HEADER STRUCTURAL PROTEIN 29-MAR-23 8IWC TITLE CRYSTAL STRUCTURE OF Q9PR55 AT PH 6.0 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN UU089.1; COMPND 3 CHAIN: A, B, C, D, E, F, G, H; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UREAPLASMA PARVUM SEROVAR 3 STR. ATCC 700970; SOURCE 3 ORGANISM_TAXID: 273119; SOURCE 4 ATCC: 700970; SOURCE 5 GENE: UU089.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS KNOTTED PROTEIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.F.HSU,T.P.KO,K.F.HUANG,Y.R.CHEN,J.S.HUANG,S.T.D.HSU REVDAT 1 07-FEB-24 8IWC 0 JRNL AUTH M.F.HSU,M.K.SRIRAMOJU,C.H.LAI,Y.R.CHEN,J.S.HUANG,T.P.KO, JRNL AUTH 2 K.F.HUANG,S.D.HSU JRNL TITL STRUCTURE, DYNAMICS, AND STABILITY OF THE SMALLEST AND MOST JRNL TITL 2 COMPLEX 7 1 PROTEIN KNOT. JRNL REF J.BIOL.CHEM. V. 300 05553 2023 JRNL REFN ESSN 1083-351X JRNL PMID 38072060 JRNL DOI 10.1016/J.JBC.2023.105553 REMARK 2 REMARK 2 RESOLUTION. 2.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 19760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.2000 - 4.6400 0.99 3251 176 0.1868 0.2165 REMARK 3 2 4.6400 - 3.6900 1.00 3178 164 0.1489 0.1904 REMARK 3 3 3.6900 - 3.2200 1.00 3174 165 0.1750 0.2481 REMARK 3 4 3.2200 - 2.9300 0.98 3101 165 0.2075 0.2704 REMARK 3 5 2.9300 - 2.7200 0.80 2511 132 0.2110 0.2563 REMARK 3 6 2.7200 - 2.5600 0.63 1971 114 0.2346 0.2570 REMARK 3 7 2.5600 - 2.4300 0.50 1577 81 0.2347 0.3214 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.246 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5220 REMARK 3 ANGLE : 0.563 7017 REMARK 3 CHIRALITY : 0.048 768 REMARK 3 PLANARITY : 0.003 877 REMARK 3 DIHEDRAL : 12.165 1925 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 11:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.175 -2.024 7.160 REMARK 3 T TENSOR REMARK 3 T11: 0.1219 T22: -0.2294 REMARK 3 T33: -0.0076 T12: 0.0765 REMARK 3 T13: -0.0533 T23: 0.0881 REMARK 3 L TENSOR REMARK 3 L11: 9.9851 L22: 5.4422 REMARK 3 L33: 8.5883 L12: 1.2675 REMARK 3 L13: -4.7416 L23: 1.9986 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -1.2173 S13: -0.0826 REMARK 3 S21: 0.3981 S22: -0.1592 S23: 0.3947 REMARK 3 S31: 0.3082 S32: 0.3650 S33: -0.1441 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 11:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.043 -2.868 -2.440 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: -0.0816 REMARK 3 T33: 0.3255 T12: 0.0130 REMARK 3 T13: -0.0868 T23: -0.0515 REMARK 3 L TENSOR REMARK 3 L11: 11.1822 L22: 9.6959 REMARK 3 L33: 4.1912 L12: -0.7475 REMARK 3 L13: -3.2957 L23: 1.0962 REMARK 3 S TENSOR REMARK 3 S11: 0.0150 S12: -0.1756 S13: 0.2895 REMARK 3 S21: 0.1412 S22: -0.0834 S23: -1.0062 REMARK 3 S31: -0.3083 S32: -0.0832 S33: 0.0075 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 11:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.055 -2.466 18.664 REMARK 3 T TENSOR REMARK 3 T11: 0.2813 T22: 0.3390 REMARK 3 T33: 0.2588 T12: -0.0807 REMARK 3 T13: 0.0737 T23: 0.0331 REMARK 3 L TENSOR REMARK 3 L11: 9.0565 L22: 6.7397 REMARK 3 L33: 4.9939 L12: 0.9725 REMARK 3 L13: -2.6313 L23: 0.2167 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: 0.5741 S13: 0.3268 REMARK 3 S21: 0.0882 S22: 0.1692 S23: 0.5768 REMARK 3 S31: 0.0492 S32: -0.1541 S33: 0.0059 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 12:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.763 -1.631 -10.179 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.4779 REMARK 3 T33: 0.7949 T12: -0.0288 REMARK 3 T13: -0.0143 T23: 0.0671 REMARK 3 L TENSOR REMARK 3 L11: 7.9212 L22: 5.5930 REMARK 3 L33: 5.2872 L12: 2.8918 REMARK 3 L13: -4.3173 L23: -2.1518 REMARK 3 S TENSOR REMARK 3 S11: -0.2232 S12: 0.3007 S13: 0.0093 REMARK 3 S21: -0.3356 S22: 0.4422 S23: 0.4216 REMARK 3 S31: 0.2057 S32: -0.4092 S33: 0.0010 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN E AND RESID 12:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.914 -1.978 28.312 REMARK 3 T TENSOR REMARK 3 T11: 0.2802 T22: 0.3754 REMARK 3 T33: 0.3026 T12: 0.0251 REMARK 3 T13: 0.0783 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 7.7065 L22: 5.1940 REMARK 3 L33: 5.9231 L12: -0.3144 REMARK 3 L13: -0.3894 L23: -0.3746 REMARK 3 S TENSOR REMARK 3 S11: -0.2725 S12: -0.5629 S13: -0.0869 REMARK 3 S21: -0.0204 S22: 0.2318 S23: -0.2714 REMARK 3 S31: -0.2351 S32: 0.1006 S33: -0.0005 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN F AND RESID 11:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.986 -0.694 -20.266 REMARK 3 T TENSOR REMARK 3 T11: 0.2910 T22: 0.3011 REMARK 3 T33: 0.3331 T12: -0.0798 REMARK 3 T13: -0.0566 T23: -0.0744 REMARK 3 L TENSOR REMARK 3 L11: 6.1330 L22: 4.1068 REMARK 3 L33: 7.7485 L12: -0.3159 REMARK 3 L13: -4.5482 L23: -0.2842 REMARK 3 S TENSOR REMARK 3 S11: -0.1573 S12: 0.2350 S13: 0.2051 REMARK 3 S21: 0.0250 S22: 0.5041 S23: 0.2687 REMARK 3 S31: 0.2702 S32: 0.0104 S33: 0.0348 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN G AND RESID 11:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.984 -27.101 38.481 REMARK 3 T TENSOR REMARK 3 T11: 0.2695 T22: 0.7551 REMARK 3 T33: 0.2507 T12: -0.1178 REMARK 3 T13: -0.0512 T23: -0.1717 REMARK 3 L TENSOR REMARK 3 L11: 8.0251 L22: 6.0680 REMARK 3 L33: 4.7410 L12: -1.4927 REMARK 3 L13: -2.6349 L23: -1.1678 REMARK 3 S TENSOR REMARK 3 S11: -0.2665 S12: 0.9627 S13: -0.3948 REMARK 3 S21: 0.0980 S22: -0.2732 S23: 0.1482 REMARK 3 S31: 0.0129 S32: -0.5248 S33: -0.1093 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN H AND RESID 12:89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.061 -26.982 29.349 REMARK 3 T TENSOR REMARK 3 T11: 0.3448 T22: 0.7043 REMARK 3 T33: 0.2352 T12: 0.0282 REMARK 3 T13: -0.0024 T23: 0.1146 REMARK 3 L TENSOR REMARK 3 L11: 7.3072 L22: 4.1608 REMARK 3 L33: 5.1179 L12: 0.1766 REMARK 3 L13: -2.3258 L23: -1.0926 REMARK 3 S TENSOR REMARK 3 S11: -0.2213 S12: 0.4860 S13: -0.0289 REMARK 3 S21: 0.1196 S22: -0.1638 S23: -0.3798 REMARK 3 S31: 0.3299 S32: -0.3921 S33: -0.0006 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 101:164 ) OR ( CHAIN B AND RESID REMARK 3 101:145 ) OR ( CHAIN C AND RESID 101:129 ) OR ( REMARK 3 CHAIN D AND RESID 101:119 ) OR ( CHAIN E AND RESID REMARK 3 101:127 ) OR ( CHAIN F AND RESID 101:138 ) OR ( REMARK 3 CHAIN G AND RESID 101:135 ) OR ( CHAIN H AND RESID REMARK 3 101:133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.164 -7.619 9.695 REMARK 3 T TENSOR REMARK 3 T11: 0.3519 T22: 0.4165 REMARK 3 T33: 0.2989 T12: -0.0075 REMARK 3 T13: -0.0332 T23: -0.0537 REMARK 3 L TENSOR REMARK 3 L11: -0.0072 L22: 0.3465 REMARK 3 L33: -0.2772 L12: 0.0666 REMARK 3 L13: -0.1747 L23: -0.1873 REMARK 3 S TENSOR REMARK 3 S11: 0.0547 S12: -0.0680 S13: 0.0887 REMARK 3 S21: 0.0020 S22: -0.0216 S23: -0.0014 REMARK 3 S31: 0.0405 S32: -0.0478 S33: -1.1651 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8IWC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-23. REMARK 100 THE DEPOSITION ID IS D_1300036621. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL15A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : LN2-COOLED, FIXED-EXIT DOUBLE REMARK 200 CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : VERTICALLY COLLIMATING REMARK 200 PREMIRROR, LN2-COOLED FIXED-EXIT REMARK 200 DOUBLE CRYSTAL SI(111) REMARK 200 MONOCHROMATOR, TOROIDAL FOCUSING REMARK 200 MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23390 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.430 REMARK 200 RESOLUTION RANGE LOW (A) : 28.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.70400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, SODIUM POTASSIUM TARTRATE, PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.07200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 ASN A 3 REMARK 465 TYR A 4 REMARK 465 LYS A 5 REMARK 465 GLU A 6 REMARK 465 VAL A 7 REMARK 465 LYS A 8 REMARK 465 HIS A 9 REMARK 465 MET A 10 REMARK 465 MET B 1 REMARK 465 TYR B 2 REMARK 465 ASN B 3 REMARK 465 TYR B 4 REMARK 465 LYS B 5 REMARK 465 GLU B 6 REMARK 465 VAL B 7 REMARK 465 LYS B 8 REMARK 465 HIS B 9 REMARK 465 MET B 10 REMARK 465 MET C 1 REMARK 465 TYR C 2 REMARK 465 ASN C 3 REMARK 465 TYR C 4 REMARK 465 LYS C 5 REMARK 465 GLU C 6 REMARK 465 VAL C 7 REMARK 465 LYS C 8 REMARK 465 HIS C 9 REMARK 465 MET C 10 REMARK 465 MET D 1 REMARK 465 TYR D 2 REMARK 465 ASN D 3 REMARK 465 TYR D 4 REMARK 465 LYS D 5 REMARK 465 GLU D 6 REMARK 465 VAL D 7 REMARK 465 LYS D 8 REMARK 465 HIS D 9 REMARK 465 MET D 10 REMARK 465 GLY D 11 REMARK 465 MET E 1 REMARK 465 TYR E 2 REMARK 465 ASN E 3 REMARK 465 TYR E 4 REMARK 465 LYS E 5 REMARK 465 GLU E 6 REMARK 465 VAL E 7 REMARK 465 LYS E 8 REMARK 465 HIS E 9 REMARK 465 MET E 10 REMARK 465 GLY E 11 REMARK 465 MET F 1 REMARK 465 TYR F 2 REMARK 465 ASN F 3 REMARK 465 TYR F 4 REMARK 465 LYS F 5 REMARK 465 GLU F 6 REMARK 465 VAL F 7 REMARK 465 LYS F 8 REMARK 465 HIS F 9 REMARK 465 MET F 10 REMARK 465 MET G 1 REMARK 465 TYR G 2 REMARK 465 ASN G 3 REMARK 465 TYR G 4 REMARK 465 LYS G 5 REMARK 465 GLU G 6 REMARK 465 VAL G 7 REMARK 465 LYS G 8 REMARK 465 HIS G 9 REMARK 465 MET G 10 REMARK 465 MET H 1 REMARK 465 TYR H 2 REMARK 465 ASN H 3 REMARK 465 TYR H 4 REMARK 465 LYS H 5 REMARK 465 GLU H 6 REMARK 465 VAL H 7 REMARK 465 LYS H 8 REMARK 465 HIS H 9 REMARK 465 MET H 10 REMARK 465 GLY H 11 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE C 81 88.60 51.79 REMARK 500 PHE E 33 75.17 46.27 REMARK 500 PHE G 81 68.53 62.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 164 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH B 144 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 145 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH D 119 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH F 138 DISTANCE = 5.93 ANGSTROMS DBREF 8IWC A 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC B 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC C 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC D 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC E 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC F 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC G 1 89 UNP Q9PR55 Y08A_UREPA 1 89 DBREF 8IWC H 1 89 UNP Q9PR55 Y08A_UREPA 1 89 SEQRES 1 A 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 A 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 A 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 A 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 A 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 A 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 A 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 B 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 B 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 B 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 B 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 B 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 B 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 B 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 C 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 C 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 C 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 C 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 C 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 C 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 C 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 D 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 D 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 D 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 D 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 D 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 D 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 D 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 E 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 E 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 E 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 E 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 E 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 E 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 E 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 F 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 F 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 F 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 F 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 F 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 F 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 F 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 G 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 G 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 G 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 G 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 G 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 G 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 G 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP SEQRES 1 H 89 MET TYR ASN TYR LYS GLU VAL LYS HIS MET GLY TYR GLY SEQRES 2 H 89 LYS GLY TYR LEU ALA MET PHE LYS ASN LYS LYS VAL ARG SEQRES 3 H 89 PHE LYS VAL VAL ASN SER PHE PRO ASP LEU LYS VAL GLN SEQRES 4 H 89 PHE VAL THR SER PHE PRO ASP TYR LYS VAL LYS ILE SER SEQRES 5 H 89 ASN SER SER SER PHE CYS GLU GLU THR ILE LYS ILE GLN SEQRES 6 H 89 VAL VAL THR SER PHE PRO ASP VAL LYS LEU GLN LYS VAL SEQRES 7 H 89 THR SER PHE GLY ASP PHE GLU ALA TYR ILE ASP FORMUL 9 HOH *290(H2 O) HELIX 1 AA1 GLY A 15 LYS A 21 5 7 HELIX 2 AA2 GLY B 15 LYS B 21 5 7 HELIX 3 AA3 GLY C 13 LYS C 21 5 9 HELIX 4 AA4 GLY D 13 LYS D 21 5 9 HELIX 5 AA5 GLY E 15 LYS E 21 5 7 HELIX 6 AA6 GLY F 13 LYS F 21 5 9 HELIX 7 AA7 GLY G 15 LYS G 21 5 7 HELIX 8 AA8 GLY H 15 LYS H 21 5 7 SHEET 1 AA1 7 LYS A 24 VAL A 29 0 SHEET 2 AA1 7 THR A 61 VAL A 66 1 O ILE A 62 N ARG A 26 SHEET 3 AA1 7 LEU A 36 VAL A 41 1 N VAL A 38 O GLN A 65 SHEET 4 AA1 7 VAL A 73 VAL A 78 1 O LEU A 75 N VAL A 41 SHEET 5 AA1 7 TYR A 47 SER A 52 1 N VAL A 49 O VAL A 78 SHEET 6 AA1 7 PHE A 84 ASP A 89 1 O ALA A 86 N SER A 52 SHEET 7 AA1 7 LYS A 24 VAL A 29 1 N PHE A 27 O TYR A 87 SHEET 1 AA2 7 LYS B 24 VAL B 29 0 SHEET 2 AA2 7 THR B 61 VAL B 66 1 O ILE B 62 N ARG B 26 SHEET 3 AA2 7 LEU B 36 PHE B 40 1 N VAL B 38 O GLN B 65 SHEET 4 AA2 7 VAL B 73 VAL B 78 1 O LEU B 75 N GLN B 39 SHEET 5 AA2 7 TYR B 47 SER B 52 1 N VAL B 49 O GLN B 76 SHEET 6 AA2 7 PHE B 84 ASP B 89 1 O ALA B 86 N LYS B 50 SHEET 7 AA2 7 LYS B 24 VAL B 29 1 N VAL B 29 O ASP B 89 SHEET 1 AA3 7 LYS C 24 VAL C 29 0 SHEET 2 AA3 7 THR C 61 VAL C 66 1 O ILE C 62 N LYS C 28 SHEET 3 AA3 7 LEU C 36 PHE C 40 1 N VAL C 38 O GLN C 65 SHEET 4 AA3 7 VAL C 73 VAL C 78 1 O LEU C 75 N GLN C 39 SHEET 5 AA3 7 TYR C 47 SER C 52 1 N VAL C 49 O VAL C 78 SHEET 6 AA3 7 PHE C 84 ASP C 89 1 O ALA C 86 N LYS C 50 SHEET 7 AA3 7 LYS C 24 VAL C 29 1 N VAL C 25 O GLU C 85 SHEET 1 AA4 7 LYS D 24 VAL D 29 0 SHEET 2 AA4 7 THR D 61 VAL D 66 1 O ILE D 62 N ARG D 26 SHEET 3 AA4 7 LEU D 36 PHE D 40 1 N VAL D 38 O GLN D 65 SHEET 4 AA4 7 VAL D 73 VAL D 78 1 O LEU D 75 N GLN D 39 SHEET 5 AA4 7 TYR D 47 ILE D 51 1 N VAL D 49 O VAL D 78 SHEET 6 AA4 7 PHE D 84 ASP D 89 1 O ALA D 86 N LYS D 50 SHEET 7 AA4 7 LYS D 24 VAL D 29 1 N PHE D 27 O TYR D 87 SHEET 1 AA5 7 LYS E 24 VAL E 29 0 SHEET 2 AA5 7 THR E 61 VAL E 66 1 O ILE E 62 N ARG E 26 SHEET 3 AA5 7 LEU E 36 PHE E 40 1 N LEU E 36 O LYS E 63 SHEET 4 AA5 7 VAL E 73 VAL E 78 1 O LEU E 75 N GLN E 39 SHEET 5 AA5 7 TYR E 47 SER E 52 1 N VAL E 49 O VAL E 78 SHEET 6 AA5 7 PHE E 84 ILE E 88 1 O ALA E 86 N SER E 52 SHEET 7 AA5 7 LYS E 24 VAL E 29 1 N PHE E 27 O TYR E 87 SHEET 1 AA6 7 LYS F 24 VAL F 29 0 SHEET 2 AA6 7 THR F 61 VAL F 66 1 O ILE F 64 N LYS F 28 SHEET 3 AA6 7 LEU F 36 VAL F 41 1 N VAL F 38 O GLN F 65 SHEET 4 AA6 7 VAL F 73 VAL F 78 1 O LEU F 75 N GLN F 39 SHEET 5 AA6 7 TYR F 47 ILE F 51 1 N VAL F 49 O GLN F 76 SHEET 6 AA6 7 PHE F 84 ASP F 89 1 O ALA F 86 N LYS F 50 SHEET 7 AA6 7 LYS F 24 VAL F 29 1 N PHE F 27 O ASP F 89 SHEET 1 AA7 7 LYS G 24 VAL G 29 0 SHEET 2 AA7 7 CYS G 58 VAL G 66 1 O GLU G 59 N LYS G 24 SHEET 3 AA7 7 LEU G 36 PHE G 40 1 N VAL G 38 O GLN G 65 SHEET 4 AA7 7 VAL G 73 VAL G 78 1 O LEU G 75 N GLN G 39 SHEET 5 AA7 7 TYR G 47 ILE G 51 1 N VAL G 49 O GLN G 76 SHEET 6 AA7 7 PHE G 84 ASP G 89 1 O ALA G 86 N LYS G 50 SHEET 7 AA7 7 LYS G 24 VAL G 29 1 N VAL G 29 O ASP G 89 SHEET 1 AA8 7 LYS H 24 VAL H 29 0 SHEET 2 AA8 7 THR H 61 VAL H 66 1 O ILE H 62 N ARG H 26 SHEET 3 AA8 7 LEU H 36 VAL H 41 1 N VAL H 38 O GLN H 65 SHEET 4 AA8 7 VAL H 73 LYS H 77 1 O LEU H 75 N VAL H 41 SHEET 5 AA8 7 TYR H 47 SER H 52 1 N VAL H 49 O GLN H 76 SHEET 6 AA8 7 PHE H 84 ASP H 89 1 O ALA H 86 N SER H 52 SHEET 7 AA8 7 LYS H 24 VAL H 29 1 N VAL H 29 O ASP H 89 CRYST1 74.433 54.144 77.184 90.00 92.06 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013435 0.000000 0.000484 0.00000 SCALE2 0.000000 0.018469 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012964 0.00000 MTRIX1 1 0.666313 -0.254037 -0.701065 34.92267 1 MTRIX2 1 0.294850 -0.773797 0.560626 -18.09704 1 MTRIX3 1 -0.684902 -0.580262 -0.440688 23.25771 1 MTRIX1 2 0.610709 0.332612 -0.718613 0.58622 1 MTRIX2 2 -0.383869 -0.669386 -0.636056 14.12174 1 MTRIX3 2 -0.692589 0.664298 -0.281120 44.70949 1 MTRIX1 3 0.827151 0.412931 -0.381194 -26.91350 1 MTRIX2 3 -0.444688 0.066178 -0.893237 19.98258 1 MTRIX3 3 -0.343619 0.908355 0.238365 1.78601 1 MTRIX1 4 0.715377 -0.538232 -0.445581 -25.14208 1 MTRIX2 4 0.458481 -0.119647 0.880613 -23.82913 1 MTRIX3 4 -0.527287 -0.834261 0.161176 43.51092 1 MTRIX1 5 0.893427 -0.406205 -0.191793 -13.09305 1 MTRIX2 5 0.424395 0.623338 0.656764 -18.92807 1 MTRIX3 5 -0.147229 -0.668167 0.729298 -21.25123 1 MTRIX1 6 -0.955309 -0.270980 0.118132 51.25892 1 MTRIX2 6 -0.289718 0.778862 -0.556271 -12.69570 1 MTRIX3 6 0.058730 -0.565636 -0.822561 41.38210 1 MTRIX1 7 -0.582573 -0.054991 0.810916 52.64477 1 MTRIX2 7 -0.177468 -0.965029 -0.192937 -22.11041 1 MTRIX3 7 0.793167 -0.256312 0.552440 -2.50361 1