data_8JAP # _entry.id 8JAP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.408 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8JAP pdb_00008jap 10.2210/pdb8jap/pdb WWPDB D_1300037535 ? ? EMDB EMD-36121 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2024-12-18 ? 2 'Structure model' 1 1 2025-12-31 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8JAP _pdbx_database_status.recvd_initial_deposition_date 2023-05-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details . _pdbx_database_related.db_id EMD-36121 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email yangyh@nanoctr.cn _pdbx_contact_author.name_first 'Yuhe Renee' _pdbx_contact_author.name_last Yang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2321-4653 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nan, X.Y.' 1 0009-0000-3525-7154 'Li, Y.J.' 2 0009-0007-3725-8135 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 10578 _citation.page_last 10578 _citation.title 'Exploring distinct modes of inter-spike cross-linking for enhanced neutralization by SARS-CoV-2 antibodies.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-54746-5 _citation.pdbx_database_id_PubMed 39632831 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nan, X.' 1 ? primary 'Li, Y.' 2 0009-0007-3725-8135 primary 'Zhang, R.' 3 0000-0003-0024-389X primary 'Wang, R.' 4 0000-0002-8040-7913 primary 'Lv, N.' 5 ? primary 'Li, J.' 6 ? primary 'Chen, Y.' 7 0000-0002-4404-5302 primary 'Zhou, B.' 8 ? primary 'Wang, Y.' 9 ? primary 'Wang, Z.' 10 ? primary 'Zhu, J.' 11 ? primary 'Chen, J.' 12 ? primary 'Li, J.' 13 ? primary 'Chen, W.' 14 ? primary 'Zhang, Q.' 15 ? primary 'Shi, X.' 16 ? primary 'Zhao, C.' 17 ? primary 'Chen, C.' 18 0000-0002-6027-0315 primary 'Liu, Z.' 19 0000-0003-4242-033X primary 'Zhao, Y.' 20 0000-0002-9586-9360 primary 'Liu, D.' 21 ? primary 'Wang, X.' 22 0000-0003-3136-8070 primary 'Yan, L.T.' 23 0000-0002-6090-3039 primary 'Li, T.' 24 0000-0002-7050-5675 primary 'Zhang, L.' 25 0000-0003-4931-509X primary 'Yang, Y.R.' 26 0000-0003-2321-4653 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike glycoprotein' 61089.957 1 ? ? ? ? 2 polymer man 'H chain of W328-6H2 Fab region' 11654.112 1 ? ? ? ? 3 polymer man 'L chain of W328-6H2 Fab region' 12276.692 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'S glycoprotein,E2,Peplomer protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSF VIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN ; ;MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSF VIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN ; A ? 2 'polypeptide(L)' no no ;QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLK ADDTAVYYCARGHVLEWFQGTLVTVSS ; ;QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLK ADDTAVYYCARGHVLEWFQGTLVTVSS ; H ? 3 'polypeptide(L)' no no ;DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKI SRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK ; ;DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKI SRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK ; L ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 PHE n 1 3 VAL n 1 4 PHE n 1 5 LEU n 1 6 VAL n 1 7 LEU n 1 8 LEU n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 SER n 1 13 SER n 1 14 GLN n 1 15 CYS n 1 16 VAL n 1 17 ASN n 1 18 LEU n 1 19 THR n 1 20 THR n 1 21 ARG n 1 22 THR n 1 23 GLN n 1 24 LEU n 1 25 PRO n 1 26 PRO n 1 27 ALA n 1 28 TYR n 1 29 THR n 1 30 ASN n 1 31 SER n 1 32 PHE n 1 33 THR n 1 34 ARG n 1 35 GLY n 1 36 VAL n 1 37 TYR n 1 38 TYR n 1 39 PRO n 1 40 ASP n 1 41 LYS n 1 42 VAL n 1 43 PHE n 1 44 ARG n 1 45 SER n 1 46 SER n 1 47 VAL n 1 48 LEU n 1 49 HIS n 1 50 SER n 1 51 THR n 1 52 GLN n 1 53 ASP n 1 54 LEU n 1 55 PHE n 1 56 LEU n 1 57 PRO n 1 58 PHE n 1 59 PHE n 1 60 SER n 1 61 ASN n 1 62 VAL n 1 63 THR n 1 64 TRP n 1 65 PHE n 1 66 HIS n 1 67 ALA n 1 68 ILE n 1 69 HIS n 1 70 VAL n 1 71 SER n 1 72 GLY n 1 73 THR n 1 74 ASN n 1 75 GLY n 1 76 THR n 1 77 LYS n 1 78 ARG n 1 79 PHE n 1 80 ASP n 1 81 ASN n 1 82 PRO n 1 83 VAL n 1 84 LEU n 1 85 PRO n 1 86 PHE n 1 87 ASN n 1 88 ASP n 1 89 GLY n 1 90 VAL n 1 91 TYR n 1 92 PHE n 1 93 ALA n 1 94 SER n 1 95 THR n 1 96 GLU n 1 97 LYS n 1 98 SER n 1 99 ASN n 1 100 ILE n 1 101 ILE n 1 102 ARG n 1 103 GLY n 1 104 TRP n 1 105 ILE n 1 106 PHE n 1 107 GLY n 1 108 THR n 1 109 THR n 1 110 LEU n 1 111 ASP n 1 112 SER n 1 113 LYS n 1 114 THR n 1 115 GLN n 1 116 SER n 1 117 LEU n 1 118 LEU n 1 119 ILE n 1 120 VAL n 1 121 ASN n 1 122 ASN n 1 123 ALA n 1 124 THR n 1 125 ASN n 1 126 VAL n 1 127 VAL n 1 128 ILE n 1 129 LYS n 1 130 VAL n 1 131 CYS n 1 132 GLU n 1 133 PHE n 1 134 GLN n 1 135 PHE n 1 136 CYS n 1 137 ASN n 1 138 ASP n 1 139 PRO n 1 140 PHE n 1 141 LEU n 1 142 GLY n 1 143 VAL n 1 144 TYR n 1 145 TYR n 1 146 HIS n 1 147 LYS n 1 148 ASN n 1 149 ASN n 1 150 LYS n 1 151 SER n 1 152 TRP n 1 153 MET n 1 154 GLU n 1 155 SER n 1 156 GLU n 1 157 PHE n 1 158 ARG n 1 159 VAL n 1 160 TYR n 1 161 SER n 1 162 SER n 1 163 ALA n 1 164 ASN n 1 165 ASN n 1 166 CYS n 1 167 THR n 1 168 PHE n 1 169 GLU n 1 170 TYR n 1 171 VAL n 1 172 SER n 1 173 GLN n 1 174 PRO n 1 175 PHE n 1 176 LEU n 1 177 MET n 1 178 ASP n 1 179 LEU n 1 180 GLU n 1 181 GLY n 1 182 LYS n 1 183 GLN n 1 184 GLY n 1 185 ASN n 1 186 PHE n 1 187 LYS n 1 188 ASN n 1 189 LEU n 1 190 ARG n 1 191 GLU n 1 192 PHE n 1 193 VAL n 1 194 PHE n 1 195 LYS n 1 196 ASN n 1 197 ILE n 1 198 ASP n 1 199 GLY n 1 200 TYR n 1 201 PHE n 1 202 LYS n 1 203 ILE n 1 204 TYR n 1 205 SER n 1 206 LYS n 1 207 HIS n 1 208 THR n 1 209 PRO n 1 210 ILE n 1 211 ASN n 1 212 LEU n 1 213 VAL n 1 214 ARG n 1 215 ASP n 1 216 LEU n 1 217 PRO n 1 218 GLN n 1 219 GLY n 1 220 PHE n 1 221 SER n 1 222 ALA n 1 223 LEU n 1 224 GLU n 1 225 PRO n 1 226 LEU n 1 227 VAL n 1 228 ASP n 1 229 LEU n 1 230 PRO n 1 231 ILE n 1 232 GLY n 1 233 ILE n 1 234 ASN n 1 235 ILE n 1 236 THR n 1 237 ARG n 1 238 PHE n 1 239 GLN n 1 240 THR n 1 241 LEU n 1 242 LEU n 1 243 ALA n 1 244 LEU n 1 245 HIS n 1 246 ARG n 1 247 SER n 1 248 TYR n 1 249 LEU n 1 250 THR n 1 251 PRO n 1 252 GLY n 1 253 ASP n 1 254 SER n 1 255 SER n 1 256 SER n 1 257 GLY n 1 258 TRP n 1 259 THR n 1 260 ALA n 1 261 GLY n 1 262 ALA n 1 263 ALA n 1 264 ALA n 1 265 TYR n 1 266 TYR n 1 267 VAL n 1 268 GLY n 1 269 TYR n 1 270 LEU n 1 271 GLN n 1 272 PRO n 1 273 ARG n 1 274 THR n 1 275 PHE n 1 276 LEU n 1 277 LEU n 1 278 LYS n 1 279 TYR n 1 280 ASN n 1 281 GLU n 1 282 ASN n 1 283 GLY n 1 284 THR n 1 285 ILE n 1 286 THR n 1 287 ASP n 1 288 ALA n 1 289 VAL n 1 290 ASP n 1 291 CYS n 1 292 ALA n 1 293 LEU n 1 294 ASP n 1 295 PRO n 1 296 LEU n 1 297 SER n 1 298 GLU n 1 299 THR n 1 300 LYS n 1 301 CYS n 1 302 THR n 1 303 LEU n 1 304 LYS n 1 305 SER n 1 306 PHE n 1 307 THR n 1 308 VAL n 1 309 GLU n 1 310 LYS n 1 311 GLY n 1 312 ILE n 1 313 TYR n 1 314 GLN n 1 315 THR n 1 316 SER n 1 317 ASN n 1 318 PHE n 1 319 ARG n 1 320 VAL n 1 321 GLN n 1 322 PRO n 1 323 THR n 1 324 GLU n 1 325 SER n 1 326 ILE n 1 327 VAL n 1 328 ARG n 1 329 PHE n 1 330 PRO n 1 331 ASN n 1 332 ILE n 1 333 THR n 1 334 ASN n 1 335 LEU n 1 336 CYS n 1 337 PRO n 1 338 PHE n 1 339 GLY n 1 340 GLU n 1 341 VAL n 1 342 PHE n 1 343 ASN n 1 344 ALA n 1 345 THR n 1 346 ARG n 1 347 PHE n 1 348 ALA n 1 349 SER n 1 350 VAL n 1 351 TYR n 1 352 ALA n 1 353 TRP n 1 354 ASN n 1 355 ARG n 1 356 LYS n 1 357 ARG n 1 358 ILE n 1 359 SER n 1 360 ASN n 1 361 CYS n 1 362 VAL n 1 363 ALA n 1 364 ASP n 1 365 TYR n 1 366 SER n 1 367 VAL n 1 368 LEU n 1 369 TYR n 1 370 ASN n 1 371 SER n 1 372 ALA n 1 373 SER n 1 374 PHE n 1 375 SER n 1 376 THR n 1 377 PHE n 1 378 LYS n 1 379 CYS n 1 380 TYR n 1 381 GLY n 1 382 VAL n 1 383 SER n 1 384 PRO n 1 385 THR n 1 386 LYS n 1 387 LEU n 1 388 ASN n 1 389 ASP n 1 390 LEU n 1 391 CYS n 1 392 PHE n 1 393 THR n 1 394 ASN n 1 395 VAL n 1 396 TYR n 1 397 ALA n 1 398 ASP n 1 399 SER n 1 400 PHE n 1 401 VAL n 1 402 ILE n 1 403 ARG n 1 404 GLY n 1 405 ASP n 1 406 GLU n 1 407 VAL n 1 408 ARG n 1 409 GLN n 1 410 ILE n 1 411 ALA n 1 412 PRO n 1 413 GLY n 1 414 GLN n 1 415 THR n 1 416 GLY n 1 417 LYS n 1 418 ILE n 1 419 ALA n 1 420 ASP n 1 421 TYR n 1 422 ASN n 1 423 TYR n 1 424 LYS n 1 425 LEU n 1 426 PRO n 1 427 ASP n 1 428 ASP n 1 429 PHE n 1 430 THR n 1 431 GLY n 1 432 CYS n 1 433 VAL n 1 434 ILE n 1 435 ALA n 1 436 TRP n 1 437 ASN n 1 438 SER n 1 439 ASN n 1 440 ASN n 1 441 LEU n 1 442 ASP n 1 443 SER n 1 444 LYS n 1 445 VAL n 1 446 GLY n 1 447 GLY n 1 448 ASN n 1 449 TYR n 1 450 ASN n 1 451 TYR n 1 452 LEU n 1 453 TYR n 1 454 ARG n 1 455 LEU n 1 456 PHE n 1 457 ARG n 1 458 LYS n 1 459 SER n 1 460 ASN n 1 461 LEU n 1 462 LYS n 1 463 PRO n 1 464 PHE n 1 465 GLU n 1 466 ARG n 1 467 ASP n 1 468 ILE n 1 469 SER n 1 470 THR n 1 471 GLU n 1 472 ILE n 1 473 TYR n 1 474 GLN n 1 475 ALA n 1 476 GLY n 1 477 SER n 1 478 THR n 1 479 PRO n 1 480 CYS n 1 481 ASN n 1 482 GLY n 1 483 VAL n 1 484 GLU n 1 485 GLY n 1 486 PHE n 1 487 ASN n 1 488 CYS n 1 489 TYR n 1 490 PHE n 1 491 PRO n 1 492 LEU n 1 493 GLN n 1 494 SER n 1 495 TYR n 1 496 GLY n 1 497 PHE n 1 498 GLN n 1 499 PRO n 1 500 THR n 1 501 ASN n 1 502 GLY n 1 503 VAL n 1 504 GLY n 1 505 TYR n 1 506 GLN n 1 507 PRO n 1 508 TYR n 1 509 ARG n 1 510 VAL n 1 511 VAL n 1 512 VAL n 1 513 LEU n 1 514 SER n 1 515 PHE n 1 516 GLU n 1 517 LEU n 1 518 LEU n 1 519 HIS n 1 520 ALA n 1 521 PRO n 1 522 ALA n 1 523 THR n 1 524 VAL n 1 525 CYS n 1 526 GLY n 1 527 PRO n 1 528 LYS n 1 529 LYS n 1 530 SER n 1 531 THR n 1 532 ASN n 1 533 LEU n 1 534 VAL n 1 535 LYS n 1 536 ASN n 1 537 LYS n 1 538 CYS n 1 539 VAL n 1 540 ASN n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 SER n 2 10 GLU n 2 11 LEU n 2 12 LYS n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 THR n 2 20 VAL n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 SER n 2 29 PHE n 2 30 PRO n 2 31 THR n 2 32 HIS n 2 33 ALA n 2 34 MET n 2 35 ASN n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 GLN n 2 40 ALA n 2 41 PRO n 2 42 GLY n 2 43 GLN n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 MET n 2 49 GLY n 2 50 TRP n 2 51 ILE n 2 52 PRO n 2 53 THR n 2 54 TYR n 2 55 ALA n 2 56 GLY n 2 57 PHE n 2 58 THR n 2 59 GLY n 2 60 ARG n 2 61 PHE n 2 62 VAL n 2 63 PHE n 2 64 SER n 2 65 LEU n 2 66 ASP n 2 67 THR n 2 68 SER n 2 69 VAL n 2 70 SER n 2 71 THR n 2 72 ALA n 2 73 TYR n 2 74 LEU n 2 75 GLN n 2 76 ILE n 2 77 SER n 2 78 SER n 2 79 LEU n 2 80 LYS n 2 81 ALA n 2 82 ASP n 2 83 ASP n 2 84 THR n 2 85 ALA n 2 86 VAL n 2 87 TYR n 2 88 TYR n 2 89 CYS n 2 90 ALA n 2 91 ARG n 2 92 GLY n 2 93 HIS n 2 94 VAL n 2 95 LEU n 2 96 GLU n 2 97 TRP n 2 98 PHE n 2 99 GLN n 2 100 GLY n 2 101 THR n 2 102 LEU n 2 103 VAL n 2 104 THR n 2 105 VAL n 2 106 SER n 2 107 SER n 3 1 ASP n 3 2 VAL n 3 3 VAL n 3 4 MET n 3 5 THR n 3 6 GLN n 3 7 SER n 3 8 PRO n 3 9 LEU n 3 10 SER n 3 11 LEU n 3 12 SER n 3 13 VAL n 3 14 THR n 3 15 PRO n 3 16 GLY n 3 17 GLN n 3 18 PRO n 3 19 ALA n 3 20 SER n 3 21 ILE n 3 22 SER n 3 23 CYS n 3 24 LYS n 3 25 SER n 3 26 SER n 3 27 GLN n 3 28 THR n 3 29 LEU n 3 30 LEU n 3 31 HIS n 3 32 SER n 3 33 ASP n 3 34 GLY n 3 35 GLN n 3 36 THR n 3 37 SER n 3 38 PHE n 3 39 TYR n 3 40 TRP n 3 41 TYR n 3 42 LEU n 3 43 GLN n 3 44 LYS n 3 45 PRO n 3 46 GLY n 3 47 GLN n 3 48 SER n 3 49 PRO n 3 50 GLN n 3 51 LEU n 3 52 LEU n 3 53 ILE n 3 54 TYR n 3 55 ASP n 3 56 ILE n 3 57 SER n 3 58 SER n 3 59 ARG n 3 60 PHE n 3 61 SER n 3 62 GLY n 3 63 VAL n 3 64 PRO n 3 65 ASP n 3 66 ARG n 3 67 PHE n 3 68 SER n 3 69 GLY n 3 70 SER n 3 71 GLY n 3 72 SER n 3 73 GLY n 3 74 THR n 3 75 ASP n 3 76 PHE n 3 77 THR n 3 78 LEU n 3 79 LYS n 3 80 ILE n 3 81 SER n 3 82 ARG n 3 83 VAL n 3 84 GLU n 3 85 ALA n 3 86 GLU n 3 87 ASP n 3 88 VAL n 3 89 GLY n 3 90 VAL n 3 91 TYR n 3 92 TYR n 3 93 CYS n 3 94 MET n 3 95 GLN n 3 96 GLY n 3 97 THR n 3 98 GLN n 3 99 PHE n 3 100 PRO n 3 101 TRP n 3 102 THR n 3 103 PHE n 3 104 GLY n 3 105 GLN n 3 106 GLY n 3 107 THR n 3 108 LYS n 3 109 VAL n 3 110 GLU n 3 111 ILE n 3 112 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 540 ? ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 107 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample 'Biological sequence' 1 112 ? ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -317 ? ? ? A . n A 1 2 PHE 2 -316 ? ? ? A . n A 1 3 VAL 3 -315 ? ? ? A . n A 1 4 PHE 4 -314 ? ? ? A . n A 1 5 LEU 5 -313 ? ? ? A . n A 1 6 VAL 6 -312 ? ? ? A . n A 1 7 LEU 7 -311 ? ? ? A . n A 1 8 LEU 8 -310 ? ? ? A . n A 1 9 PRO 9 -309 ? ? ? A . n A 1 10 LEU 10 -308 ? ? ? A . n A 1 11 VAL 11 -307 ? ? ? A . n A 1 12 SER 12 -306 ? ? ? A . n A 1 13 SER 13 -305 ? ? ? A . n A 1 14 GLN 14 -304 ? ? ? A . n A 1 15 CYS 15 -303 ? ? ? A . n A 1 16 VAL 16 -302 ? ? ? A . n A 1 17 ASN 17 -301 ? ? ? A . n A 1 18 LEU 18 -300 ? ? ? A . n A 1 19 THR 19 -299 ? ? ? A . n A 1 20 THR 20 -298 ? ? ? A . n A 1 21 ARG 21 -297 ? ? ? A . n A 1 22 THR 22 -296 ? ? ? A . n A 1 23 GLN 23 -295 ? ? ? A . n A 1 24 LEU 24 -294 ? ? ? A . n A 1 25 PRO 25 -293 ? ? ? A . n A 1 26 PRO 26 -292 ? ? ? A . n A 1 27 ALA 27 -291 ? ? ? A . n A 1 28 TYR 28 -290 ? ? ? A . n A 1 29 THR 29 -289 ? ? ? A . n A 1 30 ASN 30 -288 ? ? ? A . n A 1 31 SER 31 -287 ? ? ? A . n A 1 32 PHE 32 -286 ? ? ? A . n A 1 33 THR 33 -285 ? ? ? A . n A 1 34 ARG 34 -284 ? ? ? A . n A 1 35 GLY 35 -283 ? ? ? A . n A 1 36 VAL 36 -282 ? ? ? A . n A 1 37 TYR 37 -281 ? ? ? A . n A 1 38 TYR 38 -280 ? ? ? A . n A 1 39 PRO 39 -279 ? ? ? A . n A 1 40 ASP 40 -278 ? ? ? A . n A 1 41 LYS 41 -277 ? ? ? A . n A 1 42 VAL 42 -276 ? ? ? A . n A 1 43 PHE 43 -275 ? ? ? A . n A 1 44 ARG 44 -274 ? ? ? A . n A 1 45 SER 45 -273 ? ? ? A . n A 1 46 SER 46 -272 ? ? ? A . n A 1 47 VAL 47 -271 ? ? ? A . n A 1 48 LEU 48 -270 ? ? ? A . n A 1 49 HIS 49 -269 ? ? ? A . n A 1 50 SER 50 -268 ? ? ? A . n A 1 51 THR 51 -267 ? ? ? A . n A 1 52 GLN 52 -266 ? ? ? A . n A 1 53 ASP 53 -265 ? ? ? A . n A 1 54 LEU 54 -264 ? ? ? A . n A 1 55 PHE 55 -263 ? ? ? A . n A 1 56 LEU 56 -262 ? ? ? A . n A 1 57 PRO 57 -261 ? ? ? A . n A 1 58 PHE 58 -260 ? ? ? A . n A 1 59 PHE 59 -259 ? ? ? A . n A 1 60 SER 60 -258 ? ? ? A . n A 1 61 ASN 61 -257 ? ? ? A . n A 1 62 VAL 62 -256 ? ? ? A . n A 1 63 THR 63 -255 ? ? ? A . n A 1 64 TRP 64 -254 ? ? ? A . n A 1 65 PHE 65 -253 ? ? ? A . n A 1 66 HIS 66 -252 ? ? ? A . n A 1 67 ALA 67 -251 ? ? ? A . n A 1 68 ILE 68 -250 ? ? ? A . n A 1 69 HIS 69 -249 ? ? ? A . n A 1 70 VAL 70 -248 ? ? ? A . n A 1 71 SER 71 -247 ? ? ? A . n A 1 72 GLY 72 -246 ? ? ? A . n A 1 73 THR 73 -245 ? ? ? A . n A 1 74 ASN 74 -244 ? ? ? A . n A 1 75 GLY 75 -243 ? ? ? A . n A 1 76 THR 76 -242 ? ? ? A . n A 1 77 LYS 77 -241 ? ? ? A . n A 1 78 ARG 78 -240 ? ? ? A . n A 1 79 PHE 79 -239 ? ? ? A . n A 1 80 ASP 80 -238 ? ? ? A . n A 1 81 ASN 81 -237 ? ? ? A . n A 1 82 PRO 82 -236 ? ? ? A . n A 1 83 VAL 83 -235 ? ? ? A . n A 1 84 LEU 84 -234 ? ? ? A . n A 1 85 PRO 85 -233 ? ? ? A . n A 1 86 PHE 86 -232 ? ? ? A . n A 1 87 ASN 87 -231 ? ? ? A . n A 1 88 ASP 88 -230 ? ? ? A . n A 1 89 GLY 89 -229 ? ? ? A . n A 1 90 VAL 90 -228 ? ? ? A . n A 1 91 TYR 91 -227 ? ? ? A . n A 1 92 PHE 92 -226 ? ? ? A . n A 1 93 ALA 93 -225 ? ? ? A . n A 1 94 SER 94 -224 ? ? ? A . n A 1 95 THR 95 -223 ? ? ? A . n A 1 96 GLU 96 -222 ? ? ? A . n A 1 97 LYS 97 -221 ? ? ? A . n A 1 98 SER 98 -220 ? ? ? A . n A 1 99 ASN 99 -219 ? ? ? A . n A 1 100 ILE 100 -218 ? ? ? A . n A 1 101 ILE 101 -217 ? ? ? A . n A 1 102 ARG 102 -216 ? ? ? A . n A 1 103 GLY 103 -215 ? ? ? A . n A 1 104 TRP 104 -214 ? ? ? A . n A 1 105 ILE 105 -213 ? ? ? A . n A 1 106 PHE 106 -212 ? ? ? A . n A 1 107 GLY 107 -211 ? ? ? A . n A 1 108 THR 108 -210 ? ? ? A . n A 1 109 THR 109 -209 ? ? ? A . n A 1 110 LEU 110 -208 ? ? ? A . n A 1 111 ASP 111 -207 ? ? ? A . n A 1 112 SER 112 -206 ? ? ? A . n A 1 113 LYS 113 -205 ? ? ? A . n A 1 114 THR 114 -204 ? ? ? A . n A 1 115 GLN 115 -203 ? ? ? A . n A 1 116 SER 116 -202 ? ? ? A . n A 1 117 LEU 117 -201 ? ? ? A . n A 1 118 LEU 118 -200 ? ? ? A . n A 1 119 ILE 119 -199 ? ? ? A . n A 1 120 VAL 120 -198 ? ? ? A . n A 1 121 ASN 121 -197 ? ? ? A . n A 1 122 ASN 122 -196 ? ? ? A . n A 1 123 ALA 123 -195 ? ? ? A . n A 1 124 THR 124 -194 ? ? ? A . n A 1 125 ASN 125 -193 ? ? ? A . n A 1 126 VAL 126 -192 ? ? ? A . n A 1 127 VAL 127 -191 ? ? ? A . n A 1 128 ILE 128 -190 ? ? ? A . n A 1 129 LYS 129 -189 ? ? ? A . n A 1 130 VAL 130 -188 ? ? ? A . n A 1 131 CYS 131 -187 ? ? ? A . n A 1 132 GLU 132 -186 ? ? ? A . n A 1 133 PHE 133 -185 ? ? ? A . n A 1 134 GLN 134 -184 ? ? ? A . n A 1 135 PHE 135 -183 ? ? ? A . n A 1 136 CYS 136 -182 ? ? ? A . n A 1 137 ASN 137 -181 ? ? ? A . n A 1 138 ASP 138 -180 ? ? ? A . n A 1 139 PRO 139 -179 ? ? ? A . n A 1 140 PHE 140 -178 ? ? ? A . n A 1 141 LEU 141 -177 ? ? ? A . n A 1 142 GLY 142 -176 ? ? ? A . n A 1 143 VAL 143 -175 ? ? ? A . n A 1 144 TYR 144 -174 ? ? ? A . n A 1 145 TYR 145 -173 ? ? ? A . n A 1 146 HIS 146 -172 ? ? ? A . n A 1 147 LYS 147 -171 ? ? ? A . n A 1 148 ASN 148 -170 ? ? ? A . n A 1 149 ASN 149 -169 ? ? ? A . n A 1 150 LYS 150 -168 ? ? ? A . n A 1 151 SER 151 -167 ? ? ? A . n A 1 152 TRP 152 -166 ? ? ? A . n A 1 153 MET 153 -165 ? ? ? A . n A 1 154 GLU 154 -164 ? ? ? A . n A 1 155 SER 155 -163 ? ? ? A . n A 1 156 GLU 156 -162 ? ? ? A . n A 1 157 PHE 157 -161 ? ? ? A . n A 1 158 ARG 158 -160 ? ? ? A . n A 1 159 VAL 159 -159 ? ? ? A . n A 1 160 TYR 160 -158 ? ? ? A . n A 1 161 SER 161 -157 ? ? ? A . n A 1 162 SER 162 -156 ? ? ? A . n A 1 163 ALA 163 -155 ? ? ? A . n A 1 164 ASN 164 -154 ? ? ? A . n A 1 165 ASN 165 -153 ? ? ? A . n A 1 166 CYS 166 -152 ? ? ? A . n A 1 167 THR 167 -151 ? ? ? A . n A 1 168 PHE 168 -150 ? ? ? A . n A 1 169 GLU 169 -149 ? ? ? A . n A 1 170 TYR 170 -148 ? ? ? A . n A 1 171 VAL 171 -147 ? ? ? A . n A 1 172 SER 172 -146 ? ? ? A . n A 1 173 GLN 173 -145 ? ? ? A . n A 1 174 PRO 174 -144 ? ? ? A . n A 1 175 PHE 175 -143 ? ? ? A . n A 1 176 LEU 176 -142 ? ? ? A . n A 1 177 MET 177 -141 ? ? ? A . n A 1 178 ASP 178 -140 ? ? ? A . n A 1 179 LEU 179 -139 ? ? ? A . n A 1 180 GLU 180 -138 ? ? ? A . n A 1 181 GLY 181 -137 ? ? ? A . n A 1 182 LYS 182 -136 ? ? ? A . n A 1 183 GLN 183 -135 ? ? ? A . n A 1 184 GLY 184 -134 ? ? ? A . n A 1 185 ASN 185 -133 ? ? ? A . n A 1 186 PHE 186 -132 ? ? ? A . n A 1 187 LYS 187 -131 ? ? ? A . n A 1 188 ASN 188 -130 ? ? ? A . n A 1 189 LEU 189 -129 ? ? ? A . n A 1 190 ARG 190 -128 ? ? ? A . n A 1 191 GLU 191 -127 ? ? ? A . n A 1 192 PHE 192 -126 ? ? ? A . n A 1 193 VAL 193 -125 ? ? ? A . n A 1 194 PHE 194 -124 ? ? ? A . n A 1 195 LYS 195 -123 ? ? ? A . n A 1 196 ASN 196 -122 ? ? ? A . n A 1 197 ILE 197 -121 ? ? ? A . n A 1 198 ASP 198 -120 ? ? ? A . n A 1 199 GLY 199 -119 ? ? ? A . n A 1 200 TYR 200 -118 ? ? ? A . n A 1 201 PHE 201 -117 ? ? ? A . n A 1 202 LYS 202 -116 ? ? ? A . n A 1 203 ILE 203 -115 ? ? ? A . n A 1 204 TYR 204 -114 ? ? ? A . n A 1 205 SER 205 -113 ? ? ? A . n A 1 206 LYS 206 -112 ? ? ? A . n A 1 207 HIS 207 -111 ? ? ? A . n A 1 208 THR 208 -110 ? ? ? A . n A 1 209 PRO 209 -109 ? ? ? A . n A 1 210 ILE 210 -108 ? ? ? A . n A 1 211 ASN 211 -107 ? ? ? A . n A 1 212 LEU 212 -106 ? ? ? A . n A 1 213 VAL 213 -105 ? ? ? A . n A 1 214 ARG 214 -104 ? ? ? A . n A 1 215 ASP 215 -103 ? ? ? A . n A 1 216 LEU 216 -102 ? ? ? A . n A 1 217 PRO 217 -101 ? ? ? A . n A 1 218 GLN 218 -100 ? ? ? A . n A 1 219 GLY 219 -99 ? ? ? A . n A 1 220 PHE 220 -98 ? ? ? A . n A 1 221 SER 221 -97 ? ? ? A . n A 1 222 ALA 222 -96 ? ? ? A . n A 1 223 LEU 223 -95 ? ? ? A . n A 1 224 GLU 224 -94 ? ? ? A . n A 1 225 PRO 225 -93 ? ? ? A . n A 1 226 LEU 226 -92 ? ? ? A . n A 1 227 VAL 227 -91 ? ? ? A . n A 1 228 ASP 228 -90 ? ? ? A . n A 1 229 LEU 229 -89 ? ? ? A . n A 1 230 PRO 230 -88 ? ? ? A . n A 1 231 ILE 231 -87 ? ? ? A . n A 1 232 GLY 232 -86 ? ? ? A . n A 1 233 ILE 233 -85 ? ? ? A . n A 1 234 ASN 234 -84 ? ? ? A . n A 1 235 ILE 235 -83 ? ? ? A . n A 1 236 THR 236 -82 ? ? ? A . n A 1 237 ARG 237 -81 ? ? ? A . n A 1 238 PHE 238 -80 ? ? ? A . n A 1 239 GLN 239 -79 ? ? ? A . n A 1 240 THR 240 -78 ? ? ? A . n A 1 241 LEU 241 -77 ? ? ? A . n A 1 242 LEU 242 -76 ? ? ? A . n A 1 243 ALA 243 -75 ? ? ? A . n A 1 244 LEU 244 -74 ? ? ? A . n A 1 245 HIS 245 -73 ? ? ? A . n A 1 246 ARG 246 -72 ? ? ? A . n A 1 247 SER 247 -71 ? ? ? A . n A 1 248 TYR 248 -70 ? ? ? A . n A 1 249 LEU 249 -69 ? ? ? A . n A 1 250 THR 250 -68 ? ? ? A . n A 1 251 PRO 251 -67 ? ? ? A . n A 1 252 GLY 252 -66 ? ? ? A . n A 1 253 ASP 253 -65 ? ? ? A . n A 1 254 SER 254 -64 ? ? ? A . n A 1 255 SER 255 -63 ? ? ? A . n A 1 256 SER 256 -62 ? ? ? A . n A 1 257 GLY 257 -61 ? ? ? A . n A 1 258 TRP 258 -60 ? ? ? A . n A 1 259 THR 259 -59 ? ? ? A . n A 1 260 ALA 260 -58 ? ? ? A . n A 1 261 GLY 261 -57 ? ? ? A . n A 1 262 ALA 262 -56 ? ? ? A . n A 1 263 ALA 263 -55 ? ? ? A . n A 1 264 ALA 264 -54 ? ? ? A . n A 1 265 TYR 265 -53 ? ? ? A . n A 1 266 TYR 266 -52 ? ? ? A . n A 1 267 VAL 267 -51 ? ? ? A . n A 1 268 GLY 268 -50 ? ? ? A . n A 1 269 TYR 269 -49 ? ? ? A . n A 1 270 LEU 270 -48 ? ? ? A . n A 1 271 GLN 271 -47 ? ? ? A . n A 1 272 PRO 272 -46 ? ? ? A . n A 1 273 ARG 273 -45 ? ? ? A . n A 1 274 THR 274 -44 ? ? ? A . n A 1 275 PHE 275 -43 ? ? ? A . n A 1 276 LEU 276 -42 ? ? ? A . n A 1 277 LEU 277 -41 ? ? ? A . n A 1 278 LYS 278 -40 ? ? ? A . n A 1 279 TYR 279 -39 ? ? ? A . n A 1 280 ASN 280 -38 ? ? ? A . n A 1 281 GLU 281 -37 ? ? ? A . n A 1 282 ASN 282 -36 ? ? ? A . n A 1 283 GLY 283 -35 ? ? ? A . n A 1 284 THR 284 -34 ? ? ? A . n A 1 285 ILE 285 -33 ? ? ? A . n A 1 286 THR 286 -32 ? ? ? A . n A 1 287 ASP 287 -31 ? ? ? A . n A 1 288 ALA 288 -30 ? ? ? A . n A 1 289 VAL 289 -29 ? ? ? A . n A 1 290 ASP 290 -28 ? ? ? A . n A 1 291 CYS 291 -27 ? ? ? A . n A 1 292 ALA 292 -26 ? ? ? A . n A 1 293 LEU 293 -25 ? ? ? A . n A 1 294 ASP 294 -24 ? ? ? A . n A 1 295 PRO 295 -23 ? ? ? A . n A 1 296 LEU 296 -22 ? ? ? A . n A 1 297 SER 297 -21 ? ? ? A . n A 1 298 GLU 298 -20 ? ? ? A . n A 1 299 THR 299 -19 ? ? ? A . n A 1 300 LYS 300 -18 ? ? ? A . n A 1 301 CYS 301 -17 ? ? ? A . n A 1 302 THR 302 -16 ? ? ? A . n A 1 303 LEU 303 -15 ? ? ? A . n A 1 304 LYS 304 -14 ? ? ? A . n A 1 305 SER 305 -13 ? ? ? A . n A 1 306 PHE 306 -12 ? ? ? A . n A 1 307 THR 307 -11 ? ? ? A . n A 1 308 VAL 308 -10 ? ? ? A . n A 1 309 GLU 309 -9 ? ? ? A . n A 1 310 LYS 310 -8 ? ? ? A . n A 1 311 GLY 311 -7 ? ? ? A . n A 1 312 ILE 312 -6 ? ? ? A . n A 1 313 TYR 313 -5 ? ? ? A . n A 1 314 GLN 314 -4 ? ? ? A . n A 1 315 THR 315 -3 ? ? ? A . n A 1 316 SER 316 -2 ? ? ? A . n A 1 317 ASN 317 -1 ? ? ? A . n A 1 318 PHE 318 0 ? ? ? A . n A 1 319 ARG 319 1 1 ARG ARG A . n A 1 320 VAL 320 2 2 VAL VAL A . n A 1 321 GLN 321 3 3 GLN GLN A . n A 1 322 PRO 322 4 4 PRO PRO A . n A 1 323 THR 323 5 5 THR THR A . n A 1 324 GLU 324 6 6 GLU GLU A . n A 1 325 SER 325 7 7 SER SER A . n A 1 326 ILE 326 8 8 ILE ILE A . n A 1 327 VAL 327 9 9 VAL VAL A . n A 1 328 ARG 328 10 10 ARG ARG A . n A 1 329 PHE 329 11 11 PHE PHE A . n A 1 330 PRO 330 12 12 PRO PRO A . n A 1 331 ASN 331 13 13 ASN ASN A . n A 1 332 ILE 332 14 14 ILE ILE A . n A 1 333 THR 333 15 15 THR THR A . n A 1 334 ASN 334 16 16 ASN ASN A . n A 1 335 LEU 335 17 17 LEU LEU A . n A 1 336 CYS 336 18 18 CYS CYS A . n A 1 337 PRO 337 19 19 PRO PRO A . n A 1 338 PHE 338 20 20 PHE PHE A . n A 1 339 GLY 339 21 21 GLY GLY A . n A 1 340 GLU 340 22 22 GLU GLU A . n A 1 341 VAL 341 23 23 VAL VAL A . n A 1 342 PHE 342 24 24 PHE PHE A . n A 1 343 ASN 343 25 25 ASN ASN A . n A 1 344 ALA 344 26 26 ALA ALA A . n A 1 345 THR 345 27 27 THR THR A . n A 1 346 ARG 346 28 28 ARG ARG A . n A 1 347 PHE 347 29 29 PHE PHE A . n A 1 348 ALA 348 30 30 ALA ALA A . n A 1 349 SER 349 31 31 SER SER A . n A 1 350 VAL 350 32 32 VAL VAL A . n A 1 351 TYR 351 33 33 TYR TYR A . n A 1 352 ALA 352 34 34 ALA ALA A . n A 1 353 TRP 353 35 35 TRP TRP A . n A 1 354 ASN 354 36 36 ASN ASN A . n A 1 355 ARG 355 37 37 ARG ARG A . n A 1 356 LYS 356 38 38 LYS LYS A . n A 1 357 ARG 357 39 39 ARG ARG A . n A 1 358 ILE 358 40 40 ILE ILE A . n A 1 359 SER 359 41 41 SER SER A . n A 1 360 ASN 360 42 42 ASN ASN A . n A 1 361 CYS 361 43 43 CYS CYS A . n A 1 362 VAL 362 44 44 VAL VAL A . n A 1 363 ALA 363 45 45 ALA ALA A . n A 1 364 ASP 364 46 46 ASP ASP A . n A 1 365 TYR 365 47 47 TYR TYR A . n A 1 366 SER 366 48 48 SER SER A . n A 1 367 VAL 367 49 49 VAL VAL A . n A 1 368 LEU 368 50 50 LEU LEU A . n A 1 369 TYR 369 51 51 TYR TYR A . n A 1 370 ASN 370 52 52 ASN ASN A . n A 1 371 SER 371 53 53 SER SER A . n A 1 372 ALA 372 54 54 ALA ALA A . n A 1 373 SER 373 55 55 SER SER A . n A 1 374 PHE 374 56 56 PHE PHE A . n A 1 375 SER 375 57 57 SER SER A . n A 1 376 THR 376 58 58 THR THR A . n A 1 377 PHE 377 59 59 PHE PHE A . n A 1 378 LYS 378 60 60 LYS LYS A . n A 1 379 CYS 379 61 61 CYS CYS A . n A 1 380 TYR 380 62 62 TYR TYR A . n A 1 381 GLY 381 63 63 GLY GLY A . n A 1 382 VAL 382 64 64 VAL VAL A . n A 1 383 SER 383 65 65 SER SER A . n A 1 384 PRO 384 66 66 PRO PRO A . n A 1 385 THR 385 67 67 THR THR A . n A 1 386 LYS 386 68 68 LYS LYS A . n A 1 387 LEU 387 69 69 LEU LEU A . n A 1 388 ASN 388 70 70 ASN ASN A . n A 1 389 ASP 389 71 71 ASP ASP A . n A 1 390 LEU 390 72 72 LEU LEU A . n A 1 391 CYS 391 73 73 CYS CYS A . n A 1 392 PHE 392 74 74 PHE PHE A . n A 1 393 THR 393 75 75 THR THR A . n A 1 394 ASN 394 76 76 ASN ASN A . n A 1 395 VAL 395 77 77 VAL VAL A . n A 1 396 TYR 396 78 78 TYR TYR A . n A 1 397 ALA 397 79 79 ALA ALA A . n A 1 398 ASP 398 80 80 ASP ASP A . n A 1 399 SER 399 81 81 SER SER A . n A 1 400 PHE 400 82 82 PHE PHE A . n A 1 401 VAL 401 83 83 VAL VAL A . n A 1 402 ILE 402 84 84 ILE ILE A . n A 1 403 ARG 403 85 85 ARG ARG A . n A 1 404 GLY 404 86 86 GLY GLY A . n A 1 405 ASP 405 87 87 ASP ASP A . n A 1 406 GLU 406 88 88 GLU GLU A . n A 1 407 VAL 407 89 89 VAL VAL A . n A 1 408 ARG 408 90 90 ARG ARG A . n A 1 409 GLN 409 91 91 GLN GLN A . n A 1 410 ILE 410 92 92 ILE ILE A . n A 1 411 ALA 411 93 93 ALA ALA A . n A 1 412 PRO 412 94 94 PRO PRO A . n A 1 413 GLY 413 95 95 GLY GLY A . n A 1 414 GLN 414 96 96 GLN GLN A . n A 1 415 THR 415 97 97 THR THR A . n A 1 416 GLY 416 98 98 GLY GLY A . n A 1 417 LYS 417 99 99 LYS LYS A . n A 1 418 ILE 418 100 100 ILE ILE A . n A 1 419 ALA 419 101 101 ALA ALA A . n A 1 420 ASP 420 102 102 ASP ASP A . n A 1 421 TYR 421 103 103 TYR TYR A . n A 1 422 ASN 422 104 104 ASN ASN A . n A 1 423 TYR 423 105 105 TYR TYR A . n A 1 424 LYS 424 106 106 LYS LYS A . n A 1 425 LEU 425 107 107 LEU LEU A . n A 1 426 PRO 426 108 108 PRO PRO A . n A 1 427 ASP 427 109 109 ASP ASP A . n A 1 428 ASP 428 110 110 ASP ASP A . n A 1 429 PHE 429 111 111 PHE PHE A . n A 1 430 THR 430 112 112 THR THR A . n A 1 431 GLY 431 113 113 GLY GLY A . n A 1 432 CYS 432 114 114 CYS CYS A . n A 1 433 VAL 433 115 115 VAL VAL A . n A 1 434 ILE 434 116 116 ILE ILE A . n A 1 435 ALA 435 117 117 ALA ALA A . n A 1 436 TRP 436 118 118 TRP TRP A . n A 1 437 ASN 437 119 119 ASN ASN A . n A 1 438 SER 438 120 120 SER SER A . n A 1 439 ASN 439 121 121 ASN ASN A . n A 1 440 ASN 440 122 122 ASN ASN A . n A 1 441 LEU 441 123 123 LEU LEU A . n A 1 442 ASP 442 124 124 ASP ASP A . n A 1 443 SER 443 125 125 SER SER A . n A 1 444 LYS 444 126 126 LYS LYS A . n A 1 445 VAL 445 127 127 VAL VAL A . n A 1 446 GLY 446 128 128 GLY GLY A . n A 1 447 GLY 447 129 129 GLY GLY A . n A 1 448 ASN 448 130 130 ASN ASN A . n A 1 449 TYR 449 131 131 TYR TYR A . n A 1 450 ASN 450 132 132 ASN ASN A . n A 1 451 TYR 451 133 133 TYR TYR A . n A 1 452 LEU 452 134 134 LEU LEU A . n A 1 453 TYR 453 135 135 TYR TYR A . n A 1 454 ARG 454 136 136 ARG ARG A . n A 1 455 LEU 455 137 137 LEU LEU A . n A 1 456 PHE 456 138 138 PHE PHE A . n A 1 457 ARG 457 139 139 ARG ARG A . n A 1 458 LYS 458 140 140 LYS LYS A . n A 1 459 SER 459 141 141 SER SER A . n A 1 460 ASN 460 142 142 ASN ASN A . n A 1 461 LEU 461 143 143 LEU LEU A . n A 1 462 LYS 462 144 144 LYS LYS A . n A 1 463 PRO 463 145 145 PRO PRO A . n A 1 464 PHE 464 146 146 PHE PHE A . n A 1 465 GLU 465 147 147 GLU GLU A . n A 1 466 ARG 466 148 148 ARG ARG A . n A 1 467 ASP 467 149 149 ASP ASP A . n A 1 468 ILE 468 150 150 ILE ILE A . n A 1 469 SER 469 151 151 SER SER A . n A 1 470 THR 470 152 152 THR THR A . n A 1 471 GLU 471 153 153 GLU GLU A . n A 1 472 ILE 472 154 154 ILE ILE A . n A 1 473 TYR 473 155 155 TYR TYR A . n A 1 474 GLN 474 156 156 GLN GLN A . n A 1 475 ALA 475 157 157 ALA ALA A . n A 1 476 GLY 476 158 158 GLY GLY A . n A 1 477 SER 477 159 159 SER SER A . n A 1 478 THR 478 160 160 THR THR A . n A 1 479 PRO 479 161 161 PRO PRO A . n A 1 480 CYS 480 162 162 CYS CYS A . n A 1 481 ASN 481 163 163 ASN ASN A . n A 1 482 GLY 482 164 164 GLY GLY A . n A 1 483 VAL 483 165 165 VAL VAL A . n A 1 484 GLU 484 166 166 GLU GLU A . n A 1 485 GLY 485 167 ? ? ? A . n A 1 486 PHE 486 168 168 PHE PHE A . n A 1 487 ASN 487 169 169 ASN ASN A . n A 1 488 CYS 488 170 170 CYS CYS A . n A 1 489 TYR 489 171 171 TYR TYR A . n A 1 490 PHE 490 172 172 PHE PHE A . n A 1 491 PRO 491 173 173 PRO PRO A . n A 1 492 LEU 492 174 174 LEU LEU A . n A 1 493 GLN 493 175 175 GLN GLN A . n A 1 494 SER 494 176 176 SER SER A . n A 1 495 TYR 495 177 177 TYR TYR A . n A 1 496 GLY 496 178 178 GLY GLY A . n A 1 497 PHE 497 179 179 PHE PHE A . n A 1 498 GLN 498 180 180 GLN GLN A . n A 1 499 PRO 499 181 181 PRO PRO A . n A 1 500 THR 500 182 182 THR THR A . n A 1 501 ASN 501 183 ? ? ? A . n A 1 502 GLY 502 184 ? ? ? A . n A 1 503 VAL 503 185 185 VAL VAL A . n A 1 504 GLY 504 186 186 GLY GLY A . n A 1 505 TYR 505 187 187 TYR TYR A . n A 1 506 GLN 506 188 188 GLN GLN A . n A 1 507 PRO 507 189 189 PRO PRO A . n A 1 508 TYR 508 190 190 TYR TYR A . n A 1 509 ARG 509 191 191 ARG ARG A . n A 1 510 VAL 510 192 192 VAL VAL A . n A 1 511 VAL 511 193 193 VAL VAL A . n A 1 512 VAL 512 194 194 VAL VAL A . n A 1 513 LEU 513 195 195 LEU LEU A . n A 1 514 SER 514 196 196 SER SER A . n A 1 515 PHE 515 197 197 PHE PHE A . n A 1 516 GLU 516 198 198 GLU GLU A . n A 1 517 LEU 517 199 199 LEU LEU A . n A 1 518 LEU 518 200 200 LEU LEU A . n A 1 519 HIS 519 201 201 HIS HIS A . n A 1 520 ALA 520 202 202 ALA ALA A . n A 1 521 PRO 521 203 203 PRO PRO A . n A 1 522 ALA 522 204 204 ALA ALA A . n A 1 523 THR 523 205 205 THR THR A . n A 1 524 VAL 524 206 206 VAL VAL A . n A 1 525 CYS 525 207 207 CYS CYS A . n A 1 526 GLY 526 208 208 GLY GLY A . n A 1 527 PRO 527 209 209 PRO PRO A . n A 1 528 LYS 528 210 210 LYS LYS A . n A 1 529 LYS 529 211 211 LYS LYS A . n A 1 530 SER 530 212 212 SER SER A . n A 1 531 THR 531 213 213 THR THR A . n A 1 532 ASN 532 214 214 ASN ASN A . n A 1 533 LEU 533 215 215 LEU LEU A . n A 1 534 VAL 534 216 216 VAL VAL A . n A 1 535 LYS 535 217 217 LYS LYS A . n A 1 536 ASN 536 218 218 ASN ASN A . n A 1 537 LYS 537 219 219 LYS LYS A . n A 1 538 CYS 538 220 220 CYS CYS A . n A 1 539 VAL 539 221 221 VAL VAL A . n A 1 540 ASN 540 222 222 ASN ASN A . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 SER 9 9 9 SER SER H . n B 2 10 GLU 10 10 10 GLU GLU H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 LYS 12 12 12 LYS LYS H . n B 2 13 LYS 13 13 13 LYS LYS H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 THR 19 19 19 THR THR H . n B 2 20 VAL 20 20 20 VAL VAL H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 SER 28 28 28 SER SER H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 PRO 30 30 30 PRO PRO H . n B 2 31 THR 31 31 31 THR THR H . n B 2 32 HIS 32 32 32 HIS HIS H . n B 2 33 ALA 33 33 33 ALA ALA H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 ASN 35 35 35 ASN ASN H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 ALA 40 40 40 ALA ALA H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 GLN 43 43 43 GLN GLN H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 MET 48 48 48 MET MET H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 TRP 50 50 50 TRP TRP H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 PRO 52 52 52 PRO PRO H . n B 2 53 THR 53 53 53 THR THR H . n B 2 54 TYR 54 54 54 TYR TYR H . n B 2 55 ALA 55 55 55 ALA ALA H . n B 2 56 GLY 56 56 56 GLY GLY H . n B 2 57 PHE 57 57 57 PHE PHE H . n B 2 58 THR 58 58 58 THR THR H . n B 2 59 GLY 59 59 59 GLY GLY H . n B 2 60 ARG 60 60 60 ARG ARG H . n B 2 61 PHE 61 61 61 PHE PHE H . n B 2 62 VAL 62 62 62 VAL VAL H . n B 2 63 PHE 63 63 63 PHE PHE H . n B 2 64 SER 64 64 64 SER SER H . n B 2 65 LEU 65 65 65 LEU LEU H . n B 2 66 ASP 66 66 66 ASP ASP H . n B 2 67 THR 67 67 67 THR THR H . n B 2 68 SER 68 68 68 SER SER H . n B 2 69 VAL 69 69 69 VAL VAL H . n B 2 70 SER 70 70 70 SER SER H . n B 2 71 THR 71 71 71 THR THR H . n B 2 72 ALA 72 72 72 ALA ALA H . n B 2 73 TYR 73 73 73 TYR TYR H . n B 2 74 LEU 74 74 ? ? ? H . n B 2 75 GLN 75 75 75 GLN GLN H . n B 2 76 ILE 76 76 76 ILE ILE H . n B 2 77 SER 77 77 77 SER SER H . n B 2 78 SER 78 78 78 SER SER H . n B 2 79 LEU 79 79 79 LEU LEU H . n B 2 80 LYS 80 80 80 LYS LYS H . n B 2 81 ALA 81 81 81 ALA ALA H . n B 2 82 ASP 82 82 82 ASP ASP H . n B 2 83 ASP 83 83 83 ASP ASP H . n B 2 84 THR 84 84 84 THR THR H . n B 2 85 ALA 85 85 85 ALA ALA H . n B 2 86 VAL 86 86 86 VAL VAL H . n B 2 87 TYR 87 87 87 TYR TYR H . n B 2 88 TYR 88 88 88 TYR TYR H . n B 2 89 CYS 89 89 89 CYS CYS H . n B 2 90 ALA 90 90 90 ALA ALA H . n B 2 91 ARG 91 91 91 ARG ARG H . n B 2 92 GLY 92 92 92 GLY GLY H . n B 2 93 HIS 93 93 93 HIS HIS H . n B 2 94 VAL 94 94 94 VAL VAL H . n B 2 95 LEU 95 95 95 LEU LEU H . n B 2 96 GLU 96 96 96 GLU GLU H . n B 2 97 TRP 97 97 97 TRP TRP H . n B 2 98 PHE 98 98 98 PHE PHE H . n B 2 99 GLN 99 99 99 GLN GLN H . n B 2 100 GLY 100 100 100 GLY GLY H . n B 2 101 THR 101 101 ? ? ? H . n B 2 102 LEU 102 102 102 LEU LEU H . n B 2 103 VAL 103 103 103 VAL VAL H . n B 2 104 THR 104 104 104 THR THR H . n B 2 105 VAL 105 105 105 VAL VAL H . n B 2 106 SER 106 106 106 SER SER H . n B 2 107 SER 107 107 107 SER SER H . n C 3 1 ASP 1 0 ? ? ? L . n C 3 2 VAL 2 1 1 VAL VAL L . n C 3 3 VAL 3 2 2 VAL VAL L . n C 3 4 MET 4 3 3 MET MET L . n C 3 5 THR 5 4 4 THR THR L . n C 3 6 GLN 6 5 5 GLN GLN L . n C 3 7 SER 7 6 6 SER SER L . n C 3 8 PRO 8 7 7 PRO PRO L . n C 3 9 LEU 9 8 8 LEU LEU L . n C 3 10 SER 10 9 9 SER SER L . n C 3 11 LEU 11 10 10 LEU LEU L . n C 3 12 SER 12 11 11 SER SER L . n C 3 13 VAL 13 12 12 VAL VAL L . n C 3 14 THR 14 13 13 THR THR L . n C 3 15 PRO 15 14 14 PRO PRO L . n C 3 16 GLY 16 15 15 GLY GLY L . n C 3 17 GLN 17 16 16 GLN GLN L . n C 3 18 PRO 18 17 17 PRO PRO L . n C 3 19 ALA 19 18 18 ALA ALA L . n C 3 20 SER 20 19 19 SER SER L . n C 3 21 ILE 21 20 20 ILE ILE L . n C 3 22 SER 22 21 21 SER SER L . n C 3 23 CYS 23 22 22 CYS CYS L . n C 3 24 LYS 24 23 23 LYS LYS L . n C 3 25 SER 25 24 24 SER SER L . n C 3 26 SER 26 25 25 SER SER L . n C 3 27 GLN 27 26 26 GLN GLN L . n C 3 28 THR 28 27 27 THR THR L . n C 3 29 LEU 29 28 28 LEU LEU L . n C 3 30 LEU 30 29 29 LEU LEU L . n C 3 31 HIS 31 30 30 HIS HIS L . n C 3 32 SER 32 31 31 SER SER L . n C 3 33 ASP 33 32 32 ASP ASP L . n C 3 34 GLY 34 33 33 GLY GLY L . n C 3 35 GLN 35 34 34 GLN GLN L . n C 3 36 THR 36 35 35 THR THR L . n C 3 37 SER 37 36 36 SER SER L . n C 3 38 PHE 38 37 37 PHE PHE L . n C 3 39 TYR 39 38 38 TYR TYR L . n C 3 40 TRP 40 39 39 TRP TRP L . n C 3 41 TYR 41 40 40 TYR TYR L . n C 3 42 LEU 42 41 41 LEU LEU L . n C 3 43 GLN 43 42 42 GLN GLN L . n C 3 44 LYS 44 43 43 LYS LYS L . n C 3 45 PRO 45 44 44 PRO PRO L . n C 3 46 GLY 46 45 45 GLY GLY L . n C 3 47 GLN 47 46 46 GLN GLN L . n C 3 48 SER 48 47 47 SER SER L . n C 3 49 PRO 49 48 48 PRO PRO L . n C 3 50 GLN 50 49 49 GLN GLN L . n C 3 51 LEU 51 50 50 LEU LEU L . n C 3 52 LEU 52 51 51 LEU LEU L . n C 3 53 ILE 53 52 52 ILE ILE L . n C 3 54 TYR 54 53 53 TYR TYR L . n C 3 55 ASP 55 54 54 ASP ASP L . n C 3 56 ILE 56 55 55 ILE ILE L . n C 3 57 SER 57 56 56 SER SER L . n C 3 58 SER 58 57 57 SER SER L . n C 3 59 ARG 59 58 58 ARG ARG L . n C 3 60 PHE 60 59 59 PHE PHE L . n C 3 61 SER 61 60 60 SER SER L . n C 3 62 GLY 62 61 61 GLY GLY L . n C 3 63 VAL 63 62 62 VAL VAL L . n C 3 64 PRO 64 63 63 PRO PRO L . n C 3 65 ASP 65 64 64 ASP ASP L . n C 3 66 ARG 66 65 65 ARG ARG L . n C 3 67 PHE 67 66 66 PHE PHE L . n C 3 68 SER 68 67 67 SER SER L . n C 3 69 GLY 69 68 68 GLY GLY L . n C 3 70 SER 70 69 69 SER SER L . n C 3 71 GLY 71 70 70 GLY GLY L . n C 3 72 SER 72 71 71 SER SER L . n C 3 73 GLY 73 72 72 GLY GLY L . n C 3 74 THR 74 73 73 THR THR L . n C 3 75 ASP 75 74 74 ASP ASP L . n C 3 76 PHE 76 75 75 PHE PHE L . n C 3 77 THR 77 76 76 THR THR L . n C 3 78 LEU 78 77 77 LEU LEU L . n C 3 79 LYS 79 78 78 LYS LYS L . n C 3 80 ILE 80 79 79 ILE ILE L . n C 3 81 SER 81 80 80 SER SER L . n C 3 82 ARG 82 81 81 ARG ARG L . n C 3 83 VAL 83 82 82 VAL VAL L . n C 3 84 GLU 84 83 83 GLU GLU L . n C 3 85 ALA 85 84 84 ALA ALA L . n C 3 86 GLU 86 85 85 GLU GLU L . n C 3 87 ASP 87 86 86 ASP ASP L . n C 3 88 VAL 88 87 87 VAL VAL L . n C 3 89 GLY 89 88 88 GLY GLY L . n C 3 90 VAL 90 89 89 VAL VAL L . n C 3 91 TYR 91 90 90 TYR TYR L . n C 3 92 TYR 92 91 91 TYR TYR L . n C 3 93 CYS 93 92 92 CYS CYS L . n C 3 94 MET 94 93 93 MET MET L . n C 3 95 GLN 95 94 94 GLN GLN L . n C 3 96 GLY 96 95 95 GLY GLY L . n C 3 97 THR 97 96 96 THR THR L . n C 3 98 GLN 98 97 97 GLN GLN L . n C 3 99 PHE 99 98 ? ? ? L . n C 3 100 PRO 100 99 99 PRO PRO L . n C 3 101 TRP 101 100 100 TRP TRP L . n C 3 102 THR 102 101 101 THR THR L . n C 3 103 PHE 103 102 102 PHE PHE L . n C 3 104 GLY 104 103 103 GLY GLY L . n C 3 105 GLN 105 104 104 GLN GLN L . n C 3 106 GLY 106 105 105 GLY GLY L . n C 3 107 THR 107 106 ? ? ? L . n C 3 108 LYS 108 107 107 LYS LYS L . n C 3 109 VAL 109 108 108 VAL VAL L . n C 3 110 GLU 110 109 109 GLU GLU L . n C 3 111 ILE 111 110 110 ILE ILE L . n C 3 112 LYS 112 111 111 LYS LYS L . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 301 224 NAG NAG A . E 4 NAG 1 302 223 NAG NAG A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8JAP _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8JAP _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8JAP _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8JAP _struct.title 'Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8JAP _struct_keywords.text 'Cryo-EM, Complex, SARS-CoV-2, antibody, Homo sapiens, IgG, RBD, local refinement, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFD NPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVY SSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQT LLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRV QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSF VIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPC NGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN ; 1 2 PDB 8JAP 8JAP ? 2 ? 1 3 PDB 8JAP 8JAP ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8JAP A 1 ? 540 ? P0DTC2 1 ? 540 ? -317 222 2 2 8JAP H 1 ? 107 ? 8JAP 1 ? 107 ? 1 107 3 3 8JAP L 1 ? 112 ? 8JAP 0 ? 111 ? 0 111 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 338 ? ASN A 343 ? PHE A 20 ASN A 25 1 ? 6 HELX_P HELX_P2 AA2 TYR A 365 ? ASN A 370 ? TYR A 47 ASN A 52 1 ? 6 HELX_P HELX_P3 AA3 ARG A 403 ? VAL A 407 ? ARG A 85 VAL A 89 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 336 SG ? ? ? 1_555 A CYS 361 SG ? ? A CYS 18 A CYS 43 1_555 ? ? ? ? ? ? ? 2.134 ? ? disulf2 disulf ? ? A CYS 379 SG ? ? ? 1_555 A CYS 432 SG ? ? A CYS 61 A CYS 114 1_555 ? ? ? ? ? ? ? 2.043 ? ? disulf3 disulf ? ? A CYS 391 SG ? ? ? 1_555 A CYS 525 SG ? ? A CYS 73 A CYS 207 1_555 ? ? ? ? ? ? ? 2.098 ? ? disulf4 disulf ? ? A CYS 480 SG ? ? ? 1_555 A CYS 488 SG ? ? A CYS 162 A CYS 170 1_555 ? ? ? ? ? ? ? 2.019 ? ? disulf5 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 89 SG ? ? H CYS 22 H CYS 89 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf6 disulf ? ? C CYS 23 SG ? ? ? 1_555 C CYS 93 SG ? ? L CYS 22 L CYS 92 1_555 ? ? ? ? ? ? ? 2.113 ? ? covale1 covale one ? A ASN 331 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 13 A NAG 302 1_555 ? ? ? ? ? ? ? 1.533 ? N-Glycosylation covale2 covale one ? A ASN 343 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 25 A NAG 301 1_555 ? ? ? ? ? ? ? 1.509 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG D . ? ASN A 343 ? NAG A 301 ? 1_555 ASN A 25 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG E . ? ASN A 331 ? NAG A 302 ? 1_555 ASN A 13 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 CYS A 336 ? CYS A 361 ? CYS A 18 ? 1_555 CYS A 43 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 379 ? CYS A 432 ? CYS A 61 ? 1_555 CYS A 114 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS A 391 ? CYS A 525 ? CYS A 73 ? 1_555 CYS A 207 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS A 480 ? CYS A 488 ? CYS A 162 ? 1_555 CYS A 170 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 22 ? CYS B 89 ? CYS H 22 ? 1_555 CYS H 89 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS C 23 ? CYS C 93 ? CYS L 22 ? 1_555 CYS L 92 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? AA3 ? 5 ? AA4 ? 2 ? AA5 ? 3 ? AA6 ? 4 ? AA7 ? 3 ? AA8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 324 ? SER A 325 ? GLU A 6 SER A 7 AA1 2 VAL A 539 ? ASN A 540 ? VAL A 221 ASN A 222 AA2 1 ALA A 348 ? SER A 349 ? ALA A 30 SER A 31 AA2 2 VAL A 395 ? VAL A 401 ? VAL A 77 VAL A 83 AA2 3 LYS A 356 ? ILE A 358 ? LYS A 38 ILE A 40 AA3 1 ALA A 348 ? SER A 349 ? ALA A 30 SER A 31 AA3 2 VAL A 395 ? VAL A 401 ? VAL A 77 VAL A 83 AA3 3 VAL A 510 ? PHE A 515 ? VAL A 192 PHE A 197 AA3 4 CYS A 432 ? ALA A 435 ? CYS A 114 ALA A 117 AA3 5 THR A 376 ? CYS A 379 ? THR A 58 CYS A 61 AA4 1 GLU B 10 ? LEU B 11 ? GLU H 10 LEU H 11 AA4 2 VAL B 103 ? THR B 104 ? VAL H 103 THR H 104 AA5 1 ALA B 72 ? TYR B 73 ? ALA H 72 TYR H 73 AA5 2 VAL B 18 ? CYS B 22 ? VAL H 18 CYS H 22 AA5 3 ILE B 76 ? ILE B 76 ? ILE H 76 ILE H 76 AA6 1 LEU B 45 ? GLY B 49 ? LEU H 45 GLY H 49 AA6 2 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA6 3 TYR B 88 ? ARG B 91 ? TYR H 88 ARG H 91 AA6 4 PHE B 98 ? GLN B 99 ? PHE H 98 GLN H 99 AA7 1 THR C 5 ? GLN C 6 ? THR L 4 GLN L 5 AA7 2 ALA C 19 ? LYS C 24 ? ALA L 18 LYS L 23 AA7 3 ASP C 75 ? ILE C 80 ? ASP L 74 ILE L 79 AA8 1 LEU C 51 ? TYR C 54 ? LEU L 50 TYR L 53 AA8 2 PHE C 38 ? GLN C 43 ? PHE L 37 GLN L 42 AA8 3 VAL C 90 ? MET C 94 ? VAL L 89 MET L 93 AA8 4 THR C 102 ? GLY C 106 ? THR L 101 GLY L 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 324 ? N GLU A 6 O ASN A 540 ? O ASN A 222 AA2 1 2 N ALA A 348 ? N ALA A 30 O VAL A 401 ? O VAL A 83 AA2 2 3 O VAL A 395 ? O VAL A 77 N ILE A 358 ? N ILE A 40 AA3 1 2 N ALA A 348 ? N ALA A 30 O VAL A 401 ? O VAL A 83 AA3 2 3 N ASP A 398 ? N ASP A 80 O VAL A 512 ? O VAL A 194 AA3 3 4 O VAL A 511 ? O VAL A 193 N ILE A 434 ? N ILE A 116 AA3 4 5 O VAL A 433 ? O VAL A 115 N LYS A 378 ? N LYS A 60 AA4 1 2 N GLU B 10 ? N GLU H 10 O THR B 104 ? O THR H 104 AA5 1 2 O ALA B 72 ? O ALA H 72 N CYS B 22 ? N CYS H 22 AA5 2 3 N VAL B 18 ? N VAL H 18 O ILE B 76 ? O ILE H 76 AA6 1 2 O GLU B 46 ? O GLU H 46 N ARG B 38 ? N ARG H 38 AA6 2 3 N VAL B 37 ? N VAL H 37 O TYR B 88 ? O TYR H 88 AA6 3 4 N CYS B 89 ? N CYS H 89 O GLN B 99 ? O GLN H 99 AA7 1 2 N THR C 5 ? N THR L 4 O LYS C 24 ? O LYS L 23 AA7 2 3 N ALA C 19 ? N ALA L 18 O ILE C 80 ? O ILE L 79 AA8 1 2 O TYR C 54 ? O TYR L 53 N PHE C 38 ? N PHE L 37 AA8 2 3 N TYR C 39 ? N TYR L 38 O MET C 94 ? O MET L 93 AA8 3 4 N TYR C 91 ? N TYR L 90 O GLY C 106 ? O GLY L 105 # _pdbx_entry_details.entry_id 8JAP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD1 A TYR 33 ? ? CE1 A TYR 33 ? ? 1.290 1.389 -0.099 0.015 N 2 1 CB A TYR 135 ? ? CG A TYR 135 ? ? 1.416 1.512 -0.096 0.015 N 3 1 CG A PHE 168 ? ? CD2 A PHE 168 ? ? 1.475 1.383 0.092 0.015 N 4 1 CG A PHE 168 ? ? CD1 A PHE 168 ? ? 1.476 1.383 0.093 0.015 N 5 1 CB H VAL 37 ? ? CG1 H VAL 37 ? ? 1.224 1.524 -0.300 0.021 N 6 1 CB H PHE 63 ? ? CG H PHE 63 ? ? 1.391 1.509 -0.118 0.017 N 7 1 CG H TYR 73 ? ? CD2 H TYR 73 ? ? 1.475 1.387 0.088 0.013 N 8 1 CG H TYR 73 ? ? CD1 H TYR 73 ? ? 1.492 1.387 0.105 0.013 N 9 1 CE1 H TYR 73 ? ? CZ H TYR 73 ? ? 1.467 1.381 0.086 0.013 N 10 1 CZ H TYR 73 ? ? CE2 H TYR 73 ? ? 1.476 1.381 0.095 0.013 N 11 1 CB L VAL 89 ? ? CG1 L VAL 89 ? ? 1.384 1.524 -0.140 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 139 ? ? CZ A ARG 139 ? ? NH2 A ARG 139 ? ? 116.93 120.30 -3.37 0.50 N 2 1 C L GLN 16 ? ? N L PRO 17 ? ? CA L PRO 17 ? ? 129.27 119.30 9.97 1.50 Y 3 1 NE L ARG 58 ? ? CZ L ARG 58 ? ? NH2 L ARG 58 ? ? 117.00 120.30 -3.30 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 18 ? ? 69.01 82.83 2 1 VAL A 32 ? ? -59.83 -7.89 3 1 LYS A 68 ? ? -107.30 -112.35 4 1 LEU A 69 ? ? 63.99 -55.62 5 1 ASN A 104 ? ? -122.26 -150.35 6 1 TYR A 131 ? ? -143.21 -153.92 7 1 LEU A 134 ? ? -113.74 -162.07 8 1 ARG A 139 ? ? -146.10 -31.57 9 1 SER A 141 ? ? -156.47 -21.02 10 1 LEU A 143 ? ? 63.25 160.22 11 1 PHE A 179 ? ? -163.64 -29.17 12 1 GLN A 180 ? ? -34.11 114.92 13 1 PRO A 181 ? ? -40.26 94.83 14 1 TYR A 187 ? ? -161.92 8.83 15 1 ARG A 191 ? ? 41.70 71.17 16 1 LYS A 211 ? ? -174.15 138.51 17 1 SER A 212 ? ? -175.66 87.40 18 1 LYS A 217 ? ? 57.72 11.61 19 1 VAL H 2 ? ? 35.72 48.90 20 1 SER H 7 ? ? -109.17 -164.46 21 1 TRP H 50 ? ? -143.93 -92.43 22 1 SER H 68 ? ? 50.43 -128.28 23 1 SER H 78 ? ? -137.47 -32.15 24 1 ASP H 82 ? ? 51.67 80.55 25 1 ALA H 85 ? ? 52.12 70.79 26 1 LEU H 95 ? ? 55.32 13.90 27 1 SER L 9 ? ? -121.69 -88.98 28 1 ALA L 84 ? ? 48.78 -119.07 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8JAP _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8JAP _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.81 _em_3d_reconstruction.resolution_method 'FSC 0.5 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 146713 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Cryo-EM structure of SARS-CoV-2 WT in complex with W328-6H2' 'Cryo-EM structure of SARS-CoV-2 WT in complex with W328-6H2' ? ? 2,3 2 1 RECOMBINANT COMPLEX 'SARS-CoV-2 WT 6p' 'SARS-CoV-2 WT 6p' ? ? 1 3 1 RECOMBINANT COMPLEX 'W328-6H2 IgG' 'W328-6H2 IgG' ? ? 2,3 # _em_imaging.entry_id 8JAP _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type 'Quantifoil R2/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8JAP _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8JAP _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -317 ? A MET 1 2 1 Y 1 A PHE -316 ? A PHE 2 3 1 Y 1 A VAL -315 ? A VAL 3 4 1 Y 1 A PHE -314 ? A PHE 4 5 1 Y 1 A LEU -313 ? A LEU 5 6 1 Y 1 A VAL -312 ? A VAL 6 7 1 Y 1 A LEU -311 ? A LEU 7 8 1 Y 1 A LEU -310 ? A LEU 8 9 1 Y 1 A PRO -309 ? A PRO 9 10 1 Y 1 A LEU -308 ? A LEU 10 11 1 Y 1 A VAL -307 ? A VAL 11 12 1 Y 1 A SER -306 ? A SER 12 13 1 Y 1 A SER -305 ? A SER 13 14 1 Y 1 A GLN -304 ? A GLN 14 15 1 Y 1 A CYS -303 ? A CYS 15 16 1 Y 1 A VAL -302 ? A VAL 16 17 1 Y 1 A ASN -301 ? A ASN 17 18 1 Y 1 A LEU -300 ? A LEU 18 19 1 Y 1 A THR -299 ? A THR 19 20 1 Y 1 A THR -298 ? A THR 20 21 1 Y 1 A ARG -297 ? A ARG 21 22 1 Y 1 A THR -296 ? A THR 22 23 1 Y 1 A GLN -295 ? A GLN 23 24 1 Y 1 A LEU -294 ? A LEU 24 25 1 Y 1 A PRO -293 ? A PRO 25 26 1 Y 1 A PRO -292 ? A PRO 26 27 1 Y 1 A ALA -291 ? A ALA 27 28 1 Y 1 A TYR -290 ? A TYR 28 29 1 Y 1 A THR -289 ? A THR 29 30 1 Y 1 A ASN -288 ? A ASN 30 31 1 Y 1 A SER -287 ? A SER 31 32 1 Y 1 A PHE -286 ? A PHE 32 33 1 Y 1 A THR -285 ? A THR 33 34 1 Y 1 A ARG -284 ? A ARG 34 35 1 Y 1 A GLY -283 ? A GLY 35 36 1 Y 1 A VAL -282 ? A VAL 36 37 1 Y 1 A TYR -281 ? A TYR 37 38 1 Y 1 A TYR -280 ? A TYR 38 39 1 Y 1 A PRO -279 ? A PRO 39 40 1 Y 1 A ASP -278 ? A ASP 40 41 1 Y 1 A LYS -277 ? A LYS 41 42 1 Y 1 A VAL -276 ? A VAL 42 43 1 Y 1 A PHE -275 ? A PHE 43 44 1 Y 1 A ARG -274 ? A ARG 44 45 1 Y 1 A SER -273 ? A SER 45 46 1 Y 1 A SER -272 ? A SER 46 47 1 Y 1 A VAL -271 ? A VAL 47 48 1 Y 1 A LEU -270 ? A LEU 48 49 1 Y 1 A HIS -269 ? A HIS 49 50 1 Y 1 A SER -268 ? A SER 50 51 1 Y 1 A THR -267 ? A THR 51 52 1 Y 1 A GLN -266 ? A GLN 52 53 1 Y 1 A ASP -265 ? A ASP 53 54 1 Y 1 A LEU -264 ? A LEU 54 55 1 Y 1 A PHE -263 ? A PHE 55 56 1 Y 1 A LEU -262 ? A LEU 56 57 1 Y 1 A PRO -261 ? A PRO 57 58 1 Y 1 A PHE -260 ? A PHE 58 59 1 Y 1 A PHE -259 ? A PHE 59 60 1 Y 1 A SER -258 ? A SER 60 61 1 Y 1 A ASN -257 ? A ASN 61 62 1 Y 1 A VAL -256 ? A VAL 62 63 1 Y 1 A THR -255 ? A THR 63 64 1 Y 1 A TRP -254 ? A TRP 64 65 1 Y 1 A PHE -253 ? A PHE 65 66 1 Y 1 A HIS -252 ? A HIS 66 67 1 Y 1 A ALA -251 ? A ALA 67 68 1 Y 1 A ILE -250 ? A ILE 68 69 1 Y 1 A HIS -249 ? A HIS 69 70 1 Y 1 A VAL -248 ? A VAL 70 71 1 Y 1 A SER -247 ? A SER 71 72 1 Y 1 A GLY -246 ? A GLY 72 73 1 Y 1 A THR -245 ? A THR 73 74 1 Y 1 A ASN -244 ? A ASN 74 75 1 Y 1 A GLY -243 ? A GLY 75 76 1 Y 1 A THR -242 ? A THR 76 77 1 Y 1 A LYS -241 ? A LYS 77 78 1 Y 1 A ARG -240 ? A ARG 78 79 1 Y 1 A PHE -239 ? A PHE 79 80 1 Y 1 A ASP -238 ? A ASP 80 81 1 Y 1 A ASN -237 ? A ASN 81 82 1 Y 1 A PRO -236 ? A PRO 82 83 1 Y 1 A VAL -235 ? A VAL 83 84 1 Y 1 A LEU -234 ? A LEU 84 85 1 Y 1 A PRO -233 ? A PRO 85 86 1 Y 1 A PHE -232 ? A PHE 86 87 1 Y 1 A ASN -231 ? A ASN 87 88 1 Y 1 A ASP -230 ? A ASP 88 89 1 Y 1 A GLY -229 ? A GLY 89 90 1 Y 1 A VAL -228 ? A VAL 90 91 1 Y 1 A TYR -227 ? A TYR 91 92 1 Y 1 A PHE -226 ? A PHE 92 93 1 Y 1 A ALA -225 ? A ALA 93 94 1 Y 1 A SER -224 ? A SER 94 95 1 Y 1 A THR -223 ? A THR 95 96 1 Y 1 A GLU -222 ? A GLU 96 97 1 Y 1 A LYS -221 ? A LYS 97 98 1 Y 1 A SER -220 ? A SER 98 99 1 Y 1 A ASN -219 ? A ASN 99 100 1 Y 1 A ILE -218 ? A ILE 100 101 1 Y 1 A ILE -217 ? A ILE 101 102 1 Y 1 A ARG -216 ? A ARG 102 103 1 Y 1 A GLY -215 ? A GLY 103 104 1 Y 1 A TRP -214 ? A TRP 104 105 1 Y 1 A ILE -213 ? A ILE 105 106 1 Y 1 A PHE -212 ? A PHE 106 107 1 Y 1 A GLY -211 ? A GLY 107 108 1 Y 1 A THR -210 ? A THR 108 109 1 Y 1 A THR -209 ? A THR 109 110 1 Y 1 A LEU -208 ? A LEU 110 111 1 Y 1 A ASP -207 ? A ASP 111 112 1 Y 1 A SER -206 ? A SER 112 113 1 Y 1 A LYS -205 ? A LYS 113 114 1 Y 1 A THR -204 ? A THR 114 115 1 Y 1 A GLN -203 ? A GLN 115 116 1 Y 1 A SER -202 ? A SER 116 117 1 Y 1 A LEU -201 ? A LEU 117 118 1 Y 1 A LEU -200 ? A LEU 118 119 1 Y 1 A ILE -199 ? A ILE 119 120 1 Y 1 A VAL -198 ? A VAL 120 121 1 Y 1 A ASN -197 ? A ASN 121 122 1 Y 1 A ASN -196 ? A ASN 122 123 1 Y 1 A ALA -195 ? A ALA 123 124 1 Y 1 A THR -194 ? A THR 124 125 1 Y 1 A ASN -193 ? A ASN 125 126 1 Y 1 A VAL -192 ? A VAL 126 127 1 Y 1 A VAL -191 ? A VAL 127 128 1 Y 1 A ILE -190 ? A ILE 128 129 1 Y 1 A LYS -189 ? A LYS 129 130 1 Y 1 A VAL -188 ? A VAL 130 131 1 Y 1 A CYS -187 ? A CYS 131 132 1 Y 1 A GLU -186 ? A GLU 132 133 1 Y 1 A PHE -185 ? A PHE 133 134 1 Y 1 A GLN -184 ? A GLN 134 135 1 Y 1 A PHE -183 ? A PHE 135 136 1 Y 1 A CYS -182 ? A CYS 136 137 1 Y 1 A ASN -181 ? A ASN 137 138 1 Y 1 A ASP -180 ? A ASP 138 139 1 Y 1 A PRO -179 ? A PRO 139 140 1 Y 1 A PHE -178 ? A PHE 140 141 1 Y 1 A LEU -177 ? A LEU 141 142 1 Y 1 A GLY -176 ? A GLY 142 143 1 Y 1 A VAL -175 ? A VAL 143 144 1 Y 1 A TYR -174 ? A TYR 144 145 1 Y 1 A TYR -173 ? A TYR 145 146 1 Y 1 A HIS -172 ? A HIS 146 147 1 Y 1 A LYS -171 ? A LYS 147 148 1 Y 1 A ASN -170 ? A ASN 148 149 1 Y 1 A ASN -169 ? A ASN 149 150 1 Y 1 A LYS -168 ? A LYS 150 151 1 Y 1 A SER -167 ? A SER 151 152 1 Y 1 A TRP -166 ? A TRP 152 153 1 Y 1 A MET -165 ? A MET 153 154 1 Y 1 A GLU -164 ? A GLU 154 155 1 Y 1 A SER -163 ? A SER 155 156 1 Y 1 A GLU -162 ? A GLU 156 157 1 Y 1 A PHE -161 ? A PHE 157 158 1 Y 1 A ARG -160 ? A ARG 158 159 1 Y 1 A VAL -159 ? A VAL 159 160 1 Y 1 A TYR -158 ? A TYR 160 161 1 Y 1 A SER -157 ? A SER 161 162 1 Y 1 A SER -156 ? A SER 162 163 1 Y 1 A ALA -155 ? A ALA 163 164 1 Y 1 A ASN -154 ? A ASN 164 165 1 Y 1 A ASN -153 ? A ASN 165 166 1 Y 1 A CYS -152 ? A CYS 166 167 1 Y 1 A THR -151 ? A THR 167 168 1 Y 1 A PHE -150 ? A PHE 168 169 1 Y 1 A GLU -149 ? A GLU 169 170 1 Y 1 A TYR -148 ? A TYR 170 171 1 Y 1 A VAL -147 ? A VAL 171 172 1 Y 1 A SER -146 ? A SER 172 173 1 Y 1 A GLN -145 ? A GLN 173 174 1 Y 1 A PRO -144 ? A PRO 174 175 1 Y 1 A PHE -143 ? A PHE 175 176 1 Y 1 A LEU -142 ? A LEU 176 177 1 Y 1 A MET -141 ? A MET 177 178 1 Y 1 A ASP -140 ? A ASP 178 179 1 Y 1 A LEU -139 ? A LEU 179 180 1 Y 1 A GLU -138 ? A GLU 180 181 1 Y 1 A GLY -137 ? A GLY 181 182 1 Y 1 A LYS -136 ? A LYS 182 183 1 Y 1 A GLN -135 ? A GLN 183 184 1 Y 1 A GLY -134 ? A GLY 184 185 1 Y 1 A ASN -133 ? A ASN 185 186 1 Y 1 A PHE -132 ? A PHE 186 187 1 Y 1 A LYS -131 ? A LYS 187 188 1 Y 1 A ASN -130 ? A ASN 188 189 1 Y 1 A LEU -129 ? A LEU 189 190 1 Y 1 A ARG -128 ? A ARG 190 191 1 Y 1 A GLU -127 ? A GLU 191 192 1 Y 1 A PHE -126 ? A PHE 192 193 1 Y 1 A VAL -125 ? A VAL 193 194 1 Y 1 A PHE -124 ? A PHE 194 195 1 Y 1 A LYS -123 ? A LYS 195 196 1 Y 1 A ASN -122 ? A ASN 196 197 1 Y 1 A ILE -121 ? A ILE 197 198 1 Y 1 A ASP -120 ? A ASP 198 199 1 Y 1 A GLY -119 ? A GLY 199 200 1 Y 1 A TYR -118 ? A TYR 200 201 1 Y 1 A PHE -117 ? A PHE 201 202 1 Y 1 A LYS -116 ? A LYS 202 203 1 Y 1 A ILE -115 ? A ILE 203 204 1 Y 1 A TYR -114 ? A TYR 204 205 1 Y 1 A SER -113 ? A SER 205 206 1 Y 1 A LYS -112 ? A LYS 206 207 1 Y 1 A HIS -111 ? A HIS 207 208 1 Y 1 A THR -110 ? A THR 208 209 1 Y 1 A PRO -109 ? A PRO 209 210 1 Y 1 A ILE -108 ? A ILE 210 211 1 Y 1 A ASN -107 ? A ASN 211 212 1 Y 1 A LEU -106 ? A LEU 212 213 1 Y 1 A VAL -105 ? A VAL 213 214 1 Y 1 A ARG -104 ? A ARG 214 215 1 Y 1 A ASP -103 ? A ASP 215 216 1 Y 1 A LEU -102 ? A LEU 216 217 1 Y 1 A PRO -101 ? A PRO 217 218 1 Y 1 A GLN -100 ? A GLN 218 219 1 Y 1 A GLY -99 ? A GLY 219 220 1 Y 1 A PHE -98 ? A PHE 220 221 1 Y 1 A SER -97 ? A SER 221 222 1 Y 1 A ALA -96 ? A ALA 222 223 1 Y 1 A LEU -95 ? A LEU 223 224 1 Y 1 A GLU -94 ? A GLU 224 225 1 Y 1 A PRO -93 ? A PRO 225 226 1 Y 1 A LEU -92 ? A LEU 226 227 1 Y 1 A VAL -91 ? A VAL 227 228 1 Y 1 A ASP -90 ? A ASP 228 229 1 Y 1 A LEU -89 ? A LEU 229 230 1 Y 1 A PRO -88 ? A PRO 230 231 1 Y 1 A ILE -87 ? A ILE 231 232 1 Y 1 A GLY -86 ? A GLY 232 233 1 Y 1 A ILE -85 ? A ILE 233 234 1 Y 1 A ASN -84 ? A ASN 234 235 1 Y 1 A ILE -83 ? A ILE 235 236 1 Y 1 A THR -82 ? A THR 236 237 1 Y 1 A ARG -81 ? A ARG 237 238 1 Y 1 A PHE -80 ? A PHE 238 239 1 Y 1 A GLN -79 ? A GLN 239 240 1 Y 1 A THR -78 ? A THR 240 241 1 Y 1 A LEU -77 ? A LEU 241 242 1 Y 1 A LEU -76 ? A LEU 242 243 1 Y 1 A ALA -75 ? A ALA 243 244 1 Y 1 A LEU -74 ? A LEU 244 245 1 Y 1 A HIS -73 ? A HIS 245 246 1 Y 1 A ARG -72 ? A ARG 246 247 1 Y 1 A SER -71 ? A SER 247 248 1 Y 1 A TYR -70 ? A TYR 248 249 1 Y 1 A LEU -69 ? A LEU 249 250 1 Y 1 A THR -68 ? A THR 250 251 1 Y 1 A PRO -67 ? A PRO 251 252 1 Y 1 A GLY -66 ? A GLY 252 253 1 Y 1 A ASP -65 ? A ASP 253 254 1 Y 1 A SER -64 ? A SER 254 255 1 Y 1 A SER -63 ? A SER 255 256 1 Y 1 A SER -62 ? A SER 256 257 1 Y 1 A GLY -61 ? A GLY 257 258 1 Y 1 A TRP -60 ? A TRP 258 259 1 Y 1 A THR -59 ? A THR 259 260 1 Y 1 A ALA -58 ? A ALA 260 261 1 Y 1 A GLY -57 ? A GLY 261 262 1 Y 1 A ALA -56 ? A ALA 262 263 1 Y 1 A ALA -55 ? A ALA 263 264 1 Y 1 A ALA -54 ? A ALA 264 265 1 Y 1 A TYR -53 ? A TYR 265 266 1 Y 1 A TYR -52 ? A TYR 266 267 1 Y 1 A VAL -51 ? A VAL 267 268 1 Y 1 A GLY -50 ? A GLY 268 269 1 Y 1 A TYR -49 ? A TYR 269 270 1 Y 1 A LEU -48 ? A LEU 270 271 1 Y 1 A GLN -47 ? A GLN 271 272 1 Y 1 A PRO -46 ? A PRO 272 273 1 Y 1 A ARG -45 ? A ARG 273 274 1 Y 1 A THR -44 ? A THR 274 275 1 Y 1 A PHE -43 ? A PHE 275 276 1 Y 1 A LEU -42 ? A LEU 276 277 1 Y 1 A LEU -41 ? A LEU 277 278 1 Y 1 A LYS -40 ? A LYS 278 279 1 Y 1 A TYR -39 ? A TYR 279 280 1 Y 1 A ASN -38 ? A ASN 280 281 1 Y 1 A GLU -37 ? A GLU 281 282 1 Y 1 A ASN -36 ? A ASN 282 283 1 Y 1 A GLY -35 ? A GLY 283 284 1 Y 1 A THR -34 ? A THR 284 285 1 Y 1 A ILE -33 ? A ILE 285 286 1 Y 1 A THR -32 ? A THR 286 287 1 Y 1 A ASP -31 ? A ASP 287 288 1 Y 1 A ALA -30 ? A ALA 288 289 1 Y 1 A VAL -29 ? A VAL 289 290 1 Y 1 A ASP -28 ? A ASP 290 291 1 Y 1 A CYS -27 ? A CYS 291 292 1 Y 1 A ALA -26 ? A ALA 292 293 1 Y 1 A LEU -25 ? A LEU 293 294 1 Y 1 A ASP -24 ? A ASP 294 295 1 Y 1 A PRO -23 ? A PRO 295 296 1 Y 1 A LEU -22 ? A LEU 296 297 1 Y 1 A SER -21 ? A SER 297 298 1 Y 1 A GLU -20 ? A GLU 298 299 1 Y 1 A THR -19 ? A THR 299 300 1 Y 1 A LYS -18 ? A LYS 300 301 1 Y 1 A CYS -17 ? A CYS 301 302 1 Y 1 A THR -16 ? A THR 302 303 1 Y 1 A LEU -15 ? A LEU 303 304 1 Y 1 A LYS -14 ? A LYS 304 305 1 Y 1 A SER -13 ? A SER 305 306 1 Y 1 A PHE -12 ? A PHE 306 307 1 Y 1 A THR -11 ? A THR 307 308 1 Y 1 A VAL -10 ? A VAL 308 309 1 Y 1 A GLU -9 ? A GLU 309 310 1 Y 1 A LYS -8 ? A LYS 310 311 1 Y 1 A GLY -7 ? A GLY 311 312 1 Y 1 A ILE -6 ? A ILE 312 313 1 Y 1 A TYR -5 ? A TYR 313 314 1 Y 1 A GLN -4 ? A GLN 314 315 1 Y 1 A THR -3 ? A THR 315 316 1 Y 1 A SER -2 ? A SER 316 317 1 Y 1 A ASN -1 ? A ASN 317 318 1 Y 1 A PHE 0 ? A PHE 318 319 1 Y 1 A GLY 167 ? A GLY 485 320 1 Y 1 A ASN 183 ? A ASN 501 321 1 Y 1 A GLY 184 ? A GLY 502 322 1 Y 1 H LEU 74 ? B LEU 74 323 1 Y 1 H THR 101 ? B THR 101 324 1 Y 1 L ASP 0 ? C ASP 1 325 1 Y 1 L PHE 98 ? C PHE 99 326 1 Y 1 L THR 106 ? C THR 107 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 1 1 9606 'Homo sapiens' ? ? ? ? ? ? ? 2 2 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? ? 3 3 9606 'Homo sapiens' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 1 1 9606 'Homo sapiens' ? ? ? 2 2 9606 'Homo sapiens' ? ? ? 3 3 9606 'Homo sapiens' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? Gctf ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other government' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number 22277017 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8JAP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ #