HEADER TRANSCRIPTION 19-MAY-23 8JFV TITLE CRYSTAL STRUCTURE OF CATABOLITE REPRESSOR ACIVATOR FROM E. COLI IN TITLE 2 COMPLEX WITH SULISOBENZONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATABOLITE REPRESSOR/ACTIVATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI 536; SOURCE 3 ORGANISM_TAXID: 362663; SOURCE 4 GENE: ECP_0082; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSCRIPTION FACTOR, BACTERIAL, SULSIOBENZONE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.NEETU,M.SHARMA,J.K.MAHTO,P.KUMAR REVDAT 1 24-APR-24 8JFV 0 JRNL AUTH N.NEETU,J.K.MAHTO,M.SHARMA,M.KATIKI,P.DHAKA,P.ROY,S.TOMAR, JRNL AUTH 2 A.NARAYAN,D.YERNOOL,P.KUMAR JRNL TITL SULISOBENZONE IS A POTENT INHIBITOR OF THE GLOBAL JRNL TITL 2 TRANSCRIPTION FACTOR CRA. JRNL REF J.STRUCT.BIOL. V. 215 08034 2023 JRNL REFN ESSN 1095-8657 JRNL PMID 37805153 JRNL DOI 10.1016/J.JSB.2023.108034 REMARK 2 REMARK 2 RESOLUTION. 3.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.08 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 10785 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 594 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 773 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.3820 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.3880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4429 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 34 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : 2.03000 REMARK 3 B33 (A**2) : -1.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.561 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.520 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 67.492 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4569 ; 0.002 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4350 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6204 ; 0.765 ; 1.671 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9975 ; 0.277 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 545 ; 5.934 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 53 ; 3.445 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 773 ;14.251 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 685 ; 0.037 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5497 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1111 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2186 ; 1.280 ; 5.327 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2186 ; 1.280 ; 5.327 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2729 ; 2.313 ; 9.580 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2730 ; 2.313 ; 9.579 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2383 ; 0.966 ; 5.527 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2384 ; 0.966 ; 5.527 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3476 ; 1.843 ;10.126 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4827 ; 4.353 ;51.110 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4827 ; 4.353 ;51.110 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 60 A 333 REMARK 3 ORIGIN FOR THE GROUP (A): -21.066 -14.906 9.212 REMARK 3 T TENSOR REMARK 3 T11: 0.0650 T22: 0.0266 REMARK 3 T33: 0.3329 T12: -0.0098 REMARK 3 T13: 0.1121 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 0.5314 L22: 1.9246 REMARK 3 L33: 1.6413 L12: -0.2947 REMARK 3 L13: 0.8289 L23: -0.0222 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.1053 S13: 0.1106 REMARK 3 S21: 0.1771 S22: -0.1196 S23: 0.4622 REMARK 3 S31: -0.0051 S32: 0.1787 S33: 0.1083 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 61 B 333 REMARK 3 ORIGIN FOR THE GROUP (A): -7.419 -39.695 1.426 REMARK 3 T TENSOR REMARK 3 T11: 0.1202 T22: 0.0472 REMARK 3 T33: 0.1639 T12: 0.0466 REMARK 3 T13: -0.0345 T23: -0.0497 REMARK 3 L TENSOR REMARK 3 L11: 0.5552 L22: 1.5096 REMARK 3 L33: 2.3299 L12: 0.0621 REMARK 3 L13: 1.1165 L23: 0.3107 REMARK 3 S TENSOR REMARK 3 S11: 0.1383 S12: 0.0088 S13: 0.0305 REMARK 3 S21: -0.0475 S22: -0.1845 S23: 0.0664 REMARK 3 S31: 0.2308 S32: -0.0039 S33: 0.0462 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8JFV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1300037757. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.973 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER R 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11380 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 43.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 1.800 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.26 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, MGCL2, PEG 4000, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.62050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.47850 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.62050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.47850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 ASP A 4 REMARK 465 GLU A 5 REMARK 465 ILE A 6 REMARK 465 ALA A 7 REMARK 465 ARG A 8 REMARK 465 LEU A 9 REMARK 465 ALA A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 SER A 13 REMARK 465 ARG A 14 REMARK 465 THR A 15 REMARK 465 THR A 16 REMARK 465 ALA A 17 REMARK 465 SER A 18 REMARK 465 TYR A 19 REMARK 465 VAL A 20 REMARK 465 ILE A 21 REMARK 465 ASN A 22 REMARK 465 GLY A 23 REMARK 465 LYS A 24 REMARK 465 ALA A 25 REMARK 465 LYS A 26 REMARK 465 GLN A 27 REMARK 465 TYR A 28 REMARK 465 ARG A 29 REMARK 465 VAL A 30 REMARK 465 SER A 31 REMARK 465 ASP A 32 REMARK 465 LYS A 33 REMARK 465 THR A 34 REMARK 465 VAL A 35 REMARK 465 GLU A 36 REMARK 465 LYS A 37 REMARK 465 VAL A 38 REMARK 465 MET A 39 REMARK 465 ALA A 40 REMARK 465 VAL A 41 REMARK 465 VAL A 42 REMARK 465 ARG A 43 REMARK 465 GLU A 44 REMARK 465 HIS A 45 REMARK 465 ASN A 46 REMARK 465 TYR A 47 REMARK 465 HIS A 48 REMARK 465 PRO A 49 REMARK 465 ASN A 50 REMARK 465 ALA A 51 REMARK 465 VAL A 52 REMARK 465 ALA A 53 REMARK 465 ALA A 54 REMARK 465 GLY A 55 REMARK 465 LEU A 56 REMARK 465 ARG A 57 REMARK 465 ALA A 58 REMARK 465 GLY A 59 REMARK 465 SER A 334 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 LEU B 3 REMARK 465 ASP B 4 REMARK 465 GLU B 5 REMARK 465 ILE B 6 REMARK 465 ALA B 7 REMARK 465 ARG B 8 REMARK 465 LEU B 9 REMARK 465 ALA B 10 REMARK 465 GLY B 11 REMARK 465 VAL B 12 REMARK 465 SER B 13 REMARK 465 ARG B 14 REMARK 465 THR B 15 REMARK 465 THR B 16 REMARK 465 ALA B 17 REMARK 465 SER B 18 REMARK 465 TYR B 19 REMARK 465 VAL B 20 REMARK 465 ILE B 21 REMARK 465 ASN B 22 REMARK 465 GLY B 23 REMARK 465 LYS B 24 REMARK 465 ALA B 25 REMARK 465 LYS B 26 REMARK 465 GLN B 27 REMARK 465 TYR B 28 REMARK 465 ARG B 29 REMARK 465 VAL B 30 REMARK 465 SER B 31 REMARK 465 ASP B 32 REMARK 465 LYS B 33 REMARK 465 THR B 34 REMARK 465 VAL B 35 REMARK 465 GLU B 36 REMARK 465 LYS B 37 REMARK 465 VAL B 38 REMARK 465 MET B 39 REMARK 465 ALA B 40 REMARK 465 VAL B 41 REMARK 465 VAL B 42 REMARK 465 ARG B 43 REMARK 465 GLU B 44 REMARK 465 HIS B 45 REMARK 465 ASN B 46 REMARK 465 TYR B 47 REMARK 465 HIS B 48 REMARK 465 PRO B 49 REMARK 465 ASN B 50 REMARK 465 ALA B 51 REMARK 465 VAL B 52 REMARK 465 ALA B 53 REMARK 465 ALA B 54 REMARK 465 GLY B 55 REMARK 465 LEU B 56 REMARK 465 ARG B 57 REMARK 465 ALA B 58 REMARK 465 GLY B 59 REMARK 465 ARG B 60 REMARK 465 SER B 334 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 130 -9.98 81.86 REMARK 500 ASP A 148 -54.27 77.35 REMARK 500 TRP A 205 32.21 -83.59 REMARK 500 ARG A 260 -96.63 -77.98 REMARK 500 ASP A 267 50.97 -112.27 REMARK 500 GLU A 310 131.46 166.86 REMARK 500 ARG A 312 140.54 79.31 REMARK 500 LEU B 71 46.57 -89.83 REMARK 500 ASN B 139 70.67 -116.98 REMARK 500 ASP B 148 -45.67 65.24 REMARK 500 ALA B 162 57.64 -102.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 149 0.28 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 8JFV A 1 334 UNP A0A454A0X5_ECOL5 DBREF2 8JFV A A0A454A0X5 1 334 DBREF1 8JFV B 1 334 UNP A0A454A0X5_ECOL5 DBREF2 8JFV B A0A454A0X5 1 334 SEQRES 1 A 334 MET LYS LEU ASP GLU ILE ALA ARG LEU ALA GLY VAL SER SEQRES 2 A 334 ARG THR THR ALA SER TYR VAL ILE ASN GLY LYS ALA LYS SEQRES 3 A 334 GLN TYR ARG VAL SER ASP LYS THR VAL GLU LYS VAL MET SEQRES 4 A 334 ALA VAL VAL ARG GLU HIS ASN TYR HIS PRO ASN ALA VAL SEQRES 5 A 334 ALA ALA GLY LEU ARG ALA GLY ARG THR ARG SER ILE GLY SEQRES 6 A 334 LEU VAL ILE PRO ASP LEU GLU ASN THR SER TYR THR ARG SEQRES 7 A 334 ILE ALA ASN TYR LEU GLU ARG GLN ALA ARG GLN ARG GLY SEQRES 8 A 334 TYR GLN LEU LEU ILE ALA CYS SER GLU ASP GLN PRO ASP SEQRES 9 A 334 ASN GLU MET ARG