data_8IX3 # _entry.id 8IX3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8IX3 pdb_00008ix3 10.2210/pdb8ix3/pdb WWPDB D_1300036561 ? ? EMDB EMD-35788 ? ? # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of SARS-CoV-2 BA.4/5 spike protein in complex with 1G11 (local refinement)' _pdbx_database_related.db_id EMD-35788 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8IX3 _pdbx_database_status.recvd_initial_deposition_date 2023-03-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sun, H.' 1 ? 'Jiang, Y.' 2 ? 'Zheng, Z.' 3 ? 'Zheng, Q.' 4 ? 'Li, S.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Virol. _citation.journal_id_ASTM JOVIAM _citation.journal_id_CSD 0825 _citation.journal_id_ISSN 1098-5514 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 97 _citation.language ? _citation.page_first e0113723 _citation.page_last e0113723 _citation.title 'Structural basis for broad neutralization of human antibody against Omicron sublineages and evasion by XBB variant.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1128/jvi.01137-23 _citation.pdbx_database_id_PubMed 37855619 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sun, H.' 1 0009-0006-9866-9846 primary 'Wang, Y.' 2 ? primary 'Chen, X.' 3 ? primary 'Jiang, Y.' 4 ? primary 'Wang, S.' 5 ? primary 'Huang, Y.' 6 ? primary 'Liu, L.' 7 ? primary 'Li, Y.' 8 ? primary 'Lan, M.' 9 ? primary 'Guo, H.' 10 ? primary 'Yuan, Q.' 11 ? primary 'Zhang, Y.' 12 ? primary 'Li, T.' 13 ? primary 'Yu, H.' 14 ? primary 'Gu, Y.' 15 0000-0002-2870-2800 primary 'Zhang, J.' 16 ? primary 'Li, S.' 17 0000-0002-3374-1038 primary 'Zheng, Z.' 18 0000-0003-0099-4212 primary 'Zheng, Q.' 19 0000-0002-7516-9965 primary 'Xia, N.' 20 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8IX3 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8IX3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'light chain of 1G11' 11628.971 1 ? ? ? ? 2 polymer man 'heavy chain of 1G11' 13772.198 1 ? ? ? ? 3 polymer man 'BA.4/5 variant spike protein' 23949.986 1 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name ;Spike protein S2' ; # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DIQLTQSPSFLSASVGDRVTITCRASQGIDKYLAWYQQKPGQAPKVLIYAASTLHSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQLYTFPVTFGPGTKVDVR ; ;DIQLTQSPSFLSASVGDRVTITCRASQGIDKYLAWYQQKPGQAPKVLIYAASTLHSGVPSRFSGSGSGTDFTLTISSLQP EDFATYYCQQLYTFPVTFGPGTKVDVR ; L ? 2 'polypeptide(L)' no no ;EVQLVESGGGLVQPGRSLRLSCAASGFKFDDYAMHWVRQAPGKGLEWVSGTSWNSGTTGYADSVRGRFTISRDNAKKSLY LQMNSLGVEDTAFYYCVKDSNYDSSGYLINNFDYWGQGILVTVSS ; ;EVQLVESGGGLVQPGRSLRLSCAASGFKFDDYAMHWVRQAPGKGLEWVSGTSWNSGTTGYADSVRGRFTISRDNAKKSLY LQMNSLGVEDTAFYYCVKDSNYDSSGYLINNFDYWGQGILVTVSS ; H ? 3 'polypeptide(L)' no no ;TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAP GQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPL QSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGKKFNFNGLTGTGVLTESNK ; ;TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAP GQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPL QSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGKKFNFNGLTGTGVLTESNK ; G ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ILE n 1 3 GLN n 1 4 LEU n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 SER n 1 10 PHE n 1 11 LEU n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 VAL n 1 16 GLY n 1 17 ASP n 1 18 ARG n 1 19 VAL n 1 20 THR n 1 21 ILE n 1 22 THR n 1 23 CYS n 1 24 ARG n 1 25 ALA n 1 26 SER n 1 27 GLN n 1 28 GLY n 1 29 ILE n 1 30 ASP n 1 31 LYS n 1 32 TYR n 1 33 LEU n 1 34 ALA n 1 35 TRP n 1 36 TYR n 1 37 GLN n 1 38 GLN n 1 39 LYS n 1 40 PRO n 1 41 GLY n 1 42 GLN n 1 43 ALA n 1 44 PRO n 1 45 LYS n 1 46 VAL n 1 47 LEU n 1 48 ILE n 1 49 TYR n 1 50 ALA n 1 51 ALA n 1 52 SER n 1 53 THR n 1 54 LEU n 1 55 HIS n 1 56 SER n 1 57 GLY n 1 58 VAL n 1 59 PRO n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 GLY n 1 65 SER n 1 66 GLY n 1 67 SER n 1 68 GLY n 1 69 THR n 1 70 ASP n 1 71 PHE n 1 72 THR n 1 73 LEU n 1 74 THR n 1 75 ILE n 1 76 SER n 1 77 SER n 1 78 LEU n 1 79 GLN n 1 80 PRO n 1 81 GLU n 1 82 ASP n 1 83 PHE n 1 84 ALA n 1 85 THR n 1 86 TYR n 1 87 TYR n 1 88 CYS n 1 89 GLN n 1 90 GLN n 1 91 LEU n 1 92 TYR n 1 93 THR n 1 94 PHE n 1 95 PRO n 1 96 VAL n 1 97 THR n 1 98 PHE n 1 99 GLY n 1 100 PRO n 1 101 GLY n 1 102 THR n 1 103 LYS n 1 104 VAL n 1 105 ASP n 1 106 VAL n 1 107 ARG n 2 1 GLU n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 LEU n 2 12 VAL n 2 13 GLN n 2 14 PRO n 2 15 GLY n 2 16 ARG n 2 17 SER n 2 18 LEU n 2 19 ARG n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 LYS n 2 29 PHE n 2 30 ASP n 2 31 ASP n 2 32 TYR n 2 33 ALA n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 LYS n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 SER n 2 50 GLY n 2 51 THR n 2 52 SER n 2 53 TRP n 2 54 ASN n 2 55 SER n 2 56 GLY n 2 57 THR n 2 58 THR n 2 59 GLY n 2 60 TYR n 2 61 ALA n 2 62 ASP n 2 63 SER n 2 64 VAL n 2 65 ARG n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 ASN n 2 75 ALA n 2 76 LYS n 2 77 LYS n 2 78 SER n 2 79 LEU n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 MET n 2 84 ASN n 2 85 SER n 2 86 LEU n 2 87 GLY n 2 88 VAL n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 PHE n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 VAL n 2 98 LYS n 2 99 ASP n 2 100 SER n 2 101 ASN n 2 102 TYR n 2 103 ASP n 2 104 SER n 2 105 SER n 2 106 GLY n 2 107 TYR n 2 108 LEU n 2 109 ILE n 2 110 ASN n 2 111 ASN n 2 112 PHE n 2 113 ASP n 2 114 TYR n 2 115 TRP n 2 116 GLY n 2 117 GLN n 2 118 GLY n 2 119 ILE n 2 120 LEU n 2 121 VAL n 2 122 THR n 2 123 VAL n 2 124 SER n 2 125 SER n 3 1 THR n 3 2 ASN n 3 3 LEU n 3 4 CYS n 3 5 PRO n 3 6 PHE n 3 7 ASP n 3 8 GLU n 3 9 VAL n 3 10 PHE n 3 11 ASN n 3 12 ALA n 3 13 THR n 3 14 ARG n 3 15 PHE n 3 16 ALA n 3 17 SER n 3 18 VAL n 3 19 TYR n 3 20 ALA n 3 21 TRP n 3 22 ASN n 3 23 ARG n 3 24 LYS n 3 25 ARG n 3 26 ILE n 3 27 SER n 3 28 ASN n 3 29 CYS n 3 30 VAL n 3 31 ALA n 3 32 ASP n 3 33 TYR n 3 34 SER n 3 35 VAL n 3 36 LEU n 3 37 TYR n 3 38 ASN n 3 39 PHE n 3 40 ALA n 3 41 PRO n 3 42 PHE n 3 43 PHE n 3 44 ALA n 3 45 PHE n 3 46 LYS n 3 47 CYS n 3 48 TYR n 3 49 GLY n 3 50 VAL n 3 51 SER n 3 52 PRO n 3 53 THR n 3 54 LYS n 3 55 LEU n 3 56 ASN n 3 57 ASP n 3 58 LEU n 3 59 CYS n 3 60 PHE n 3 61 THR n 3 62 ASN n 3 63 VAL n 3 64 TYR n 3 65 ALA n 3 66 ASP n 3 67 SER n 3 68 PHE n 3 69 VAL n 3 70 ILE n 3 71 ARG n 3 72 GLY n 3 73 ASN n 3 74 GLU n 3 75 VAL n 3 76 SER n 3 77 GLN n 3 78 ILE n 3 79 ALA n 3 80 PRO n 3 81 GLY n 3 82 GLN n 3 83 THR n 3 84 GLY n 3 85 ASN n 3 86 ILE n 3 87 ALA n 3 88 ASP n 3 89 TYR n 3 90 ASN n 3 91 TYR n 3 92 LYS n 3 93 LEU n 3 94 PRO n 3 95 ASP n 3 96 ASP n 3 97 PHE n 3 98 THR n 3 99 GLY n 3 100 CYS n 3 101 VAL n 3 102 ILE n 3 103 ALA n 3 104 TRP n 3 105 ASN n 3 106 SER n 3 107 ASN n 3 108 LYS n 3 109 LEU n 3 110 ASP n 3 111 SER n 3 112 LYS n 3 113 VAL n 3 114 GLY n 3 115 GLY n 3 116 ASN n 3 117 TYR n 3 118 ASN n 3 119 TYR n 3 120 ARG n 3 121 TYR n 3 122 ARG n 3 123 LEU n 3 124 PHE n 3 125 ARG n 3 126 LYS n 3 127 SER n 3 128 ASN n 3 129 LEU n 3 130 LYS n 3 131 PRO n 3 132 PHE n 3 133 GLU n 3 134 ARG n 3 135 ASP n 3 136 ILE n 3 137 SER n 3 138 THR n 3 139 GLU n 3 140 ILE n 3 141 TYR n 3 142 GLN n 3 143 ALA n 3 144 GLY n 3 145 ASN n 3 146 LYS n 3 147 PRO n 3 148 CYS n 3 149 ASN n 3 150 GLY n 3 151 VAL n 3 152 ALA n 3 153 GLY n 3 154 VAL n 3 155 ASN n 3 156 CYS n 3 157 TYR n 3 158 PHE n 3 159 PRO n 3 160 LEU n 3 161 GLN n 3 162 SER n 3 163 TYR n 3 164 GLY n 3 165 PHE n 3 166 ARG n 3 167 PRO n 3 168 THR n 3 169 TYR n 3 170 GLY n 3 171 VAL n 3 172 GLY n 3 173 HIS n 3 174 GLN n 3 175 PRO n 3 176 TYR n 3 177 ARG n 3 178 VAL n 3 179 VAL n 3 180 VAL n 3 181 LEU n 3 182 SER n 3 183 PHE n 3 184 GLU n 3 185 LEU n 3 186 LEU n 3 187 HIS n 3 188 ALA n 3 189 PRO n 3 190 ALA n 3 191 THR n 3 192 VAL n 3 193 CYS n 3 194 GLY n 3 195 LYS n 3 196 LYS n 3 197 PHE n 3 198 ASN n 3 199 PHE n 3 200 ASN n 3 201 GLY n 3 202 LEU n 3 203 THR n 3 204 GLY n 3 205 THR n 3 206 GLY n 3 207 VAL n 3 208 LEU n 3 209 THR n 3 210 GLU n 3 211 SER n 3 212 ASN n 3 213 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Cricetulus griseus' 10029 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 125 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Cricetulus griseus' 10029 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 213 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK293 ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8IX3 8IX3 ? 1 ? 1 2 PDB 8IX3 8IX3 ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAP GQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPL QSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNK ; 333 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8IX3 L 1 ? 107 ? 8IX3 1 ? 107 ? 1 107 2 2 8IX3 H 1 ? 125 ? 8IX3 1 ? 125 ? 1 125 3 3 8IX3 G 1 ? 213 ? P0DTC2 333 ? 557 ? 333 545 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 8IX3 ASP G 7 ? UNP P0DTC2 GLY 339 variant 339 1 3 8IX3 PHE G 39 ? UNP P0DTC2 SER 371 variant 371 2 3 8IX3 PRO G 41 ? UNP P0DTC2 SER 373 variant 373 3 3 8IX3 PHE G 43 ? UNP P0DTC2 SER 375 variant 375 4 3 8IX3 ALA G 44 ? UNP P0DTC2 THR 376 variant 376 5 3 8IX3 ASN G 73 ? UNP P0DTC2 ASP 405 variant 405 6 3 8IX3 SER G 76 ? UNP P0DTC2 ARG 408 variant 408 7 3 8IX3 ASN G 85 ? UNP P0DTC2 LYS 417 variant 417 8 3 8IX3 LYS G 108 ? UNP P0DTC2 ASN 440 variant 440 9 3 8IX3 ARG G 120 ? UNP P0DTC2 LEU 452 variant 452 10 3 8IX3 ASN G 145 ? UNP P0DTC2 SER 477 variant 477 11 3 8IX3 LYS G 146 ? UNP P0DTC2 THR 478 variant 478 12 3 8IX3 ALA G 152 ? UNP P0DTC2 GLU 484 variant 484 13 3 8IX3 VAL G 154 ? UNP P0DTC2 PHE 486 variant 486 14 3 8IX3 ARG G 166 ? UNP P0DTC2 GLN 498 variant 498 15 3 8IX3 TYR G 169 ? UNP P0DTC2 ASN 501 variant 501 16 3 8IX3 HIS G 173 ? UNP P0DTC2 TYR 505 variant 505 17 3 8IX3 LYS G 195 ? UNP P0DTC2 PRO 527 variant 527 18 3 8IX3 ? G ? ? UNP P0DTC2 LYS 529 deletion ? 19 3 8IX3 ? G ? ? UNP P0DTC2 SER 530 deletion ? 20 3 8IX3 ? G ? ? UNP P0DTC2 THR 531 deletion ? 21 3 8IX3 ? G ? ? UNP P0DTC2 ASN 532 deletion ? 22 3 8IX3 ? G ? ? UNP P0DTC2 LEU 533 deletion ? 23 3 8IX3 ? G ? ? UNP P0DTC2 VAL 534 deletion ? 24 3 8IX3 ? G ? ? UNP P0DTC2 LYS 535 deletion ? 25 3 8IX3 ? G ? ? UNP P0DTC2 ASN 536 deletion ? 26 3 8IX3 ? G ? ? UNP P0DTC2 LYS 537 deletion ? 27 3 8IX3 ? G ? ? UNP P0DTC2 CYS 538 deletion ? 28 3 8IX3 ? G ? ? UNP P0DTC2 VAL 539 deletion ? 29 3 8IX3 ? G ? ? UNP P0DTC2 ASN 540 deletion ? 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8IX3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8IX3 _struct.title 'Cryo-EM structure of SARS-CoV-2 BA.4/5 spike protein in complex with 1G11 (local refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8IX3 _struct_keywords.text 'SARS-CoV-2, Neutralizing antibody, Cryo-EM, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY B 87 ? THR B 91 ? GLY H 87 THR H 91 5 ? 5 HELX_P HELX_P2 AA2 SER C 34 ? ASN C 38 ? SER G 366 ASN G 370 5 ? 5 HELX_P HELX_P3 AA3 GLU C 74 ? ILE C 78 ? GLU G 406 ILE G 410 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 88 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.027 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? C CYS 4 SG ? ? ? 1_555 C CYS 29 SG ? ? G CYS 336 G CYS 361 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf4 disulf ? ? C CYS 47 SG ? ? ? 1_555 C CYS 100 SG ? ? G CYS 379 G CYS 432 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? C CYS 148 SG ? ? ? 1_555 C CYS 156 SG ? ? G CYS 480 G CYS 488 1_555 ? ? ? ? ? ? ? 2.031 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 0.64 2 PHE 94 A . ? PHE 94 L PRO 95 A ? PRO 95 L 1 0.97 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 5 ? AA5 ? 5 ? AA6 ? 4 ? AA7 ? 4 ? AA8 ? 2 ? AA9 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 4 ? SER A 7 ? LEU L 4 SER L 7 AA1 2 VAL A 19 ? ALA A 25 ? VAL L 19 ALA L 25 AA1 3 ASP A 70 ? ILE A 75 ? ASP L 70 ILE L 75 AA1 4 PHE A 62 ? SER A 65 ? PHE L 62 SER L 65 AA2 1 PHE A 10 ? SER A 12 ? PHE L 10 SER L 12 AA2 2 THR A 102 ? ASP A 105 ? THR L 102 ASP L 105 AA2 3 THR A 85 ? GLN A 90 ? THR L 85 GLN L 90 AA2 4 LEU A 33 ? GLN A 38 ? LEU L 33 GLN L 38 AA2 5 LYS A 45 ? TYR A 49 ? LYS L 45 TYR L 49 AA2 6 THR A 53 ? LEU A 54 ? THR L 53 LEU L 54 AA3 1 GLN B 3 ? SER B 7 ? GLN H 3 SER H 7 AA3 2 SER B 17 ? SER B 25 ? SER H 17 SER H 25 AA3 3 SER B 78 ? ASN B 84 ? SER H 78 ASN H 84 AA3 4 PHE B 68 ? ASP B 73 ? PHE H 68 ASP H 73 AA4 1 GLY B 59 ? TYR B 60 ? GLY H 59 TYR H 60 AA4 2 LEU B 45 ? THR B 51 ? LEU H 45 THR H 51 AA4 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA4 4 ALA B 92 ? LYS B 98 ? ALA H 92 LYS H 98 AA4 5 TYR B 114 ? TRP B 115 ? TYR H 114 TRP H 115 AA5 1 GLY B 59 ? TYR B 60 ? GLY H 59 TYR H 60 AA5 2 LEU B 45 ? THR B 51 ? LEU H 45 THR H 51 AA5 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA5 4 ALA B 92 ? LYS B 98 ? ALA H 92 LYS H 98 AA5 5 ILE B 119 ? VAL B 121 ? ILE H 119 VAL H 121 AA6 1 ALA C 44 ? CYS C 47 ? ALA G 376 CYS G 379 AA6 2 CYS C 100 ? ASN C 105 ? CYS G 432 ASN G 437 AA6 3 TYR C 176 ? SER C 182 ? TYR G 508 SER G 514 AA6 4 TYR C 64 ? ALA C 65 ? TYR G 396 ALA G 397 AA7 1 ALA C 44 ? CYS C 47 ? ALA G 376 CYS G 379 AA7 2 CYS C 100 ? ASN C 105 ? CYS G 432 ASN G 437 AA7 3 TYR C 176 ? SER C 182 ? TYR G 508 SER G 514 AA7 4 PHE C 68 ? ILE C 70 ? PHE G 400 ILE G 402 AA8 1 ARG C 120 ? ARG C 122 ? ARG G 452 ARG G 454 AA8 2 LEU C 160 ? SER C 162 ? LEU G 492 SER G 494 AA9 1 TYR C 141 ? GLN C 142 ? TYR G 473 GLN G 474 AA9 2 CYS C 156 ? TYR C 157 ? CYS G 488 TYR G 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N SER A 7 ? N SER L 7 O THR A 22 ? O THR L 22 AA1 2 3 N CYS A 23 ? N CYS L 23 O PHE A 71 ? O PHE L 71 AA1 3 4 O THR A 74 ? O THR L 74 N SER A 63 ? N SER L 63 AA2 1 2 N LEU A 11 ? N LEU L 11 O ASP A 105 ? O ASP L 105 AA2 2 3 O THR A 102 ? O THR L 102 N TYR A 86 ? N TYR L 86 AA2 3 4 O TYR A 87 ? O TYR L 87 N TYR A 36 ? N TYR L 36 AA2 4 5 N TRP A 35 ? N TRP L 35 O ILE A 48 ? O ILE L 48 AA2 5 6 N TYR A 49 ? N TYR L 49 O THR A 53 ? O THR L 53 AA3 1 2 N VAL B 5 ? N VAL H 5 O ALA B 23 ? O ALA H 23 AA3 2 3 N LEU B 20 ? N LEU H 20 O LEU B 81 ? O LEU H 81 AA3 3 4 O GLN B 82 ? O GLN H 82 N THR B 69 ? N THR H 69 AA4 1 2 O GLY B 59 ? O GLY H 59 N GLY B 50 ? N GLY H 50 AA4 2 3 O THR B 51 ? O THR H 51 N MET B 34 ? N MET H 34 AA4 3 4 N VAL B 37 ? N VAL H 37 O TYR B 95 ? O TYR H 95 AA4 4 5 N LYS B 98 ? N LYS H 98 O TYR B 114 ? O TYR H 114 AA5 1 2 O GLY B 59 ? O GLY H 59 N GLY B 50 ? N GLY H 50 AA5 2 3 O THR B 51 ? O THR H 51 N MET B 34 ? N MET H 34 AA5 3 4 N VAL B 37 ? N VAL H 37 O TYR B 95 ? O TYR H 95 AA5 4 5 N TYR B 94 ? N TYR H 94 O ILE B 119 ? O ILE H 119 AA6 1 2 N LYS C 46 ? N LYS G 378 O VAL C 101 ? O VAL G 433 AA6 2 3 N ILE C 102 ? N ILE G 434 O VAL C 179 ? O VAL G 511 AA6 3 4 O SER C 182 ? O SER G 514 N TYR C 64 ? N TYR G 396 AA7 1 2 N LYS C 46 ? N LYS G 378 O VAL C 101 ? O VAL G 433 AA7 2 3 N ILE C 102 ? N ILE G 434 O VAL C 179 ? O VAL G 511 AA7 3 4 O TYR C 176 ? O TYR G 508 N ILE C 70 ? N ILE G 402 AA8 1 2 N TYR C 121 ? N TYR G 453 O GLN C 161 ? O GLN G 493 AA9 1 2 N TYR C 141 ? N TYR G 473 O TYR C 157 ? O TYR G 489 # _atom_sites.entry_id 8IX3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 GLN 3 3 3 GLN GLN L . n A 1 4 LEU 4 4 4 LEU LEU L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 SER 9 9 9 SER SER L . n A 1 10 PHE 10 10 10 PHE PHE L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 ALA 13 13 13 ALA ALA L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 VAL 15 15 15 VAL VAL L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 VAL 19 19 19 VAL VAL L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 ALA 25 25 25 ALA ALA L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 GLY 28 28 28 GLY GLY L . n A 1 29 ILE 29 29 29 ILE ILE L . n A 1 30 ASP 30 30 30 ASP ASP L . n A 1 31 LYS 31 31 31 LYS LYS L . n A 1 32 TYR 32 32 32 TYR TYR L . n A 1 33 LEU 33 33 33 LEU LEU L . n A 1 34 ALA 34 34 34 ALA ALA L . n A 1 35 TRP 35 35 35 TRP TRP L . n A 1 36 TYR 36 36 36 TYR TYR L . n A 1 37 GLN 37 37 37 GLN GLN L . n A 1 38 GLN 38 38 38 GLN GLN L . n A 1 39 LYS 39 39 39 