HEADER DNA BINDING PROTEIN/DNA 26-APR-23 8J70 TITLE NATIVE SAND DOMAIN OF PROTEIN SP140 WITH DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR BODY PROTEIN SP140; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LYMPHOID-RESTRICTED HOMOLOG OF SP100,LYSP100,NUCLEAR COMPND 5 AUTOANTIGEN SP-140,SPECKLED 140 KDA; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*GP*GP*GP*CP*GP*GP*CP*CP*GP*CP*CP*CP*T)-3'); COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SP140, LYSP100; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR BODY PROTEIN SP140 SAND, DNA BINDING PROTEIN/DNA, DNA BINDING KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.T.LI,W.Q.LIU REVDAT 1 01-MAY-24 8J70 0 JRNL AUTH H.T.LI,W.Q.LIU JRNL TITL MOLECULAR BASIS FOR SPECKLED PROTEIN SP140 BIVALENT JRNL TITL 2 RECOGNITION OF HISTONE H3 AND DNA. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.17.1_3660: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 25505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4200 - 3.8400 0.99 2823 160 0.1715 0.1984 REMARK 3 2 3.8400 - 3.0500 1.00 2726 158 0.1893 0.2324 REMARK 3 3 3.0500 - 2.6700 1.00 2730 129 0.2204 0.2423 REMARK 3 4 2.6700 - 2.4200 1.00 2697 128 0.2490 0.2746 REMARK 3 5 2.4200 - 2.2500 0.99 2662 124 0.2460 0.3074 REMARK 3 6 2.2500 - 2.1200 1.00 2668 167 0.2127 0.2887 REMARK 3 7 2.1200 - 2.0100 1.00 2666 134 0.2172 0.2568 REMARK 3 8 2.0100 - 1.9200 1.00 2650 142 0.2496 0.2644 REMARK 3 9 1.9200 - 1.8500 0.98 2587 154 0.2611 0.3308 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.090 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1979 REMARK 3 ANGLE : 0.877 2774 REMARK 3 CHIRALITY : 0.053 295 REMARK 3 PLANARITY : 0.008 268 REMARK 3 DIHEDRAL : 27.859 775 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 582 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5118 -7.1982 1.9306 REMARK 3 T TENSOR REMARK 3 T11: 0.4057 T22: 0.6117 REMARK 3 T33: 0.4209 T12: 0.1285 REMARK 3 T13: -0.0443 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 2.3508 L22: 2.7554 REMARK 3 L33: 4.6800 L12: -1.9827 REMARK 3 L13: -1.4410 L23: -0.8101 REMARK 3 S TENSOR REMARK 3 S11: 0.1039 S12: 0.6705 S13: -0.4133 REMARK 3 S21: -0.5587 S22: 0.1145 S23: 1.2396 REMARK 3 S31: -0.3871 S32: -0.6583 S33: -0.1201 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 589 THROUGH 618 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.9021 -9.2659 12.2580 REMARK 3 T TENSOR REMARK 3 T11: 0.2835 T22: 0.2227 REMARK 3 T33: 0.2989 T12: -0.0196 REMARK 3 T13: 0.0122 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.9568 L22: 1.0502 REMARK 3 L33: 2.5472 L12: -0.5326 REMARK 3 L13: -1.0913 L23: -0.0868 REMARK 3 S TENSOR REMARK 3 S11: 0.2198 S12: 0.0811 S13: -0.0261 REMARK 3 S21: -0.0295 S22: -0.1740 S23: -0.0615 REMARK 3 S31: -0.1562 S32: 0.1848 S33: -0.0361 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 619 THROUGH 624 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.9885 -12.7048 19.5744 REMARK 3 T TENSOR REMARK 3 T11: 0.2763 T22: 0.3283 REMARK 3 T33: 0.3514 T12: 0.0202 REMARK 3 T13: -0.0527 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 3.0076 L22: 1.9657 REMARK 3 L33: 6.1196 L12: -0.4428 REMARK 3 L13: -4.2111 L23: 1.2607 REMARK 3 S TENSOR REMARK 3 S11: -0.3158 S12: -0.9220 S13: -0.0971 REMARK 3 S21: -0.0064 S22: 0.1063 S23: -0.3086 REMARK 3 S31: 0.0583 S32: 0.7828 S33: 0.0477 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 625 THROUGH 650 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1513 -16.2509 6.6645 REMARK 3 T TENSOR REMARK 3 T11: 0.1984 T22: 0.2555 REMARK 3 T33: 0.2611 T12: 0.0686 REMARK 3 T13: 0.0133 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 3.1051 L22: 1.7449 REMARK 3 L33: 1.9955 L12: 0.2011 REMARK 3 L13: -1.0873 L23: -0.1344 REMARK 3 S TENSOR REMARK 3 S11: 0.1512 S12: 0.3526 S13: -0.1202 REMARK 3 S21: -0.1056 S22: -0.1339 S23: 0.0791 REMARK 3 S31: 0.3031 S32: 0.3301 S33: -0.0175 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 651 THROUGH 656 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9340 -8.5716 -2.1192 REMARK 3 T TENSOR REMARK 3 T11: 0.5221 T22: 0.4814 REMARK 3 T33: 0.3411 T12: 0.0895 REMARK 3 T13: 0.0472 T23: 0.1034 REMARK 3 L TENSOR REMARK 3 L11: 4.4852 L22: 5.7373 REMARK 3 L33: 8.6876 L12: 0.8863 REMARK 3 L13: -0.0372 L23: -2.6738 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: 0.9892 S13: 0.3651 REMARK 3 S21: -1.2217 S22: -0.3621 S23: -0.3241 REMARK 3 S31: 0.2555 S32: 0.0401 S33: 0.3951 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 657 THROUGH 666 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7231 -2.9705 2.7857 REMARK 3 T TENSOR REMARK 3 T11: 0.4106 T22: 0.5828 REMARK 3 T33: 0.5124 T12: -0.0457 REMARK 3 T13: 0.0734 T23: 0.2108 REMARK 3 L TENSOR REMARK 3 L11: 1.1519 L22: 2.6095 REMARK 3 L33: 3.9442 L12: -0.6651 REMARK 3 L13: -0.3984 L23: 2.0795 REMARK 3 S TENSOR REMARK 3 S11: 0.1307 S12: 0.6906 S13: 0.6690 REMARK 3 S21: -0.1618 S22: -0.4911 S23: -0.6605 REMARK 3 S31: -1.1310 S32: 0.4468 S33: 0.1474 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 582 THROUGH 596 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7572 -7.0598 -22.6137 REMARK 3 T TENSOR REMARK 3 T11: 0.7754 T22: 0.3771 REMARK 3 T33: 0.4240 T12: 0.1307 REMARK 3 T13: 0.0951 T23: 0.0653 REMARK 3 L TENSOR REMARK 3 L11: 3.8177 L22: 1.6166 REMARK 3 L33: 2.2566 L12: -2.1838 REMARK 3 L13: 0.4106 L23: -0.3873 REMARK 3 S TENSOR REMARK 3 S11: 0.1334 S12: -0.4728 S13: 0.0656 REMARK 3 S21: -0.1261 S22: 0.2252 S23: 0.2207 REMARK 3 S31: -1.0644 S32: -0.3620 S33: -0.2475 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 597 THROUGH 608 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.3348 -15.0765 -27.2632 REMARK 3 T TENSOR REMARK 3 T11: 0.5891 T22: 0.4459 REMARK 3 T33: 0.3086 T12: 0.1923 REMARK 3 T13: -0.0748 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 2.1350 L22: 4.1517 REMARK 3 L33: 4.0803 L12: -1.0878 REMARK 3 L13: -0.0126 L23: -0.0255 REMARK 3 S TENSOR REMARK 3 S11: 0.2700 S12: 0.7472 S13: -0.1510 REMARK 3 S21: -1.4014 S22: -0.3458 S23: 0.2081 REMARK 3 S31: -0.6218 S32: -0.1262 S33: 0.0738 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 609 THROUGH 639 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.5106 -20.2756 -23.3265 REMARK 3 T TENSOR REMARK 3 T11: 0.4498 T22: 0.4704 REMARK 3 T33: 0.3317 T12: 0.1691 REMARK 3 T13: 0.0894 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 2.4514 L22: 2.3386 REMARK 3 L33: 2.6326 L12: -0.4134 REMARK 3 L13: 0.2069 L23: -0.3063 REMARK 3 S TENSOR REMARK 3 S11: 0.1614 S12: 0.3631 S13: -0.0968 REMARK 3 S21: -0.6617 S22: -0.1172 S23: -0.2997 REMARK 3 S31: -0.0058 S32: 0.4859 S33: -0.0357 