 900 MGCL2 (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQK RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND REMARK 900 MGCL2 (75 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQL RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND REMARK 900 MGCL2 (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQM RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQN RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF BACL2 (15 MILLIMOLAR) AND REMARK 900 NACL (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQO RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF CACL2 (15 MILLIMOLAR) AND REMARK 900 NACL (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQP RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF KCL (75 MILLIMOLAR) AND REMARK 900 NACL (75 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQQ RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF MNCL2 (15 MILLIMOLAR) AND REMARK 900 NACL (15 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQR RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (E.C.2.7.7.7)/DNA COMPLEX, SOAKED IN THE REMARK 900 PRESENCE OF NICL2 REMARK 900 RELATED ID: 1ZQS RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF TLCL (0.5 MILLIMOLAR) REMARK 900 RELATED ID: 1ZQT RELATED DB: PDB REMARK 900 DNA POLYMERASE BETA (POL B) (E.C.2.7.7.7) COMPLEXED WITH SEVEN BASE REMARK 900 PAIRS OF DNA; SOAKED IN THE PRESENCE OF DATP (0.01 MILLIMOLAR) AND REMARK 900 ZNCL2 (0.02 MILLIMOLAR) DBREF 8ICF A 2 335 UNP P06746 DPOB_HUMAN 1 334 DBREF 8ICF T 1 8 PDB 8ICF 8ICF 1 8 DBREF 8ICF P 1 7 PDB 8ICF 8ICF 1 7 SEQRES 1 T 8 DC DA DT DT DA DG DA DA SEQRES 1 P 7 DT DC DT DA DA DT DG SEQRES 1 A 335 MET SER LYS ARG LYS ALA PRO GLN GLU THR LEU ASN GLY SEQRES 2 A 335 GLY ILE THR ASP MET LEU THR GLU LEU ALA ASN PHE GLU SEQRES 3 A 335 LYS ASN VAL SER GLN ALA ILE HIS LYS TYR ASN ALA TYR SEQRES 4 A 335 ARG LYS ALA ALA SER VAL ILE ALA LYS TYR PRO HIS LYS SEQRES 5 A 335 ILE LYS SER GLY ALA GLU ALA LYS LYS LEU PRO GLY VAL SEQRES 6 A 335 GLY THR LYS ILE ALA GLU LYS ILE ASP GLU PHE LEU ALA SEQRES 7 A 335 THR GLY LYS LEU ARG LYS LEU GLU LYS ILE ARG GLN ASP SEQRES 8 A 335 ASP THR SER SER SER ILE ASN PHE LEU THR ARG VAL SER SEQRES 9 A 335 GLY ILE GLY PRO SER ALA ALA ARG LYS PHE VAL ASP GLU SEQRES 10 A 335 GLY ILE LYS THR LEU GLU ASP LEU ARG LYS ASN GLU ASP SEQRES 11 A 335 LYS LEU ASN HIS HIS GLN ARG ILE GLY LEU LYS TYR PHE SEQRES 12 A 335 GLY ASP PHE GLU LYS ARG ILE PRO ARG GLU GLU MET LEU SEQRES 13 A 335 GLN MET GLN ASP ILE VAL LEU ASN GLU VAL LYS LYS VAL SEQRES 14 A 335 ASP SER GLU TYR ILE ALA THR VAL CYS GLY SER PHE ARG SEQRES 15 A 335 ARG GLY ALA GLU SER SER GLY ASP MET ASP VAL LEU LEU SEQRES 16 A 335 THR HIS PRO SER PHE THR SER GLU SER THR LYS GLN PRO SEQRES 17 A 335 LYS LEU LEU HIS GLN VAL VAL GLU GLN LEU GLN LYS VAL SEQRES 18 A 335 HIS PHE ILE THR ASP THR LEU SER LYS GLY GLU THR LYS SEQRES 19 A 335 