data_8J25 # _entry.id 8J25 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8J25 pdb_00008j25 10.2210/pdb8j25/pdb WWPDB D_1300036734 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8J25 _pdbx_database_status.recvd_initial_deposition_date 2023-04-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Zhou, C.' 1 ? 'Zang, N.' 2 ? 'Zhang, J.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cancer Discov' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2159-8290 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 2548 _citation.page_last 2565 _citation.title ;Structural Basis of PML-RARA Oncoprotein Targeting by Arsenic Unravels a Cysteine Rheostat Controlling PML Body Assembly and Function. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1158/2159-8290.CD-23-0453 _citation.pdbx_database_id_PubMed 37655965 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bercier, P.' 1 0000-0003-0743-8155 primary 'Wang, Q.Q.' 2 0000-0001-5084-3450 primary 'Zang, N.' 3 0000-0001-8831-6015 primary 'Zhang, J.' 4 0009-0006-8006-1058 primary 'Yang, C.' 5 0009-0007-8717-1521 primary 'Maimaitiyiming, Y.' 6 0000-0002-1990-4857 primary 'Abou-Ghali, M.' 7 0009-0004-1427-1220 primary 'Berthier, C.' 8 0009-0002-9494-1831 primary 'Wu, C.' 9 0000-0002-4070-6548 primary 'Niwa-Kawakita, M.' 10 0000-0002-9450-583X primary 'Dirami, T.' 11 0009-0008-5280-4760 primary 'Geoffroy, M.C.' 12 0000-0001-8298-467X primary 'Ferhi, O.' 13 0000-0002-2520-0194 primary 'Quentin, S.' 14 0009-0003-0762-7690 primary 'Benhenda, S.' 15 0009-0004-6126-5501 primary 'Ogra, Y.' 16 0000-0002-8268-1828 primary 'Gueroui, Z.' 17 0000-0003-1819-5427 primary 'Zhou, C.' 18 0000-0002-9257-468X primary 'Naranmandura, H.' 19 0000-0003-0799-2340 primary 'de The, H.' 20 0000-0002-1113-4472 primary 'Lallemand-Breitenbach, V.' 21 0000-0001-9852-204X # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 8J25 _cell.details ? _cell.formula_units_Z ? _cell.length_a 121.568 _cell.length_a_esd ? _cell.length_b 121.568 _cell.length_b_esd ? _cell.length_c 161.332 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8J25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Maltose/maltodextrin-binding periplasmic protein,Protein PML' 47019.188 1 2.3.2.- C213A,A216V ? ? 2 branched nat 'alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 3 non-polymer nat 'ZINC ION' 65.409 2 ? ? ? ? 4 water nat water 18.015 42 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;MMBP,Maltodextrin-binding protein,Maltose-binding protein,MBP,E3 SUMO-protein ligase PML,Promyelocytic leukemia protein,RING finger protein 71,RING-type E3 SUMO transferase PML,Tripartite motif-containing protein 19,TRIM19 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAE ITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTW PLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS KVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIA ATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNAAAEFKTNNIFCSNPNHRTPTLTSIYCRGCS KPLCASCVLLDSSHSELKCDISAEIQQR ; _entity_poly.pdbx_seq_one_letter_code_can ;MGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAE ITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTW PLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS KVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIA ATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNAAAEFKTNNIFCSNPNHRTPTLTSIYCRGCS KPLCASCVLLDSSHSELKCDISAEIQQR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 LYS n 1 4 ILE n 1 5 GLU n 1 6 GLU n 1 7 GLY n 1 8 LYS n 1 9 LEU n 1 10 VAL n 1 11 ILE n 1 12 TRP n 1 13 ILE n 1 14 ASN n 1 15 GLY n 1 16 ASP n 1 17 LYS n 1 18 GLY n 1 19 TYR n 1 20 ASN n 1 21 GLY n 1 22 LEU n 1 23 ALA n 1 24 GLU n 1 25 VAL n 1 26 GLY n 1 27 LYS n 1 28 LYS n 1 29 PHE n 1 30 GLU n 1 31 LYS n 1 32 ASP n 1 33 THR n 1 34 GLY n 1 35 ILE n 1 36 LYS n 1 37 VAL n 1 38 THR n 1 39 VAL n 1 40 GLU n 1 41 HIS n 1 42 PRO n 1 43 ASP n 1 44 LYS n 1 45 LEU n 1 46 GLU n 1 47 GLU n 1 48 LYS n 1 49 PHE n 1 50 PRO n 1 51 GLN n 1 52 VAL n 1 53 ALA n 1 54 ALA n 1 55 THR n 1 56 GLY n 1 57 ASP n 1 58 GLY n 1 59 PRO n 1 60 ASP n 1 61 ILE n 1 62 ILE n 1 63 PHE n 1 64 TRP n 1 65 ALA n 1 66 HIS n 1 67 ASP n 1 68 ARG n 1 69 PHE n 1 70 GLY n 1 71 GLY n 1 72 TYR n 1 73 ALA n 1 74 GLN n 1 75 SER n 1 76 GLY n 1 77 LEU n 1 78 LEU n 1 79 ALA n 1 80 GLU n 1 81 ILE n 1 82 THR n 1 83 PRO n 1 84 ASP n 1 85 LYS n 1 86 ALA n 1 87 PHE n 1 88 GLN n 1 89 ASP n 1 90 LYS n 1 91 LEU n 1 92 TYR n 1 93 PRO n 1 94 PHE n 1 95 THR n 1 96 TRP n 1 97 ASP n 1 98 ALA n 1 99 VAL n 1 100 ARG n 1 101 TYR n 1 102 ASN n 1 103 GLY n 1 104 LYS n 1 105 LEU n 1 106 ILE n 1 107 ALA n 1 108 TYR n 1 109 PRO n 1 110 ILE n 1 111 ALA n 1 112 VAL n 1 113 GLU n 1 114 ALA n 1 115 LEU n 1 116 SER n 1 117 LEU n 1 118 ILE n 1 119 TYR n 1 120 ASN n 1 121 LYS n 1 122 ASP n 1 123 LEU n 1 124 LEU n 1 125 PRO n 1 126 ASN n 1 127 PRO n 1 128 PRO n 1 129 LYS n 1 130 THR n 1 131 TRP n 1 132 GLU n 1 133 GLU n 1 134 ILE n 1 135 PRO n 1 136 ALA n 1 137 LEU n 1 138 ASP n 1 139 LYS n 1 140 GLU n 1 141 LEU n 1 142 LYS n 1 143 ALA n 1 144 LYS n 1 145 GLY n 1 146 LYS n 1 147 SER n 1 148 ALA n 1 149 LEU n 1 150 MET n 1 151 PHE n 1 152 ASN n 1 153 LEU n 1 154 GLN n 1 155 GLU n 1 156 PRO n 1 157 TYR n 1 158 PHE n 1 159 THR n 1 160 TRP n 1 161 PRO n 1 162 LEU n 1 163 ILE n 1 164 ALA n 1 165 ALA n 1 166 ASP n 1 167 GLY n 1 168 GLY n 1 169 TYR n 1 170 ALA n 1 171 PHE n 1 172 LYS n 1 173 TYR n 1 174 GLU n 1 175 ASN n 1 176 GLY n 1 177 LYS n 1 178 TYR n 1 179 ASP n 1 180 ILE n 1 181 LYS n 1 182 ASP n 1 183 VAL n 1 184 GLY n 1 185 VAL n 1 186 ASP n 1 187 ASN n 1 188 ALA n 1 189 GLY n 1 190 ALA n 1 191 LYS n 1 192 ALA n 1 193 GLY n 1 194 LEU n 1 195 THR n 1 196 PHE n 1 197 LEU n 1 198 VAL n 1 199 ASP n 1 200 LEU n 1 201 ILE n 1 202 LYS n 1 203 ASN n 1 204 LYS n 1 205 HIS n 1 206 MET n 1 207 ASN n 1 208 ALA n 1 209 ASP n 1 210 THR n 1 211 ASP n 1 212 TYR n 1 213 SER n 1 214 ILE n 1 215 ALA n 1 216 GLU n 1 217 ALA n 1 218 ALA n 1 219 PHE n 1 220 ASN n 1 221 LYS n 1 222 GLY n 1 223 GLU n 1 224 THR n 1 225 ALA n 1 226 MET n 1 227 THR n 1 228 ILE n 1 229 ASN n 1 230 GLY n 1 231 PRO n 1 232 TRP n 1 233 ALA n 1 234 TRP n 1 235 SER n 1 236 ASN n 1 237 ILE n 1 238 ASP n 1 239 THR n 1 240 SER n 1 241 LYS n 1 242 VAL n 1 243 ASN n 1 244 TYR n 1 245 GLY n 1 246 VAL n 1 247 THR n 1 248 VAL n 1 249 LEU n 1 250 PRO n 1 251 THR n 1 252 PHE n 1 253 LYS n 1 254 GLY n 1 255 GLN n 1 256 PRO n 1 257 SER n 1 258 LYS n 1 259 PRO n 1 260 PHE n 1 261 VAL n 1 262 GLY n 1 263 VAL n 1 264 LEU n 1 265 SER n 1 266 ALA n 1 267 GLY n 1 268 ILE n 1 269 ASN n 1 270 ALA n 1 271 ALA n 1 272 SER n 1 273 PRO n 1 274 ASN n 1 275 LYS n 1 276 GLU n 1 277 LEU n 1 278 ALA n 1 279 LYS n 1 280 GLU n 1 281 PHE n 1 282 LEU n 1 283 GLU n 1 284 ASN n 1 285 TYR n 1 286 LEU n 1 287 LEU n 1 288 THR n 1 289 ASP n 1 290 GLU n 1 291 GLY n 1 292 LEU n 1 293 GLU n 1 294 ALA n 1 295 VAL n 1 296 ASN n 1 297 LYS n 1 298 ASP n 1 299 LYS n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 ALA n 1 304 VAL n 1 305 ALA n 1 306 LEU n 1 307 LYS n 1 308 SER n 1 309 TYR n 1 310 GLU n 1 311 GLU n 1 312 GLU n 1 313 LEU n 1 314 ALA n 1 315 LYS n 1 316 ASP n 1 317 PRO n 1 318 ARG n 1 319 ILE n 1 320 ALA n 1 321 ALA n 1 322 THR n 1 323 MET n 1 324 GLU n 1 325 ASN n 1 326 ALA n 1 327 GLN n 1 328 LYS n 1 329 GLY n 1 330 GLU n 1 331 ILE n 1 332 MET n 1 333 PRO n 1 334 ASN n 1 335 ILE n 1 336 PRO n 1 337 GLN n 1 338 MET n 1 339 SER n 1 340 ALA n 1 341 PHE n 1 342 TRP n 1 343 TYR n 1 344 ALA n 1 345 VAL n 1 346 ARG n 1 347 THR n 1 348 ALA n 1 349 VAL n 1 350 ILE n 1 351 ASN n 1 352 ALA n 1 353 ALA n 1 354 SER n 1 355 GLY n 1 356 ARG n 1 357 GLN n 1 358 THR n 1 359 VAL n 1 360 ASP n 1 361 GLU n 1 362 ALA n 1 363 LEU n 1 364 LYS n 1 365 ASP n 1 366 ALA n 1 367 GLN n 1 368 THR n 1 369 ASN n 1 370 ALA n 1 371 ALA n 1 372 ALA n 1 373 GLU n 1 374 PHE n 1 375 LYS n 1 376 THR n 1 377 ASN n 1 378 ASN n 1 379 ILE n 1 380 PHE n 1 381 CYS n 1 382 SER n 1 383 ASN n 1 384 PRO n 1 385 ASN n 1 386 HIS n 1 387 ARG n 1 388 THR n 1 389 PRO n 1 390 THR n 1 391 LEU n 1 392 THR n 1 393 SER n 1 394 ILE n 1 395 TYR n 1 396 CYS n 1 397 ARG n 1 398 GLY n 1 399 CYS n 1 400 SER n 1 401 LYS n 1 402 PRO n 1 403 LEU n 1 404 CYS n 1 405 ALA n 1 406 SER n 1 407 CYS n 1 408 VAL n 1 409 LEU n 1 410 LEU n 1 411 ASP n 1 412 SER n 1 413 SER n 1 414 HIS n 1 415 SER n 1 416 GLU n 1 417 LEU n 1 418 LYS n 1 419 CYS n 1 420 ASP n 1 421 ILE n 1 422 SER n 1 423 ALA n 1 424 GLU n 1 425 ILE n 1 426 GLN n 1 427 GLN n 1 428 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 368 ? ? 'malE, b4034, JW3994' ? ? ? ? ? ? 'Escherichia coli (strain K12)' 83333 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 369 428 human ? 'PML, MYL, PP8675, RNF71, TRIM19' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MALE_ECOLI P0AEX9 ? 1 ;KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT ; 27 2 UNP PML_HUMAN P29590 ? 1 KTNNIFCSNPNHRTPTLTSIYCRGCSKPLCCSCALLDSSHSELKCDISAEIQQR 183 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8J25 A 3 ? 368 ? P0AEX9 27 ? 392 ? -189 176 2 2 8J25 A 375 ? 428 ? P29590 183 ? 236 ? 183 236 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8J25 MET A 1 ? UNP P0AEX9 ? ? 'initiating methionine' -191 1 1 8J25 GLY A 2 ? UNP P0AEX9 ? ? 'expression tag' -190 2 1 8J25 ASN A 369 ? UNP P0AEX9 ? ? linker 177 3 1 8J25 ALA A 370 ? UNP P0AEX9 ? ? linker 178 4 1 8J25 ALA A 371 ? UNP P0AEX9 ? ? linker 179 5 1 8J25 ALA A 372 ? UNP P0AEX9 ? ? linker 180 6 1 8J25 GLU A 373 ? UNP P0AEX9 ? ? linker 181 7 1 8J25 PHE A 374 ? UNP P0AEX9 ? ? linker 182 8 2 8J25 ALA A 405 ? UNP P29590 CYS 213 'engineered mutation' 213 9 2 8J25 VAL A 408 ? UNP P29590 ALA 216 'engineered mutation' 216 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8J25 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.50 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.85 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '22% PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9791 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9791 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8J25 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 44.08 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27057 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.24 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.092 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.988 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.184 _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2853 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.393 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8J25 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.60 _refine.ls_d_res_low 44.08 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27057 _refine.ls_number_reflns_R_free 1255 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.86 _refine.ls_percent_reflns_R_free 4.64 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2063 _refine.ls_R_factor_R_free 0.2478 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2042 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.18 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.46 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 44.08 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 3248 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 3181 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 3285 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.630 ? 4464 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 17.986 ? 1199 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.042 ? 494 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 576 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.60 2.70 . . 135 2853 98.00 . . . . 0.3504 . . . . . . . . . . . 0.3717 'X-RAY DIFFRACTION' 2.70 2.83 . . 131 2866 99.00 . . . . 0.3138 . . . . . . . . . . . 0.4081 'X-RAY DIFFRACTION' 2.83 2.98 . . 105 2954 99.00 . . . . 0.3048 . . . . . . . . . . . 0.3672 'X-RAY DIFFRACTION' 2.98 3.16 . . 145 2866 99.00 . . . . 0.2789 . . . . . . . . . . . 0.3259 'X-RAY DIFFRACTION' 3.16 3.41 . . 161 2839 99.00 . . . . 0.2544 . . . . . . . . . . . 0.2921 'X-RAY DIFFRACTION' 3.41 3.75 . . 139 2860 99.00 . . . . 0.1965 . . . . . . . . . . . 0.2746 'X-RAY DIFFRACTION' 3.75 4.29 . . 123 2902 99.00 . . . . 0.1672 . . . . . . . . . . . 0.2173 'X-RAY DIFFRACTION' 4.29 5.40 . . 134 2855 99.00 . . . . 0.1528 . . . . . . . . . . . 0.1719 'X-RAY DIFFRACTION' 5.41 44.08 . . 182 2807 98.00 . . . . 0.1559 . . . . . . . . . . . 0.2055 # _struct.entry_id 8J25 _struct.title 'Crystal structure of PML B-box2 mutant' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8J25 _struct_keywords.text 'PML, TRIM19, B-Box2, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 18 ? GLY A 34 ? GLY A -174 GLY A -158 1 ? 17 HELX_P HELX_P2 AA2 LYS A 44 ? ALA A 53 ? LYS A -148 ALA A -139 1 ? 10 HELX_P HELX_P3 AA3 ALA A 54 ? GLY A 56 ? ALA A -138 GLY A -136 5 ? 3 HELX_P HELX_P4 AA4 ARG A 68 ? SER A 75 ? ARG A -124 SER A -117 1 ? 8 HELX_P HELX_P5 AA5 ASP A 84 ? ASP A 89 ? ASP A -108 ASP A -103 1 ? 6 HELX_P HELX_P6 AA6 TYR A 92 ? VAL A 99 ? TYR A -100 VAL A -93 1 ? 8 HELX_P HELX_P7 AA7 GLU A 133 ? ALA A 143 ? GLU A -59 ALA A -49 1 ? 11 HELX_P HELX_P8 AA8 GLU A 155 ? ASP A 166 ? GLU A -37 ASP A -26 1 ? 12 HELX_P HELX_P9 AA9 ASN A 187 ? ASN A 203 ? ASN A -5 ASN A 11 1 ? 17 HELX_P HELX_P10 AB1 ASP A 211 ? LYS A 221 ? ASP A 19 LYS A 29 1 ? 11 HELX_P HELX_P11 AB2 GLY A 230 ? TRP A 232 ? GLY A 38 TRP A 40 5 ? 3 HELX_P HELX_P12 AB3 ALA A 233 ? SER A 240 ? ALA A 41 SER A 48 1 ? 8 HELX_P HELX_P13 AB4 ASN A 274 ? TYR A 285 ? ASN A 82 TYR A 93 1 ? 12 HELX_P HELX_P14 AB5 THR A 288 ? LYS A 297 ? THR A 96 LYS A 105 1 ? 10 HELX_P HELX_P15 AB6 LEU A 306 ? ALA A 314 ? LEU A 114 ALA A 122 1 ? 9 HELX_P HELX_P16 AB7 ASP A 316 ? GLY A 329 ? ASP A 124 GLY A 137 1 ? 14 HELX_P HELX_P17 AB8 GLN A 337 ? GLY A 355 ? GLN A 145 GLY A 163 1 ? 19 HELX_P HELX_P18 AB9 THR A 358 ? PHE A 374 ? THR A 166 PHE A 182 1 ? 17 HELX_P HELX_P19 AC1 CYS A 404 ? ASP A 411 ? CYS A 212 ASP A 219 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B GLC . O4 ? ? ? 1_555 B GLC . C1 ? ? B GLC 1 B GLC 2 1_555 ? ? ? ? ? ? ? 1.412 ? ? metalc1 metalc ? ? A CYS 381 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 189 A ZN 2501 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc2 metalc ? ? A HIS 386 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 194 A ZN 2501 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc3 metalc ? ? A CYS 396 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 204 A ZN 2502 1_555 ? ? ? ? ? ? ? 2.321 ? ? metalc4 metalc ? ? A CYS 399 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 207 A ZN 2502 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc5 metalc ? ? A CYS 404 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 212 A ZN 2501 1_555 ? ? ? ? ? ? ? 2.311 ? ? metalc6 metalc ? ? A CYS 407 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 215 A ZN 2501 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc7 metalc ? ? A HIS 414 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 222 A ZN 2502 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc8 metalc ? ? A CYS 419 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 227 A ZN 2502 1_555 ? ? ? ? ? ? ? 2.326 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 4 ? AA5 ? 4 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 37 ? GLU A 40 ? VAL A -155 GLU A -152 AA1 2 LEU A 9 ? TRP A 12 ? LEU A -183 TRP A -180 AA1 3 ILE A 61 ? ALA A 65 ? ILE A -131 ALA A -127 AA1 4 PHE A 260 ? ILE A 268 ? PHE A 68 ILE A 76 AA1 5 TYR A 108 ? GLU A 113 ? TYR A -84 GLU A -79 AA1 6 ALA A 303 ? VAL A 304 ? ALA A 111 VAL A 112 AA2 1 VAL A 37 ? GLU A 40 ? VAL A -155 GLU A -152 AA2 2 LEU A 9 ? TRP A 12 ? LEU A -183 TRP A -180 AA2 3 ILE A 61 ? ALA A 65 ? ILE A -131 ALA A -127 AA2 4 PHE A 260 ? ILE A 268 ? PHE A 68 ILE A 76 AA2 5 GLU A 330 ? ILE A 331 ? GLU A 138 ILE A 139 AA3 1 ARG A 100 ? TYR A 101 ? ARG A -92 TYR A -91 AA3 2 LYS A 104 ? LEU A 105 ? LYS A -88 LEU A -87 AA4 1 SER A 147 ? LEU A 149 ? SER A -45 LEU A -43 AA4 2 THR A 224 ? ASN A 229 ? THR A 32 ASN A 37 AA4 3 SER A 116 ? ASN A 120 ? SER A -76 ASN A -72 AA4 4 TYR A 244 ? THR A 247 ? TYR A 52 THR A 55 AA5 1 TYR A 169 ? TYR A 173 ? TYR A -23 TYR A -19 AA5 2 LYS A 177 ? GLY A 184 ? LYS A -15 GLY A -8 AA5 3 ILE A 394 ? CYS A 396 ? ILE A 202 CYS A 204 AA5 4 LYS A 401 ? PRO A 402 ? LYS A 209 PRO A 210 AA6 1 ILE A 379 ? PHE A 380 ? ILE A 187 PHE A 188 AA6 2 LEU A 391 ? THR A 392 ? LEU A 199 THR A 200 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 40 ? O GLU A -152 N ILE A 11 ? N ILE A -181 AA1 2 3 N TRP A 12 ? N TRP A -180 O ILE A 61 ? O ILE A -131 AA1 3 4 N ILE A 62 ? N ILE A -130 O GLY A 267 ? O GLY A 75 AA1 4 5 O GLY A 262 ? O GLY A 70 N GLU A 113 ? N GLU A -79 AA1 5 6 N VAL A 112 ? N VAL A -80 O ALA A 303 ? O ALA A 111 AA2 1 2 O GLU A 40 ? O GLU A -152 N ILE A 11 ? N ILE A -181 AA2 2 3 N TRP A 12 ? N TRP A -180 O ILE A 61 ? O ILE A -131 AA2 3 4 N ILE A 62 ? N ILE A -130 O GLY A 267 ? O GLY A 75 AA2 4 5 N VAL A 261 ? N VAL A 69 O GLU A 330 ? O GLU A 138 AA3 1 2 N TYR A 101 ? N TYR A -91 O LYS A 104 ? O LYS A -88 AA4 1 2 N SER A 147 ? N SER A -45 O ALA A 225 ? O ALA A 33 AA4 2 3 O THR A 227 ? O THR A 35 N ILE A 118 ? N ILE A -74 AA4 3 4 N LEU A 117 ? N LEU A -75 O THR A 247 ? O THR A 55 AA5 1 2 N LYS A 172 ? N LYS A -20 O ASP A 179 ? O ASP A -13 AA5 2 3 N TYR A 178 ? N TYR A -14 O TYR A 395 ? O TYR A 203 AA5 3 4 N CYS A 396 ? N CYS A 204 O LYS A 401 ? O LYS A 209 AA6 1 2 N ILE A 379 ? N ILE A 187 O THR A 392 ? O THR A 200 # _atom_sites.entry_id 8J25 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008226 _atom_sites.fract_transf_matrix[1][2] 0.004749 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009498 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006198 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -191 ? ? ? A . n A 1 2 GLY 2 -190 ? ? ? A . n A 1 3 LYS 3 -189 ? ? ? A . n A 1 4 ILE 4 -188 -188 ILE ILE A . n A 1 5 GLU 5 -187 -187 GLU GLU A . n A 1 6 GLU 6 -186 -186 GLU GLU A . n A 1 7 GLY 7 -185 -185 GLY GLY A . n A 1 8 LYS 8 -184 -184 LYS LYS A . n A 1 9 LEU 9 -183 -183 LEU LEU A . n A 1 10 VAL 10 -182 -182 VAL VAL A . n A 1 11 ILE 11 -181 -181 ILE ILE A . n A 1 12 TRP 12 -180 -180 TRP TRP A . n A 1 13 ILE 13 -179 -179 ILE ILE A . n A 1 14 ASN 14 -178 -178 ASN ASN A . n A 1 15 GLY 15 -177 -177 GLY GLY A . n A 1 16 ASP 16 -176 -176 ASP ASP A . n A 1 17 LYS 17 -175 -175 LYS LYS A . n A 1 18 GLY 18 -174 -174 GLY GLY A . n A 1 19 TYR 19 -173 -173 TYR TYR A . n A 1 20 ASN 20 -172 -172 ASN ASN A . n A 1 21 GLY 21 -171 -171 GLY GLY A . n A 1 22 LEU 22 -170 -170 LEU LEU A . n A 1 23 ALA 23 -169 -169 ALA ALA A . n A 1 24 GLU 24 -168 -168 GLU GLU A . n A 1 25 VAL 25 -167 -167 VAL VAL A . n A 1 26 GLY 26 -166 -166 GLY GLY A . n A 1 27 LYS 27 -165 -165 LYS LYS A . n A 1 28 LYS 28 -164 -164 LYS LYS A . n A 1 29 PHE 29 -163 -163 PHE PHE A . n A 1 30 GLU 30 -162 -162 GLU GLU A . n A 1 31 LYS 31 -161 -161 LYS LYS A . n A 1 32 ASP 32 -160 -160 ASP ASP A . n A 1 33 THR 33 -159 -159 THR THR A . n A 1 34 GLY 34 -158 -158 GLY GLY A . n A 1 35 ILE 35 -157 -157 ILE ILE A . n A 1 36 LYS 36 -156 -156 LYS LYS A . n A 1 37 VAL 37 -155 -155 VAL VAL A . n A 1 38 THR 38 -154 -154 THR THR A . n A 1 39 VAL 39 -153 -153 VAL VAL A . n A 1 40 GLU 40 -152 -152 GLU GLU A . n A 1 41 HIS 41 -151 -151 HIS HIS A . n A 1 42 PRO 42 -150 -150 PRO PRO A . n A 1 43 ASP 43 -149 -149 ASP ASP A . n A 1 44 LYS 44 -148 -148 LYS LYS A . n A 1 45 LEU 45 -147 -147 LEU LEU A . n A 1 46 GLU 46 -146 -146 GLU GLU A . n A 1 47 GLU 47 -145 -145 GLU GLU A . n A 1 48 LYS 48 -144 -144 LYS LYS A . n A 1 49 PHE 49 -143 -143 PHE PHE A . n A 1 50 PRO 50 -142 -142 PRO PRO A . n A 1 51 GLN 51 -141 -141 GLN GLN A . n A 1 52 VAL 52 -140 -140 VAL VAL A . n A 1 53 ALA 53 -139 -139 ALA ALA A . n A 1 54 ALA 54 -138 -138 ALA ALA A . n A 1 55 THR 55 -137 -137 THR THR A . n A 1 56 GLY 56 -136 -136 GLY GLY A . n A 1 57 ASP 57 -135 -135 ASP ASP A . n A 1 58 GLY 58 -134 -134 GLY GLY A . n A 1 59 PRO 59 -133 -133 PRO PRO A . n A 1 60 ASP 60 -132 -132 ASP ASP A . n A 1 61 ILE 61 -131 -131 ILE ILE A . n A 1 62 ILE 62 -130 -130 ILE ILE A . n A 1 63 PHE 63 -129 -129 PHE PHE A . n A 1 64 TRP 64 -128 -128 TRP TRP A . n A 1 65 ALA 65 -127 -127 ALA ALA A . n A 1 66 HIS 66 -126 -126 HIS HIS A . n A 1 67 ASP 67 -125 -125 ASP ASP A . n A 1 68 ARG 68 -124 -124 ARG ARG A . n A 1 69 PHE 69 -123 -123 PHE PHE A . n A 1 70 GLY 70 -122 -122 GLY GLY A . n A 1 71 GLY 71 -121 -121 GLY GLY A . n A 1 72 TYR 72 -120 -120 TYR TYR A . n A 1 73 ALA 73 -119 -119 ALA ALA A . n A 1 74 GLN 74 -118 -118 GLN GLN A . n A 1 75 SER 75 -117 -117 SER SER A . n A 1 76 GLY 76 -116 -116 GLY GLY A . n A 1 77 LEU 77 -115 -115 LEU LEU A . n A 1 78 LEU 78 -114 -114 LEU LEU A . n A 1 79 ALA 79 -113 -113 ALA ALA A . n A 1 80 GLU 80 -112 -112 GLU GLU A . n A 1 81 ILE 81 -111 -111 ILE ILE A . n A 1 82 THR 82 -110 -110 THR THR A . n A 1 83 PRO 83 -109 -109 PRO PRO A . n A 1 84 ASP 84 -108 -108 ASP ASP A . n A 1 85 LYS 85 -107 -107 LYS LYS A . n A 1 86 ALA 86 -106 -106 ALA ALA A . n A 1 87 PHE 87 -105 -105 PHE PHE A . n A 1 88 GLN 88 -104 -104 GLN GLN A . n A 1 89 ASP 89 -103 -103 ASP ASP A . n A 1 90 LYS 90 -102 -102 LYS LYS A . n A 1 91 LEU 91 -101 -101 LEU LEU A . n A 1 92 TYR 92 -100 -100 TYR TYR A . n A 1 93 PRO 93 -99 -99 PRO PRO A . n A 1 94 PHE 94 -98 -98 PHE PHE A . n A 1 95 THR 95 -97 -97 THR THR A . n A 1 96 TRP 96 -96 -96 TRP TRP A . n A 1 97 ASP 97 -95 -95 ASP ASP A . n A 1 98 ALA 98 -94 -94 ALA ALA A . n A 1 99 VAL 99 -93 -93 VAL VAL A . n A 1 100 ARG 100 -92 -92 ARG ARG A . n A 1 101 TYR 101 -91 -91 TYR TYR A . n A 1 102 ASN 102 -90 -90 ASN ASN A . n A 1 103 GLY 103 -89 -89 GLY GLY A . n A 1 104 LYS 104 -88 -88 LYS LYS A . n A 1 105 LEU 105 -87 -87 LEU LEU A . n A 1 106 ILE 106 -86 -86 ILE ILE A . n A 1 107 ALA 107 -85 -85 ALA ALA A . n A 1 108 TYR 108 -84 -84 TYR TYR A . n A 1 109 PRO 109 -83 -83 PRO PRO A . n A 1 110 ILE 110 -82 -82 ILE ILE A . n A 1 111 ALA 111 -81 -81 ALA ALA A . n A 1 112 VAL 112 -80 -80 VAL VAL A . n A 1 113 GLU 113 -79 -79 GLU GLU A . n A 1 114 ALA 114 -78 -78 ALA ALA A . n A 1 115 LEU 115 -77 -77 LEU LEU A . n A 1 116 SER 116 -76 -76 SER SER A . n A 1 117 LEU 117 -75 -75 LEU LEU A . n A 1 118 ILE 118 -74 -74 ILE ILE A . n A 1 119 TYR 119 -73 -73 TYR TYR A . n A 1 120 ASN 120 -72 -72 ASN ASN A . n A 1 121 LYS 121 -71 -71 LYS LYS A . n A 1 122 ASP 122 -70 -70 ASP ASP A . n A 1 123 LEU 123 -69 -69 LEU LEU A . n A 1 124 LEU 124 -68 -68 LEU LEU A . n A 1 125 PRO 125 -67 -67 PRO PRO A . n A 1 126 ASN 126 -66 -66 ASN ASN A . n A 1 127 PRO 127 -65 -65 PRO PRO A . n A 1 128 PRO 128 -64 -64 PRO PRO A . n A 1 129 LYS 129 -63 -63 LYS LYS A . n A 1 130 THR 130 -62 -62 THR THR A . n A 1 131 TRP 131 -61 -61 TRP TRP A . n A 1 132 GLU 132 -60 -60 GLU GLU A . n A 1 133 GLU 133 -59 -59 GLU GLU A . n A 1 134 ILE 134 -58 -58 ILE ILE A . n A 1 135 PRO 135 -57 -57 PRO PRO A . n A 1 136 ALA 136 -56 -56 ALA ALA A . n A 1 137 LEU 137 -55 -55 LEU LEU A . n A 1 138 ASP 138 -54 -54 ASP ASP A . n A 1 139 LYS 139 -53 -53 LYS LYS A . n A 1 140 GLU 140 -52 -52 GLU GLU A . n A 1 141 LEU 141 -51 -51 LEU LEU A . n A 1 142 LYS 142 -50 -50 LYS LYS A . n A 1 143 ALA 143 -49 -49 ALA ALA A . n A 1 144 LYS 144 -48 -48 LYS LYS A . n A 1 145 GLY 145 -47 -47 GLY GLY A . n A 1 146 LYS 146 -46 -46 LYS LYS A . n A 1 147 SER 147 -45 -45 SER SER A . n A 1 148 ALA 148 -44 -44 ALA ALA A . n A 1 149 LEU 149 -43 -43 LEU LEU A . n A 1 150 MET 150 -42 -42 MET MET A . n A 1 151 PHE 151 -41 -41 PHE PHE A . n A 1 152 ASN 152 -40 -40 ASN ASN A . n A 1 153 LEU 153 -39 -39 LEU LEU A . n A 1 154 GLN 154 -38 -38 GLN GLN A . n A 1 155 GLU 155 -37 -37 GLU GLU A . n A 1 156 PRO 156 -36 -36 PRO PRO A . n A 1 157 TYR 157 -35 -35 TYR TYR A . n A 1 158 PHE 158 -34 -34 PHE PHE A . n A 1 159 THR 159 -33 -33 THR THR A . n A 1 160 TRP 160 -32 -32 TRP TRP A . n A 1 161 PRO 161 -31 -31 PRO PRO A . n A 1 162 LEU 162 -30 -30 LEU LEU A . n A 1 163 ILE 163 -29 -29 ILE ILE A . n A 1 164 ALA 164 -28 -28 ALA ALA A . n A 1 165 ALA 165 -27 -27 ALA ALA A . n A 1 166 ASP 166 -26 -26 ASP ASP A . n A 1 167 GLY 167 -25 -25 GLY GLY A . n A 1 168 GLY 168 -24 -24 GLY GLY A . n A 1 169 TYR 169 -23 -23 TYR TYR A . n A 1 170 ALA 170 -22 -22 ALA ALA A . n A 1 171 PHE 171 -21 -21 PHE PHE A . n A 1 172 LYS 172 -20 -20 LYS LYS A . n A 1 173 TYR 173 -19 -19 TYR TYR A . n A 1 174 GLU 174 -18 -18 GLU GLU A . n A 1 175 ASN 175 -17 -17 ASN ASN A . n A 1 176 GLY 176 -16 -16 GLY GLY A . n A 1 177 LYS 177 -15 -15 LYS LYS A . n A 1 178 TYR 178 -14 -14 TYR TYR A . n A 1 179 ASP 179 -13 -13 ASP ASP A . n A 1 180 ILE 180 -12 -12 ILE ILE A . n A 1 181 LYS 181 -11 -11 LYS LYS A . n A 1 182 ASP 182 -10 -10 ASP ASP A . n A 1 183 VAL 183 -9 -9 VAL VAL A . n A 1 184 GLY 184 -8 -8 GLY GLY A . n A 1 185 VAL 185 -7 -7 VAL VAL A . n A 1 186 ASP 186 -6 -6 ASP ASP A . n A 1 187 ASN 187 -5 -5 ASN ASN A . n A 1 188 ALA 188 -4 -4 ALA ALA A . n A 1 189 GLY 189 -3 -3 GLY GLY A . n A 1 190 ALA 190 -2 -2 ALA ALA A . n A 1 191 LYS 191 -1 -1 LYS LYS A . n A 1 192 ALA 192 0 0 ALA ALA A . n A 1 193 GLY 193 1 1 GLY GLY A . n A 1 194 LEU 194 2 2 LEU LEU A . n A 1 195 THR 195 3 3 THR THR A . n A 1 196 PHE 196 4 4 PHE PHE A . n A 1 197 LEU 197 5 5 LEU LEU A . n A 1 198 VAL 198 6 6 VAL VAL A . n A 1 199 ASP 199 7 7 ASP ASP A . n A 1 200 LEU 200 8 8 LEU LEU A . n A 1 201 ILE 201 9 9 ILE ILE A . n A 1 202 LYS 202 10 10 LYS LYS A . n A 1 203 ASN 203 11 11 ASN ASN A . n A 1 204 LYS 204 12 12 LYS LYS A . n A 1 205 HIS 205 13 13 HIS HIS A . n A 1 206 MET 206 14 14 MET MET A . n A 1 207 ASN 207 15 15 ASN ASN A . n A 1 208 ALA 208 16 16 ALA ALA A . n A 1 209 ASP 209 17 17 ASP ASP A . n A 1 210 THR 210 18 18 THR THR A . n A 1 211 ASP 211 19 19 ASP ASP A . n A 1 212 TYR 212 20 20 TYR TYR A . n A 1 213 SER 213 21 21 SER SER A . n A 1 214 ILE 214 22 22 ILE ILE A . n A 1 215 ALA 215 23 23 ALA ALA A . n A 1 216 GLU 216 24 24 GLU GLU A . n A 1 217 ALA 217 25 25 ALA ALA A . n A 1 218 ALA 218 26 26 ALA ALA A . n A 1 219 PHE 219 27 27 PHE PHE A . n A 1 220 ASN 220 28 28 ASN ASN A . n A 1 221 LYS 221 29 29 LYS LYS A . n A 1 222 GLY 222 30 30 GLY GLY A . n A 1 223 GLU 223 31 31 GLU GLU A . n A 1 224 THR 224 32 32 THR THR A . n A 1 225 ALA 225 33 33 ALA ALA A . n A 1 226 MET 226 34 34 MET MET A . n A 1 227 THR 227 35 35 THR THR A . n A 1 228 ILE 228 36 36 ILE ILE A . n A 1 229 ASN 229 37 37 ASN ASN A . n A 1 230 GLY 230 38 38 GLY GLY A . n A 1 231 PRO 231 39 39 PRO PRO A . n A 1 232 TRP 232 40 40 TRP TRP A . n A 1 233 ALA 233 41 41 ALA ALA A . n A 1 234 TRP 234 42 42 TRP TRP A . n A 1 235 SER 235 43 43 SER SER A . n A 1 236 ASN 236 44 44 ASN ASN A . n A 1 237 ILE 237 45 45 ILE ILE A . n A 1 238 ASP 238 46 46 ASP ASP A . n A 1 239 THR 239 47 47 THR THR A . n A 1 240 SER 240 48 48 SER SER A . n A 1 241 LYS 241 49 49 LYS LYS A . n A 1 242 VAL 242 50 50 VAL VAL A . n A 1 243 ASN 243 51 51 ASN ASN A . n A 1 244 TYR 244 52 52 TYR TYR A . n A 1 245 GLY 245 53 53 GLY GLY A . n A 1 246 VAL 246 54 54 VAL VAL A . n A 1 247 THR 247 55 55 THR THR A . n A 1 248 VAL 248 56 56 VAL VAL A . n A 1 249 LEU 249 57 57 LEU LEU A . n A 1 250 PRO 250 58 58 PRO PRO A . n A 1 251 THR 251 59 59 THR THR A . n A 1 252 PHE 252 60 60 PHE PHE A . n A 1 253 LYS 253 61 61 LYS LYS A . n A 1 254 GLY 254 62 62 GLY GLY A . n A 1 255 GLN 255 63 63 GLN GLN A . n A 1 256 PRO 256 64 64 PRO PRO A . n A 1 257 SER 257 65 65 SER SER A . n A 1 258 LYS 258 66 66 LYS LYS A . n A 1 259 PRO 259 67 67 PRO PRO A . n A 1 260 PHE 260 68 68 PHE PHE A . n A 1 261 VAL 261 69 69 VAL VAL A . n A 1 262 GLY 262 70 70 GLY GLY A . n A 1 263 VAL 263 71 71 VAL VAL A . n A 1 264 LEU 264 72 72 LEU LEU A . n A 1 265 SER 265 73 73 SER SER A . n A 1 266 ALA 266 74 74 ALA ALA A . n A 1 267 GLY 267 75 75 GLY GLY A . n A 1 268 ILE 268 76 76 ILE ILE A . n A 1 269 ASN 269 77 77 ASN ASN A . n A 1 270 ALA 270 78 78 ALA ALA A . n A 1 271 ALA 271 79 79 ALA ALA A . n A 1 272 SER 272 80 80 SER SER A . n A 1 273 PRO 273 81 81 PRO PRO A . n A 1 274 ASN 274 82 82 ASN ASN A . n A 1 275 LYS 275 83 83 LYS LYS A . n A 1 276 GLU 276 84 84 GLU GLU A . n A 1 277 LEU 277 85 85 LEU LEU A . n A 1 278 ALA 278 86 86 ALA ALA A . n A 1 279 LYS 279 87 87 LYS LYS A . n A 1 280 GLU 280 88 88 GLU GLU A . n A 1 281 PHE 281 89 89 PHE PHE A . n A 1 282 LEU 282 90 90 LEU LEU A . n A 1 283 GLU 283 91 91 GLU GLU A . n A 1 284 ASN 284 92 92 ASN ASN A . n A 1 285 TYR 285 93 93 TYR TYR A . n A 1 286 LEU 286 94 94 LEU LEU A . n A 1 287 LEU 287 95 95 LEU LEU A . n A 1 288 THR 288 96 96 THR THR A . n A 1 289 ASP 289 97 97 ASP ASP A . n A 1 290 GLU 290 98 98 GLU GLU A . n A 1 291 GLY 291 99 99 GLY GLY A . n A 1 292 LEU 292 100 100 LEU LEU A . n A 1 293 GLU 293 101 101 GLU GLU A . n A 1 294 ALA 294 102 102 ALA ALA A . n A 1 295 VAL 295 103 103 VAL VAL A . n A 1 296 ASN 296 104 104 ASN ASN A . n A 1 297 LYS 297 105 105 LYS LYS A . n A 1 298 ASP 298 106 106 ASP ASP A . n A 1 299 LYS 299 107 107 LYS LYS A . n A 1 300 PRO 300 108 108 PRO PRO A . n A 1 301 LEU 301 109 109 LEU LEU A . n A 1 302 GLY 302 110 110 GLY GLY A . n A 1 303 ALA 303 111 111 ALA ALA A . n A 1 304 VAL 304 112 112 VAL VAL A . n A 1 305 ALA 305 113 113 ALA ALA A . n A 1 306 LEU 306 114 114 LEU LEU A . n A 1 307 LYS 307 115 115 LYS LYS A . n A 1 308 SER 308 116 116 SER SER A . n A 1 309 TYR 309 117 117 TYR TYR A . n A 1 310 GLU 310 118 118 GLU GLU A . n A 1 311 GLU 311 119 119 GLU GLU A . n A 1 312 GLU 312 120 120 GLU GLU A . n A 1 313 LEU 313 121 121 LEU LEU A . n A 1 314 ALA 314 122 122 ALA ALA A . n A 1 315 LYS 315 123 123 LYS LYS A . n A 1 316 ASP 