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 640 THROUGH 668 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.9276 -16.1942 -15.3279 REMARK 3 T TENSOR REMARK 3 T11: 0.4621 T22: 0.3354 REMARK 3 T33: 0.3895 T12: 0.1172 REMARK 3 T13: 0.0208 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 2.1398 L22: 2.0690 REMARK 3 L33: 3.6934 L12: -1.1337 REMARK 3 L13: 0.8457 L23: -0.4549 REMARK 3 S TENSOR REMARK 3 S11: 0.2188 S12: -0.2932 S13: 0.1168 REMARK 3 S21: -0.3585 S22: -0.1352 S23: 0.5994 REMARK 3 S31: -0.0452 S32: -0.2837 S33: -0.0703 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1847 -21.4628 -1.7193 REMARK 3 T TENSOR REMARK 3 T11: 0.2754 T22: 0.4546 REMARK 3 T33: 0.3250 T12: 0.0748 REMARK 3 T13: -0.0568 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 2.0869 L22: 4.5293 REMARK 3 L33: 3.7118 L12: -1.2906 REMARK 3 L13: -1.3499 L23: -0.3217 REMARK 3 S TENSOR REMARK 3 S11: 0.3016 S12: -0.1373 S13: 0.1382 REMARK 3 S21: -0.0143 S22: -0.1045 S23: -0.4821 REMARK 3 S31: 0.1212 S32: 0.2729 S33: -0.1529 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 12 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.9134 -21.8315 -3.3212 REMARK 3 T TENSOR REMARK 3 T11: 0.2785 T22: 0.4466 REMARK 3 T33: 0.3663 T12: 0.0732 REMARK 3 T13: 0.0353 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 4.1839 L22: 2.4543 REMARK 3 L33: 3.9299 L12: -1.0032 REMARK 3 L13: 1.1261 L23: -0.7747 REMARK 3 S TENSOR REMARK 3 S11: 0.3846 S12: -0.3949 S13: -0.0251 REMARK 3 S21: -0.1842 S22: -0.2177 S23: -0.3713 REMARK 3 S31: 0.1218 S32: 0.0056 S33: -0.1198 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8J70 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 09-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1300037261. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-20 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25564 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% V/V TACSIMATE PH 6.0, 22% W/V PEG REMARK 280 3350, 10 MM FECL3, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.33950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 32.33950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 38.31450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.53550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 38.31450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.53550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 32.33950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 38.31450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.53550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.33950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 38.31450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.53550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SE SEY A 701 LIES ON A SPECIAL POSITION. REMARK 375 C SEY A 701 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 575 REMARK 465 PRO A 576 REMARK 465 LEU A 577 REMARK 465 GLY A 578 REMARK 465 SER A 579 REMARK 465 ASP A 580 REMARK 465 GLU A 581 REMARK 465 ARG A 667 REMARK 465 TYR A 668 REMARK 465 ARG A 669 REMARK 465 LYS A 670 REMARK 465 LYS A 671 REMARK 465 LYS A 672 REMARK 465 ARG A 673 REMARK 465 GLY B 575 REMARK 465 PRO B 576 REMARK 465 LEU B 577 REMARK 465 GLY B 578 REMARK 465 SER B 579 REMARK 465 ASP B 580 REMARK 465 GLU B 581 REMARK 465 ARG B 669 REMARK 465 LYS B 670 REMARK 465 LYS B 671 REMARK 465 LYS B 672 REMARK 465 ARG B 673 REMARK 465 DT C 13 REMARK 465 DT D 13 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC D 4 O3' DC D 4 C3' -0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 639 85.89 -164.36 REMARK 500 ASN B 639 88.36 -167.96 REMARK 500 REMARK 500 REMARK: NULL DBREF 8J70 A 580 673 UNP Q13342 SP140_HUMAN 580 673 DBREF 8J70 B 580 673 UNP Q13342 SP140_HUMAN 580 673 DBREF 8J70 C 1 13 PDB 8J70 8J70 1 13 DBREF 8J70 D 1 13 PDB 8J70 8J70 1 13 SEQADV 8J70 GLY A 575 UNP Q13342 EXPRESSION TAG SEQADV 8J70 PRO A 576 UNP Q13342 EXPRESSION TAG SEQADV 8J70 LEU A 577 UNP Q13342 EXPRESSION TAG SEQADV 8J70 GLY A 578 UNP Q13342 EXPRESSION TAG SEQADV 8J70 SER A 579 UNP Q13342 EXPRESSION TAG SEQADV 8J70 GLY B 575 UNP Q13342 EXPRESSION TAG SEQADV 8J70 PRO B 576 UNP Q13342 EXPRESSION TAG SEQADV 8J70 LEU B 577 UNP Q13342 EXPRESSION TAG SEQADV 8J70 GLY B 578 UNP Q13342 EXPRESSION TAG SEQADV 8J70 SER B 579 UNP Q13342 EXPRESSION TAG SEQRES 1 A 99 GLY PRO LEU GLY SER ASP GLU THR VAL ASP PHE LYS ALA SEQRES 2 A 99 PRO LEU LEU PRO VAL THR CYS GLY GLY VAL LYS GLY ILE SEQRES 3 A 99 LEU HIS LYS LYS LYS LEU GLN GLN GLY ILE LEU VAL LYS SEQRES 4 A 99 CYS ILE GLN THR GLU ASP GLY LYS TRP PHE THR PRO THR SEQRES 5 A 99 GLU PHE GLU ILE LYS GLY GLY HIS ALA ARG SER LYS ASN SEQRES 6 A 99 TRP ARG LEU SER VAL ARG CYS GLY GLY TRP PRO LEU ARG SEQRES 7 A 99 TRP LEU MET GLU ASN GLY PHE LEU PRO ASP PRO PRO ARG SEQRES 8 A 99 ILE ARG TYR ARG LYS LYS LYS ARG SEQRES 1 B 99 GLY PRO LEU GLY SER ASP GLU THR VAL ASP PHE LYS ALA SEQRES 2 B 99 PRO LEU LEU PRO VAL THR CYS GLY GLY VAL LYS GLY ILE SEQRES 3 B 99 LEU HIS LYS LYS LYS LEU GLN GLN GLY ILE LEU VAL LYS SEQRES 4 B 99 CYS ILE GLN THR GLU ASP GLY LYS TRP PHE THR PRO THR SEQRES 5 B 99 GLU PHE GLU ILE LYS GLY GLY HIS ALA ARG SER LYS ASN SEQRES 6 B 99 TRP ARG LEU SER VAL ARG CYS GLY GLY TRP PRO LEU ARG SEQRES 7 B 99 TRP LEU MET GLU ASN GLY PHE LEU PRO ASP PRO PRO ARG SEQRES 8 B 99 ILE ARG TYR ARG LYS LYS LYS ARG SEQRES 1 C 13 DG DG DG DC DG DG DC DC DG DC DC DC DT SEQRES 1 D 13 DG DG DG DC DG DG DC DC DG DC DC DC DT HET SEY A 701 8 HETNAM SEY SELENOUREA FORMUL 5 SEY C H4 N2 SE FORMUL 6 HOH *104(H2 O) HELIX 1 AA1 LYS A 603 GLN A 607 1 5 HELIX 2 AA2 THR A 624 GLY A 632 1 9 HELIX 3 AA3 HIS A 634 LYS A 638 5 5 HELIX 4 AA4 ASN A 639 VAL A 644 1 6 HELIX 5 AA5 LEU A 651 ASN A 657 1 7 HELIX 6 AA6 LYS B 603 GLN B 607 1 5 HELIX 7 AA7 THR B 624 GLY B 632 1 9 HELIX 8 AA8 HIS B 634 LYS B 638 5 5 HELIX 9 AA9 ASN B 639 VAL B 644 1 6 HELIX 10 AB1 LEU B 651 ASN B 657 1 7 SHEET 1 AA1 4 LEU A 589 CYS A 594 0 SHEET 2 AA1 4 VAL A 597 HIS A 602 -1 O LEU A 601 N LEU A 590 SHEET 3 AA1 4 ILE A 615 GLN A 616 -1 O GLN A 616 N ILE A 600 SHEET 4 AA1 4 TRP A 622 PHE A 623 -1 O PHE A 623 N ILE A 615 SHEET 1 AA2 2 ARG A 645 CYS A 646 0 SHEET 2 AA2 2 TRP A 649 PRO A 650 -1 O TRP A 649 N CYS A 646 SHEET 1 AA3 4 LEU B 589 CYS B 594 0 SHEET 2 AA3 4 VAL B 597 HIS B 602 -1 O LEU B 601 N LEU B 590 SHEET 3 AA3 4 ILE B 615 GLN B 616 -1 O GLN B 616 N ILE B 600 SHEET 4 AA3 4 TRP B 622 PHE B 623 -1 O PHE B 623 N ILE B 615 SHEET 1 AA4 2 ARG B 645 CYS B 646 0 SHEET 2 AA4 2 TRP B 649 PRO B 650 -1 O TRP B 649 N CYS B 646 CRYST1 76.629 119.071 64.679 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013050 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015461 0.00000