HEADER LYASE 11-FEB-23 8ID1 TITLE CRYSTAL STRUCTURE OF N-METHYL-CIS-4-HYDROXY-L-PROLINE DEHYDRATASE IN TITLE 2 INTESTINIBACTER BARTLETTII COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMATE C-ACETYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THE PROTEIN WAS FROM INTESTINIBACTER BARTLETTII COMPND 6 (GENBANK ASSESS NUMBER: MCB5397844.1) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INTESTINIBACTER BARTLETTII; SOURCE 3 ORGANISM_TAXID: 261299; SOURCE 4 GENE: C7955_105265; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCYL RADICAL ENZYMES, DEHYDRATASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR L.JIANG,Y.ZHANG REVDAT 1 27-MAR-24 8ID1 0 JRNL AUTH L.JIANG,Y.ZHANG JRNL TITL CRYSTAL STRUCTURE OF CIS-N-METHYLHYDROXY-L-PROLINE JRNL TITL 2 DEHYDRATASE IN INTESTINIBACTER BARTLETTII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 18056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.309 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1795 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.5000 - 7.3164 0.99 1444 158 0.1757 0.2669 REMARK 3 2 7.3164 - 5.8100 1.00 1366 153 0.2211 0.3182 REMARK 3 3 5.8100 - 5.0763 0.98 1315 148 0.2033 0.2580 REMARK 3 4 5.0763 - 4.6125 0.97 1290 144 0.1828 0.3111 REMARK 3 5 4.6125 - 4.2821 0.94 1260 136 0.1836 0.2994 REMARK 3 6 4.2821 - 4.0298 0.93 1227 133 0.1895 0.2856 REMARK 3 7 4.0298 - 3.8280 0.93 1222 135 0.2087 0.2999 REMARK 3 8 3.8280 - 3.6614 0.91 1195 134 0.2134 0.3358 REMARK 3 9 3.6614 - 3.5205 0.92 1219 130 0.2561 0.3205 REMARK 3 10 3.5205 - 3.3991 0.92 1196 134 0.2682 0.3726 REMARK 3 11 3.3991 - 3.2928 0.90 1162 134 0.2869 0.4229 REMARK 3 12 3.2928 - 3.1987 0.91 1190 127 0.2956 0.4063 REMARK 3 13 3.1987 - 3.1150 0.90 1175 129 0.3162 0.4061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6306 REMARK 3 ANGLE : 1.361 8511 REMARK 3 CHIRALITY : 0.065 931 REMARK 3 PLANARITY : 0.008 1102 REMARK 3 DIHEDRAL : 4.914 3812 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ID1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 16-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1300035401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19290 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.110 REMARK 200 RESOLUTION RANGE LOW (A) : 82.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 16.30 REMARK 200 R MERGE (I) : 0.23700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.11 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 16.10 REMARK 200 R MERGE FOR SHELL (I) : 1.50800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CHLORIDE, 0.1 M BIS-TRIS, REMARK 280 PH 6.5, 1.5 M AMMONIUM SULFATE, 50 MM CIS-N-METHYLHYDROXY-L- REMARK 280 PROLINE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 71.37350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 71.37350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.51600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 71.37350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 71.37350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.51600 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 71.37350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 71.37350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.51600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 71.37350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.37350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.51600 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LYS A 3 REMARK 465 LYS A 4 REMARK 465 GLN A 5 REMARK 465 TYR A 6 REMARK 465 ALA A 787 REMARK 465 HIS A 788 REMARK 465 ALA A 789 REMARK 465 ASN A 790 REMARK 465 ALA A 791 REMARK 465 CYS A 792 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 303 CG1 CG2 CD1 REMARK 470 GLU A 519 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 158 O03 6IW A 801 1.57 REMARK 500 C CYS A 522 CD PRO A 523 1.73 REMARK 500 NH2 ARG A 158 O02 6IW A 801 1.87 REMARK 500 NH2 ARG A 158 C10 6IW A 801 2.08 REMARK 500 O GLY A 517 CG2 ILE A 521 2.09 REMARK 500 O GLY A 403 NH1 ARG A 763 2.10 REMARK 500 OG SER A 449 OD1 ASP A 553 2.15 REMARK 500 OD1 ASP A 670 OG SER A 673 2.19 REMARK 500 N ASN A 382 OD1 ASN A 386 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 446 CB CYS A 446 SG -0.104 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 15 N - CA - C ANGL. DEV. = -21.9 DEGREES REMARK 500 ASP A 65 N - CA - C ANGL. DEV. = 17.1 DEGREES REMARK 500 ARG A 158 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLN A 374 C - N - CA ANGL. DEV. = -18.2 DEGREES REMARK 500 PRO A 523 C - N - CA ANGL. DEV. = 23.1 DEGREES REMARK 500 PRO A 523 C - N - CD ANGL. DEV. = -51.5 DEGREES REMARK 500 PRO A 523 N - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 LEU A 748 CA - CB - CG ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 9 87.41 -52.79 REMARK 500 ARG A 12 12.89 -55.20 REMARK 500 LEU A 13 15.21 -67.79 REMARK 500 LYS A 14 55.97 -106.00 REMARK 500 ASN A 19 39.25 -97.21 REMARK 500 GLU A 27 -72.13 -68.40 REMARK 500 GLU A 58 50.25 -116.27 REMARK 500 ASP A 65 -21.22 -25.82 REMARK 500 ASN A 72 129.13 177.84 REMARK 500 SER A 73 -6.79 -59.18 REMARK 500 SER A 75 -25.81 -151.50 REMARK 500 ARG A 78 55.53 36.64 REMARK 500 THR A 86 -60.47 -95.72 REMARK 500 THR A 97 -50.91 -133.06 REMARK 500 ILE A 98 -37.86 -28.36 REMARK 500 ASP A 110 -39.78 -23.39 REMARK 500 ASN A 117 35.40 -95.42 REMARK 500 THR A 129 -75.21 -32.35 REMARK 500 ILE A 137 129.78 -39.59 REMARK 