HEADER METAL BINDING PROTEIN 28-MAR-23 8IVK TITLE CRYOGENIC TEMPERATURE CRYSTAL STRUCTURE OF ESCHERICHIA COLI CYAY COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON-SULFUR CLUSTER ASSEMBLY PROTEIN CYAY; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: CYAY; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS CYAY, ESCHERICHIA COLI, FRATAXIN, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.SHAFIEI,H.DEMIRCI REVDAT 1 10-MAY-23 8IVK 0 JRNL AUTH A.SHAFIEI,H.DEMIRCI JRNL TITL CRYOGENIC TEMPERATURE CRYSTAL STRUCTURE OF ESCHERICHIA COLI JRNL TITL 2 CYAY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 18718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1867 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.2300 - 3.5200 1.00 1414 159 0.1614 0.2277 REMARK 3 2 3.5200 - 2.8000 1.00 1319 151 0.1691 0.2242 REMARK 3 3 2.8000 - 2.4500 1.00 1314 148 0.1821 0.1925 REMARK 3 4 2.4400 - 2.2200 1.00 1292 142 0.1781 0.1991 REMARK 3 5 2.2200 - 2.0600 1.00 1306 147 0.1546 0.2026 REMARK 3 6 2.0600 - 1.9400 1.00 1271 140 0.1664 0.2085 REMARK 3 7 1.9400 - 1.8400 1.00 1287 140 0.1726 0.1704 REMARK 3 8 1.8400 - 1.7600 1.00 1286 143 0.1781 0.2405 REMARK 3 9 1.7600 - 1.7000 1.00 1293 137 0.1841 0.2175 REMARK 3 10 1.7000 - 1.6400 1.00 1252 139 0.2037 0.2509 REMARK 3 11 1.6400 - 1.5900 1.00 1271 142 0.2094 0.2564 REMARK 3 12 1.5900 - 1.5400 1.00 1257 136 0.2194 0.2611 REMARK 3 13 1.5400 - 1.5000 0.99 1289 143 0.2424 0.2459 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 NULL REMARK 3 ANGLE : 1.482 NULL REMARK 3 CHIRALITY : 0.099 129 REMARK 3 PLANARITY : 0.017 171 REMARK 3 DIHEDRAL : 6.285 120 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2375 -4.2717 -14.7896 REMARK 3 T TENSOR REMARK 3 T11: 0.0742 T22: 0.0544 REMARK 3 T33: 0.1228 T12: 0.0069 REMARK 3 T13: 0.0142 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 3.7678 L22: 3.4942 REMARK 3 L33: 5.7280 L12: 1.6162 REMARK 3 L13: 3.5562 L23: 2.4727 REMARK 3 S TENSOR REMARK 3 S11: 0.0119 S12: 0.1553 S13: -0.0838 REMARK 3 S21: 0.0895 S22: 0.0756 S23: -0.0996 REMARK 3 S31: 0.0567 S32: 0.2548 S33: -0.1169 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7046 6.3630 -1.3869 REMARK 3 T TENSOR REMARK 3 T11: 0.1011 T22: 0.0776 REMARK 3 T33: 0.0961 T12: -0.0156 REMARK 3 T13: -0.0215 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.7474 L22: 2.1923 REMARK 3 L33: 2.1250 L12: 1.1989 REMARK 3 L13: 1.0124 L23: 1.2405 REMARK 3 S TENSOR REMARK 3 S11: 0.1768 S12: -0.1114 S13: -0.1241 REMARK 3 S21: 0.2826 S22: -0.0477 S23: -0.3130 REMARK 3 S31: 0.1062 S32: 0.0558 S33: -0.0946 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 54 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1369 5.0652 -12.1810 REMARK 3 T TENSOR REMARK 3 T11: 0.0809 T22: 0.0882 REMARK 3 T33: 0.0758 T12: -0.0135 REMARK 3 T13: -0.0047 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 2.3559 L22: 4.7224 REMARK 3 L33: 5.9644 L12: 1.5871 REMARK 3 L13: 2.1156 L23: 3.8629 REMARK 3 S TENSOR REMARK 3 S11: 0.1305 S12: -0.0767 S13: -0.0444 REMARK 3 S21: -0.1039 S22: -0.1025 S23: -0.0900 REMARK 3 S31: 0.0473 S32: -0.2968 S33: 0.0537 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 55 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4834 7.1784 -19.6401 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.0689 REMARK 3 T33: 0.0713 T12: 0.0063 REMARK 3 T13: -0.0109 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 2.5689 L22: 3.3260 REMARK 3 L33: 4.9341 L12: 0.2131 REMARK 3 L13: 0.7008 L23: 1.7674 REMARK 3 S TENSOR REMARK 3 S11: 0.0351 S12: 0.2514 S13: -0.0365 REMARK 3 S21: -0.1527 S22: 0.0444 S23: 0.0113 REMARK 3 S31: -0.0515 S32: 0.0661 S33: -0.0248 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.8219 3.6777 -23.7907 REMARK 3 T TENSOR REMARK 3 T11: 0.1154 T22: 0.1613 REMARK 3 T33: 0.1857 T12: 0.0183 REMARK 3 T13: 0.0513 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.9644 L22: 3.8172 REMARK 3 L33: 6.3290 L12: -0.3128 REMARK 3 L13: 0.7973 L23: 0.2816 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.5145 S13: -0.3398 REMARK 3 S21: -0.2401 S22: -0.0959 S23: -0.5416 REMARK 3 S31: 0.4971 S32: 0.4457 S33: -0.0549 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 81 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8859 12.3248 -24.0598 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.1363 REMARK 3 T33: 0.1360 T12: -0.0231 REMARK 3 T13: -0.0185 T23: 0.0403 REMARK 3 L TENSOR REMARK 3 L11: 3.6148 L22: 3.6585 REMARK 3 L33: 3.4367 L12: -0.5601 REMARK 3 L13: 3.3103 L23: -0.7302 REMARK 3 S TENSOR REMARK 3 S11: -0.2839 S12: 0.2130 S13: 0.7127 REMARK 3 S21: -0.1981 S22: 0.1637 S23: 0.1908 REMARK 3 S31: -0.5568 S32: -0.1947 S33: 0.2468 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4807 12.1366 -11.2057 REMARK 3 T TENSOR REMARK 3 T11: 0.0591 T22: 0.0543 REMARK 3 T33: 0.0754 T12: -0.0217 REMARK 3 T13: 0.0057 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.1479 L22: 0.5885 REMARK 3 L33: 7.4863 L12: 0.2063 REMARK 3 L13: 0.3475 L23: 2.0455 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: 0.0030 S13: 0.0012 REMARK 3 S21: -0.0827 S22: -0.0260 S23: -0.1681 REMARK 3 S31: -0.2104 S32: 0.1410 S33: 0.0257 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4548 9.0103 -7.3842 REMARK 3 T TENSOR REMARK 3 T11: 0.0934 T22: 0.1396 REMARK 3 T33: 0.1480 T12: -0.0103 REMARK 3 T13: 0.0170 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.9924 L22: 2.7400 REMARK 3 L33: 4.6091 L12: 0.5850 REMARK 3 L13: 1.8544 L23: 0.4886 REMARK 3 S TENSOR REMARK 3 S11: -0.0485 S12: -0.0324 S13: -0.3503 REMARK 3 S21: 0.1149 S22: 0.2042 S23: -0.3925 REMARK 3 S31: 0.4815 S32: 0.3613 S33: -0.1730 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IVK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-23. REMARK 100 THE DEPOSITION ID IS D_1300036595. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU PHOTONJET-R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : RIGAKU HYPIX-3000 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO 1.171.42.35A REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO 1.171.42.35A REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18719 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 22.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CITRIC ACID, 4.0 M SODIUM REMARK 280 CHLORIDE (PH 4.0), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.61667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.80833 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.80833 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 65.61667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 104 O HOH A 201 1.90 REMARK 500 O HOH A 214 O HOH A 342 2.02 REMARK 500 O HOH A 293 O HOH A 341 2.08 REMARK 500 O HOH A 206 O HOH A 228 2.11 REMARK 500 NH1 ARG A 106 O HOH A 202 2.17 REMARK 500 O HOH A 311 O HOH A 343 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 201 O HOH A 220 6554 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN A 66 CG GLN A 66 CD 0.146 REMARK 500 ARG A 106 CB ARG A 106 CG -0.212 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 76 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 8IVK A 1 106 UNP C3SKF0 C3SKF0_ECOLX 1 106 SEQRES 1 A 106 MET ASN ASP SER GLU PHE HIS ARG LEU ALA ASP GLN LEU SEQRES 2 A 106 TRP LEU THR ILE GLU GLU ARG LEU ASP ASP TRP ASP GLY SEQRES 3 A 106 ASP SER ASP ILE ASP CYS GLU ILE ASN GLY GLY VAL LEU SEQRES 4 A 106 THR ILE THR PHE GLU ASN GLY SER LYS ILE ILE ILE ASN SEQRES 5 A 106 ARG GLN GLU PRO LEU HIS GLN VAL TRP LEU ALA THR LYS SEQRES 6 A 106 GLN GLY GLY TYR HIS PHE ASP LEU LYS GLY ASP GLU TRP SEQRES 7 A 106 ILE CYS ASP ARG SER GLY GLU THR PHE TRP ASP LEU LEU SEQRES 8 A 106 GLU GLN ALA ALA THR GLN GLN ALA GLY GLU THR VAL SER SEQRES 9 A 106 PHE ARG FORMUL 2 HOH *159(H2 O) HELIX 1 AA1 ASN A 2 TRP A 24 1 23 HELIX 2 AA2 THR A 86 GLY A 100 1 15 SHEET 1 AA1 6 ASP A 31 ASN A 35 0 SHEET 2 AA1 6 VAL A 38 THR A 42 -1 O THR A 42 N ASP A 31 SHEET 3 AA1 6 LYS A 48 GLN A 54 -1 O ILE A 49 N ILE A 41 SHEET 4 AA1 6 GLN A 59 ALA A 63 -1 O TRP A 61 N ASN A 52 SHEET 5 AA1 6 GLY A 68 LYS A 74 -1 O TYR A 69 N LEU A 62 SHEET 6 AA1 6 GLU A 77 CYS A 80 -1 O ILE A 79 N ASP A 72 CRYST1 44.456 44.456 98.425 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022494 0.012987 0.000000 0.00000 SCALE2 0.000000 0.025974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010160 0.00000