HEADER PROTEIN BINDING 15-MAR-23 8IPW TITLE THE STURECTURE OF LEGIONELLA EFFECTOR PROTEIN MAVL WITH ADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAVL; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 GENE: C3927_12725; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MAVL, ADPR, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR S.OUYANG,G.HONGXIN REVDAT 1 20-MAR-24 8IPW 0 JRNL AUTH S.OUYANG,G.HONGXIN JRNL TITL THE STURECTURE OF LEGIONELLA EFFECTOR PROTEIN MAVL WITH ADPR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (24-FEB-2021) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 30117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.630 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.37 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.01 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 603 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3162 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 563 REMARK 3 BIN R VALUE (WORKING SET) : 0.3172 REMARK 3 BIN FREE R VALUE : 0.3033 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.63 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5597 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 15 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.94530 REMARK 3 B22 (A**2) : 18.01310 REMARK 3 B33 (A**2) : -16.06790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.330 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.419 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.257 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.432 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.263 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5802 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7890 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1945 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 972 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5802 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 751 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4338 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.16 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.19 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|42 - A|161 } REMARK 3 ORIGIN FOR THE GROUP (A): -19.2433 -0.3188 -6.7960 REMARK 3 T TENSOR REMARK 3 T11: -0.0930 T22: -0.1007 REMARK 3 T33: 0.1553 T12: -0.0342 REMARK 3 T13: 0.1058 T23: 0.0611 REMARK 3 L TENSOR REMARK 3 L11: 3.5054 L22: 2.2006 REMARK 3 L33: 0.5100 L12: -1.2747 REMARK 3 L13: -0.1832 L23: 0.4503 REMARK 3 S TENSOR REMARK 3 S11: 0.0759 S12: 0.2556 S13: 0.3263 REMARK 3 S21: -0.0833 S22: -0.0621 S23: -0.3829 REMARK 3 S31: -0.0737 S32: 0.1047 S33: -0.0138 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|162 - A|282 } REMARK 3 ORIGIN FOR THE GROUP (A): -22.5416 7.6845 10.9255 REMARK 3 T TENSOR REMARK 3 T11: -0.0522 T22: -0.1147 REMARK 3 T33: 0.2104 T12: -0.0506 REMARK 3 T13: -0.0074 T23: -0.0929 REMARK 3 L TENSOR REMARK 3 L11: 2.1550 L22: 2.5248 REMARK 3 L33: 1.1777 L12: -0.8993 REMARK 3 L13: 0.1938 L23: 0.3640 REMARK 3 S TENSOR REMARK 3 S11: -0.1163 S12: -0.3423 S13: 0.4165 REMARK 3 S21: 0.3748 S22: -0.0143 S23: -0.3873 REMARK 3 S31: 0.0163 S32: 0.1683 S33: 0.1306 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|283 - A|347 } REMARK 3 ORIGIN FOR THE GROUP (A): -33.7237 8.7392 0.0874 REMARK 3 T TENSOR REMARK 3 T11: 0.0063 T22: -0.1557 REMARK 3 T33: 0.2975 T12: -0.0108 REMARK 3 T13: 0.0733 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.4198 L22: 1.1203 REMARK 3 L33: 1.7623 L12: -0.0849 REMARK 3 L13: -0.6042 L23: 1.3726 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.1256 S13: 0.3740 REMARK 3 S21: -0.0137 S22: -0.1417 S23: -0.0345 REMARK 3 S31: -0.0780 S32: -0.0418 S33: 0.0897 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|348 - A|404 } REMARK 3 ORIGIN FOR THE GROUP (A): -30.5701 5.1773 -12.8835 REMARK 3 T TENSOR REMARK 3 T11: -0.0457 T22: -0.1382 REMARK 3 T33: 0.1383 T12: -0.0051 REMARK 3 T13: 0.0853 T23: 0.1607 REMARK 3 L TENSOR REMARK 3 L11: 1.6682 L22: 2.0452 REMARK 3 L33: 1.4659 L12: -0.4802 REMARK 3 L13: -0.1051 L23: 0.9235 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: 0.6369 S13: 0.3486 REMARK 3 S21: -0.3153 S22: -0.1335 S23: 0.0082 REMARK 3 S31: -0.1415 S32: -0.0301 S33: 0.1309 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { B|42 - B|161 } REMARK 3 ORIGIN FOR THE GROUP (A): -27.7388 14.7217 -42.9833 REMARK 3 T TENSOR REMARK 3 T11: 0.0931 T22: 0.0013 REMARK 3 T33: -0.2065 T12: -0.0180 REMARK 3 T13: -0.0472 T23: 0.0418 REMARK 3 L TENSOR REMARK 3 L11: 2.0600 L22: 7.7532 REMARK 3 L33: 0.2772 L12: 2.3537 REMARK 3 L13: -0.4010 L23: -0.5268 REMARK 3 S TENSOR REMARK 3 S11: 0.1262 S12: -0.1983 S13: -0.0734 REMARK 3 S21: -0.0966 S22: -0.0395 S23: -0.0856 REMARK 3 S31: 0.1429 S32: -0.0402 S33: -0.0867 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { B|162 - B|347 } REMARK 3 ORIGIN FOR THE GROUP (A): -26.5106 28.4393 -31.8687 REMARK 3 T TENSOR REMARK 3 T11: 0.0609 T22: 0.0812 REMARK 3 T33: -0.2003 T12: -0.1488 REMARK 3 T13: -0.0064 T23: -0.1123 REMARK 3 L TENSOR REMARK 3 L11: 1.7965 L22: 3.0359 REMARK 3 L33: 1.0956 L12: 0.4596 REMARK 3 L13: -0.3093 L23: -0.9388 REMARK 3 S TENSOR REMARK 3 S11: 0.3593 S12: -0.4330 S13: 0.2215 REMARK 3 S21: 0.4304 S22: -0.2639 S23: -0.1391 REMARK 3 S31: -0.1517 S32: -0.0915 S33: -0.0953 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { B|348 - B|402 } REMARK 3 ORIGIN FOR THE GROUP (A): -18.5162 23.9580 -52.0937 REMARK 3 T TENSOR REMARK 3 T11: 0.0921 T22: -0.0737 REMARK 3 T33: -0.1184 T12: 0.1361 REMARK 3 T13: 0.1490 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 2.3972 L22: 4.0704 REMARK 3 L33: 2.0774 L12: 1.3075 REMARK 3 L13: 0.3812 L23: -0.7145 REMARK 3 S TENSOR REMARK 3 S11: 0.1529 S12: 0.1669 S13: 0.0458 REMARK 3 S21: -0.8740 S22: -0.4096 S23: -0.7833 REMARK 3 S31: 0.4815 S32: 0.4023 S33: 0.2567 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IPW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1300036258. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NFPSS REMARK 200 BEAMLINE : BL18U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30117 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 29.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6OMI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.25 M POTASSIUM CITRATE TRIBASIC REMARK 280 MONOHYDRATE,18%PEG3350, COUNTER-DIFFUSION, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.39500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.89000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.16000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.89000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.39500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.16000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 370 REMARK 465 LYS A 371 REMARK 465 GLY A 372 REMARK 465 LEU B 403 REMARK 465 GLU B 404 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 75 CG CD OE1 OE2 REMARK 470 LYS A 147 CG CD CE NZ REMARK 470 LYS A 151 CG CD CE NZ REMARK 470 ARG A 209 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 ASP A 369 CG OD1 OD2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 VAL B 104 CG1 CG2 REMARK 470 SER B 169 OG REMARK 470 LYS B 183 CG CD CE NZ REMARK 470 TYR B 232 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 371 CG CD CE NZ REMARK 470 SER B 397 OG REMARK 470 LYS B 399 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 116 -84.41 -131.13 REMARK 500 SER A 169 49.34 -155.28 REMARK 500 TYR A 265 -59.12 68.54 REMARK 500 LEU A 295 47.71 -100.24 REMARK 500 ASN A 322 -109.88 38.39 REMARK 500 ASP A 341 34.49 -99.48 REMARK 500 ALA B 106 -43.50 74.49 REMARK 500 SER B 108 -29.20 -141.15 REMARK 500 ASP B 116 -72.20 -129.30 REMARK 500 SER B 169 -74.44 -131.79 REMARK 500 LEU B 295 54.56 -101.59 REMARK 500 ASN B 322 -96.80 25.92 REMARK 500 GLN B 330 -39.28 -131.31 REMARK 500 ASP B 369 44.42 -102.21 REMARK 500 ASN B 388 116.81 -161.17 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8IPW A 42 404 UNP A0A2S6F2R2_LEGPN DBREF2 8IPW A A0A2S6F2R2 42 404 DBREF1 8IPW B 42 404 UNP A0A2S6F2R2_LEGPN DBREF2 8IPW B A0A2S6F2R2 42 404 SEQRES 1 A 363 ALA TYR GLN LEU LEU LEU SER LYS GLU THR LEU ASN LYS SEQRES 2 A 363 ILE LEU GLN TYR LYS GLN ASN LEU GLU LYS GLY LEU ALA SEQRES 3 A 363 THR PRO GLY LYS PHE PHE LEU GLU GLU LEU SER LYS GLN SEQRES 4 A 363 GLU LYS SER ILE SER GLU MET ASP ILE THR THR PHE THR SEQRES 5 A 363 GLN LEU LEU ILE GLN SER LYS LYS PRO GLN VAL PHE ALA SEQRES 6 A 363 GLU SER GLN VAL TYR HIS ASP GLY THR ASP TRP THR LEU SEQRES 7 A 363 GLU GLU GLU SER ILE LEU GLY ASP VAL SER VAL ASN MET SEQRES 8 A 363 PRO VAL THR MET TYR ASN ASP GLY GLY HIS GLY SER SER SEQRES 9 A 363 PHE LYS ASN HIS PRO LYS PRO ILE SER GLY TYR LEU ALA SEQRES 10 A 363 TYR VAL PRO GLY ALA LEU LEU ALA SER GLY SER GLY PRO SEQRES 11 A 363 THR SER ASP MET LYS GLU VAL LEU ASP ASN GLY LYS LEU SEQRES 12 A 363 ASN GLN ASP LYS LEU ASN ALA LEU TYR GLU ARG ARG LEU SEQRES 13 A 363 LEU PRO GLN LEU ILE HIS PHE ASN GLU LEU ALA ARG GLN SEQRES 14 A 363 ASN GLU LYS GLN ALA ALA ILE THR ILE PRO GLY ILE GLY SEQRES 15 A 363 THR GLY CYS PHE SER GLY ALA TYR TYR ASP VAL ILE LYS SEQRES 16 A 363 PRO TYR VAL ARG ASN ALA LEU ILE HIS ILE LEU GLU LYS SEQRES 17 A 363 HIS LYS ASP SER LEU PRO TYR ILE ASP ILE ILE HIS TYR SEQRES 18 A 363 ASP PRO TYR MET GLY ASP GLU PRO ALA GLU LYS LYS ILE SEQRES 19 A 363 GLY HIS MET SER PHE ARG VAL SER PRO SER GLY VAL VAL SEQRES 20 A 363 ARG GLY THR THR GLY GLN LEU ASP TYR PRO LEU GLY SER SEQRES 21 A 363 ASN PRO ASP THR HIS ILE LEU VAL SER ILE VAL ALA TRP SEQRES 22 A 363 ASP HIS PHE SER TRP PRO GLY ASN ASP TYR TRP GLY GLY SEQRES 23 A 363 ALA ARG GLN THR ASP ASP GLY VAL LYS ALA ALA SER THR SEQRES 24 A 363 ASP THR MET GLY GLN VAL THR GLY ALA THR GLY VAL TYR SEQRES 25 A 363 ASP LYS LYS TRP GLY ARG TYR MET PRO PRO GLU SER PHE SEQRES 26 A 363 THR LYS ASP ARG LYS GLY MET SER ASP TRP GLY ASP TYR SEQRES 27 A 363 VAL ARG GLU ASN GLY ILE VAL PHE ASN GLY PRO VAL LEU SEQRES 28 A 363 ALA LEU ASP LYS SER GLY LYS LEU ASP THR LEU GLU SEQRES 1 B 363 ALA TYR GLN LEU LEU LEU SER LYS GLU THR LEU ASN LYS SEQRES 2 B 363 ILE LEU GLN TYR LYS GLN ASN LEU GLU LYS GLY LEU ALA SEQRES 3 B 363 THR PRO GLY LYS PHE PHE LEU GLU GLU LEU SER LYS GLN SEQRES 4 B 363 GLU LYS SER ILE SER GLU MET ASP ILE THR THR PHE THR SEQRES 5 B 363 GLN LEU LEU ILE GLN SER LYS LYS PRO GLN VAL PHE ALA SEQRES 6 B 363 GLU SER GLN VAL TYR HIS ASP GLY THR ASP TRP THR LEU SEQRES 7 B 363 GLU GLU GLU SER ILE LEU GLY ASP VAL SER VAL ASN MET SEQRES 8 B 363 PRO VAL THR MET TYR ASN ASP GLY GLY HIS GLY SER SER SEQRES 9 B 363 PHE LYS ASN HIS PRO LYS PRO ILE SER GLY TYR LEU ALA SEQRES 10 B 363 TYR VAL PRO GLY ALA LEU LEU ALA SER GLY SER GLY PRO SEQRES 11 B 363 THR SER ASP MET LYS GLU VAL LEU ASP ASN GLY LYS LEU SEQRES 12 B 363 ASN GLN ASP LYS LEU ASN ALA LEU TYR GLU ARG ARG LEU SEQRES 13 B 363 LEU PRO GLN LEU ILE HIS PHE ASN GLU LEU ALA ARG GLN SEQRES 14 B 363 ASN GLU LYS GLN ALA ALA ILE THR ILE PRO GLY ILE GLY SEQRES 15 B 363 THR GLY CYS PHE SER GLY ALA TYR TYR ASP VAL ILE LYS SEQRES 16 B 363 PRO TYR VAL ARG ASN ALA LEU ILE HIS ILE LEU GLU LYS SEQRES 17 B 363 HIS LYS ASP SER LEU PRO TYR ILE ASP ILE ILE HIS TYR SEQRES 18 B 363 ASP PRO TYR MET GLY ASP GLU PRO ALA GLU LYS LYS ILE SEQRES 19 B 363 GLY HIS MET SER PHE ARG VAL SER PRO SER GLY VAL VAL SEQRES 20 B 363 ARG GLY THR THR GLY GLN LEU ASP TYR PRO LEU GLY SER SEQRES 21 B 363 ASN PRO ASP THR HIS ILE LEU VAL SER ILE VAL ALA TRP SEQRES 22 B 363 ASP HIS PHE SER TRP PRO GLY ASN ASP TYR TRP GLY GLY SEQRES 23 B 363 ALA ARG GLN THR ASP ASP GLY VAL LYS ALA ALA SER THR SEQRES 24 B 363 ASP THR MET GLY GLN VAL THR GLY ALA THR GLY VAL TYR SEQRES 25 B 363 ASP LYS LYS TRP GLY ARG TYR MET PRO PRO GLU SER PHE SEQRES 26 B 363 THR LYS ASP ARG LYS GLY MET SER ASP TRP GLY ASP TYR SEQRES 27 B 363 VAL ARG GLU ASN GLY ILE VAL PHE ASN GLY PRO VAL LEU SEQRES 28 B 363 ALA LEU ASP LYS SER GLY LYS LEU ASP THR LEU GLU HET AR6 A 501 36 HET AR6 B 501 36 HETNAM AR6 [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY- HETNAM 2 AR6 OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5- HETNAM 3 AR6 TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN HETNAM 4 AR6 PHOSPHATE HETSYN AR6 ADENOSINE-5-DIPHOSPHORIBOSE FORMUL 3 AR6 2(C15 H23 N5 O14 P2) FORMUL 5 HOH *15(H2 O) HELIX 1 AA1 SER A 48 LYS A 64 1 17 HELIX 2 AA2 GLY A 70 LYS A 79 1 10 HELIX 3 AA3 ASP A 88 SER A 99 1 12 HELIX 4 AA4 THR A 118 ASP A 127 1 10 HELIX 5 AA5 HIS A 142 PHE A 146 5 5 HELIX 6 AA6 THR A 172 VAL A 178 1 7 HELIX 7 AA7 ASN A 185 ASN A 211 1 27 HELIX 8 AA8 GLY A 225 TYR A 232 5 8 HELIX 9 AA9 VAL A 234 HIS A 250 1 17 HELIX 10 AB1 LYS A 251 LEU A 254 5 4 HELIX 11 AB2 GLY A 321 GLY A 327 5 7 HELIX 12 AB3 THR A 331 SER A 339 1 9 HELIX 13 AB4 ASP A 341 GLY A 348 1 8 HELIX 14 AB5 PRO A 363 LYS A 368 1 6 HELIX 15 AB6 ASP A 375 GLY A 384 1 10 HELIX 16 AB7 SER B 48 LYS B 64 1 17 HELIX 17 AB8 GLY B 70 SER B 78 1 9 HELIX 18 AB9 ASP B 88 SER B 99 1 12 HELIX 19 AC1 THR B 118 VAL B 128 1 11 HELIX 20 AC2 THR B 172 VAL B 178 1 7 HELIX 21 AC3 ASN B 185 GLN B 210 1 26 HELIX 22 AC4 GLY B 225 TYR B 232 5 8 HELIX 23 AC5 VAL B 234 HIS B 250 1 17 HELIX 24 AC6 LYS B 251 LEU B 254 5 4 HELIX 25 AC7 GLY B 321 GLY B 327 5 7 HELIX 26 AC8 THR B 331 SER B 339 1 9 HELIX 27 AC9 ASP B 341 GLY B 348 1 8 HELIX 28 AD1 PRO B 363 LYS B 368 1 6 HELIX 29 AD2 ASP B 375 GLY B 384 1 10 SHEET 1 AA110 ALA A 271 ILE A 275 0 SHEET 2 AA110 MET A 278 VAL A 282 -1 O PHE A 280 N LYS A 273 SHEET 3 AA110 ILE A 257 ASP A 263 1 N TYR A 262 O ARG A 281 SHEET 4 AA110 GLN A 214 PRO A 220 1 N ILE A 217 O HIS A 261 SHEET 5 AA110 HIS A 306 TRP A 314 1 O ILE A 311 N THR A 218 SHEET 6 AA110 ASN A 148 PRO A 161 1 N VAL A 160 O VAL A 312 SHEET 7 AA110 SER A 129 ASN A 138 -1 N MET A 136 O ILE A 153 SHEET 8 AA110 GLN A 44 LEU A 47 -1 N LEU A 46 O SER A 129 SHEET 9 AA110 VAL A 391 LEU A 394 1 O LEU A 392 N LEU A 45 SHEET 10 AA110 LEU A 400 ASP A 401 -1 O ASP A 401 N ALA A 393 SHEET 1 AA2 2 LEU A 179 ASP A 180 0 SHEET 2 AA2 2 LYS A 183 LEU A 184 -1 O LYS A 183 N ASP A 180 SHEET 1 AA3 2 VAL A 352 ASP A 354 0 SHEET 2 AA3 2 ARG A 359 MET A 361 -1 O MET A 361 N VAL A 352 SHEET 1 AA410 ALA B 271 ILE B 275 0 SHEET 2 AA410 MET B 278 VAL B 282 -1 O VAL B 282 N ALA B 271 SHEET 3 AA410 ILE B 257 ASP B 263 1 N ILE B 260 O SER B 279 SHEET 4 AA410 GLN B 214 PRO B 220 1 N ILE B 219 O ASP B 263 SHEET 5 AA410 HIS B 306 TRP B 314 1 O ILE B 311 N THR B 218 SHEET 6 AA410 ASN B 148 PRO B 161 1 N VAL B 160 O VAL B 312 SHEET 7 AA410 SER B 129 ASN B 138 -1 N VAL B 130 O TYR B 159 SHEET 8 AA410 GLN B 44 LEU B 47 -1 N LEU B 46 O SER B 129 SHEET 9 AA410 VAL B 391 ASP B 395 1 O LEU B 394 N LEU B 47 SHEET 10 AA410 GLY B 398 LEU B 400 -1 O LEU B 400 N ALA B 393 SHEET 1 AA5 2 LEU B 179 ASP B 180 0 SHEET 2 AA5 2 LYS B 183 LEU B 184 -1 O LYS B 183 N ASP B 180 SHEET 1 AA6 2 VAL B 352 ASP B 354 0 SHEET 2 AA6 2 ARG B 359 MET B 361 -1 O MET B 361 N VAL B 352 CRYST1 50.790 108.320 129.780 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019689 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009232 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007705 0.00000