PHE MET GLY VAL CYS GLN LEU PRO SER LYS ASN ASP GLU SEQRES 20 A 335 LYS GLU TYR PRO HIS ARG ARG ILE ASP ILE ARG LEU ILE SEQRES 21 A 335 PRO LYS ASP GLN TYR TYR CYS GLY VAL LEU TYR PHE THR SEQRES 22 A 335 GLY SER ASP ILE PHE ASN LYS ASN MET ARG ALA HIS ALA SEQRES 23 A 335 LEU GLU LYS GLY PHE THR ILE ASN GLU TYR THR ILE ARG SEQRES 24 A 335 PRO LEU GLY VAL THR GLY VAL ALA GLY GLU PRO LEU PRO SEQRES 25 A 335 VAL ASP SER GLU LYS ASP ILE PHE ASP TYR ILE GLN TRP SEQRES 26 A 335 LYS TYR ARG GLU PRO LYS ASP ARG SER GLU HET NA A 341 1 HET NA A 342 1 HET DTP A 338 13 HETNAM NA SODIUM ION HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE FORMUL 4 NA 2(NA 1+) FORMUL 6 DTP C10 H16 N5 O12 P3 FORMUL 7 HOH *135(H2 O) HELIX 1 A GLY A 13 ASN A 28 1 16 HELIX 2 B ILE A 33 LYS A 48 1 16 HELIX 3 C SER A 55 LYS A 61 1 7 HELIX 4 D THR A 67 THR A 79 1 13 HELIX 5 E ARG A 83 GLN A 90 1 8 HELIX 6 F ASP A 92 ARG A 102 1 11 HELIX 7 G PRO A 108 GLY A 118 1 11 HELIX 8 H LEU A 122 LYS A 131 1 10 HELIX 9 I HIS A 134 GLU A 147 1 14 HELIX 10 J ARG A 152 VAL A 169 1 18 HELIX 11 K GLY A 179 GLY A 184 1 6 HELIX 12 L PRO A 208 LYS A 220 5 13 HELIX 13 M LYS A 262 THR A 273 5 12 HELIX 14 N ASP A 276 GLU A 288 1 13 HELIX 15 O GLU A 316 ILE A 323 1 8 HELIX 16 P PRO A 330 ASP A 332 5 3 SHEET 1 A 5 ILE A 174 CYS A 178 0 SHEET 2 A 5 MET A 191 THR A 196 -1 N THR A 196 O ILE A 174 SHEET 3 A 5 ARG A 253 ARG A 258 1 N ASP A 256 O MET A 191 SHEET 4 A 5 LYS A 234 CYS A 239 -1 N CYS A 239 O ARG A 253 SHEET 5 A 5 ILE A 224 THR A 227 -1 N ASP A 226 O VAL A 238 SHEET 1 B 2 PHE A 291 ASN A 294 0 SHEET 2 B 2 THR A 297 PRO A 300 -1 N ARG A 299 O THR A 292 LINK OP1 DT P 6 NA NA A 341 1555 1555 2.46 LINK O LEU A 62 NA NA A 342 1555 1555 2.45 LINK O THR A 101 NA NA A 341 1555 1555 2.26 LINK O VAL A 103 NA NA A 341 1555 1555 2.28 LINK O ILE A 106 NA NA A 341 1555 1555 2.34 LINK NA NA A 341 O HOH A 601 1555 1555 2.37 CISPEP 1 GLY A 274 SER A 275 0 -0.54 SITE 1 AC1 5 THR A 101 VAL A 103 ILE A 106 HOH A 601 SITE 2 AC1 5 DT P 6 SITE 1 AC2 2 LYS A 60 LEU A 62 SITE 1 AC3 6 SER A 180 ARG A 183 SER A 188 GLY A 189 SITE 2 AC3 6 ASP A 190 HOH A 631 CRYST1 178.875 57.713 48.385 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005590 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017327 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020668 0.00000 TER 146 DA T 8 TER 291 DG P 7 TER 2915 GLU A 335 HETATM 2916 NA NA A 341 60.385 30.221 59.136 1.00 17.40 NA HETATM 2917 NA NA A 342 47.306 62.689 50.952 1.00 52.50 NA HETATM 2918 PG DTP A 338 73.907 35.450 52.821 0.50 62.27 P HETATM 2919 O1G DTP A 338 74.306 35.474 51.394 0.50 59.35 O HETATM 2920 O2G DTP A 338 74.844 34.817 53.776 0.50 64.65 O HETATM 2921 O3G DTP A 338 72.420 34.875 52.968 0.50 60.09 O HETATM 2922 PB DTP A 338 73.982 38.263 52.454 0.50 70.17 P HETATM 2923 O1B DTP A 338 74.585 39.284 53.342 0.50 68.48 O HETATM 2924 O2B DTP A 338 74.701 37.840 51.221 0.50 68.18 O HETATM 2925 O3B DTP A 338 73.678 36.977 53.280 0.50 64.79 O HETATM 2926 PA DTP A 338 71.541 38.148 50.850 0.50 83.03 P HETATM 2927 O1A DTP A 338 71.908 36.746 50.539 0.50 81.97 O HETATM 2928 O2A DTP A 338 70.101 38.459 51.115 0.50 85.28 O HETATM 2929 O3A DTP A 338 72.459 38.662 52.049 0.50 76.61 O HETATM 2930 O5' DTP A 338 72.085 39.079 49.675 0.50 84.80 O HETATM 2931 O HOH T 517 58.507 14.764 51.545 1.00 56.40 O HETATM 2932 O HOH T 525 52.849 27.736 41.791 1.00 51.26 O HETATM 2933 O HOH T 526 53.959 30.919 42.603 1.00 40.04 O HETATM 2934 O HOH T 537 61.703 25.897 35.705 1.00 52.38 O HETATM 2935 O HOH T 545 61.049 15.928 42.417 1.00 57.15 O HETATM 2936 O HOH T 546 62.333 16.008 46.729 1.00 75.26 O HETATM 2937 O HOH T 547 54.869 15.829 54.728 1.00 51.87 O HETATM 2938 O HOH T 564 55.221 21.907 50.978 1.00 25.40 O HETATM 2939 O HOH T 585 65.027 30.606 39.089 1.00 76.87 O HETATM 2940 O HOH T 596 59.472 19.340 52.653 1.00 67.31 O HETATM 2941 O HOH T 634 45.031 20.443 49.475 1.00 84.30 O HETATM 2942 O HOH T 651 48.863 21.191 51.007 1.00 75.78 O HETATM 2943 O HOH T 652 52.348 19.183 44.040 1.00 59.44 O HETATM 2944 O HOH T 654 62.844 37.854 43.361 1.00 53.50 O HETATM 2945 O HOH P 510 53.980 32.167 53.718 1.00 19.61 O HETATM 2946 O HOH P 511 50.699 25.012 51.271 1.00 86.05 O HETATM 2947 O HOH P 534 66.317 32.506 55.554 1.00 61.05 O HETATM 2948 O HOH P 566 64.027 34.202 55.216 1.00 52.29 O HETATM 2949 O HOH P 567 60.775 32.996 54.730 1.00 47.91 O HETATM 2950 O HOH P 568 51.804 24.956 56.355 1.00 66.01 O HETATM 2951 O HOH P 569 46.703 27.321 52.876 1.00 59.92 O HETATM 2952 O HOH P 570 47.354 30.989 43.600 1.00 49.18 O HETATM 2953 O HOH P 571 49.643 22.917 38.120 1.00 79.75 O HETATM 2954 O HOH P 594 60.497 26.049 48.224 1.00 77.53 O HETATM 2955 O HOH P 595 54.883 24.936 52.143 1.00 44.07 O HETATM 2956 O HOH P 599 48.781 28.574 40.762 1.00 80.30 O HETATM 2957 O HOH P 613 46.313 33.567 52.741 1.00 43.82 O HETATM 2958 O HOH P 615 42.549 31.376 48.454 1.00 72.95 O HETATM 2959 O HOH P 635 44.420 23.880 47.173 1.00 85.48 O HETATM 2960 O HOH P 648 57.084 32.459 54.418 1.00 37.80 O HETATM 2961 O HOH P 653 66.080 35.298 43.423 1.00 65.49 O HETATM 2962 O HOH P 655 65.001 35.967 46.478 1.00 44.93 O HETATM 2963 O HOH A 501 84.721 39.577 28.243 1.00 62.31 O HETATM 2964 O HOH A 502 76.933 32.465 50.480 1.00 8.80 O HETATM 2965 O HOH A 503 74.477 28.589 60.181 1.00 35.22 O HETATM 2966 O HOH A 505 66.178 30.966 60.569 1.00 22.82 O HETATM 2967 O HOH A 506 53.608 48.678 48.871 1.00 34.43 O HETATM 2968 O HOH A 507 87.634 39.598 52.468 1.00 25.01 O HETATM 2969 O HOH A 508 74.771 35.541 32.071 1.00 53.88 O HETATM 2970 O HOH A 509 66.425 12.413 52.776 1.00 59.61 O HETATM 2971 O HOH A 512 57.488 21.254 52.296 1.00 27.52 O HETATM 2972 O HOH A 513 60.914 22.019 51.069 1.00 27.59 O HETATM 2973 O HOH A 514 66.236 28.353 61.734 1.00 46.07 O HETATM 2974 O HOH A 515 60.587 13.157 58.152 1.00 44.78 O HETATM 2975 O HOH A 516 63.333 12.387 57.494 1.00 74.44 O HETATM 2976 O HOH A 518 74.704 15.208 61.375 1.00 97.59 O HETATM 2977 O HOH A 519 69.856 12.990 52.520 1.00 68.97 O HETATM 2978 O HOH A 520 78.118 14.787 58.733 1.00 77.59 O HETATM 2979 O HOH A 521 80.635 25.557 59.177 1.00 16.30 O HETATM 2980 O HOH A 522 77.525 35.376 50.991 1.00 52.96 O HETATM 2981 O HOH A 523 72.397 32.158 59.741 1.00 49.42 O HETATM 2982 O HOH A 524 41.671 49.935 64.200 1.00 72.53 O HETATM 2983 O HOH A 527 60.109 23.638 48.006 1.00 22.81 O HETATM 2984 O HOH A 528 72.163 42.537 51.922 1.00 50.93 O HETATM 2985 O HOH A 529 74.553 42.279 54.477 1.00 75.62 O HETATM 2986 O HOH A 530 81.424 36.053 54.110 1.00 34.85 O HETATM 2987 O HOH A 531 74.068 34.381 25.601 1.00 54.99 O HETATM 2988 O HOH A 533 72.998 28.456 57.913 1.00 34.30 O HETATM 2989 O HOH A 535 63.877 29.955 42.604 1.00 27.60 O HETATM 2990 O HOH A 536 73.339 36.036 29.493 1.00 24.62 O HETATM 2991 O HOH A 538 67.090 26.487 38.943 1.00 32.41 O HETATM 2992 O HOH A 539 56.747 24.101 54.583 1.00 41.75 O HETATM 2993 O HOH A 541 70.462 12.120 41.049 1.00 26.42 O HETATM 2994 O HOH A 542 73.590 12.661 53.385 1.00 63.01 O HETATM 2995 O HOH A 543 71.030 13.535 59.029 1.00 43.26 O HETATM 2996 O HOH A 544 66.822 13.620 55.631 1.00 77.03 O HETATM 2997 O HOH A 550 78.142 15.533 33.178 1.00 56.86 O HETATM 2998 O HOH A 551 82.364 16.872 29.315 1.00 53.19 O HETATM 2999 O HOH A 552 86.952 15.589 35.241 1.00 36.98 O HETATM 3000 O HOH A 553 60.865 60.724 62.472 1.00 38.11 O HETATM 3001 O HOH A 555 72.945 45.445 37.105 1.00 42.68 O HETATM 3002 O HOH A 556 47.999 49.720 49.305 1.00 54.47 O HETATM 3003 O HOH A 557 72.363 42.521 37.353 1.00 32.70 O HETATM 3004 O HOH A 558 44.898 36.349 62.362 1.00 87.02 O HETATM 3005 O HOH A 560 44.495 44.360 63.097 1.00 62.80 O HETATM 3006 O HOH A 561 44.699 41.226 64.426 1.00 53.30 O HETATM 3007 O HOH A 562 55.811 44.912 67.587 1.00 47.08 O HETATM 3008 O HOH A 563 57.920 38.001 69.922 1.00 50.24 O HETATM 3009 O HOH A 565 59.195 26.320 52.436 1.00 35.90 O HETATM 3010 O HOH A 575 65.818 29.326 57.695 1.00 36.92 O HETATM 3011 O HOH A 576 83.771 33.413 42.834 1.00 63.50 O HETATM 3012 O HOH A 577 79.308 22.963 58.501 1.00 16.04 O HETATM 3013 O HOH A 578 71.971 38.829 27.941 1.00 27.19 O HETATM 3014 O HOH A 579 69.371 33.855 26.226 1.00 22.15 O HETATM 3015 O HOH A 580 65.694 43.292 31.341 1.00 67.59 O HETATM 3016 O HOH A 581 65.565 45.340 33.580 1.00 80.97 O HETATM 3017 O HOH A 582 62.856 43.902 32.851 1.00 70.51 O HETATM 3018 O HOH A 583 79.136 53.315 32.029 1.00 37.03 O HETATM 3019 O HOH A 584 77.413 42.237 41.122 1.00 31.34 O HETATM 3020 O HOH A 589 87.343 19.004 57.916 1.00 74.40 O HETATM 3021 O HOH A 590 69.384 23.167 66.501 1.00 56.42 O HETATM 3022 O HOH A 591 75.678 20.300 64.975 1.00 19.60 O HETATM 3023 O HOH A 592 71.285 39.578 36.309 1.00 41.40 O HETATM 3024 O HOH A 593 68.207 42.222 30.627 1.00 41.69 O HETATM 3025 O HOH A 597 51.781 19.417 58.545 1.00 46.07 O HETATM 3026 O HOH A 600 64.042 26.578 61.806 1.00 59.42 O HETATM 3027 O HOH A 601 62.191 31.754 59.013 1.00 68.08 O HETATM 3028 O HOH A 602 78.054 34.272 64.870 1.00 89.73 O HETATM 3029 O HOH A 603 45.720 56.160 72.580 1.00 30.45 O HETATM 3030 O HOH A 604 50.497 22.336 72.285 1.00 49.64 O HETATM 3031 O HOH A 606 62.649 59.731 64.868 1.00 56.16 O HETATM 3032 O HOH A 607 60.877 53.789 50.867 1.00 69.18 O HETATM 3033 O HOH A 608 57.293 50.241 49.458 1.00 61.89 O HETATM 3034 O HOH A 610 60.732 41.683 22.401 1.00 91.17 O HETATM 3035 O HOH A 611 64.967 37.810 29.921 1.00 48.13 O HETATM 3036 O HOH A 612 49.970 33.190 54.443 1.00 61.09 O HETATM 3037 O HOH A 614 46.713 28.100 55.035 1.00 85.84 O HETATM 3038 O HOH A 616 43.069 40.068 53.138 1.00 55.39 O HETATM 3039 O HOH A 617 62.691 26.684 44.705 1.00 30.16 O HETATM 3040 O HOH A 618 84.192 30.544 42.238 1.00 60.19 O HETATM 3041 O HOH A 620 77.037 29.114 62.578 1.00 48.28 O HETATM 3042 O HOH A 621 72.639 19.470 66.214 1.00 63.97 O HETATM 3043 O HOH A 622 63.538 17.079 63.649 1.00 66.40 O HETATM 3044 O HOH A 623 61.604 25.718 73.708 1.00 87.86 O HETATM 3045 O HOH A 624 65.482 23.193 28.695 1.00 40.52 O HETATM 3046 O HOH A 625 71.188 20.279 30.365 1.00 56.17 O HETATM 3047 O HOH A 626 71.550 35.882 25.633 1.00 64.36 O HETATM 3048 O HOH A 627 82.929 38.656 24.885 1.00 99.86 O HETATM 3049 O HOH A 628 63.861 35.856 23.724 1.00 46.14 O HETATM 3050 O HOH A 629 69.566 33.382 35.954 1.00 95.24 O HETATM 3051 O HOH A 631 74.412 39.336 48.985 1.00 71.75 O HETATM 3052 O HOH A 636 81.266 14.559 61.371 1.00 86.07 O HETATM 3053 O HOH A 637 80.679 14.037 67.067 1.00 59.94 O HETATM 3054 O HOH A 638 47.704 37.204 76.674 1.00 45.00 O HETATM 3055 O HOH A 639 56.298 40.169 69.963 1.00 62.24 O HETATM 3056 O HOH A 640 60.758 36.655 67.217 1.00 66.98 O HETATM 3057 O HOH A 641 43.576 38.697 60.362 1.00 70.50 O HETATM 3058 O HOH A 642 60.120 62.870 62.809 1.00 45.11 O HETATM 3059 O HOH A 643 57.893 14.405 69.389 1.00 58.37 O HETATM 3060 O HOH A 644 74.703 11.016 36.637 1.00 70.62 O HETATM 3061 O HOH A 645 55.402 46.587 75.459 1.00 46.95 O HETATM 3062 O HOH A 646 39.976 44.758 73.930 1.00 74.50 O HETATM 3063 O HOH A 647 50.014 36.184 77.233 1.00 56.91 O HETATM 3064 O HOH A 649 47.176 54.023 69.221 1.00 46.70 O HETATM 3065 O HOH A 650 57.280 48.672 22.668 1.00 30.74 O CONECT 250 2916 CONECT 706 2917 CONECT 1010 2916 CONECT 1028 2916 CONECT 1045 2916 CONECT 2916 250 1010 1028 1045 CONECT 2916 3027 CONECT 2917 706 CONECT 2918 2919 2920 2921 2925 CONECT 2919 2918 CONECT 2920 2918 CONECT 2921 2918 CONECT 2922 2923 2924 2925 2929 CONECT 2923 2922 CONECT 2924 2922 CONECT 2925 2918 2922 CONECT 2926 2927 2928 2929 2930 CONECT 2927 2926 CONECT 2928 2926 CONECT 2929 2922 2926 CONECT 2930 2926 CONECT 3027 2916 MASTER 789 0 3 16 7 0 5 6 3062 3 22 28 END