HEADER HYDROLASE 01-MAR-23 8IKX TITLE AN ARABIDOPSIS POLYGALACTURONASE PGLR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PECTIN LYASE-LIKE SUPERFAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYGALACTURONASE-LIKE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT5G14650, AT5G14650, T15N1.140, T15N1_140; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS POLYGALACTURONASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.XIAO,J.CHAI REVDAT 2 28-FEB-24 8IKX 1 JRNL REVDAT 1 07-FEB-24 8IKX 0 JRNL AUTH Y.XIAO,G.SUN,Q.YU,T.GAO,Q.ZHU,R.WANG,S.HUANG,Z.HAN, JRNL AUTH 2 F.CERVONE,H.YIN,T.QI,Y.WANG,J.CHAI JRNL TITL A PLANT MECHANISM OF HIJACKING PATHOGEN VIRULENCE FACTORS TO JRNL TITL 2 TRIGGER INNATE IMMUNITY. JRNL REF SCIENCE V. 383 732 2024 JRNL REFN ESSN 1095-9203 JRNL PMID 38359129 JRNL DOI 10.1126/SCIENCE.ADJ9529 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX V1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 58577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6100 - 4.1300 0.99 2727 165 0.1609 0.1492 REMARK 3 2 4.1300 - 3.2800 0.99 2713 175 0.1370 0.1636 REMARK 3 3 3.2800 - 2.8700 0.99 2743 138 0.1535 0.1674 REMARK 3 4 2.8700 - 2.6100 0.98 2724 130 0.1527 0.1782 REMARK 3 5 2.6100 - 2.4200 0.98 2720 141 0.1584 0.1901 REMARK 3 6 2.4200 - 2.2800 0.98 2704 142 0.1514 0.2050 REMARK 3 7 2.2800 - 2.1600 0.97 2722 125 0.1495 0.1497 REMARK 3 8 2.1600 - 2.0700 0.97 2671 153 0.1563 0.1599 REMARK 3 9 2.0700 - 1.9900 0.97 2721 141 0.1528 0.1836 REMARK 3 10 1.9900 - 1.9200 0.97 2690 144 0.1492 0.1802 REMARK 3 11 1.9200 - 1.8600 0.96 2650 136 0.1582 0.1787 REMARK 3 12 1.8600 - 1.8100 0.96 2652 142 0.1705 0.2205 REMARK 3 13 1.8100 - 1.7600 0.96 2666 129 0.1815 0.2208 REMARK 3 14 1.7600 - 1.7200 0.95 2627 157 0.1749 0.2081 REMARK 3 15 1.7200 - 1.6800 0.95 2629 147 0.1810 0.2182 REMARK 3 16 1.6800 - 1.6400 0.94 2617 125 0.1785 0.2111 REMARK 3 17 1.6400 - 1.6100 0.94 2647 127 0.1823 0.2106 REMARK 3 18 1.6100 - 1.5800 0.93 2580 132 0.1786 0.2318 REMARK 3 19 1.5800 - 1.5500 0.92 2544 136 0.1822 0.2362 REMARK 3 20 1.5500 - 1.5200 0.91 2525 141 0.1868 0.2043 REMARK 3 21 1.5200 - 1.5000 0.85 2340 139 0.2039 0.2388 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.134 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.059 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3060 REMARK 3 ANGLE : 1.052 4153 REMARK 3 CHIRALITY : 0.102 500 REMARK 3 PLANARITY : 0.008 523 REMARK 3 DIHEDRAL : 6.683 471 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IKX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1300033966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL18U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58730 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.9 REMARK 200 DATA REDUNDANCY IN SHELL : 1.40 REMARK 200 R MERGE FOR SHELL (I) : 0.23300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M TRIMETHYLAMINE N-OXIDE DIHYDRATE, REMARK 280 0.1M TRIS PH 8.5, 20% W/V PEG MME 2000, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 938 O HOH A 1016 1.78 REMARK 500 O HOH A 804 O HOH A 1016 1.82 REMARK 500 O HOH A 831 O HOH A 894 1.83 REMARK 500 O HOH A 927 O HOH A 1051 1.84 REMARK 500 O HOH A 951 O HOH A 982 1.88 REMARK 500 NZ LYS A 422 O HOH A 601 1.89 REMARK 500 OD1 ASN A 351 O HOH A 602 1.92 REMARK 500 O HOH A 737 O HOH A 897 1.93 REMARK 500 O HOH A 636 O HOH A 969 1.95 REMARK 500 O HOH A 1021 O HOH A 1066 1.97 REMARK 500 OD2 ASP A 259 O HOH A 603 1.98 REMARK 500 O HOH A 933 O HOH A 1066 2.00 REMARK 500 O HOH A 730 O HOH A 1041 2.00 REMARK 500 O HOH A 1000 O HOH A 1035 2.04 REMARK 500 O HOH A 722 O HOH A 813 2.06 REMARK 500 OE1 GLU A 135 O HOH A 604 2.08 REMARK 500 O HOH A 901 O HOH A 1059 2.11 REMARK 500 O HOH A 663 O HOH A 693 2.12 REMARK 500 O HOH A 948 O HOH A 1060 2.12 REMARK 500 O HOH A 980 O HOH A 1022 2.15 REMARK 500 OG SER A 247 O HOH A 605 2.16 REMARK 500 OE2 GLU A 135 O HOH A 606 2.17 REMARK 500 O PRO A 171 O HOH A 607 2.17 REMARK 500 O HOH A 996 O HOH A 1055 2.17 REMARK 500 OE1 GLN A 75 O HOH A 608 2.18 REMARK 500 O HOH A 730 O HOH A 854 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 953 O HOH A 1028 1545 1.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 133 -99.23 -110.36 REMARK 500 GLN A 194 -105.41 -144.66 REMARK 500 SER A 204 74.90 70.43 REMARK 500 ASP A 231 68.77 62.33 REMARK 500 ASP A 243 -155.89 -148.83 REMARK 500 ASP A 289 60.26 63.40 REMARK 500 GLN A 313 71.76 61.89 REMARK 500 CYS A 335 26.37 -157.65 REMARK 500 CYS A 340 55.04 -117.07 REMARK 500 ASN A 356 64.03 62.27 REMARK 500 LYS A 363 -149.13 -118.24 REMARK 500 LEU A 374 82.48 -158.22 REMARK 500 ASP A 433 -78.78 -77.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1094 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A1098 DISTANCE = 6.87 ANGSTROMS DBREF 8IKX A 49 435 UNP Q9LYJ5 Q9LYJ5_ARATH 49 435 SEQADV 8IKX HIS A 436 UNP Q9LYJ5 EXPRESSION TAG SEQADV 8IKX HIS A 437 UNP Q9LYJ5 EXPRESSION TAG SEQADV 8IKX HIS A 438 UNP Q9LYJ5 EXPRESSION TAG SEQRES 1 A 390 GLY THR ILE ASN VAL LEU ASP HIS GLY ALA LYS GLY ASP SEQRES 2 A 390 GLY THR SER ASP ASP THR LYS ALA PHE GLU ASP ALA TRP SEQRES 3 A 390 GLN VAL ALA CYS LYS VAL ALA ALA SER THR LEU LEU VAL SEQRES 4 A 390 PRO SER GLY SER THR PHE LEU VAL GLY PRO VAL SER PHE SEQRES 5 A 390 LEU GLY LYS GLU CYS LYS GLU LYS ILE VAL PHE GLN LEU SEQRES 6 A 390 GLU GLY LYS ILE ILE ALA PRO THR SER ALA SER ALA TRP SEQRES 7 A 390 GLY SER GLY LEU LEU GLN TRP ILE GLU PHE LYS ALA LEU SEQRES 8 A 390 GLN GLY ILE THR ILE LYS GLY LYS GLY ILE ILE ASP GLY SEQRES 9 A 390 ARG GLY SER VAL TRP TRP ASN ASP MET MET GLY THR LYS SEQRES 10 A 390 MET PRO ARG THR LYS PRO THR ALA LEU ARG PHE TYR GLY SEQRES 11 A 390 SER ASN GLY VAL THR VAL SER GLY ILE THR ILE GLN ASN SEQRES 12 A 390 SER PRO GLN THR HIS LEU LYS PHE ASP ASN CYS ILE SER SEQRES 13 A 390 ILE GLN VAL SER ASP PHE THR THR SER SER PRO GLY ASP SEQRES 14 A 390 SER PRO ASN THR ASP GLY ILE HIS LEU GLN ASN SER GLN SEQRES 15 A 390 ASP ALA VAL ILE TYR ARG SER THR LEU ALA CYS GLY ASP SEQRES 16 A 390 ASP CYS ILE SER ILE GLN THR GLY CYS SER ASN ILE ASN SEQRES 17 A 390 ILE HIS ASP VAL ASP CYS GLY PRO GLY HIS GLY ILE SER SEQRES 18 A 390 ILE GLY GLY LEU GLY LYS ASP ASN THR LYS ALA CYS VAL SEQRES 19 A 390 SER ASN ILE THR VAL ARG ASP VAL THR MET HIS GLU THR SEQRES 20 A 390 THR ASN GLY VAL ARG ILE LYS SER TRP GLN GLY GLY SER SEQRES 21 A 390 GLY SER VAL LYS GLN VAL MET PHE SER ASN ILE GLN VAL SEQRES 22 A 390 SER ASN VAL ALA ASN PRO ILE ILE ILE ASP GLN TYR TYR SEQRES 23 A 390 CYS ASP GLY GLY GLY CYS HIS ASN GLU THR SER ALA VAL SEQRES 24 A 390 ALA VAL SER ASN ILE ASN TYR ILE ASN ILE LYS GLY THR SEQRES 25 A 390 TYR THR LYS GLU PRO VAL ARG PHE ALA CYS SER ASP SER SEQRES 26 A 390 LEU PRO CYS THR GLY ILE SER LEU SER THR ILE GLU LEU SEQRES 27 A 390 LYS PRO ALA THR GLY LYS ALA SER SER LEU ASP PRO PHE SEQRES 28 A 390 CYS TRP LYS ALA HIS GLY GLU LEU LYS THR LYS THR LEU SEQRES 29 A 390 PRO PRO ILE GLN CYS LEU LYS THR GLU LYS SER PRO GLU SEQRES 30 A 390 ALA ALA SER ARG SER ASN ASN ASP ALA CYS HIS HIS HIS HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET MAN B 5 11 HET MAN B 6 11 HET MAN B 7 11 HET NAG A 501 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN 4(C6 H12 O6) FORMUL 4 HOH *499(H2 O) HELIX 1 AA1 LEU A 54 GLY A 57 5 4 HELIX 2 AA2 ASP A 66 LYS A 79 1 14 HELIX 3 AA3 SER A 122 GLY A 127 1 6 HELIX 4 AA4 GLY A 154 ASN A 159 1 6 HELIX 5 AA5 LYS A 392 LEU A 396 5 5 HELIX 6 AA6 SER A 423 ARG A 429 1 7 HELIX 7 AA7 SER A 430 ASP A 433 5 4 SHEET 1 AA113 ILE A 51 ASN A 52 0 SHEET 2 AA113 THR A 84 VAL A 87 1 O THR A 84 N ILE A 51 SHEET 3 AA113 VAL A 110 LEU A 113 1 O GLN A 112 N LEU A 85 SHEET 4 AA113 GLN A 140 LYS A 145 1 O THR A 143 N PHE A 111 SHEET 5 AA113 ASN A 180 SER A 185 1 O THR A 183 N ILE A 144 SHEET 6 AA113 ILE A 203 SER A 208 1 O ILE A 203 N GLY A 181 SHEET 7 AA113 GLN A 230 ALA A 240 1 O TYR A 235 N VAL A 207 SHEET 8 AA113 THR A 211 SER A 213 1 N THR A 212 O THR A 238 SHEET 9 AA113 THR A 188 GLN A 190 1 N ILE A 189 O THR A 211 SHEET 10 AA113 ILE A 149 ASP A 151 1 N ILE A 150 O GLN A 190 SHEET 11 AA113 LYS A 116 ILE A 118 1 N ILE A 117 O ASP A 151 SHEET 12 AA113 THR A 92 LEU A 94 1 N PHE A 93 O LYS A 116 SHEET 13 AA113 ASP A 61 ASP A 65 1 N GLY A 62 O THR A 92 SHEET 1 AA213 ILE A 51 ASN A 52 0 SHEET 2 AA213 THR A 84 VAL A 87 1 O THR A 84 N ILE A 51 SHEET 3 AA213 VAL A 110 LEU A 113 1 O GLN A 112 N LEU A 85 SHEET 4 AA213 GLN A 140 LYS A 145 1 O THR A 143 N PHE A 111 SHEET 5 AA213 ASN A 180 SER A 185 1 O THR A 183 N ILE A 144 SHEET 6 AA213 ILE A 203 SER A 208 1 O ILE A 203 N GLY A 181 SHEET 7 AA213 GLN A 230 ALA A 240 1 O TYR A 235 N VAL A 207 SHEET 8 AA213 CYS A 252 CYS A 262 1 O ASP A 261 N LEU A 239 SHEET 9 AA213 LYS A 279 HIS A 293 1 O THR A 286 N ILE A 255 SHEET 10 AA213 SER A 308 VAL A 324 1 O SER A 317 N VAL A 287 SHEET 11 AA213 ALA A 348 TYR A 361 1 O ASN A 353 N PHE A 316 SHEET 12 AA213 CYS A 376 PRO A 388 1 O LYS A 387 N GLY A 359 SHEET 13 AA213 ALA A 403 LEU A 407 1 O GLU A 406 N ILE A 379 SHEET 1 AA311 VAL A 98 LEU A 101 0 SHEET 2 AA311 ILE A 134 LYS A 137 1 O GLU A 135 N PHE A 100 SHEET 3 AA311 LEU A 174 TYR A 177 1 O TYR A 177 N PHE A 136 SHEET 4 AA311 LEU A 197 ASP A 200 1 O LYS A 198 N PHE A 176 SHEET 5 AA311 ILE A 224 GLN A 227 1 O HIS A 225 N LEU A 197 SHEET 6 AA311 ILE A 246 ILE A 248 1 O SER A 247 N ILE A 224 SHEET 7 AA311 ILE A 268 LEU A 273 1 O SER A 269 N ILE A 246 SHEET 8 AA311 ASN A 297 SER A 303 1 O LYS A 302 N ILE A 270 SHEET 9 AA311 ASN A 326 ASP A 331 1 O ASP A 331 N ILE A 301 SHEET 10 AA311 VAL A 366 ALA A 369 1 O ALA A 369 N ILE A 330 SHEET 11 AA311 PHE A 399 TRP A 401 1 O TRP A 401 N PHE A 368 SSBOND 1 CYS A 78 CYS A 105 1555 1555 2.04 SSBOND 2 CYS A 245 CYS A 262 1555 1555 2.08 SSBOND 3 CYS A 281 CYS A 435 1555 1555 2.04 SSBOND 4 CYS A 335 CYS A 340 1555 1555 2.05 SSBOND 5 CYS A 370 CYS A 376 1555 1555 2.03 SSBOND 6 CYS A 400 CYS A 417 1555 1555 2.06 LINK ND2 ASN A 284 C1 NAG A 501 1555 1555 1.43 LINK ND2 ASN A 342 C1 NAG B 1 1555 1555 1.43 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.43 LINK O3 BMA B 3 C1 MAN B 7 1555 1555 1.44 LINK O3 MAN B 4 C1 MAN B 5 1555 1555 1.44 LINK O6 MAN B 4 C1 MAN B 6 1555 1555 1.44 CISPEP 1 GLY A 263 PRO A 264 0 -4.22 CISPEP 2 GLY A 271 GLY A 272 0 6.66 CISPEP 3 LEU A 412 PRO A 413 0 -6.48 CRYST1 39.212 43.540 63.478 94.59 99.99 110.55 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025502 0.009560 0.006024 0.00000 SCALE2 0.000000 0.024528 0.003793 0.00000 SCALE3 0.000000 0.000000 0.016186 0.00000