500 LYS A 139 -70.58 -36.25 REMARK 500 TRP A 160 -75.30 -71.75 REMARK 500 SER A 194 -69.95 -18.84 REMARK 500 GLN A 229 24.61 -64.31 REMARK 500 LEU A 230 13.43 -142.50 REMARK 500 LYS A 235 -71.00 -53.23 REMARK 500 THR A 246 -72.26 -74.19 REMARK 500 CYS A 247 -9.64 -44.41 REMARK 500 ARG A 249 -80.53 -96.39 REMARK 500 VAL A 250 -116.34 25.44 REMARK 500 ALA A 255 152.07 -47.06 REMARK 500 LEU A 265 -75.42 -43.83 REMARK 500 SER A 280 52.38 77.66 REMARK 500 ARG A 285 63.84 -61.74 REMARK 500 SER A 334 55.43 -178.21 REMARK 500 SER A 376 84.49 -56.79 REMARK 500 ARG A 380 79.99 -115.51 REMARK 500 ARG A 385 -41.33 -161.43 REMARK 500 LYS A 399 34.71 -81.50 REMARK 500 ASN A 419 -5.64 -57.85 REMARK 500 TRP A 430 145.52 -34.22 REMARK 500 VAL A 436 6.55 -150.72 REMARK 500 LYS A 443 15.70 -140.88 REMARK 500 CYS A 446 110.76 157.59 REMARK 500 THR A 448 -4.13 -57.81 REMARK 500 SER A 449 69.65 -163.30 REMARK 500 ALA A 475 -72.56 -70.54 REMARK 500 PHE A 491 -71.27 -72.16 REMARK 500 PHE A 518 -92.41 -46.09 REMARK 500 ILE A 521 60.31 -115.27 REMARK 500 PRO A 523 -158.60 -127.97 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 8ID1 A 1 792 PDB 8ID1 8ID1 1 792 SEQRES 1 A 792 MET GLU LYS LYS GLN TYR LEU ASP ARG ILE LYS ARG LEU SEQRES 2 A 792 LYS GLU ARG VAL LEU ASN THR ARG PRO GLU MET ASP LEU SEQRES 3 A 792 GLU ASN ALA VAL LEU LEU THR ARG GLY PHE LYS GLU SER SEQRES 4 A 792 GLU GLY GLN PRO LEU ALA ILE GLN LYS ALA TYR SER PHE SEQRES 5 A 792 ARG LYS GLN CYS THR GLU LYS THR VAL LYS ILE TRP ASP SEQRES 6 A 792 ASP GLU LEU ILE VAL GLY ASN SER GLY SER LYS GLN ARG SEQRES 7 A 792 GLY GLY LEU LEU ASN PRO ASP THR CYS TRP SER VAL LEU SEQRES 8 A 792 GLU ASP GLU ILE ASP THR ILE SER GLU ARG LYS TYR ASP SEQRES 9 A 792 PRO PHE TYR LEU THR ASP ILE ASP ARG LYS ARG PHE ASN SEQRES 10 A 792 GLU GLU ILE LYS PRO TYR TRP LYS GLY ARG SER THR PHE SEQRES 11 A 792 GLU LYS TRP LEU VAL GLN ILE PRO LYS GLU THR LYS ILE SEQRES 12 A 792 LEU ARG ASP CYS GLY VAL LEU TYR ILE ASN ARG LYS ALA SEQRES 13 A 792 VAL ARG GLY TRP GLY GLU THR THR ALA GLY TYR GLU MET SEQRES 14 A 792 VAL ILE ASN GLU GLY ILE GLU GLY ILE LYS ARG ARG ILE SEQRES 15 A 792 GLU GLU THR LYS ASN ASN LEU ASP ILE THR LYS SER GLY SEQRES 16 A 792 HIS TYR GLU LYS LEU ALA TYR LEU LYS ALA LEU SER LEU SEQRES 17 A 792 VAL ALA GLU GLY ILE ILE ILE LEU SER LYS ARG TYR ALA SEQRES 18 A 792 LYS GLU ALA LYS ARG LEU ALA GLN LEU GLU THR ASP SER SEQRES 19 A 792 LYS ARG LYS LYS GLU LEU GLU ILE ILE ALA LYS THR CYS SEQRES 20 A 792 ASP ARG VAL PRO GLU LYS PRO ALA ARG THR PHE ARG GLU SEQRES 21 A 792 ALA LEU GLN SER LEU TYR PHE TYR GLN ILE CYS ILE PHE SEQRES 22 A 792 MET GLU GLN ASN ALA ALA SER TYR ASN PRO GLY ARG MET SEQRES 23 A 792 ASP GLN TYR LEU TYR PRO TYR TYR LYS SER ASP ILE GLU SEQRES 24 A 792 SER GLY ARG ILE THR LYS ASP GLU ALA GLN GLU LEU LEU SEQRES 25 A 792 ASP CYS LEU TRP VAL LYS PHE SER GLU PRO CYS LEU PHE SEQRES 26 A 792 GLN ASP GLU VAL THR ALA GLN PHE SER ALA GLY TYR PRO SEQRES 27 A 792 MET PHE GLN ASN VAL CYS VAL GLY GLY ILE ASP GLU ARG SEQRES 28 A 792 GLY MET ASP ALA VAL ASN ASP LEU SER PHE MET ILE LEU SEQRES 29 A 792 GLN ALA THR MET ASP VAL GLN LEU TYR GLN PRO SER LEU SEQRES 30 A 792 SER VAL ARG TYR ASN MET SER ARG ASN SER ASN ALA PHE SEQRES 31 A 792 LEU LYS LYS VAL ALA GLU VAL MET LYS LEU GLY THR GLY SEQRES 32 A 792 PHE PRO ALA PHE HIS SER ASP GLU VAL GLY ILE GLN MET SEQRES 33 A 792 MET LEU ASN LYS GLY ILE PRO MET ARG GLU ALA TYR ASN SEQRES 34 A 792 TRP ASN PRO CYS GLY CYS VAL GLU THR ASN LEU ALA GLY SEQRES 35 A 792 LYS GLN ARG CYS TYR THR SER TYR ALA ASP TYR ASN LEU SEQRES 36 A 792 GLY ALA ILE VAL GLU PHE VAL MET ASN ASN GLY LYS SER SEQRES 37 A 792 ARG LYS TYR ASN THR GLN ALA SER ILE ALA THR GLY ASP SEQRES 38 A 792 PRO CYS THR PHE GLU THR TYR ASN GLU PHE LEU GLY ALA SEQRES 39 A 792 VAL LYS ASN GLN ILE ARG TYR VAL ILE ARG ALA MET VAL SEQRES 40 A 792 ALA GLY SER HIS VAL ASN ASP ASP ILE GLY PHE GLU ARG SEQRES 41 A 792 ILE CYS PRO ALA LEU SER LEU SER PHE LYS GLU CYS ILE SEQRES 42 A 792 SER SER ALA LYS ASP TYR ALA TRP GLY GLY ALA LYS TYR SEQRES 43 A 792 ASN ILE GLY ASN GLY LEU ASP ALA ILE GLY VAL ALA ASP SEQRES 44 A 792 LEU VAL ASN SER VAL TYR ALA VAL LYS TYR LEU VAL TYR SEQRES 45 A 792 ASP LYS LYS LEU ILE SER MET GLU LYS LEU VAL LYS ALA SEQRES 46 A 792 ILE SER ASN ASP PHE GLU GLY TYR GLU GLU ILE GLN LYS SEQRES 47 A 792 MET CYS LEU ASP VAL PRO LYS TYR GLY ASN ASP ASP GLU SEQRES 48 A 792 GLU VAL ASN GLU LEU THR ALA ASP LEU PHE THR PHE ILE SEQRES 49 A 792 ALA ASP LEU ILE GLU SER PHE SER GLY LYS PHE GLY HIS SEQRES 50 A 792 MET THR ALA GLY ILE LEU PRO VAL SER GLY ASN THR PRO SEQRES 51 A 792 PHE GLY LEU GLU VAL GLY ALA LEU PRO SER GLY ARG ASN SEQRES 52 A 792 ALA PHE VAL PRO LEU ALA ASP GLY VAL SER PRO THR ALA SEQRES 53 A 792 GLY THR ASP ILE GLU GLY MET GLY ALA ILE ILE LYS SER SEQRES 54 A 792 VAL SER HIS ILE PRO HIS ILE ARG PHE ASN GLN GLY THR SEQRES 55 A 792 LEU LEU ASN LEU LYS LEU ASP PRO VAL PHE ASN GLN ASN SEQRES 56 A 792 ALA ASN SER THR GLU SER LEU MET ALA PHE LEU LYS SER SEQRES 57 A 792 MET CYS SER LEU GLY VAL PHE HIS VAL GLN PHE ASN VAL SEQRES 58 A 792 ILE ASP LYS GLU VAL LEU LEU ASP ALA GLN LYS HIS PRO SEQRES 59 A 792 GLU ASN TYR LYS GLY LEU LEU ILE ARG VAL ALA GLY TYR SEQRES 60 A 792 THR ALA TYR PHE VAL GLU LEU GLY LYS GLU VAL GLN ASP SEQRES 61 A 792 ASP ILE ILE ALA ARG THR ALA HIS ALA ASN ALA CYS HET 6IW A 801 20 HETNAM 6IW (2S,4S)-1-METHYL-4-OXIDANYL-PYRROLIDINE-2-CARBOXYLIC HETNAM 2 6IW ACID FORMUL 2 6IW C6 H11 N O3 HELIX 1 AA1 LEU A 26 SER A 39 1 14 HELIX 2 AA2 PRO A 43 GLU A 58 1 16 HELIX 3 AA3 ASN A 83 TRP A 88 1 6 HELIX 4 AA4 TRP A 88 GLU A 94 1 7 HELIX 5 AA5 ILE A 111 ASN A 117 1 7 HELIX 6 AA6 ILE A 120 LYS A 125 1 6 HELIX 7 AA7 SER A 128 ILE A 137 1 10 HELIX 8 AA8 PRO A 138 CYS A 147 1 10 HELIX 9 AA9 ASN A 153 ARG A 158 1 6 HELIX 10 AB1 GLY A 166 GLU A 173 1 8 HELIX 11 AB2 GLU A 173 ASN A 188 1 16 HELIX 12 AB3 GLY A 195 GLN A 229 1 35 HELIX 13 AB4 ASP A 233 ASP A 248 1 16 HELIX 14 AB5 THR A 257 GLN A 276 1 20 HELIX 15 AB6 ARG A 285 LEU A 290 1 6 HELIX 16 AB7 LEU A 290 GLU A 299 1 10 HELIX 17 AB8 THR A 304 SER A 320 1 17 HELIX 18 AB9 ASP A 327 PHE A 333 1 7 HELIX 19 AC1 ASN A 357 GLN A 371 1 15 HELIX 20 AC2 SER A 387 LYS A 399 1 13 HELIX 21 AC3 ASP A 410 ASN A 419 1 10 HELIX 22 AC4 PRO A 423 TYR A 428 1 6 HELIX 23 AC5 LEU A 455 MET A 463 1 9 HELIX 24 AC6 ASP A 481 PHE A 485 5 5 HELIX 25 AC7 TYR A 488 ILE A 521 1 34 HELIX 26 AC8 LEU A 525 SER A 528 5 4 HELIX 27 AC9 PHE A 529 ALA A 536 1 8 HELIX 28 AD1 GLY A 556 ASP A 573 1 18 HELIX 29 AD2 SER A 578 ASN A 588 1 11 HELIX 30 AD3 GLU A 595 LEU A 601 1 7 HELIX 31 AD4 ASP A 610 GLU A 629 1 20 HELIX 32 AD5 GLY A 647 LEU A 653 1 7 HELIX 33 AD6 MET A 683 HIS A 692 1 10 HELIX 34 AD7 PRO A 694 PHE A 698 5 5 HELIX 35 AD8 ASP A 709 ASN A 713 5 5 HELIX 36 AD9 ASN A 717 GLY A 733 1 17 HELIX 37 AE1 ASP A 743 HIS A 753 1 11 HELIX 38 AE2 PRO A 754 LYS A 758 5 5 HELIX 39 AE3 VAL A 772 LEU A 774 5 3 HELIX 40 AE4 GLY A 775 ARG A 785 1 11 SHEET 1 AA1 2 GLU A 23 ASP A 25 0 SHEET 2 AA1 2 GLY A 79 LEU A 81 1 O GLY A 80 N ASP A 25 SHEET 1 AA2 4 LEU A 150 TYR A 151 0 SHEET 2 AA2 4 ALA A 451 ASN A 454 -1 O ASP A 452 N TYR A 151 SHEET 3 AA2 4 GLY A 551 ILE A 555 1 O ILE A 555 N TYR A 453 SHEET 4 AA2 4 THR A 639 GLY A 641 1 O GLY A 641 N ALA A 554 SHEET 1 AA3 5 ASN A 342 VAL A 345 0 SHEET 2 AA3 5 SER A 376 TYR A 381 1 O SER A 376 N VAL A 343 SHEET 3 AA3 5 ALA A 406 SER A 409 1 O HIS A 408 N TYR A 381 SHEET 4 AA3 5 HIS A 736 VAL A 741 -1 O VAL A 737 N PHE A 407 SHEET 5 AA3 5 ASN A 705 LEU A 708 1 N LEU A 708 O ASN A 740 SHEET 1 AA4 2 ASN A 431 CYS A 433 0 SHEET 2 AA4 2 GLU A 437 ASN A 439 -1 O GLU A 437 N CYS A 433 SHEET 1 AA5 2 GLN A 444 ARG A 445 0 SHEET 2 AA5 2 TYR A 546 ASN A 547 1 O TYR A 546 N ARG A 445 SHEET 1 AA6 2 SER A 632 GLY A 633 0 SHEET 2 AA6 2 GLY A 636 HIS A 637 -1 O GLY A 636 N GLY A 633 SHEET 1 AA7 2 LEU A 761 ARG A 763 0 SHEET 2 AA7 2 THR A 768 TYR A 770 -1 O ALA A 769 N ILE A 762 CISPEP 1 PHE A 404 PRO A 405 0 -1.13 CRYST1 142.747 142.747 101.032 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007005 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007005 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009898 0.00000