HEADER PROTEIN BINDING 22-MAR-23 8IT9 TITLE CO-CRYSTAL STRUCTURE OF FTO BOUND TO 22 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE FTO; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FAT MASS AND OBESITY-ASSOCIATED PROTEIN,U6 SMALL NUCLEAR RNA COMPND 5 (2'-O-METHYLADENOSINE-N(6)-)-DEMETHYLASE FTO,U6 SMALL NUCLEAR RNA COMPND 6 N(6)-METHYLADENOSINE-DEMETHYLASE FTO,MRNA (2'-O-METHYLADENOSINE-N(6)- COMPND 7 )-DEMETHYLASE FTO,M6A(M)-DEMETHYLASE FTO,MRNA N(6)-METHYLADENOSINE COMPND 8 DEMETHYLASE FTO,TRNA N1-METHYL ADENINE DEMETHYLASE FTO; COMPND 9 EC: 1.14.11.-,1.14.11.53; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FTO, KIAA1752; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RNA DEMETHYLASE, RNA BINDING PROTEIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.-G.YANG,J.H.GAN REVDAT 1 14-FEB-24 8IT9 0 JRNL AUTH P.XIAO,Z.DUAN,Z.LIU,L.CHEN,D.ZHANG,L.LIU,C.ZHOU,J.GAN, JRNL AUTH 2 Z.DONG,C.G.YANG JRNL TITL RATIONAL DESIGN OF RNA DEMETHYLASE FTO INHIBITORS WITH JRNL TITL 2 ENHANCED ANTILEUKEMIA DRUG-LIKE PROPERTIES. JRNL REF J.MED.CHEM. V. 66 9731 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37418628 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00543 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 33131 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1614 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2469 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3386 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 78 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : -0.13000 REMARK 3 B33 (A**2) : 0.41000 REMARK 3 B12 (A**2) : -0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.207 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.170 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.174 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3519 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3084 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4795 ; 1.075 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7122 ; 0.894 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 432 ; 5.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;32.419 ;24.233 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 541 ;11.949 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;10.213 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3951 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 733 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1734 ; 0.993 ; 4.465 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1733 ; 0.993 ; 4.464 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2161 ; 1.767 ; 6.682 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2162 ; 1.767 ; 6.683 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1785 ; 0.763 ; 4.383 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1781 ; 0.760 ; 4.381 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2630 ; 1.327 ; 6.566 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3880 ; 3.407 ;51.069 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3880 ; 3.406 ;51.068 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8IT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 30-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1300036403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-AUG-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL02U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34944 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 71.090 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE, PH 5.4, 11.5% REMARK 280 (W/V) POLYETHYLENE GLYCOL (PEG) 3350, AND 8% ISOPROPANOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 71.09450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.04643 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.11933 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 71.09450 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 41.04643 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.11933 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 71.09450 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 41.04643 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.11933 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.09286 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 56.23867 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 82.09286 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 56.23867 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 82.09286 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 56.23867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 SER A 21 REMARK 465 SER A 22 REMARK 465 GLY A 23 REMARK 465 LEU A 24 REMARK 465 VAL A 25 REMARK 465 PRO A 26 REMARK 465 ARG A 27 REMARK 465 SER A 123 REMARK 465 ASN A 124 REMARK 465 ILE A 125 REMARK 465 LYS A 126 REMARK 465 HIS A 127 REMARK 465 THR A 128 REMARK 465 ASN A 164 REMARK 465 GLU A 165 REMARK 465 ASP A 166 REMARK 465 ALA A 167 REMARK 465 VAL A 168 REMARK 465 PRO A 169 REMARK 465 LEU A 170 REMARK 465 CYS A 171 REMARK 465 MET A 172 REMARK 465 SER A 173 REMARK 465 ALA A 174 REMARK 465 ASP A 175 REMARK 465 PHE A 176 REMARK 465 PRO A 177 REMARK 465 ARG A 178 REMARK 465 VAL A 179 REMARK 465 GLY A 180 REMARK 465 MET A 181 REMARK 465 GLY A 182 REMARK 465 SER A 183 REMARK 465 SER A 184 REMARK 465 TYR A 185 REMARK 465 ASN A 186 REMARK 465 GLY A 187 REMARK 465 GLY A 251 REMARK 465 PRO A 252 REMARK 465 GLU A 253 REMARK 465 GLU A 254 REMARK 465 GLU A 255 REMARK 465 SER A 256 REMARK 465 GLU A 257 REMARK 465 ASP A 258 REMARK 465 ASP A 259 REMARK 465 SER A 260 REMARK 465 HIS A 261 REMARK 465 ALA A 503 REMARK 465 LYS A 504 REMARK 465 PRO A 505 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 34 CD CE NZ REMARK 470 GLU A 59 CD OE1 OE2 REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 LYS A 88 CD CE NZ REMARK 470 VAL A 120 CG1 CG2 REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 LYS A 141 CE NZ REMARK 470 GLN A 152 CG CD OE1 NE2 REMARK 470 LYS A 160 CG CD CE NZ REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 GLN A 188 CG CD OE1 NE2 REMARK 470 ASP A 189 CG OD1 OD2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 GLN A 210 CG CD OE1 NE2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 LEU A 262 CG CD1 CD2 REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 ASP A 353 CG OD1 OD2 REMARK 470 ASN A 387 CG OD1 ND2 REMARK 470 TYR A 389 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 390 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 408 CG CD CE NZ REMARK 470 LYS A 422 CD CE NZ REMARK 470 GLU A 424 CG CD OE1 OE2 REMARK 470 GLN A 430 CG CD OE1 NE2 REMARK 470 ARG A 450 NE CZ NH1 NH2 REMARK 470 ARG A 459 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 462 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 467 CG OD1 OD2 REMARK 470 LYS A 469 CG CD CE NZ REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 ASP A 479 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 299 -120.97 58.38 REMARK 500 TRP A 378 -63.09 -122.75 REMARK 500 CYS A 472 46.10 -90.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 8IT9 A 32 505 UNP Q9C0B1 FTO_HUMAN 32 505 SEQADV 8IT9 HIS A 15 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 16 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 17 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 18 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 19 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 20 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 SER A 21 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 SER A 22 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 GLY A 23 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 LEU A 24 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 VAL A 25 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 PRO A 26 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 ARG A 27 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 GLY A 28 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 SER A 29 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 HIS A 30 UNP Q9C0B1 EXPRESSION TAG SEQADV 8IT9 MET A 31 UNP Q9C0B1 EXPRESSION TAG SEQRES 1 A 491 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 491 GLY SER HIS MET THR PRO LYS ASP ASP GLU PHE TYR GLN SEQRES 3 A 491 GLN TRP GLN LEU LYS TYR PRO LYS LEU ILE LEU ARG GLU SEQRES 4 A 491 ALA SER SER VAL SER GLU GLU LEU HIS LYS GLU VAL GLN SEQRES 5 A 491 GLU ALA PHE LEU THR LEU HIS LYS HIS GLY CYS LEU PHE SEQRES 6 A 491 ARG ASP LEU VAL ARG ILE GLN GLY LYS ASP LEU LEU THR SEQRES 7 A 491 PRO VAL SER ARG ILE LEU ILE GLY ASN PRO GLY CYS THR SEQRES 8 A 491 TYR LYS TYR LEU ASN THR ARG LEU PHE THR VAL PRO TRP SEQRES 9 A 491 PRO VAL LYS GLY SER ASN ILE LYS HIS THR GLU ALA GLU SEQRES 10 A 491 ILE ALA ALA ALA CYS GLU THR PHE LEU LYS LEU ASN ASP SEQRES 11 A 491 TYR LEU GLN ILE GLU THR ILE GLN ALA LEU GLU GLU LEU SEQRES 12 A 491 ALA ALA LYS GLU LYS ALA ASN GLU ASP ALA VAL PRO LEU SEQRES 13 A 491 CYS MET SER ALA ASP PHE PRO ARG VAL GLY MET GLY SER SEQRES 14 A 491 SER TYR ASN GLY GLN ASP GLU VAL ASP ILE LYS SER ARG SEQRES 15 A 491 ALA ALA TYR ASN VAL THR LEU LEU ASN PHE MET ASP PRO SEQRES 16 A 491 GLN LYS MET PRO TYR LEU LYS GLU GLU PRO TYR PHE GLY SEQRES 17 A 491 MET GLY LYS MET ALA VAL SER TRP HIS HIS ASP GLU ASN SEQRES 18 A 491 LEU VAL ASP ARG SER ALA VAL ALA VAL TYR SER TYR SER SEQRES 19 A 491 CYS GLU GLY PRO GLU GLU GLU SER GLU ASP ASP SER HIS SEQRES 20 A 491 LEU GLU GLY ARG ASP PRO ASP ILE TRP HIS VAL GLY PHE SEQRES 21 A 491 LYS ILE SER TRP ASP ILE GLU THR PRO GLY LEU ALA ILE SEQRES 22 A 491 PRO LEU HIS GLN GLY ASP CYS TYR PHE MET LEU ASP ASP SEQRES 23 A 491 LEU ASN ALA THR HIS GLN HIS CYS VAL LEU ALA GLY SER SEQRES 24 A 491 GLN PRO ARG PHE SER SER THR HIS ARG VAL ALA GLU CYS SEQRES 25 A 491 SER THR GLY THR LEU ASP TYR ILE LEU GLN ARG CYS GLN SEQRES 26 A 491 LEU ALA LEU GLN ASN VAL CYS ASP ASP VAL ASP ASN ASP SEQRES 27 A 491 ASP VAL SER LEU LYS SER PHE GLU PRO ALA VAL LEU LYS SEQRES 28 A 491 GLN GLY GLU GLU ILE HIS ASN GLU VAL GLU PHE GLU TRP SEQRES 29 A 491 LEU ARG GLN PHE TRP PHE GLN GLY ASN ARG TYR ARG LYS SEQRES 30 A 491 CYS THR ASP TRP TRP CYS GLN PRO MET ALA GLN LEU GLU SEQRES 31 A 491 ALA LEU TRP LYS LYS MET GLU GLY VAL THR ASN ALA VAL SEQRES 32 A 491 LEU HIS GLU VAL LYS ARG GLU GLY LEU PRO VAL GLU GLN SEQRES 33 A 491 ARG ASN GLU ILE LEU THR ALA ILE LEU ALA SER LEU THR SEQRES 34 A 491 ALA ARG GLN ASN LEU ARG ARG GLU TRP HIS ALA ARG CYS SEQRES 35 A 491 GLN SER ARG ILE ALA ARG THR LEU PRO ALA ASP GLN LYS SEQRES 36 A 491 PRO GLU CYS ARG PRO TYR TRP GLU LYS ASP ASP ALA SER SEQRES 37 A 491 MET PRO LEU PRO PHE ASP LEU THR ASP ILE VAL SER GLU SEQRES 38 A 491 LEU ARG GLY GLN LEU LEU GLU ALA LYS PRO HET ZL6 A 601 34 HET AKG A 602 10 HETNAM ZL6 2-[(2,6-DIETHYL-4-PYRIDIN-4-YL-PHENYL)AMINO]-6-(1,4- HETNAM 2 ZL6 OXAZEPAN-4-YLMETHYL)BENZOIC ACID HETNAM AKG 2-OXOGLUTARIC ACID FORMUL 2 ZL6 C28 H33 N3 O3 FORMUL 3 AKG C5 H6 O5 FORMUL 4 HOH *78(H2 O) HELIX 1 AA1 GLU A 37 TYR A 46 1 10 HELIX 2 AA2 GLU A 53 VAL A 57 5 5 HELIX 3 AA3 SER A 58 GLY A 76 1 19 HELIX 4 AA4 ALA A 130 ALA A 163 1 34 HELIX 5 AA5 ASP A 189 ALA A 197 1 9 HELIX 6 AA6 ASP A 208 MET A 212 5 5 HELIX 7 AA7 ASP A 300 THR A 304 1 5 HELIX 8 AA8 THR A 330 LEU A 342 1 13 HELIX 9 AA9 GLN A 343 VAL A 345 5 3 HELIX 10 AB1 GLU A 360 GLU A 377 1 18 HELIX 11 AB2 TRP A 378 GLY A 386 1 9 HELIX 12 AB3 ARG A 388 CYS A 392 5 5 HELIX 13 AB4 TRP A 396 LYS A 422 1 27 HELIX 14 AB5 PRO A 427 GLN A 457 1 31 HELIX 15 AB6 SER A 458 THR A 463 1 6 HELIX 16 AB7 PRO A 465 LYS A 469 5 5 HELIX 17 AB8 LEU A 489 LEU A 501 1 13 SHEET 1 AA1 5 HIS A 30 MET A 31 0 SHEET 2 AA1 5 GLY A 284 PRO A 288 1 O ALA A 286 N MET A 31 SHEET 3 AA1 5 HIS A 271 ILE A 276 -1 N VAL A 272 O ILE A 287 SHEET 4 AA1 5 HIS A 305 LEU A 310 -1 O CYS A 308 N GLY A 273 SHEET 5 AA1 5 MET A 226 HIS A 231 -1 N ALA A 227 O VAL A 309 SHEET 1 AA2 7 LEU A 49 ARG A 52 0 SHEET 2 AA2 7 CYS A 294 MET A 297 -1 O CYS A 294 N ARG A 52 SHEET 3 AA2 7 VAL A 242 SER A 248 -1 N VAL A 242 O MET A 297 SHEET 4 AA2 7 ARG A 316 ARG A 322 -1 O HIS A 321 N ALA A 243 SHEET 5 AA2 7 VAL A 201 MET A 207 -1 N ASN A 205 O SER A 318 SHEET 6 AA2 7 SER A 95 GLY A 100 -1 N ILE A 99 O THR A 202 SHEET 7 AA2 7 VAL A 116 PRO A 117 1 O VAL A 116 N LEU A 98 SHEET 1 AA3 2 LEU A 82 ILE A 85 0 SHEET 2 AA3 2 LYS A 88 LEU A 91 -1 O LEU A 90 N VAL A 83 SHEET 1 AA4 2 THR A 105 TYR A 108 0 SHEET 2 AA4 2 THR A 111 PHE A 114 -1 O LEU A 113 N TYR A 106 CISPEP 1 ARG A 473 PRO A 474 0 -0.31 CRYST1 142.189 142.189 84.358 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007033 0.004060 0.000000 0.00000 SCALE2 0.000000 0.008121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011854 0.00000