LYS LYS L . n A 1 40 PRO 40 40 40 PRO PRO L . n A 1 41 GLY 41 41 41 GLY GLY L . n A 1 42 GLN 42 42 42 GLN GLN L . n A 1 43 ALA 43 43 43 ALA ALA L . n A 1 44 PRO 44 44 44 PRO PRO L . n A 1 45 LYS 45 45 45 LYS LYS L . n A 1 46 VAL 46 46 46 VAL VAL L . n A 1 47 LEU 47 47 47 LEU LEU L . n A 1 48 ILE 48 48 48 ILE ILE L . n A 1 49 TYR 49 49 49 TYR TYR L . n A 1 50 ALA 50 50 50 ALA ALA L . n A 1 51 ALA 51 51 51 ALA ALA L . n A 1 52 SER 52 52 52 SER SER L . n A 1 53 THR 53 53 53 THR THR L . n A 1 54 LEU 54 54 54 LEU LEU L . n A 1 55 HIS 55 55 55 HIS HIS L . n A 1 56 SER 56 56 56 SER SER L . n A 1 57 GLY 57 57 57 GLY GLY L . n A 1 58 VAL 58 58 58 VAL VAL L . n A 1 59 PRO 59 59 59 PRO PRO L . n A 1 60 SER 60 60 60 SER SER L . n A 1 61 ARG 61 61 61 ARG ARG L . n A 1 62 PHE 62 62 62 PHE PHE L . n A 1 63 SER 63 63 63 SER SER L . n A 1 64 GLY 64 64 64 GLY GLY L . n A 1 65 SER 65 65 65 SER SER L . n A 1 66 GLY 66 66 66 GLY GLY L . n A 1 67 SER 67 67 67 SER SER L . n A 1 68 GLY 68 68 68 GLY GLY L . n A 1 69 THR 69 69 69 THR THR L . n A 1 70 ASP 70 70 70 ASP ASP L . n A 1 71 PHE 71 71 71 PHE PHE L . n A 1 72 THR 72 72 72 THR THR L . n A 1 73 LEU 73 73 73 LEU LEU L . n A 1 74 THR 74 74 74 THR THR L . n A 1 75 ILE 75 75 75 ILE ILE L . n A 1 76 SER 76 76 76 SER SER L . n A 1 77 SER 77 77 77 SER SER L . n A 1 78 LEU 78 78 78 LEU LEU L . n A 1 79 GLN 79 79 79 GLN GLN L . n A 1 80 PRO 80 80 80 PRO PRO L . n A 1 81 GLU 81 81 81 GLU GLU L . n A 1 82 ASP 82 82 82 ASP ASP L . n A 1 83 PHE 83 83 83 PHE PHE L . n A 1 84 ALA 84 84 84 ALA ALA L . n A 1 85 THR 85 85 85 THR THR L . n A 1 86 TYR 86 86 86 TYR TYR L . n A 1 87 TYR 87 87 87 TYR TYR L . n A 1 88 CYS 88 88 88 CYS CYS L . n A 1 89 GLN 89 89 89 GLN GLN L . n A 1 90 GLN 90 90 90 GLN GLN L . n A 1 91 LEU 91 91 91 LEU LEU L . n A 1 92 TYR 92 92 92 TYR TYR L . n A 1 93 THR 93 93 93 THR THR L . n A 1 94 PHE 94 94 94 PHE PHE L . n A 1 95 PRO 95 95 95 PRO PRO L . n A 1 96 VAL 96 96 96 VAL VAL L . n A 1 97 THR 97 97 97 THR THR L . n A 1 98 PHE 98 98 98 PHE PHE L . n A 1 99 GLY 99 99 99 GLY GLY L . n A 1 100 PRO 100 100 100 PRO PRO L . n A 1 101 GLY 101 101 101 GLY GLY L . n A 1 102 THR 102 102 102 THR THR L . n A 1 103 LYS 103 103 103 LYS LYS L . n A 1 104 VAL 104 104 104 VAL VAL L . n A 1 105 ASP 105 105 105 ASP ASP L . n A 1 106 VAL 106 106 106 VAL VAL L . n A 1 107 ARG 107 107 107 ARG ARG L . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLU 6 6 6 GLU GLU H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 GLN 13 13 13 GLN GLN H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ARG 16 16 16 ARG ARG H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 ARG 19 19 19 ARG ARG H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 ALA 23 23 23 ALA ALA H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 PHE 27 27 27 PHE PHE H . n B 2 28 LYS 28 28 28 LYS LYS H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 ASP 30 30 30 ASP ASP H . n B 2 31 ASP 31 31 31 ASP ASP H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 ALA 33 33 33 ALA ALA H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 LYS 43 43 43 LYS LYS H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 VAL 48 48 48 VAL VAL H . n B 2 49 SER 49 49 49 SER SER H . n B 2 50 GLY 50 50 50 GLY GLY H . n B 2 51 THR 51 51 51 THR THR H . n B 2 52 SER 52 52 52 SER SER H . n B 2 53 TRP 53 53 53 TRP TRP H . n B 2 54 ASN 54 54 54 ASN ASN H . n B 2 55 SER 55 55 55 SER SER H . n B 2 56 GLY 56 56 56 GLY GLY H . n B 2 57 THR 57 57 57 THR THR H . n B 2 58 THR 58 58 58 THR THR H . n B 2 59 GLY 59 59 59 GLY GLY H . n B 2 60 TYR 60 60 60 TYR TYR H . n B 2 61 ALA 61 61 61 ALA ALA H . n B 2 62 ASP 62 62 62 ASP ASP H . n B 2 63 SER 63 63 63 SER SER H . n B 2 64 VAL 64 64 64 VAL VAL H . n B 2 65 ARG 65 65 65 ARG ARG H . n B 2 66 GLY 66 66 66 GLY GLY H . n B 2 67 ARG 67 67 67 ARG ARG H . n B 2 68 PHE 68 68 68 PHE PHE H . n B 2 69 THR 69 69 69 THR THR H . n B 2 70 ILE 70 70 70 ILE ILE H . n B 2 71 SER 71 71 71 SER SER H . n B 2 72 ARG 72 72 72 ARG ARG H . n B 2 73 ASP 73 73 73 ASP ASP H . n B 2 74 ASN 74 74 74 ASN ASN H . n B 2 75 ALA 75 75 75 ALA ALA H . n B 2 76 LYS 76 76 76 LYS LYS H . n B 2 77 LYS 77 77 77 LYS LYS H . n B 2 78 SER 78 78 78 SER SER H . n B 2 79 LEU 79 79 79 LEU LEU H . n B 2 80 TYR 80 80 80 TYR TYR H . n B 2 81 LEU 81 81 81 LEU LEU H . n B 2 82 GLN 82 82 82 GLN GLN H . n B 2 83 MET 83 83 83 MET MET H . n B 2 84 ASN 84 84 84 ASN ASN H . n B 2 85 SER 85 85 85 SER SER H . n B 2 86 LEU 86 86 86 LEU LEU H . n B 2 87 GLY 87 87 87 GLY GLY H . n B 2 88 VAL 88 88 88 VAL VAL H . n B 2 89 GLU 89 89 89 GLU GLU H . n B 2 90 ASP 90 90 90 ASP ASP H . n B 2 91 THR 91 91 91 THR THR H . n B 2 92 ALA 92 92 92 ALA ALA H . n B 2 93 PHE 93 93 93 PHE PHE H . n B 2 94 TYR 94 94 94 TYR TYR H . n B 2 95 TYR 95 95 95 TYR TYR H . n B 2 96 CYS 96 96 96 CYS CYS H . n B 2 97 VAL 97 97 97 VAL VAL H . n B 2 98 LYS 98 98 98 LYS LYS H . n B 2 99 ASP 99 99 99 ASP ASP H . n B 2 100 SER 100 100 100 SER SER H . n B 2 101 ASN 101 101 101 ASN ASN H . n B 2 102 TYR 102 102 102 TYR TYR H . n B 2 103 ASP 103 103 103 ASP ASP H . n B 2 104 SER 104 104 104 SER SER H . n B 2 105 SER 105 105 105 SER SER H . n B 2 106 GLY 106 106 106 GLY GLY H . n B 2 107 TYR 107 107 107 TYR TYR H . n B 2 108 LEU 108 108 108 LEU LEU H . n B 2 109 ILE 109 109 109 ILE ILE H . n B 2 110 ASN 110 110 110 ASN ASN H . n B 2 111 ASN 111 111 111 ASN ASN H . n B 2 112 PHE 112 112 112 PHE PHE H . n B 2 113 ASP 113 113 113 ASP ASP H . n B 2 114 TYR 114 114 114 TYR TYR H . n B 2 115 TRP 115 115 115 TRP TRP H . n B 2 116 GLY 116 116 116 GLY GLY H . n B 2 117 GLN 117 117 117 GLN GLN H . n B 2 118 GLY 118 118 118 GLY GLY H . n B 2 119 ILE 119 119 119 ILE ILE H . n B 2 120 LEU 120 120 120 LEU LEU H . n B 2 121 VAL 121 121 121 VAL VAL H . n B 2 122 THR 122 122 122 THR THR H . n B 2 123 VAL 123 123 123 VAL VAL H . n B 2 124 SER 124 124 124 SER SER H . n B 2 125 SER 125 125 125 SER SER H . n C 3 1 THR 1 333 333 THR THR G . n C 3 2 ASN 2 334 334 ASN ASN G . n C 3 3 LEU 3 335 335 LEU LEU G . n C 3 4 CYS 4 336 336 CYS CYS G . n C 3 5 PRO 5 337 337 PRO PRO G . n C 3 6 PHE 6 338 338 PHE PHE G . n C 3 7 ASP 7 339 339 ASP ASP G . n C 3 8 GLU 8 340 340 GLU GLU G . n C 3 9 VAL 9 341 341 VAL VAL G . n C 3 10 PHE 10 342 342 PHE PHE G . n C 3 11 ASN 11 343 343 ASN ASN G . n C 3 12 ALA 12 344 344 ALA ALA G . n C 3 13 THR 13 345 345 THR THR G . n C 3 14 ARG 14 346 346 ARG ARG G . n C 3 15 PHE 15 347 347 PHE PHE G . n C 3 16 ALA 16 348 348 ALA ALA G . n C 3 17 SER 17 349 349 SER SER G . n C 3 18 VAL 18 350 350 VAL VAL G . n C 3 19 TYR 19 351 351 TYR TYR G . n C 3 20 ALA 20 352 352 ALA ALA G . n C 3 21 TRP 21 353 353 TRP TRP G . n C 3 22 ASN 22 354 354 ASN ASN G . n C 3 23 ARG 23 355 355 ARG ARG G . n C 3 24 LYS 24 356 356 LYS LYS G . n C 3 25 ARG 25 357 357 ARG ARG G . n C 3 26 ILE 26 358 358 ILE ILE G . n C 3 27 SER 27 359 359 SER SER G . n C 3 28 ASN 28 360 360 ASN ASN G . n C 3 29 CYS 29 361 361 CYS CYS G . n C 3 30 VAL 30 362 362 VAL VAL G . n C 3 31 ALA 31 363 363 ALA ALA G . n C 3 32 ASP 32 364 364 ASP ASP G . n C 3 33 TYR 33 365 365 TYR TYR G . n C 3 34 SER 34 366 366 SER SER G . n C 3 35 VAL 35 367 367 VAL VAL G . n C 3 36 LEU 36 368 368 LEU LEU G . n C 3 37 TYR 37 369 369 TYR TYR G . n C 3 38 ASN 38 370 370 ASN ASN G . n C 3 39 PHE 39 371 371 PHE PHE G . n C 3 40 ALA 40 372 372 ALA ALA G . n C 3 41 PRO 41 373 373 PRO PRO G . n C 3 42 PHE 42 374 374 PHE PHE G . n C 3 43 PHE 43 375 375 PHE PHE G . n C 3 44 ALA 44 376 376 ALA ALA G . n C 3 45 PHE 45 377 377 PHE PHE G . n C 3 46 LYS 46 378 378 LYS LYS G . n C 3 47 CYS 47 379 379 CYS CYS G . n C 3 48 TYR 48 380 380 TYR TYR G . n C 3 49 GLY 49 381 381 GLY GLY G . n C 3 50 VAL 50 382 382 VAL VAL G . n C 3 51 SER 51 383 383 SER SER G . n C 3 52 PRO 52 384 384 PRO PRO G . n C 3 53 THR 53 385 385 THR THR G . n C 3 54 LYS 54 386 386 LYS LYS G . n C 3 55 LEU 55 387 387 LEU LEU G . n C 3 56 ASN 56 388 388 ASN ASN G . n C 3 57 ASP 57 389 389 ASP ASP G . n C 3 58 LEU 58 390 390 LEU LEU G . n C 3 59 CYS 59 391 391 CYS CYS G . n C 3 60 PHE 60 392 392 PHE PHE G . n C 3 61 THR 61 393 393 THR THR G . n C 3 62 ASN 62 394 394 ASN ASN G . n C 3 63 VAL 63 395 395 VAL VAL G . n C 3 64 TYR 64 396 396 TYR TYR G . n C 3 65 ALA 65 397 397 ALA ALA G . n C 3 66 ASP 66 398 398 ASP ASP G . n C 3 67 SER 67 399 399 SER SER G . n C 3 68 PHE 68 400 400 PHE PHE G . n C 3 69 VAL 69 401 401 VAL VAL G . n C 3 70 ILE 70 402 402 ILE ILE G . n C 3 71 ARG 71 403 403 ARG ARG G . n C 3 72 GLY 72 404 404 GLY GLY G . n C 3 73 ASN 73 405 405 ASN ASN G . n C 3 74 GLU 74 406 406 GLU GLU G . n C 3 75 VAL 75 407 407 VAL VAL G . n C 3 76 SER 76 408 408 SER SER G . n C 3 77 GLN 77 409 409 GLN GLN G . n C 3 78 ILE 78 410 410 ILE ILE G . n C 3 79 ALA 79 411 411 ALA ALA G . n C 3 80 PRO 80 412 412 PRO PRO G . n C 3 81 GLY 81 413 413 GLY GLY G . n C 3 82 GLN 82 414 414 GLN GLN G . n C 3 83 THR 83 415 415 THR THR G . n C 3 84 GLY 84 416 416 GLY GLY G . n C 3 85 ASN 85 417 417 ASN ASN G . n C 3 86 ILE 86 418 418 ILE ILE G . n C 3 87 ALA 87 419 419 ALA ALA G . n C 3 88 ASP 88 420 420 ASP ASP G . n C 3 89 TYR 89 421 421 TYR TYR G . n C 3 90 ASN 90 422 422 ASN ASN G . n C 3 91 TYR 91 423 423 TYR TYR G . n C 3 92 LYS 92 424 424 LYS LYS G . n C 3 93 LEU 93 425 425 LEU LEU G . n C 3 94 PRO 94 426 426 PRO PRO G . n C 3 95 ASP 95 427 427 ASP ASP G . n C 3 96 ASP 96 428 428 ASP ASP G . n C 3 97 PHE 97 429 429 PHE PHE G . n C 3 98 THR 98 430 430 THR THR G . n C 3 99 GLY 99 431 431 GLY GLY G . n C 3 100 CYS 100 432 432 CYS CYS G . n C 3 101 VAL 101 433 433 VAL VAL G . n C 3 102 ILE 102 434 434 ILE ILE G . n C 3 103 ALA 103 435 435 ALA ALA G . n C 3 104 TRP 104 436 436 TRP TRP G . n C 3 105 ASN 105 437 437 ASN ASN G . n C 3 106 SER 106 438 438 SER SER G . n C 3 107 ASN 107 439 439 ASN ASN G . n C 3 108 LYS 108 440 440 LYS LYS G . n C 3 109 LEU 109 441 441 LEU LEU G . n C 3 110 ASP 110 442 442 ASP ASP G . n C 3 111 SER 111 443 443 SER SER G . n C 3 112 LYS 112 444 444 LYS LYS G . n C 3 113 VAL 113 445 445 VAL VAL G . n C 3 114 GLY 114 446 446 GLY GLY G . n C 3 115 GLY 115 447 447 GLY GLY G . n C 3 116 ASN 116 448 448 ASN ASN G . n C 3 117 TYR 117 449 449 TYR TYR G . n C 3 118 ASN 118 450 450 ASN ASN G . n C 3 119 TYR 119 451 451 TYR TYR G . n C 3 120 ARG 120 452 452 ARG ARG G . n C 3 121 TYR 121 453 453 TYR TYR G . n C 3 122 ARG 122 454 454 ARG ARG G . n C 3 123 LEU 123 455 455 LEU LEU G . n C 3 124 PHE 124 456 456 PHE PHE G . n C 3 125 ARG 125 457 457 ARG ARG G . n C 3 126 LYS 126 458 458 LYS LYS G . n C 3 127 SER 127 459 459 SER SER G . n C 3 128 ASN 128 460 460 ASN ASN G . n C 3 129 LEU 129 461 461 LEU LEU G . n C 3 130 LYS 130 462 462 LYS LYS G . n C 3 131 PRO 131 463 463 PRO PRO G . n C 3 132 PHE 132 464 464 PHE PHE G . n C 3 133 GLU 133 465 465 GLU GLU G . n C 3 134 ARG 134 466 466 ARG ARG G . n C 3 135 ASP 135 467 467 ASP ASP G . n C 3 136 ILE 136 468 468 ILE ILE G . n C 3 137 SER 137 469 469 SER SER G . n C 3 138 THR 138 470 470 THR THR G . n C 3 139 GLU 139 471 471 GLU GLU G . n C 3 140 ILE 140 472 472 ILE ILE G . n C 3 141 TYR 141 473 473 TYR TYR G . n C 3 142 GLN 142 474 474 GLN GLN G . n C 3 143 ALA 143 475 475 ALA ALA G . n C 3 144 GLY 144 476 476 GLY GLY G . n C 3 145 ASN 145 477 477 ASN ASN G . n C 3 146 LYS 146 478 478 LYS LYS G . n C 3 147 PRO 147 479 479 PRO PRO G . n C 3 148 CYS 148 480 480 CYS CYS G . n C 3 149 ASN 149 481 481 ASN ASN G . n C 3 150 GLY 150 482 482 GLY GLY G . n C 3 151 VAL 151 483 483 VAL VAL G . n C 3 152 ALA 152 484 484 ALA ALA G . n C 3 153 GLY 153 485 485 GLY GLY G . n C 3 154 VAL 154 486 486 VAL VAL G . n C 3 155 ASN 155 487 487 ASN ASN G . n C 3 156 CYS 156 488 488 CYS CYS G . n C 3 157 TYR 157 489 489 TYR TYR G . n C 3 158 PHE 158 490 490 PHE PHE G . n C 3 159 PRO 159 491 491 PRO PRO G . n C 3 160 LEU 160 492 492 LEU LEU G . n C 3 161 GLN 161 493 493 GLN GLN G . n C 3 162 SER 162 494 494 SER SER G . n C 3 163 TYR 163 495 495 TYR TYR G . n C 3 164 GLY 164 496 496 GLY GLY G . n C 3 165 PHE 165 497 497 PHE PHE G . n C 3 166 ARG 166 498 498 ARG ARG G . n C 3 167 PRO 167 499 499 PRO PRO G . n C 3 168 THR 168 500 500 THR THR G . n C 3 169 TYR 169 501 501 TYR TYR G . n C 3 170 GLY 170 502 502 GLY GLY G . n C 3 171 VAL 171 503 503 VAL VAL G . n C 3 172 GLY 172 504 504 GLY GLY G . n C 3 173 HIS 173 505 505 HIS HIS G . n C 3 174 GLN 174 506 506 GLN GLN G . n C 3 175 PRO 175 507 507 PRO PRO G . n C 3 176 TYR 176 508 508 TYR TYR G . n C 3 177 ARG 177 509 509 ARG ARG G . n C 3 178 VAL 178 510 510 VAL VAL G . n C 3 179 VAL 179 511 511 VAL VAL G . n C 3 180 VAL 180 512 512 VAL VAL G . n C 3 181 LEU 181 513 513 LEU LEU G . n C 3 182 SER 182 514 514 SER SER G . n C 3 183 PHE 183 515 515 PHE PHE G . n C 3 184 GLU 184 516 516 GLU GLU G . n C 3 185 LEU 185 517 517 LEU LEU G . n C 3 186 LEU 186 518 518 LEU LEU G . n C 3 187 HIS 187 519 519 HIS HIS G . n C 3 188 ALA 188 520 520 ALA ALA G . n C 3 189 PRO 189 521 521 PRO PRO G . n C 3 190 ALA 190 522 522 ALA ALA G . n C 3 191 THR 191 523 523 THR THR G . n C 3 192 VAL 192 524 524 VAL VAL G . n C 3 193 CYS 193 525 525 CYS CYS G . n C 3 194 GLY 194 526 526 GLY GLY G . n C 3 195 LYS 195 527 ? ? ? G . n C 3 196 LYS 196 528 ? ? ? G . n C 3 197 PHE 197 529 ? ? ? G . n C 3 198 ASN 198 530 ? ? ? G . n C 3 199 PHE 199 531 ? ? ? G . n C 3 200 ASN 200 532 ? ? ? G . n C 3 201 GLY 201 533 ? ? ? G . n C 3 202 LEU 202 534 ? ? ? G . n C 3 203 THR 203 535 ? ? ? G . n C 3 204 GLY 204 536 ? ? ? G . n C 3 205 THR 205 537 ? ? ? G . n C 3 206 GLY 206 538 ? ? ? G . n C 3 207 VAL 207 539 ? ? ? G . n C 3 208 LEU 208 540 ? ? ? G . n C 3 209 THR 209 541 ? ? ? G . n C 3 210 GLU 210 542 ? ? ? G . n C 3 211 SER 211 543 ? ? ? G . n C 3 212 ASN 212 544 ? ? ? G . n C 3 213 LYS 213 545 ? ? ? G . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email abing0811@xmu.edu.cn _pdbx_contact_author.name_first Qingbing _pdbx_contact_author.name_last Zheng _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7516-9965 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-11-15 2 'Structure model' 1 1 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation.journal_volume' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8IX3 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8IX3 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.98 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 275583 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'SARS-CoV-2 BA.4/5 spike protein in complex with 1G11' ? ? ? '1, 2, 3' 2 1 RECOMBINANT COMPLEX 'SARS-CoV-2 BA.4/5 spike protein' ? ? ? 3 3 1 RECOMBINANT COMPLEX 'nAb 1G11' ? ? ? '1, 2' # _em_imaging.entry_id 8IX3 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TECNAI F30' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8IX3 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8IX3 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP L 30 ? ? 60.35 61.97 2 1 LYS L 31 ? ? 72.96 -7.92 3 1 ALA L 51 ? ? 66.91 -3.82 4 1 LEU L 91 ? ? -140.73 34.62 5 1 VAL H 48 ? ? -92.54 -61.48 6 1 SER H 104 ? ? -163.33 -165.87 7 1 SER H 124 ? ? -130.60 -39.00 8 1 TYR G 365 ? ? -94.99 31.57 9 1 GLU G 516 ? ? -102.41 76.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 G LYS 527 ? C LYS 195 2 1 Y 1 G LYS 528 ? C LYS 196 3 1 Y 1 G PHE 529 ? C PHE 197 4 1 Y 1 G ASN 530 ? C ASN 198 5 1 Y 1 G PHE 531 ? C PHE 199 6 1 Y 1 G ASN 532 ? C ASN 200 7 1 Y 1 G GLY 533 ? C GLY 201 8 1 Y 1 G LEU 534 ? C LEU 202 9 1 Y 1 G THR 535 ? C THR 203 10 1 Y 1 G GLY 536 ? C GLY 204 11 1 Y 1 G THR 537 ? C THR 205 12 1 Y 1 G GLY 538 ? C GLY 206 13 1 Y 1 G VAL 539 ? C VAL 207 14 1 Y 1 G LEU 540 ? C LEU 208 15 1 Y 1 G THR 541 ? C THR 209 16 1 Y 1 G GLU 542 ? C GLU 210 17 1 Y 1 G SER 543 ? C SER 211 18 1 Y 1 G ASN 544 ? C ASN 212 19 1 Y 1 G LYS 545 ? C LYS 213 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue ? ? 2 1 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? 3 2 9606 'Homo sapiens' ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 9606 'Homo sapiens' ? ? ? 3 3 10029 'Cricetulus griseus' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #