HEADER HYDROLASE 10-MAY-23 8JBY TITLE VASCULAR ENDOTHELIAL PROTEIN TYROSINE PHOSPHATASE IN COMPLEX WITH CPD- TITLE 2 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE BETA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE BETA,R-PTP-BETA,VASCULAR COMPND 5 ENDOTHELIAL PROTEIN TYROSINE PHOSPHATASE,VE-PTP; COMPND 6 EC: 3.1.3.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPRB, PTPB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN TYROSINE PHOSPHATASE, FBDD, INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.ORITA,T.FURUZONO,S.DOI,T.ADACHI REVDAT 1 28-FEB-24 8JBY 0 JRNL AUTH W.ASANO,K.YAMANAKA,Y.OHARA,T.UHARA,S.DOI,T.ORITA,T.IWANAGA, JRNL AUTH 2 T.ADACHI,S.FUJIOKA,T.AKAKI,K.IKEGASHIRA,Y.HANTANI JRNL TITL FRAGMENT-BASED DISCOVERY OF NOVEL VE-PTP INHIBITORS USING JRNL TITL 2 ORTHOGONAL BIOPHYSICAL TECHNIQUES. JRNL REF BIOCHEMISTRY V. 62 2161 2023 JRNL REFN ISSN 0006-2960 JRNL PMID 37414577 JRNL DOI 10.1021/ACS.BIOCHEM.3C00079 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 56364 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 2780 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 61.8500 - 5.4000 0.99 2981 136 0.1902 0.2058 REMARK 3 2 5.4000 - 4.2900 0.99 2783 135 0.1445 0.1510 REMARK 3 3 4.2900 - 3.7500 1.00 2763 127 0.1538 0.1581 REMARK 3 4 3.7500 - 3.4000 1.00 2723 158 0.1665 0.1786 REMARK 3 5 3.4000 - 3.1600 0.99 2696 130 0.1828 0.2511 REMARK 3 6 3.1600 - 2.9700 1.00 2690 141 0.2031 0.2281 REMARK 3 7 2.9700 - 2.8200 1.00 2692 143 0.1924 0.2199 REMARK 3 8 2.8200 - 2.7000 1.00 2676 141 0.1893 0.2443 REMARK 3 9 2.7000 - 2.6000 1.00 2663 152 0.2015 0.2503 REMARK 3 10 2.6000 - 2.5100 0.98 2636 133 0.2127 0.2546 REMARK 3 11 2.5100 - 2.4300 0.99 2628 154 0.2242 0.2403 REMARK 3 12 2.4300 - 2.3600 0.99 2650 148 0.2219 0.2444 REMARK 3 13 2.3600 - 2.3000 0.99 2655 124 0.2116 0.2743 REMARK 3 14 2.3000 - 2.2400 0.99 2628 135 0.1997 0.2388 REMARK 3 15 2.2400 - 2.1900 0.99 2659 140 0.2035 0.2211 REMARK 3 16 2.1900 - 2.1400 0.99 2631 135 0.2021 0.2228 REMARK 3 17 2.1400 - 2.1000 0.99 2604 142 0.2251 0.2550 REMARK 3 18 2.1000 - 2.0600 0.98 2601 129 0.2389 0.3152 REMARK 3 19 2.0600 - 2.0200 0.99 2607 141 0.2752 0.3177 REMARK 3 20 2.0200 - 1.9900 0.99 2618 136 0.3045 0.2952 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.247 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.63 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4773 REMARK 3 ANGLE : 0.573 6481 REMARK 3 CHIRALITY : 0.044 686 REMARK 3 PLANARITY : 0.004 839 REMARK 3 DIHEDRAL : 12.963 1780 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1685 THROUGH 1710 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2495 85.3162 -5.9339 REMARK 3 T TENSOR REMARK 3 T11: 0.2972 T22: 0.5727 REMARK 3 T33: 0.4743 T12: -0.0777 REMARK 3 T13: 0.0221 T23: -0.0790 REMARK 3 L TENSOR REMARK 3 L11: 5.3424 L22: 7.9319 REMARK 3 L33: 6.9810 L12: 1.3759 REMARK 3 L13: 1.4219 L23: -2.7208 REMARK 3 S TENSOR REMARK 3 S11: 0.1586 S12: -0.6680 S13: 0.5307 REMARK 3 S21: -0.0072 S22: -0.1634 S23: -0.2000 REMARK 3 S31: -0.6705 S32: 0.5723 S33: 0.0346 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1711 THROUGH 1763 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.7482 53.4715 3.6354 REMARK 3 T TENSOR REMARK 3 T11: 0.3060 T22: 0.4264 REMARK 3 T33: 0.3725 T12: -0.0409 REMARK 3 T13: -0.0143 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 4.4587 L22: 6.5162 REMARK 3 L33: 4.0226 L12: 1.5354 REMARK 3 L13: -0.7747 L23: -0.6773 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: -0.3275 S13: -0.8113 REMARK 3 S21: 0.4525 S22: -0.2204 S23: -0.4603 REMARK 3 S31: 0.6492 S32: -0.0054 S33: 0.1790 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1764 THROUGH 1837 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8480 61.9094 10.9596 REMARK 3 T TENSOR REMARK 3 T11: 0.3695 T22: 0.4782 REMARK 3 T33: 0.3364 T12: -0.1033 REMARK 3 T13: 0.0855 T23: -0.0728 REMARK 3 L TENSOR REMARK 3 L11: 4.5471 L22: 4.7422 REMARK 3 L33: 4.0615 L12: 1.0775 REMARK 3 L13: -0.4925 L23: 0.0596 REMARK 3 S TENSOR REMARK 3 S11: 0.0870 S12: -0.2175 S13: -0.0358 REMARK 3 S21: 0.5268 S22: -0.0580 S23: 0.4693 REMARK 3 S31: 0.2130 S32: -0.3545 S33: -0.0772 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1838 THROUGH 1949 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9011 72.6242 9.5044 REMARK 3 T TENSOR REMARK 3 T11: 0.3769 T22: 0.5151 REMARK 3 T33: 0.3785 T12: -0.0714 REMARK 3 T13: 0.0380 T23: -0.1121 REMARK 3 L TENSOR REMARK 3 L11: 2.6644 L22: 2.8302 REMARK 3 L33: 3.3545 L12: 0.5108 REMARK 3 L13: -1.1911 L23: 0.3425 REMARK 3 S TENSOR REMARK 3 S11: 0.1739 S12: -0.3516 S13: 0.1494 REMARK 3 S21: 0.4355 S22: -0.1213 S23: 0.2847 REMARK 3 S31: -0.0043 S32: -0.0606 S33: -0.0613 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1950 THROUGH 1971 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.6687 87.4439 0.9569 REMARK 3 T TENSOR REMARK 3 T11: 0.4955 T22: 0.4272 REMARK 3 T33: 0.4426 T12: 0.0134 REMARK 3 T13: 0.0265 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 7.4749 L22: 4.1245 REMARK 3 L33: 5.1016 L12: 0.6847 REMARK 3 L13: 0.6611 L23: 4.4936 REMARK 3 S TENSOR REMARK 3 S11: 0.1882 S12: 0.0514 S13: 0.8900 REMARK 3 S21: -0.7303 S22: -0.4555 S23: 0.6148 REMARK 3 S31: -0.9884 S32: -0.4504 S33: 0.2223 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1694 THROUGH 1709 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7305 17.6537 15.5691 REMARK 3 T TENSOR REMARK 3 T11: 1.2152 T22: 0.8125 REMARK 3 T33: 0.8881 T12: 0.2420 REMARK 3 T13: -0.1961 T23: 0.1101 REMARK 3 L TENSOR REMARK 3 L11: 7.2013 L22: 9.7127 REMARK 3 L33: 4.9231 L12: -2.5745 REMARK 3 L13: 2.8650 L23: -6.8001 REMARK 3 S TENSOR REMARK 3 S11: 0.1733 S12: -0.4857 S13: -0.4283 REMARK 3 S21: 0.8925 S22: -0.7606 S23: -0.6402 REMARK 3 S31: 0.2784 S32: 0.9920 S33: 0.9754 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1710 THROUGH 1759 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3667 41.8977 -5.9292 REMARK 3 T TENSOR REMARK 3 T11: 0.2335 T22: 0.4296 REMARK 3 T33: 0.3084 T12: -0.0501 REMARK 3 T13: 0.0271 T23: -0.0496 REMARK 3 L TENSOR REMARK 3 L11: 4.4484 L22: 8.1884 REMARK 3 L33: 4.9565 L12: 1.4508 REMARK 3 L13: -0.9431 L23: 1.1524 REMARK 3 S TENSOR REMARK 3 S11: 0.0680 S12: 0.0738 S13: -0.0549 REMARK 3 S21: -0.4764 S22: 0.1295 S23: -0.3112 REMARK 3 S31: -0.1178 S32: 0.3249 S33: -0.1152 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1760 THROUGH 1850 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.1099 42.3591 -0.8105 REMARK 3 T TENSOR REMARK 3 T11: 0.2663 T22: 0.3415 REMARK 3 T33: 0.3083 T12: -0.0466 REMARK 3 T13: -0.0075 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 5.0372 L22: 2.9508 REMARK 3 L33: 2.7467 L12: -0.1481 REMARK 3 L13: -0.1308 L23: 0.3272 REMARK 3 S TENSOR REMARK 3 S11: 0.1271 S12: -0.3054 S13: 0.1438 REMARK 3 S21: 0.2340 S22: -0.0364 S23: 0.1406 REMARK 3 S31: 0.0202 S32: -0.1612 S33: -0.0626 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1851 THROUGH 1892 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9504 34.3827 3.3142 REMARK 3 T TENSOR REMARK 3 T11: 0.2739 T22: 0.4164 REMARK 3 T33: 0.4184 T12: -0.1096 REMARK 3 T13: 0.0758 T23: 0.0971 REMARK 3 L TENSOR REMARK 3 L11: 4.6237 L22: 3.0984 REMARK 3 L33: 4.4078 L12: -0.8378 REMARK 3 L13: 1.1743 L23: 0.4166 REMARK 3 S TENSOR REMARK 3 S11: 0.1515 S12: -0.3391 S13: -0.4792 REMARK 3 S21: 0.2974 S22: -0.1068 S23: 0.2826 REMARK 3 S31: 0.4120 S32: -0.1497 S33: -0.0044 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1893 THROUGH 1926 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5372 28.1788 0.9411 REMARK 3 T TENSOR REMARK 3 T11: 0.3861 T22: 0.3762 REMARK 3 T33: 0.4495 T12: -0.0186 REMARK 3 T13: -0.0158 T23: 0.1180 REMARK 3 L TENSOR REMARK 3 L11: 2.8371 L22: 8.1858 REMARK 3 L33: 5.3651 L12: -0.3083 REMARK 3 L13: 0.1064 L23: -0.8932 REMARK 3 S TENSOR REMARK 3 S11: 0.1637 S12: -0.2217 S13: -0.7430 REMARK 3 S21: 0.0168 S22: 0.0473 S23: 0.0933 REMARK 3 S31: 0.9312 S32: -0.0630 S33: -0.1366 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1927 THROUGH 1968 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6408 21.8014 7.6672 REMARK 3 T TENSOR REMARK 3 T11: 0.7103 T22: 0.4827 REMARK 3 T33: 0.6829 T12: 0.0849 REMARK 3 T13: -0.1290 T23: 0.1974 REMARK 3 L TENSOR REMARK 3 L11: 5.2830 L22: 4.4792 REMARK 3 L33: 5.3456 L12: 2.2410 REMARK 3 L13: -2.1451 L23: -1.4844 REMARK 3 S TENSOR REMARK 3 S11: -0.0493 S12: -0.5011 S13: -1.0181 REMARK 3 S21: 0.4864 S22: 0.0281 S23: -0.4010 REMARK 3 S31: 0.9540 S32: 0.0244 S33: 0.1239 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8JBY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1300037567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56401 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 92.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 19.90 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 26.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.04 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.21600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES, 9.5%(V/V) PEG 6000, REMARK 280 8.8%(V/V) ETHYLENE GLYCOL, SOAKING THE CRYSTAL WITH 6.25 MM CPD- REMARK 280 2, PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.57933 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 121.15867 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 90.86900 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 151.44833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.28967 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.57933 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 121.15867 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 151.44833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 90.86900 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 30.28967 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1677 REMARK 465 PRO A 1678 REMARK 465 LEU A 1679 REMARK 465 GLY A 1680 REMARK 465 SER A 1681 REMARK 465 PRO A 1682 REMARK 465 GLY A 1683 REMARK 465 ILE A 1684 REMARK 465 GLY B 1677 REMARK 465 PRO B 1678 REMARK 465 LEU B 1679 REMARK 465 GLY B 1680 REMARK 465 SER B 1681 REMARK 465 PRO B 1682 REMARK 465 GLY B 1683 REMARK 465 ILE B 1684 REMARK 465 PRO B 1685 REMARK 465 ASN B 1686 REMARK 465 GLN B 1687 REMARK 465 PHE B 1688 REMARK 465 GLU B 1689 REMARK 465 GLY B 1690 REMARK 465 HIS B 1691 REMARK 465 PHE B 1692 REMARK 465 MET B 1693 REMARK 465 ASP B 1751 REMARK 465 ASP B 1752 REMARK 465 PRO B 1753 REMARK 465 LEU B 1969 REMARK 465 ARG B 1970 REMARK 465 SER B 1971 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1770 58.45 -117.52 REMARK 500 ALA A1856 50.15 -91.14 REMARK 500 CYS A1904 -134.84 -121.96 REMARK 500 VAL A1908 -71.82 -141.46 REMARK 500 VAL A1947 87.18 64.11 REMARK 500 SER B1747 -67.11 -97.84 REMARK 500 ARG B1770 54.10 -113.15 REMARK 500 ASP B1819 -161.30 -113.53 REMARK 500 SER B1894 58.39 -116.80 REMARK 500 CYS B1904 -130.89 -122.38 REMARK 500 VAL B1908 -53.69 -136.26 REMARK 500 VAL B1947 90.36 65.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8JBN RELATED DB: PDB DBREF 8JBY A 1686 1971 UNP P23467 PTPRB_HUMAN 1686 1971 DBREF 8JBY B 1686 1971 UNP P23467 PTPRB_HUMAN 1686 1971 SEQADV 8JBY GLY A 1677 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO A 1678 UNP P23467 EXPRESSION TAG SEQADV 8JBY LEU A 1679 UNP P23467 EXPRESSION TAG SEQADV 8JBY GLY A 1680 UNP P23467 EXPRESSION TAG SEQADV 8JBY SER A 1681 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO A 1682 UNP P23467 EXPRESSION TAG SEQADV 8JBY GLY A 1683 UNP P23467 EXPRESSION TAG SEQADV 8JBY ILE A 1684 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO A 1685 UNP P23467 EXPRESSION TAG SEQADV 8JBY GLY B 1677 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO B 1678 UNP P23467 EXPRESSION TAG SEQADV 8JBY LEU B 1679 UNP P23467 EXPRESSION TAG SEQADV 8JBY GLY B 1680 UNP P23467 EXPRESSION TAG SEQADV 8JBY SER B 1681 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO B 1682 UNP P23467 EXPRESSION TAG SEQADV 8JBY GLY B 1683 UNP P23467 EXPRESSION TAG SEQADV 8JBY ILE B 1684 UNP P23467 EXPRESSION TAG SEQADV 8JBY PRO B 1685 UNP P23467 EXPRESSION TAG SEQRES 1 A 295 GLY PRO LEU GLY SER PRO GLY ILE PRO ASN GLN PHE GLU SEQRES 2 A 295 GLY HIS PHE MET LYS LEU GLN ALA ASP SER ASN TYR LEU SEQRES 3 A 295 LEU SER LYS GLU TYR GLU GLU LEU LYS ASP VAL GLY ARG SEQRES 4 A 295 ASN GLN SER CYS ASP ILE ALA LEU LEU PRO GLU ASN ARG SEQRES 5 A 295 GLY LYS ASN ARG TYR ASN ASN ILE LEU PRO TYR ASP ALA SEQRES 6 A 295 THR ARG VAL LYS LEU SER ASN VAL ASP ASP ASP PRO CYS SEQRES 7 A 295 SER ASP TYR ILE ASN ALA SER TYR ILE PRO GLY ASN ASN SEQRES 8 A 295 PHE ARG ARG GLU TYR ILE VAL THR GLN GLY PRO LEU PRO SEQRES 9 A 295 GLY THR LYS ASP ASP PHE TRP LYS MET VAL TRP GLU GLN SEQRES 10 A 295 ASN VAL HIS ASN ILE VAL MET VAL THR GLN CYS VAL GLU SEQRES 11 A 295 LYS GLY ARG VAL LYS CYS ASP HIS TYR TRP PRO ALA ASP SEQRES 12 A 295 GLN ASP SER LEU TYR TYR GLY ASP LEU ILE LEU GLN MET SEQRES 13 A 295 LEU SER GLU SER VAL LEU PRO GLU TRP THR ILE ARG GLU SEQRES 14 A 295 PHE LYS ILE CYS GLY GLU GLU GLN LEU ASP ALA HIS ARG SEQRES 15 A 295 LEU ILE ARG HIS PHE HIS TYR THR VAL TRP PRO ASP HIS SEQRES 16 A 295 GLY VAL PRO GLU THR THR GLN SER LEU ILE GLN PHE VAL SEQRES 17 A 295 ARG THR VAL ARG ASP TYR ILE ASN ARG SER PRO GLY ALA SEQRES 18 A 295 GLY PRO THR VAL VAL HIS CYS SER ALA GLY VAL GLY ARG SEQRES 19 A 295 THR GLY THR PHE ILE ALA LEU ASP ARG ILE LEU GLN GLN SEQRES 20 A 295 LEU ASP SER LYS ASP SER VAL ASP ILE TYR GLY ALA VAL SEQRES 21 A 295 HIS ASP LEU ARG LEU HIS ARG VAL HIS MET VAL GLN THR SEQRES 22 A 295 GLU CYS GLN TYR VAL TYR LEU HIS GLN CYS VAL ARG ASP SEQRES 23 A 295 VAL LEU ARG ALA ARG LYS LEU ARG SER SEQRES 1 B 295 GLY PRO LEU GLY SER PRO GLY ILE PRO ASN GLN PHE GLU SEQRES 2 B 295 GLY HIS PHE MET LYS LEU GLN ALA ASP SER ASN TYR LEU SEQRES 3 B 295 LEU SER LYS GLU TYR GLU GLU LEU LYS ASP VAL GLY ARG SEQRES 4 B 295 ASN GLN SER CYS ASP ILE ALA LEU LEU PRO GLU ASN ARG SEQRES 5 B 295 GLY LYS ASN ARG TYR ASN ASN ILE LEU PRO TYR ASP ALA SEQRES 6 B 295 THR ARG VAL LYS LEU SER ASN VAL ASP ASP ASP PRO CYS SEQRES 7 B 295 SER ASP TYR ILE ASN ALA SER TYR ILE PRO GLY ASN ASN SEQRES 8 B 295 PHE ARG ARG GLU TYR ILE VAL THR GLN GLY PRO LEU PRO SEQRES 9 B 295 GLY THR LYS ASP ASP PHE TRP LYS MET VAL TRP GLU GLN SEQRES 10 B 295 ASN VAL HIS ASN ILE VAL MET VAL THR GLN CYS VAL GLU SEQRES 11 B 295 LYS GLY ARG VAL LYS CYS ASP HIS TYR TRP PRO ALA ASP SEQRES 12 B 295 GLN ASP SER LEU TYR TYR GLY ASP LEU ILE LEU GLN MET SEQRES 13 B 295 LEU SER GLU SER VAL LEU PRO GLU TRP THR ILE ARG GLU SEQRES 14 B 295 PHE LYS ILE CYS GLY GLU GLU GLN LEU ASP ALA HIS ARG SEQRES 15 B 295 LEU ILE ARG HIS PHE HIS TYR THR VAL TRP PRO ASP HIS SEQRES 16 B 295 GLY VAL PRO GLU THR THR GLN SER LEU ILE GLN PHE VAL SEQRES 17 B 295 ARG THR VAL ARG ASP TYR ILE ASN ARG SER PRO GLY ALA SEQRES 18 B 295 GLY PRO THR VAL VAL HIS CYS SER ALA GLY VAL GLY ARG SEQRES 19 B 295 THR GLY THR PHE ILE ALA LEU ASP ARG ILE LEU GLN GLN SEQRES 20 B 295 LEU ASP SER LYS ASP SER VAL ASP ILE TYR GLY ALA VAL SEQRES 21 B 295 HIS ASP LEU ARG LEU HIS ARG VAL HIS MET VAL GLN THR SEQRES 22 B 295 GLU CYS GLN TYR VAL TYR LEU HIS GLN CYS VAL ARG ASP SEQRES 23 B 295 VAL LEU ARG ALA ARG LYS LEU ARG SER HET U7L A2001 20 HET EDO A2002 4 HET EDO A2003 4 HET EPE A2004 15 HET U7L B9000 20 HET EPE B9001 15 HETNAM U7L 4-(HYDROXYMETHYL)-5-(1-METHYLINDOL-3-YL)-1,2-OXAZOLE-3- HETNAM 2 U7L CARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN EPE HEPES FORMUL 3 U7L 2(C14 H12 N2 O4) FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 EPE 2(C8 H18 N2 O4 S) FORMUL 9 HOH *298(H2 O) HELIX 1 AA1 PRO A 1685 GLU A 1709 1 25 HELIX 2 AA2 LEU A 1724 ASN A 1731 5 8 HELIX 3 AA3 THR A 1782 GLN A 1793 1 12 HELIX 4 AA4 THR A 1876 ASN A 1892 1 17 HELIX 5 AA5 VAL A 1908 SER A 1926 1 19 HELIX 6 AA6 ASP A 1931 ARG A 1943 1 13 HELIX 7 AA7 THR A 1949 LEU A 1969 1 21 HELIX 8 AA8 LEU B 1695 LEU B 1710 1 16 HELIX 9 AA9 ASP B 1720 ASN B 1731 5 12 HELIX 10 AB1 TYR B 1739 ALA B 1741 5 3 HELIX 11 AB2 THR B 1782 GLN B 1793 1 12 HELIX 12 AB3 THR B 1876 ARG B 1893 1 18 HELIX 13 AB4 VAL B 1908 LYS B 1927 1 20 HELIX 14 AB5 ASP B 1931 ARG B 1943 1 13 HELIX 15 AB6 THR B 1949 LYS B 1968 1 20 SHEET 1 AA1 9 ARG A1743 LYS A1745 0 SHEET 2 AA1 9 TYR A1757 ILE A1763 -1 O ALA A1760 N VAL A1744 SHEET 3 AA1 9 TYR A1772 THR A1775 -1 O VAL A1774 N SER A1761 SHEET 4 AA1 9 THR A1900 HIS A1903 1 O VAL A1902 N ILE A1773 SHEET 5 AA1 9 ASN A1797 MET A1800 1 N VAL A1799 O VAL A1901 SHEET 6 AA1 9 ARG A1858 TYR A1865 1 O PHE A1863 N MET A1800 SHEET 7 AA1 9 TRP A1841 GLY A1850 -1 N THR A1842 O HIS A1864 SHEET 8 AA1 9 LEU A1828 VAL A1837 -1 N LEU A1833 O GLU A1845 SHEET 9 AA1 9 LEU A1823 TYR A1825 -1 N TYR A1825 O LEU A1828 SHEET 1 AA2 2 VAL A1805 GLU A1806 0 SHEET 2 AA2 2 ARG A1809 VAL A1810 -1 O ARG A1809 N GLU A1806 SHEET 1 AA3 9 ARG B1743 LYS B1745 0 SHEET 2 AA3 9 TYR B1757 ILE B1763 -1 O ALA B1760 N VAL B1744 SHEET 3 AA3 9 TYR B1772 THR B1775 -1 O VAL B1774 N SER B1761 SHEET 4 AA3 9 THR B1900 HIS B1903 1 O VAL B1902 N ILE B1773 SHEET 5 AA3 9 ASN B1797 MET B1800 1 N VAL B1799 O VAL B1901 SHEET 6 AA3 9 ARG B1858 TYR B1865 1 O PHE B1863 N ILE B1798 SHEET 7 AA3 9 TRP B1841 GLY B1850 -1 N PHE B1846 O ILE B1860 SHEET 8 AA3 9 LEU B1828 VAL B1837 -1 N GLN B1831 O LYS B1847 SHEET 9 AA3 9 LEU B1823 TYR B1825 -1 N LEU B1823 O LEU B1830 SHEET 1 AA4 2 VAL B1805 GLU B1806 0 SHEET 2 AA4 2 ARG B1809 VAL B1810 -1 O ARG B1809 N GLU B1806 CRYST1 123.692 123.692 181.738 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008085 0.004668 0.000000 0.00000 SCALE2 0.000000 0.009335 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005502 0.00000