CYS ILE GLU HIS LEU LEU GLN ARG GLN SEQRES 10 A 334 VAL ASP ALA ILE ILE VAL SER THR SER LEU PRO PRO GLU SEQRES 11 A 334 HIS PRO PHE TYR GLN ARG TRP ALA ASN ASP PRO PHE PRO SEQRES 12 A 334 ILE VAL ALA LEU ASP ARG ALA LEU ASP ARG GLU HIS PHE SEQRES 13 A 334 THR SER VAL VAL GLY ALA ASP GLN ASP ASP ALA GLU MET SEQRES 14 A 334 LEU ALA GLU GLU LEU ARG LYS PHE PRO ALA GLU THR VAL SEQRES 15 A 334 LEU TYR LEU GLY ALA LEU PRO GLU LEU SER VAL SER PHE SEQRES 16 A 334 LEU ARG GLU GLN GLY PHE ARG THR ALA TRP LYS ASP ASP SEQRES 17 A 334 PRO ARG GLU VAL HIS PHE LEU TYR ALA ASN SER TYR GLU SEQRES 18 A 334 ARG GLU ALA ALA ALA GLN LEU PHE GLU LYS TRP LEU GLU SEQRES 19 A 334 THR HIS PRO MET PRO GLN ALA LEU PHE THR THR SER PHE SEQRES 20 A 334 ALA LEU LEU GLN GLY VAL MET ASP VAL THR LEU ARG ARG SEQRES 21 A 334 ASP GLY LYS LEU PRO SER ASP LEU ALA ILE ALA THR PHE SEQRES 22 A 334 GLY ASP ASN GLU LEU LEU ASP PHE LEU GLN CYS PRO VAL SEQRES 23 A 334 LEU ALA VAL ALA GLN ARG HIS ARG ASP VAL ALA GLU ARG SEQRES 24 A 334 VAL LEU GLU ILE VAL LEU ALA SER LEU ASP GLU PRO ARG SEQRES 25 A 334 LYS PRO LYS PRO GLY LEU THR ARG ILE LYS ARG ASN LEU SEQRES 26 A 334 TYR ARG ARG GLY VAL LEU SER ARG SER SEQRES 1 B 334 MET LYS LEU ASP GLU ILE ALA ARG LEU ALA GLY VAL SER SEQRES 2 B 334 ARG THR THR ALA SER TYR VAL ILE ASN GLY LYS ALA LYS SEQRES 3 B 334 GLN TYR ARG VAL SER ASP LYS THR VAL GLU LYS VAL MET SEQRES 4 B 334 ALA VAL VAL ARG GLU HIS ASN TYR HIS PRO ASN ALA VAL SEQRES 5 B 334 ALA ALA GLY LEU ARG ALA GLY ARG THR ARG SER ILE GLY SEQRES 6 B 334 LEU VAL ILE PRO ASP LEU GLU ASN THR SER TYR THR ARG SEQRES 7 B 334 ILE ALA ASN TYR LEU GLU ARG GLN ALA ARG GLN ARG GLY SEQRES 8 B 334 TYR GLN LEU LEU ILE ALA CYS SER GLU ASP GLN PRO ASP SEQRES 9 B 334 ASN GLU MET ARG CYS ILE GLU HIS LEU LEU GLN ARG GLN SEQRES 10 B 334 VAL ASP ALA ILE ILE VAL SER THR SER LEU PRO PRO GLU SEQRES 11 B 334 HIS PRO PHE TYR GLN ARG TRP ALA ASN ASP PRO PHE PRO SEQRES 12 B 334 ILE VAL ALA LEU ASP ARG ALA LEU ASP ARG GLU HIS PHE SEQRES 13 B 334 THR SER VAL VAL GLY ALA ASP GLN ASP ASP ALA GLU MET SEQRES 14 B 334 LEU ALA GLU GLU LEU ARG LYS PHE PRO ALA GLU THR VAL SEQRES 15 B 334 LEU TYR LEU GLY ALA LEU PRO GLU LEU SER VAL SER PHE SEQRES 16 B 334 LEU ARG GLU GLN GLY PHE ARG THR ALA TRP LYS ASP ASP SEQRES 17 B 334 PRO ARG GLU VAL HIS PHE LEU TYR ALA ASN SER TYR GLU SEQRES 18 B 334 ARG GLU ALA ALA ALA GLN LEU PHE GLU LYS TRP LEU GLU SEQRES 19 B 334 THR HIS PRO MET PRO GLN ALA LEU PHE THR THR SER PHE SEQRES 20 B 334 ALA LEU LEU GLN GLY VAL MET ASP VAL THR LEU ARG ARG SEQRES 21 B 334 ASP GLY LYS LEU PRO SER ASP LEU ALA ILE ALA THR PHE SEQRES 22 B 334 GLY ASP ASN GLU LEU LEU ASP PHE LEU GLN CYS PRO VAL SEQRES 23 B 334 LEU ALA VAL ALA GLN ARG HIS ARG ASP VAL ALA GLU ARG SEQRES 24 B 334 VAL LEU GLU ILE VAL LEU ALA SER LEU ASP GLU PRO ARG SEQRES 25 B 334 LYS PRO LYS PRO GLY LEU THR ARG ILE LYS ARG ASN LEU SEQRES 26 B 334 TYR ARG ARG GLY VAL LEU SER ARG SER HET I4Y A 401 21 HET PO4 A 402 5 HET EPE A 403 15 HET EDO B 401 4 HETNAM I4Y 2-METHOXY-4-OXIDANYL-5-(PHENYLCARBONYL)BENZENESULFONIC HETNAM 2 I4Y ACID HETNAM PO4 PHOSPHATE ION HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN EPE HEPES HETSYN EDO ETHYLENE GLYCOL FORMUL 3 I4Y C14 H12 O6 S FORMUL 4 PO4 O4 P 3- FORMUL 5 EPE C8 H18 N2 O4 S FORMUL 6 EDO C2 H6 O2 FORMUL 7 HOH *34(H2 O) HELIX 1 AA1 ASN A 73 GLY A 91 1 19 HELIX 2 AA2 GLN A 102 ARG A 116 1 15 HELIX 3 AA3 HIS A 131 ARG A 136 5 6 HELIX 4 AA4 ALA A 162 ARG A 175 1 14 HELIX 5 AA5 LEU A 191 TRP A 205 1 15 HELIX 6 AA6 GLU A 221 GLU A 234 1 14 HELIX 7 AA7 SER A 246 GLY A 262 1 17 HELIX 8 AA8 ASN A 276 LEU A 282 5 7 HELIX 9 AA9 ARG A 292 ASP A 309 1 18 HELIX 10 AB1 ASN B 73 ARG B 88 1 16 HELIX 11 AB2 GLN B 89 GLY B 91 5 3 HELIX 12 AB3 GLN B 102 GLN B 115 1 14 HELIX 13 AB4 PHE B 133 TRP B 137 5 5 HELIX 14 AB5 ALA B 162 LYS B 176 1 15 HELIX 15 AB6 LEU B 191 TRP B 205 1 15 HELIX 16 AB7 GLU B 221 HIS B 236 1 16 HELIX 17 AB8 SER B 246 GLY B 262 1 17 HELIX 18 AB9 ASN B 276 LEU B 282 5 7 HELIX 19 AC1 ARG B 292 ASP B 309 1 18 HELIX 20 AC2 LEU B 331 ARG B 333 5 3 SHEET 1 AA1 6 GLN A 93 CYS A 98 0 SHEET 2 AA1 6 SER A 63 ILE A 68 1 N LEU A 66 O ALA A 97 SHEET 3 AA1 6 ALA A 120 VAL A 123 1 O ALA A 120 N GLY A 65 SHEET 4 AA1 6 ILE A 144 LEU A 147 1 O LEU A 147 N VAL A 123 SHEET 5 AA1 6 THR A 157 GLY A 161 1 O VAL A 159 N ALA A 146 SHEET 6 AA1 6 GLY A 317 ILE A 321 1 O GLY A 317 N SER A 158 SHEET 1 AA2 6 VAL A 212 ALA A 217 0 SHEET 2 AA2 6 VAL A 182 ALA A 187 1 N TYR A 184 O LEU A 215 SHEET 3 AA2 6 ALA A 241 THR A 244 1 O PHE A 243 N LEU A 185 SHEET 4 AA2 6 ALA A 269 PHE A 273 1 O ALA A 269 N LEU A 242 SHEET 5 AA2 6 PRO A 285 ALA A 290 1 O LEU A 287 N THR A 272 SHEET 6 AA2 6 ASN A 324 GLY A 329 -1 O ASN A 324 N ALA A 290 SHEET 1 AA3 6 GLN B 93 CYS B 98 0 SHEET 2 AA3 6 SER B 63 ILE B 68 1 N ILE B 64 O GLN B 93 SHEET 3 AA3 6 ALA B 120 VAL B 123 1 O ILE B 122 N GLY B 65 SHEET 4 AA3 6 ILE B 144 LEU B 147 1 O VAL B 145 N VAL B 123 SHEET 5 AA3 6 THR B 157 GLY B 161 1 O VAL B 159 N ALA B 146 SHEET 6 AA3 6 GLY B 317 ILE B 321 1 O GLY B 317 N SER B 158 SHEET 1 AA4 6 VAL B 212 ALA B 217 0 SHEET 2 AA4 6 VAL B 182 ALA B 187 1 N TYR B 184 O LEU B 215 SHEET 3 AA4 6 ALA B 241 THR B 244 1 O PHE B 243 N LEU B 185 SHEET 4 AA4 6 ALA B 269 PHE B 273 1 O ALA B 271 N THR B 244 SHEET 5 AA4 6 PRO B 285 ALA B 290 1 O PRO B 285 N ILE B 270 SHEET 6 AA4 6 ASN B 324 GLY B 329 -1 O ASN B 324 N ALA B 290 CRYST1 43.043 109.241 122.957 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023233 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009154 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008133 0.00000