316 124 124 ASP ASP A . n A 1 317 PRO 317 125 125 PRO PRO A . n A 1 318 ARG 318 126 126 ARG ARG A . n A 1 319 ILE 319 127 127 ILE ILE A . n A 1 320 ALA 320 128 128 ALA ALA A . n A 1 321 ALA 321 129 129 ALA ALA A . n A 1 322 THR 322 130 130 THR THR A . n A 1 323 MET 323 131 131 MET MET A . n A 1 324 GLU 324 132 132 GLU GLU A . n A 1 325 ASN 325 133 133 ASN ASN A . n A 1 326 ALA 326 134 134 ALA ALA A . n A 1 327 GLN 327 135 135 GLN GLN A . n A 1 328 LYS 328 136 136 LYS LYS A . n A 1 329 GLY 329 137 137 GLY GLY A . n A 1 330 GLU 330 138 138 GLU GLU A . n A 1 331 ILE 331 139 139 ILE ILE A . n A 1 332 MET 332 140 140 MET MET A . n A 1 333 PRO 333 141 141 PRO PRO A . n A 1 334 ASN 334 142 142 ASN ASN A . n A 1 335 ILE 335 143 143 ILE ILE A . n A 1 336 PRO 336 144 144 PRO PRO A . n A 1 337 GLN 337 145 145 GLN GLN A . n A 1 338 MET 338 146 146 MET MET A . n A 1 339 SER 339 147 147 SER SER A . n A 1 340 ALA 340 148 148 ALA ALA A . n A 1 341 PHE 341 149 149 PHE PHE A . n A 1 342 TRP 342 150 150 TRP TRP A . n A 1 343 TYR 343 151 151 TYR TYR A . n A 1 344 ALA 344 152 152 ALA ALA A . n A 1 345 VAL 345 153 153 VAL VAL A . n A 1 346 ARG 346 154 154 ARG ARG A . n A 1 347 THR 347 155 155 THR THR A . n A 1 348 ALA 348 156 156 ALA ALA A . n A 1 349 VAL 349 157 157 VAL VAL A . n A 1 350 ILE 350 158 158 ILE ILE A . n A 1 351 ASN 351 159 159 ASN ASN A . n A 1 352 ALA 352 160 160 ALA ALA A . n A 1 353 ALA 353 161 161 ALA ALA A . n A 1 354 SER 354 162 162 SER SER A . n A 1 355 GLY 355 163 163 GLY GLY A . n A 1 356 ARG 356 164 164 ARG ARG A . n A 1 357 GLN 357 165 165 GLN GLN A . n A 1 358 THR 358 166 166 THR THR A . n A 1 359 VAL 359 167 167 VAL VAL A . n A 1 360 ASP 360 168 168 ASP ASP A . n A 1 361 GLU 361 169 169 GLU GLU A . n A 1 362 ALA 362 170 170 ALA ALA A . n A 1 363 LEU 363 171 171 LEU LEU A . n A 1 364 LYS 364 172 172 LYS LYS A . n A 1 365 ASP 365 173 173 ASP ASP A . n A 1 366 ALA 366 174 174 ALA ALA A . n A 1 367 GLN 367 175 175 GLN GLN A . n A 1 368 THR 368 176 176 THR THR A . n A 1 369 ASN 369 177 177 ASN ASN A . n A 1 370 ALA 370 178 178 ALA ALA A . n A 1 371 ALA 371 179 179 ALA ALA A . n A 1 372 ALA 372 180 180 ALA ALA A . n A 1 373 GLU 373 181 181 GLU GLU A . n A 1 374 PHE 374 182 182 PHE PHE A . n A 1 375 LYS 375 183 ? ? ? A . n A 1 376 THR 376 184 ? ? ? A . n A 1 377 ASN 377 185 ? ? ? A . n A 1 378 ASN 378 186 186 ASN ASN A . n A 1 379 ILE 379 187 187 ILE ILE A . n A 1 380 PHE 380 188 188 PHE PHE A . n A 1 381 CYS 381 189 189 CYS CYS A . n A 1 382 SER 382 190 190 SER SER A . n A 1 383 ASN 383 191 191 ASN ASN A . n A 1 384 PRO 384 192 192 PRO PRO A . n A 1 385 ASN 385 193 193 ASN ASN A . n A 1 386 HIS 386 194 194 HIS HIS A . n A 1 387 ARG 387 195 195 ARG ARG A . n A 1 388 THR 388 196 196 THR THR A . n A 1 389 PRO 389 197 197 PRO PRO A . n A 1 390 THR 390 198 198 THR THR A . n A 1 391 LEU 391 199 199 LEU LEU A . n A 1 392 THR 392 200 200 THR THR A . n A 1 393 SER 393 201 201 SER SER A . n A 1 394 ILE 394 202 202 ILE ILE A . n A 1 395 TYR 395 203 203 TYR TYR A . n A 1 396 CYS 396 204 204 CYS CYS A . n A 1 397 ARG 397 205 205 ARG ARG A . n A 1 398 GLY 398 206 206 GLY GLY A . n A 1 399 CYS 399 207 207 CYS CYS A . n A 1 400 SER 400 208 208 SER SER A . n A 1 401 LYS 401 209 209 LYS LYS A . n A 1 402 PRO 402 210 210 PRO PRO A . n A 1 403 LEU 403 211 211 LEU LEU A . n A 1 404 CYS 404 212 212 CYS CYS A . n A 1 405 ALA 405 213 213 ALA ALA A . n A 1 406 SER 406 214 214 SER SER A . n A 1 407 CYS 407 215 215 CYS CYS A . n A 1 408 VAL 408 216 216 VAL VAL A . n A 1 409 LEU 409 217 217 LEU LEU A . n A 1 410 LEU 410 218 218 LEU LEU A . n A 1 411 ASP 411 219 219 ASP ASP A . n A 1 412 SER 412 220 220 SER SER A . n A 1 413 SER 413 221 221 SER SER A . n A 1 414 HIS 414 222 222 HIS HIS A . n A 1 415 SER 415 223 223 SER SER A . n A 1 416 GLU 416 224 224 GLU GLU A . n A 1 417 LEU 417 225 225 LEU LEU A . n A 1 418 LYS 418 226 226 LYS LYS A . n A 1 419 CYS 419 227 227 CYS CYS A . n A 1 420 ASP 420 228 ? ? ? A . n A 1 421 ILE 421 229 ? ? ? A . n A 1 422 SER 422 230 ? ? ? A . n A 1 423 ALA 423 231 ? ? ? A . n A 1 424 GLU 424 232 ? ? ? A . n A 1 425 ILE 425 233 ? ? ? A . n A 1 426 GLN 426 234 ? ? ? A . n A 1 427 GLN 427 235 ? ? ? A . n A 1 428 ARG 428 236 ? ? ? A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email chunzhou@zju.edu.cn _pdbx_contact_author.name_first Chun _pdbx_contact_author.name_last Zhou _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-9257-468X # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 2501 2501 ZN ZN A . D 3 ZN 1 2502 3512 ZN ZN A . E 4 HOH 1 2601 46 HOH HOH A . E 4 HOH 2 2602 4 HOH HOH A . E 4 HOH 3 2603 9 HOH HOH A . E 4 HOH 4 2604 42 HOH HOH A . E 4 HOH 5 2605 43 HOH HOH A . E 4 HOH 6 2606 1 HOH HOH A . E 4 HOH 7 2607 17 HOH HOH A . E 4 HOH 8 2608 20 HOH HOH A . E 4 HOH 9 2609 44 HOH HOH A . E 4 HOH 10 2610 6 HOH HOH A . E 4 HOH 11 2611 34 HOH HOH A . E 4 HOH 12 2612 5 HOH HOH A . E 4 HOH 13 2613 29 HOH HOH A . E 4 HOH 14 2614 47 HOH HOH A . E 4 HOH 15 2615 22 HOH HOH A . E 4 HOH 16 2616 2 HOH HOH A . E 4 HOH 17 2617 7 HOH HOH A . E 4 HOH 18 2618 3 HOH HOH A . E 4 HOH 19 2619 41 HOH HOH A . E 4 HOH 20 2620 35 HOH HOH A . E 4 HOH 21 2621 19 HOH HOH A . E 4 HOH 22 2622 15 HOH HOH A . E 4 HOH 23 2623 16 HOH HOH A . E 4 HOH 24 2624 33 HOH HOH A . E 4 HOH 25 2625 31 HOH HOH A . E 4 HOH 26 2626 21 HOH HOH A . E 4 HOH 27 2627 14 HOH HOH A . E 4 HOH 28 2628 48 HOH HOH A . E 4 HOH 29 2629 18 HOH HOH A . E 4 HOH 30 2630 10 HOH HOH A . E 4 HOH 31 2631 12 HOH HOH A . E 4 HOH 32 2632 24 HOH HOH A . E 4 HOH 33 2633 45 HOH HOH A . E 4 HOH 34 2634 13 HOH HOH A . E 4 HOH 35 2635 38 HOH HOH A . E 4 HOH 36 2636 26 HOH HOH A . E 4 HOH 37 2637 37 HOH HOH A . E 4 HOH 38 2638 23 HOH HOH A . E 4 HOH 39 2639 25 HOH HOH A . E 4 HOH 40 2640 39 HOH HOH A . E 4 HOH 41 2641 30 HOH HOH A . E 4 HOH 42 2642 40 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 381 ? A CYS 189 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 NE2 ? A HIS 386 ? A HIS 194 ? 1_555 105.3 ? 2 SG ? A CYS 381 ? A CYS 189 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 SG ? A CYS 404 ? A CYS 212 ? 1_555 113.0 ? 3 NE2 ? A HIS 386 ? A HIS 194 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 SG ? A CYS 404 ? A CYS 212 ? 1_555 109.4 ? 4 SG ? A CYS 381 ? A CYS 189 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 SG ? A CYS 407 ? A CYS 215 ? 1_555 116.8 ? 5 NE2 ? A HIS 386 ? A HIS 194 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 SG ? A CYS 407 ? A CYS 215 ? 1_555 108.4 ? 6 SG ? A CYS 404 ? A CYS 212 ? 1_555 ZN ? C ZN . ? A ZN 2501 ? 1_555 SG ? A CYS 407 ? A CYS 215 ? 1_555 103.7 ? 7 SG ? A CYS 396 ? A CYS 204 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 SG ? A CYS 399 ? A CYS 207 ? 1_555 106.5 ? 8 SG ? A CYS 396 ? A CYS 204 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 ND1 ? A HIS 414 ? A HIS 222 ? 1_555 112.2 ? 9 SG ? A CYS 399 ? A CYS 207 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 ND1 ? A HIS 414 ? A HIS 222 ? 1_555 100.6 ? 10 SG ? A CYS 396 ? A CYS 204 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 SG ? A CYS 419 ? A CYS 227 ? 1_555 113.0 ? 11 SG ? A CYS 399 ? A CYS 207 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 SG ? A CYS 419 ? A CYS 227 ? 1_555 115.9 ? 12 ND1 ? A HIS 414 ? A HIS 222 ? 1_555 ZN ? D ZN . ? A ZN 2502 ? 1_555 SG ? A CYS 419 ? A CYS 227 ? 1_555 108.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-09-20 2 'Structure model' 1 1 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.title' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -8.1984 -31.7373 -13.7408 0.5057 ? 0.0035 ? -0.0179 ? 0.4872 ? 0.0301 ? 0.5005 ? 2.3136 ? -0.1985 ? 0.1850 ? 1.7023 ? 0.1388 ? 2.0629 ? -0.2424 ? 0.2006 ? 0.5249 ? -0.0110 ? 0.2545 ? -0.0168 ? -0.4734 ? -0.2629 ? -0.0406 ? 2 'X-RAY DIFFRACTION' ? refined 0.9703 -47.2505 -0.0426 0.3445 ? 0.0727 ? -0.0035 ? 0.2723 ? -0.1295 ? 0.3862 ? 2.9250 ? -0.2820 ? -0.5721 ? 1.5702 ? -0.4325 ? 1.7978 ? -0.1903 ? -0.3757 ? 0.1131 ? 0.2560 ? 0.2758 ? -0.2613 ? 0.2381 ? -0.1215 ? -0.0670 ? 3 'X-RAY DIFFRACTION' ? refined 0.9265 -42.0594 0.8808 0.3768 ? 0.0783 ? -0.0196 ? 0.3514 ? -0.1284 ? 0.4247 ? 2.1767 ? -0.3464 ? 0.5511 ? 1.2763 ? 0.3520 ? 1.5851 ? -0.1431 ? -0.2122 ? 0.3102 ? 0.3677 ? 0.1917 ? -0.2278 ? -0.1066 ? -0.0089 ? -0.0453 ? 4 'X-RAY DIFFRACTION' ? refined -8.2104 -49.3853 -1.5156 0.4030 ? 0.0462 ? 0.0411 ? 0.3858 ? -0.0048 ? 0.3617 ? 1.2320 ? -0.1852 ? 0.5622 ? 0.9210 ? 0.2241 ? 0.3791 ? -0.2013 ? -0.0556 ? 0.1341 ? 0.3115 ? 0.1991 ? 0.0723 ? -0.0133 ? -0.2255 ? -0.0532 ? 5 'X-RAY DIFFRACTION' ? refined -13.6722 -64.4999 -12.5702 0.5808 ? -0.0036 ? 0.1055 ? 0.6442 ? 0.0847 ? 0.6886 ? 0.3165 ? 0.8560 ? 0.0460 ? 2.3633 ? -0.2640 ? 0.2534 ? -0.1915 ? 0.0367 ? -0.6888 ? -0.2544 ? -0.1395 ? -1.5863 ? 0.3563 ? 1.1188 ? 0.0250 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid -188 through -118 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid -117 through -16 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid -15 through 104 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 105 through 204 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 205 through 227 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.21rc1_4924: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 8J25 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A -18 ? ? -127.58 -123.94 2 1 ASP A -10 ? ? -112.09 76.08 3 1 ASP A 19 ? ? -104.84 -167.86 4 1 ASP A 106 ? ? -83.91 -82.11 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS -48 ? CG ? A LYS 144 CG 2 1 Y 1 A LYS -48 ? CD ? A LYS 144 CD 3 1 Y 1 A LYS -48 ? CE ? A LYS 144 CE 4 1 Y 1 A LYS -48 ? NZ ? A LYS 144 NZ 5 1 Y 1 A LEU 225 ? CG ? A LEU 417 CG 6 1 Y 1 A LEU 225 ? CD1 ? A LEU 417 CD1 7 1 Y 1 A LEU 225 ? CD2 ? A LEU 417 CD2 8 1 Y 1 A LYS 226 ? CG ? A LYS 418 CG 9 1 Y 1 A LYS 226 ? CD ? A LYS 418 CD 10 1 Y 1 A LYS 226 ? CE ? A LYS 418 CE 11 1 Y 1 A LYS 226 ? NZ ? A LYS 418 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -191 ? A MET 1 2 1 Y 1 A GLY -190 ? A GLY 2 3 1 Y 1 A LYS -189 ? A LYS 3 4 1 Y 1 A LYS 183 ? A LYS 375 5 1 Y 1 A THR 184 ? A THR 376 6 1 Y 1 A ASN 185 ? A ASN 377 7 1 Y 1 A ASP 228 ? A ASP 420 8 1 Y 1 A ILE 229 ? A ILE 421 9 1 Y 1 A SER 230 ? A SER 422 10 1 Y 1 A ALA 231 ? A ALA 423 11 1 Y 1 A GLU 232 ? A GLU 424 12 1 Y 1 A ILE 233 ? A ILE 425 13 1 Y 1 A GLN 234 ? A GLN 426 14 1 Y 1 A GLN 235 ? A GLN 427 15 1 Y 1 A ARG 236 ? A ARG 428 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLC C1 C N S 88 GLC C2 C N R 89 GLC C3 C N S 90 GLC C4 C N S 91 GLC C5 C N R 92 GLC C6 C N N 93 GLC O1 O N N 94 GLC O2 O N N 95 GLC O3 O N N 96 GLC O4 O N N 97 GLC O5 O N N 98 GLC O6 O N N 99 GLC H1 H N N 100 GLC H2 H N N 101 GLC H3 H N N 102 GLC H4 H N N 103 GLC H5 H N N 104 GLC H61 H N N 105 GLC H62 H N N 106 GLC HO1 H N N 107 GLC HO2 H N N 108 GLC HO3 H N N 109 GLC HO4 H N N 110 GLC HO6 H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 PHE N N N N 274 PHE CA C N S 275 PHE C C N N 276 PHE O O N N 277 PHE CB C N N 278 PHE CG C Y N 279 PHE CD1 C Y N 280 PHE CD2 C Y N 281 PHE CE1 C Y N 282 PHE CE2 C Y N 283 PHE CZ C Y N 284 PHE OXT O N N 285 PHE H H N N 286 PHE H2 H N N 287 PHE HA H N N 288 PHE HB2 H N N 289 PHE HB3 H N N 290 PHE HD1 H N N 291 PHE HD2 H N N 292 PHE HE1 H N N 293 PHE HE2 H N N 294 PHE HZ H N N 295 PHE HXT H N N 296 PRO N N N N 297 PRO CA C N S 298 PRO C C N N 299 PRO O O N N 300 PRO CB C N N 301 PRO CG C N N 302 PRO CD C N N 303 PRO OXT O N N 304 PRO H H N N 305 PRO HA H N N 306 PRO HB2 H N N 307 PRO HB3 H N N 308 PRO HG2 H N N 309 PRO HG3 H N N 310 PRO HD2 H N N 311 PRO HD3 H N N 312 PRO HXT H N N 313 SER N N N N 314 SER CA C N S 315 SER C C N N 316 SER O O N N 317 SER CB C N N 318 SER OG O N N 319 SER OXT O N N 320 SER H H N N 321 SER H2 H N N 322 SER HA H N N 323 SER HB2 H N N 324 SER HB3 H N N 325 SER HG H N N 326 SER HXT H N N 327 THR N N N N 328 THR CA C N S 329 THR C C N N 330 THR O O N N 331 THR CB C N R 332 THR OG1 O N N 333 THR CG2 C N N 334 THR OXT O N N 335 THR H H N N 336 THR H2 H N N 337 THR HA H N N 338 THR HB H N N 339 THR HG1 H N N 340 THR HG21 H N N 341 THR HG22 H N N 342 THR HG23 H N N 343 THR HXT H N N 344 TRP N N N N 345 TRP CA C N S 346 TRP C C N N 347 TRP O O N N 348 TRP CB C N N 349 TRP CG C Y N 350 TRP CD1 C Y N 351 TRP CD2 C Y N 352 TRP NE1 N Y N 353 TRP CE2 C Y N 354 TRP CE3 C Y N 355 TRP CZ2 C Y N 356 TRP CZ3 C Y N 357 TRP CH2 C Y N 358 TRP OXT O N N 359 TRP H H N N 360 TRP H2 H N N 361 TRP HA H N N 362 TRP HB2 H N N 363 TRP HB3 H N N 364 TRP HD1 H N N 365 TRP HE1 H N N 366 TRP HE3 H N N 367 TRP HZ2 H N N 368 TRP HZ3 H N N 369 TRP HH2 H N N 370 TRP HXT H N N 371 TYR N N N N 372 TYR CA C N S 373 TYR C C N N 374 TYR O O N N 375 TYR CB C N N 376 TYR CG C Y N 377 TYR CD1 C Y N 378 TYR CD2 C Y N 379 TYR CE1 C Y N 380 TYR CE2 C Y N 381 TYR CZ C Y N 382 TYR OH O N N 383 TYR OXT O N N 384 TYR H H N N 385 TYR H2 H N N 386 TYR HA H N N 387 TYR HB2 H N N 388 TYR HB3 H N N 389 TYR HD1 H N N 390 TYR HD2 H N N 391 TYR HE1 H N N 392 TYR HE2 H N N 393 TYR HH H N N 394 TYR HXT H N N 395 VAL N N N N 396 VAL CA C N S 397 VAL C C N N 398 VAL O O N N 399 VAL CB C N N 400 VAL CG1 C N N 401 VAL CG2 C N N 402 VAL OXT O N N 403 VAL H H N N 404 VAL H2 H N N 405 VAL HA H N N 406 VAL HB H N N 407 VAL HG11 H N N 408 VAL HG12 H N N 409 VAL HG13 H N N 410 VAL HG21 H N N 411 VAL HG22 H N N 412 VAL HG23 H N N 413 VAL HXT H N N 414 ZN ZN ZN N N 415 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLC C1 C2 sing N N 83 GLC C1 O1 sing N N 84 GLC C1 O5 sing N N 85 GLC C1 H1 sing N N 86 GLC C2 C3 sing N N 87 GLC C2 O2 sing N N 88 GLC C2 H2 sing N N 89 GLC C3 C4 sing N N 90 GLC C3 O3 sing N N 91 GLC C3 H3 sing N N 92 GLC C4 C5 sing N N 93 GLC C4 O4 sing N N 94 GLC C4 H4 sing N N 95 GLC C5 C6 sing N N 96 GLC C5 O5 sing N N 97 GLC C5 H5 sing N N 98 GLC C6 O6 sing N N 99 GLC C6 H61 sing N N 100 GLC C6 H62 sing N N 101 GLC O1 HO1 sing N N 102 GLC O2 HO2 sing N N 103 GLC O3 HO3 sing N N 104 GLC O4 HO4 sing N N 105 GLC O6 HO6 sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 PHE N CA sing N N 261 PHE N H sing N N 262 PHE N H2 sing N N 263 PHE CA C sing N N 264 PHE CA CB sing N N 265 PHE CA HA sing N N 266 PHE C O doub N N 267 PHE C OXT sing N N 268 PHE CB CG sing N N 269 PHE CB HB2 sing N N 270 PHE CB HB3 sing N N 271 PHE CG CD1 doub Y N 272 PHE CG CD2 sing Y N 273 PHE CD1 CE1 sing Y N 274 PHE CD1 HD1 sing N N 275 PHE CD2 CE2 doub Y N 276 PHE CD2 HD2 sing N N 277 PHE CE1 CZ doub Y N 278 PHE CE1 HE1 sing N N 279 PHE CE2 CZ sing Y N 280 PHE CE2 HE2 sing N N 281 PHE CZ HZ sing N N 282 PHE OXT HXT sing N N 283 PRO N CA sing N N 284 PRO N CD sing N N 285 PRO N H sing N N 286 PRO CA C sing N N 287 PRO CA CB sing N N 288 PRO CA HA sing N N 289 PRO C O doub N N 290 PRO C OXT sing N N 291 PRO CB CG sing N N 292 PRO CB HB2 sing N N 293 PRO CB HB3 sing N N 294 PRO CG CD sing N N 295 PRO CG HG2 sing N N 296 PRO CG HG3 sing N N 297 PRO CD HD2 sing N N 298 PRO CD HD3 sing N N 299 PRO OXT HXT sing N N 300 SER N CA sing N N 301 SER N H sing N N 302 SER N H2 sing N N 303 SER CA C sing N N 304 SER CA CB sing N N 305 SER CA HA sing N N 306 SER C O doub N N 307 SER C OXT sing N N 308 SER CB OG sing N N 309 SER CB HB2 sing N N 310 SER CB HB3 sing N N 311 SER OG HG sing N N 312 SER OXT HXT sing N N 313 THR N CA sing N N 314 THR N H sing N N 315 THR N H2 sing N N 316 THR CA C sing N N 317 THR CA CB sing N N 318 THR CA HA sing N N 319 THR C O doub N N 320 THR C OXT sing N N 321 THR CB OG1 sing N N 322 THR CB CG2 sing N N 323 THR CB HB sing N N 324 THR OG1 HG1 sing N N 325 THR CG2 HG21 sing N N 326 THR CG2 HG22 sing N N 327 THR CG2 HG23 sing N N 328 THR OXT HXT sing N N 329 TRP N CA sing N N 330 TRP N H sing N N 331 TRP N H2 sing N N 332 TRP CA C sing N N 333 TRP CA CB sing N N 334 TRP CA HA sing N N 335 TRP C O doub N N 336 TRP C OXT sing N N 337 TRP CB CG sing N N 338 TRP CB HB2 sing N N 339 TRP CB HB3 sing N N 340 TRP CG CD1 doub Y N 341 TRP CG CD2 sing Y N 342 TRP CD1 NE1 sing Y N 343 TRP CD1 HD1 sing N N 344 TRP CD2 CE2 doub Y N 345 TRP CD2 CE3 sing Y N 346 TRP NE1 CE2 sing Y N 347 TRP NE1 HE1 sing N N 348 TRP CE2 CZ2 sing Y N 349 TRP CE3 CZ3 doub Y N 350 TRP CE3 HE3 sing N N 351 TRP CZ2 CH2 doub Y N 352 TRP CZ2 HZ2 sing N N 353 TRP CZ3 CH2 sing Y N 354 TRP CZ3 HZ3 sing N N 355 TRP CH2 HH2 sing N N 356 TRP OXT HXT sing N N 357 TYR N CA sing N N 358 TYR N H sing N N 359 TYR N H2 sing N N 360 TYR CA C sing N N 361 TYR CA CB sing N N 362 TYR CA HA sing N N 363 TYR C O doub N N 364 TYR C OXT sing N N 365 TYR CB CG sing N N 366 TYR CB HB2 sing N N 367 TYR CB HB3 sing N N 368 TYR CG CD1 doub Y N 369 TYR CG CD2 sing Y N 370 TYR CD1 CE1 sing Y N 371 TYR CD1 HD1 sing N N 372 TYR CD2 CE2 doub Y N 373 TYR CD2 HD2 sing N N 374 TYR CE1 CZ doub Y N 375 TYR CE1 HE1 sing N N 376 TYR CE2 CZ sing Y N 377 TYR CE2 HE2 sing N N 378 TYR CZ OH sing N N 379 TYR OH HH sing N N 380 TYR OXT HXT sing N N 381 VAL N CA sing N N 382 VAL N H sing N N 383 VAL N H2 sing N N 384 VAL CA C sing N N 385 VAL CA CB sing N N 386 VAL CA HA sing N N 387 VAL C O doub N N 388 VAL C OXT sing N N 389 VAL CB CG1 sing N N 390 VAL CB CG2 sing N N 391 VAL CB HB sing N N 392 VAL CG1 HG11 sing N N 393 VAL CG1 HG12 sing N N 394 VAL CG1 HG13 sing N N 395 VAL CG2 HG21 sing N N 396 VAL CG2 HG22 sing N N 397 VAL CG2 HG23 sing N N 398 VAL OXT HXT sing N N 399 # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 GLC 1 B GLC 1 B MAL 1611 n B 2 GLC 2 B GLC 2 B MAL 1611 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpa1-4DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1a_1-5]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-Glcp]{[(4+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 GLC 1 n 2 GLC 2 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1MG1 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #