HEADER ANTIMICROBIAL PROTEIN 28-FEB-23 8IKQ TITLE NMR STRUCTURE OF THANATIN IM14 IN LPS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ILE-ILE-TYR-CYS-ASN-ARG-ARG-THR-GLY-LYS-CYS-GLN-ARG-MET; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: PODISUS MACULIVENTRIS; SOURCE 4 ORGANISM_TAXID: 29025 KEYWDS STRUCTURE FROM CYANA 2.1, PEPTIDE BINDING PROTEIN, ANTIMICROBIAL KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.SWALEEHA,S.BHATTACHARYYA REVDAT 3 09-OCT-24 8IKQ 1 REMARK REVDAT 2 15-MAY-24 8IKQ 1 REMARK REVDAT 1 06-MAR-24 8IKQ 0 JRNL AUTH J.SWALEEHA,S.BHATTACHARRYA JRNL TITL NMR STRUCTURE OF THANATIN IM14 IN LPS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, SPARKY REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), GODDARD REMARK 3 (SPARKY) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IKQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1300033848. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 300 UM IM14 WITH LPS, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D TOCSY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CYANA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 2 -71.58 -113.72 REMARK 500 2 ILE A 2 -73.84 -113.78 REMARK 500 2 LYS A 10 -169.07 -110.02 REMARK 500 6 ILE A 2 -74.15 -113.82 REMARK 500 6 LYS A 10 -169.17 -119.32 REMARK 500 6 GLN A 12 -73.75 -87.31 REMARK 500 7 ILE A 2 -73.62 -113.70 REMARK 500 7 ARG A 13 -64.94 -107.44 REMARK 500 8 ILE A 2 -73.19 -113.84 REMARK 500 9 ILE A 2 -73.91 -113.80 REMARK 500 10 ILE A 2 -73.71 -113.77 REMARK 500 10 LYS A 10 -167.65 -109.98 REMARK 500 10 ARG A 13 -76.42 -123.65 REMARK 500 11 ILE A 2 -73.97 -113.84 REMARK 500 11 ARG A 7 -77.47 -79.94 REMARK 500 12 ILE A 2 -74.05 -113.79 REMARK 500 12 ARG A 7 -77.42 -79.99 REMARK 500 13 TYR A 3 147.63 -171.44 REMARK 500 13 GLN A 12 157.96 -44.66 REMARK 500 14 LYS A 10 -169.47 -77.25 REMARK 500 14 CYS A 11 -169.07 -128.79 REMARK 500 14 GLN A 12 166.39 -48.42 REMARK 500 15 ILE A 2 -73.14 -113.79 REMARK 500 15 ARG A 7 -79.90 -80.46 REMARK 500 16 ILE A 2 -73.85 -113.74 REMARK 500 16 ARG A 7 -80.04 -80.60 REMARK 500 17 ILE A 2 -73.58 -113.79 REMARK 500 17 ARG A 7 -78.79 -80.67 REMARK 500 17 LYS A 10 -167.73 -109.84 REMARK 500 17 GLN A 12 -72.75 -109.78 REMARK 500 18 ILE A 2 -74.34 -113.70 REMARK 500 18 ARG A 7 -81.11 -80.82 REMARK 500 19 ILE A 2 -72.01 -113.80 REMARK 500 19 ARG A 7 -77.54 -80.21 REMARK 500 19 GLN A 12 50.11 -142.88 REMARK 500 20 ILE A 2 -74.79 -113.90 REMARK 500 20 ARG A 7 -77.16 -80.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36551 RELATED DB: BMRB REMARK 900 NMR STRUCTURE OF THANATIN IM14 IN LPS DBREF 8IKQ A 1 14 PDB 8IKQ 8IKQ 1 14 SEQRES 1 A 14 ILE ILE TYR CYS ASN ARG ARG THR GLY LYS CYS GLN ARG SEQRES 2 A 14 MET SSBOND 1 CYS A 4 CYS A 11 1555 1555 1.99 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL MODEL 11 ENDMDL MODEL 12 ENDMDL MODEL 13 ENDMDL MODEL 14 ENDMDL MODEL 15 ENDMDL MODEL 16 ENDMDL MODEL 17 ENDMDL MODEL 18 ENDMDL MODEL 19 ENDMDL MODEL 20 ENDMDL CONECT 65 180 CONECT 180 65 MASTER 124 0 0 0 0 0 0 6 118 1 2 2 END